基因页:Kat5
Summary?
基因ID | 10524 |
Symbol | Kat5 |
同义词 | ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 |
描述 | lysine acetyltransferase 5 |
参考 | MIM:601409|HGNC:HGNC:5275|ENSEMBL:ENSG00000172977|HPRD:03245|Vega:Otthumg00000166617 |
基因type | protein-coding |
地图位置 | 11q13 |
Pascal P值 | 0.006 |
度p-value | DEG:Maycox_2009:cc_ba10_fold_change = -1.05:cc_ba10_disease_p = 0.0415:hbb_ba9_fold_change = -1.12:hbb_ba9_disease_p = 0.0352 |
Fetal beta | 0.164 |
支持 | 染色质重塑基因 |
基因数据来源
基因set name | 基因组方法 | 描述 | Info |
---|---|---|---|
简历:PGCNP | 全基因组协会研究 | GWAS | |
度:Maycox_2009 | 微阵列确定验尸后30000多个mRNA转录本的表达 | We included 51 genes whose expression changes are common between two schizophrenia cohorts. | |
网络 | 人蛋白蛋白质相互作用网络中核心基因的最短路径距离 | Contribution to shortest path in PPI network: 0.8537 |
第一节遗传学和表观遗传学注释
Section II. Transcriptome annotation
基因ral gene expression (GTEx)
![无法使用](http://www.tjghsg.com/bioinfo/SZGR/GeneImg/KAT5_DE_GTEx.png)
Devlopment期间的基因表达(BrainCloud)
脚注:
总共绘制了269个时间点,n = 38个胎儿样品(x = 1:38)。每个三角形代表一个时间点。
基因expression of temporal and spatial changes (BrainSpan)
脚注:
SC:亚皮质区域;SM:感觉运动区域;FC:额叶皮层;和TP:颞顶皮层
ST1:胎儿(13-26个概念后周),ST2:婴儿早期至童年(4个月至11年)和ST3:青春期至成年期(13-23年)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
前10个积极共表达的基因 | ||
基因 | 皮尔逊的相关性 | 斯皮尔曼的相关性 |
VBP1 | 0.89 | 0.87 |
PSMD10 | 0.86 | 0.86 |
PSMD14 | 0.86 | 0.85 |
FH | 0.86 | 0.84 |
GTF2B | 0.85 | 0.85 |
TCEAL8 | 0.85 | 0.82 |
是的 | 0.85 | 0.85 |
eapp | 0.85 | 0.86 |
DRG1 | 0.85 | 0.84 |
MORF4L1 | 0.85 | 0.87 |
前10个负共表达基因 | ||
基因 | 皮尔逊的相关性 | 斯皮尔曼的相关性 |
MT-CO2 | -0.61 | -0.57 |
AF347015.8 | -0.60 | -0.56 |
AF347015.2 | -0.60 | -0.60 |
AF347015.26 | -0.59 | -0.59 |
AF347015.33 | -0.59 | -0.57 |
MT-CYB | -0.58 | -0.56 |
TINAGL1 | -0.58 | -0.62 |
ifi27 | -0.57 | -0.62 |
USHBP1 | -0.57 | -0.62 |
AF347015.15 | -0.57 | -0.57 |
Section III. Gene Ontology annotation
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
---|---|---|---|---|
GO:0003682 | 染色质binding | IEA | - | |
去:0003713 | transcription coactivator activity | NAS | 15572661 | |
GO:0005515 | protein binding | IPI | 15383276|16169070|17110330 |
|
GO:0004402 | histone acetyltransferase activity | IEA | - | |
GO:0016740 | transferase activity | IEA | - | |
去:0008270 | 锌离子结合 | IEA | - | |
GO:0008415 | acyltransferase activity | IEA | - | |
GO:0046872 | 金属离子结合 | IEA | - | |
GO:0050681 | 雄激素受体结合 | NAS | 15572661 | |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
去:0001558 | regulation of cell growth | IEA | - | |
GO:0006302 | double-strand break repair | 小鬼 | 10966108 | |
GO:0006333 | 染色质组装或拆卸 | IEA | - | |
GO:0006350 | transcription | IEA | - | |
GO:0006366 | transcription from RNA polymerase II promoter | 塔斯 | 8607265 | |
GO:0016568 | 染色质修饰 | IEA | - | |
GO:0016573 | histone acetylation | 艾达 | 10966108 | |
GO:0030521 | androgen receptor signaling pathway | NAS | 15572661 | |
GO:0045893 | positive regulation of transcription, DNA-dependent | NAS | 15572661 | |
GO:0044419 | 生物之间的种间相互作用 | IEA | - | |
细胞分量 | GO term | Evidence | Neuro keywords | PubMed ID |
GO:0000785 | 染色质 | IEA | - | |
GO:0005634 | 核 | 塔斯 | 8607265 | |
GO:0005737 | 细胞质 | IEA | - | |
GO:0035267 | NuA4 histone acetyltransferase complex | 艾达 | 10966108 |
第四节。蛋白质蛋白相互作用注释
Interactors | Aliases B | Official full name B | Experimental | 资源 | PubMed ID |
---|---|---|---|---|---|
ACTL6A | actl6 |arp4 |BAF53A |INO80K |MGC5382 | actin-like 6A | Co-fractionation | BioGRID | 11839798 |
APBB1 | FE65 |MGC:9072 |里尔 | amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) | - | HPRD | 12888553 |
APP | AAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN2 | amyloid beta (A4) precursor protein | - | HPRD | 12888553 |
AR | AIS |DHTR |Humara |KD |NR3C4 |SBMA |smax1 |TFM | androgen receptor | Biochemical Activity 2台混合动力 |
BioGRID | 11994312 |
AR | AIS |DHTR |Humara |KD |NR3C4 |SBMA |smax1 |TFM | androgen receptor | - | HPRD | 10364196 |
Arih2 | ARI2 | FLJ10938 | FLJ33921 | TRIAD1 | Ariadne同源2(果蝇) | 2台混合动力 | BioGRID | 16169070 |
BCL3 | bcl4 |D19S37 | B-cell CLL/lymphoma 3 | - | HPRD,Biogrid | 10362352 |
BCL3 | bcl4 |D19S37 | B-cell CLL/lymphoma 3 | HTATIP (Tip60) interacts with BCL3. | BIND | 15829968 |
BMI1 | MGC12685 |PCGF4 |RNF51 | BMI1polycomb ring finger oncogene | 2台混合动力 | BioGRID | 16169070 |
C1orf174 | RP13-531C17.2 | chromosome 1 open reading frame 174 | 2台混合动力 | BioGRID | 16169070 |
C20ORF20 | Eaf7 | FLJ10914 | MRG15BP | MRGBP | URCC4 | 染色体20开放阅读框20 | - | HPRD | 12963728 |
C7orf20 | CEE | CGI-20 | 染色体7开放阅读框20 | 2台混合动力 | BioGRID | 16169070 |
CBX8 | HPC3 |PC3 |RC1 | Chromobox同源物8(PC类同源物,果蝇) | 2台混合动力 | BioGRID | 16169070 |
CCDC106 | HSU79303 |ZNF581 | 包含106 | 2台混合动力 | BioGRID | 16169070 |
CCT7 | CCT-ETA | Ccth | MGC110985 | Nip7-1 | TCP-1-eta | chaperonin containing TCP1, subunit 7 (eta) | 2台混合动力 | BioGRID | 16169070 |
CD82 | 4f9 |C33 |Gr15 |IA4 |kai1 |R2 |SAR2 |ST6 |TSPAN27 | CD82molecule | HTATIP(TIP60)与CD82(KAI1)启动子相互作用。 | BIND | 15829968 |
CDC42 | cdc42hs |G25K | 细胞分裂周期42(GTP结合蛋白,25KDA) | 2台混合动力 | BioGRID | 16169070 |
CDK5RAP2 | C48 | Cep215 | DKFZp686B1070 | DKFZp686D1070 | KIAA1633 | MCPH3 | CDK5调节亚基相关蛋白2 | 2台混合动力 | BioGRID | 16169070 |
CREB1 | Creb |MGC9284 | cAMP responsive element binding protein 1 | - | HPRD,Biogrid | 10720489 |
Creld1 | AVSD2 |Cirrin |DKFZP566D213 | 具有EGF样域1的半胱氨酸富含半胱氨酸 | 2台混合动力 | BioGRID | 16169070 |
CSTF2 | CSTF-64 | cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa | 2台混合动力 | BioGRID | 16169070 |
DLEU1 | BCMS |DLB1 |dleu2 |leu1 |Leu2 |MGC22430 |NCRNA00021 |XTP6 | 在淋巴细胞性白血病1(非蛋白质编码)中删除 | 2台混合动力 | BioGRID | 16169070 |
埃德拉 | ETA | ETRA | 内皮素受体A型 | Affinity Capture-Western Reconstituted Complex 2台混合动力 |
BioGRID | 11262386 |
EFNA1 | B61 |Ecklg |efl1 |eplg1 |lerk1 |TNFAIP4 | ephrin-A1 | 2台混合动力 | BioGRID | 16169070 |
EP400 | CAGH32 | DKFZP434I225 | FLJ42018 | FLJ45115 | P400 | TNRC12 | E1A binding protein p400 | Affinity Capture-Western | BioGRID | 11509179 |
ETV6 | 电话|电话/abl | ETS变体6 | - | HPRD,Biogrid | 12737628 |
FAM101B | MGC45871 | family with sequence similarity 101, member B | 2台混合动力 | BioGRID | 16169070 |
FAM135B | C8ORFK32 | MGC126009 | MGC126010 | MGC33221 | 具有序列相似性的家庭135,成员b | 2台混合动力 | BioGRID | 16169070 |
FAM173A | C16orf24 |MGC2494 | 具有序列相似性的家庭173,成员a | 2台混合动力 | BioGRID | 16169070 |
fas | ALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6 | FAS(TNF受体超家族,成员6) | HTATIP(TIP60)与FAS启动子相互作用。 | BIND | 15829968 |
双子座7 | SIP3 | 宝石(核管细胞器)相关蛋白7 | 2台混合动力 | BioGRID | 16169070 |
grin1 | NMDA1 |NMDAR1 |NR1 | glutamate receptor, ionotropic, N-methyl D-aspartate 1 | - | HPRD | 10862698 |
GSTO1 | DKFZp686H13163 | GSTTLp28 | P28 | 谷胱甘肽S-转移酶欧米茄1 | 2台混合动力 | BioGRID | 16169070 |
HDAC1 | DKFZP686H12203 |gon-10 |HD1 |RPD3 |RPD3L1 | 组蛋白脱乙酰基酶1 | - | HPRD | 11994312 |
HDAC7 | DKFZp586J0917 | FLJ99588 | HD7A | HDAC7A | 组蛋白脱乙酰基酶7 | Affinity Capture-Western 2台混合动力 |
BioGRID | 12551922 |
hnrnph3 | 2H9 |FLJ34092 |HNRPH3 | heterogeneous nuclear ribonucleoprotein H3 (2H9) | 2台混合动力 | BioGRID | 16169070 |
IK | CSA2 |MGC59741 |红色的 | IK Cytokine,HLA II的下调剂 | 2台混合动力 | BioGRID | 16169070 |
Kat5 | esa1 |htatip |htatip1 |plip |提示|TIP60 |CPLA2 | K(lysine) acetyltransferase 5 | Affinity Capture-Western | BioGRID | 11416127 |
KLK3 | APS |KLK2A1 |PSA |HK3 | Kallikrein相关肽酶3 | HTATIP (Tip60) interacts with the KLK3 (PSA) promoter. | BIND | 15829968 |
LMNA | cdcd1 |CDDC |cmd1a |CMT2B1 |emd2 |fpl |fpld |HGPS |IDC |LDP1 | LFP | LGMD1B | LMN1 | LMNC | PRO1 | lamin A/C | 2台混合动力 | BioGRID | 16169070 |
LRP1 | A2MR | APOER | APR | CD91 | FLJ16451 | IGFBP3R | LRP | MGC88725 | TGFBR5 | 低密度脂蛋白相关蛋白1(Alpha-2-巨球蛋白受体) | - | HPRD,Biogrid | 12888553 |
MAD2L1BP | CMT2 | KIAA0110 | MGC11282 | RP1-261G23.6 | MAD2L1结合蛋白 | 2台混合动力 | BioGRID | 16169070 |
MDM2 | HDMX |MGC71221 |HDM2 | MDM2 p53结合蛋白同源物(小鼠) | - | HPRD,Biogrid | 11927554 |
MYC | bHLHe39 | c-Myc | v-myc myelocytomatosis viral oncogene homolog (avian) | - | HPRD,Biogrid | 12776177 |
NAP1L5 | DRLM | nucleosome assembly protein 1-like 5 | 2台混合动力 | BioGRID | 16169070 |
NDUFA4L2 | FLJ26118 | NUOMS | NADH脱氢酶(泛氨基酮)1α子复杂,4类样2 | 2台混合动力 | BioGRID | 16169070 |
NDUFV2 | - | NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa | 2台混合动力 | BioGRID | 16169070 |
NFKB1 | DKFZp686C01211 | EBP-1 | KBF1 | MGC54151 | NF-kappa-B | NFKB-p105 | NFKB-p50 | p105 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 | HTATIP (Tip60) interacts with NFKB1 (p50). | BIND | 15829968 |
OGFOD2 | DKFZp686H15154 | FLJ13491 | FLJ37501 | MGC120434 | MGC120436 | 2-氧气谷物和铁依赖性氧酶结构域,含有2个 | 2台混合动力 | BioGRID | 16169070 |
PDCD5 | MGC9294 |TFAR19 | programmed cell death 5 | 2台混合动力 | BioGRID | 16169070 |
PLA2G4A | MGC126350 |pla2g4 |cpla2-alpha | 磷脂酶A2,IVA组(胞质,钙依赖性) | - | HPRD,Biogrid | 11416127 |
Plekha4 | PEPP1 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 | 2台混合动力 | BioGRID | 16169070 |
POLE2 | DPE2 | 聚合酶(指向DNA),Epsilon 2(P59亚基) | 2台混合动力 | BioGRID | 16169070 |
POLR3F | MGC13517 |RPC39 |RPC6 | 聚合酶(RNA)III(定向DNA)多肽F,39 kDa | 2台混合动力 | BioGRID | 16169070 |
PTPN4 | PTPMEG | PTPMEG1 | 蛋白质酪氨酸磷酸酶,non-receptor类型4(megakaryocyte) | 2台混合动力 | BioGRID | 16169070 |
PTPR | PTPSIGMA | protein tyrosine phosphatase, receptor type, S | 2台混合动力 | BioGRID | 16169070 |
RGL2 | HKE1.5 |ke1.5 |rab2l | 拉尔鸟嘌呤核苷酸解离刺激器样2 | 2台混合动力 | BioGRID | 16169070 |
RUVBL1 | ECP54 | INO80H | NMP238 | PONTIN | Pontin52 | RVB1 | TIH1 | TIP49 | TIP49A | ruvb样1(大肠杆菌) | HTATIP(TIP60)与RUVBL1(Pontin)相互作用。 | BIND | 15829968 |
SAT1 | DC21 | KFSD | SAT | SSAT | SSAT-1 | spermidine/spermine N1-acetyltransferase 1 | 2台混合动力 | BioGRID | 16169070 |
SNAPIN | 快照 | SNAP-associated protein | 2台混合动力 | BioGRID | 16169070 |
SNRPD2 | SMD2 | SNRPD1 | small nuclear ribonucleoprotein D2 polypeptide 16.5kDa | 2台混合动力 | BioGRID | 16169070 |
STAT3 | APRF |FLJ20882 |hies |MGC16063 | signal transducer and activator of transcription 3 (acute-phase response factor) | - | HPRD,Biogrid | 12551922 |
SYN1 | SYN1a | SYN1b | SYNI | synapsin I | 2台混合动力 | BioGRID | 16169070 |
部落3 | C20orf97 |nipk |水槽|Skip3 |TRB3 | tribbles homolog 3 (Drosophila) | 2台混合动力 | BioGRID | 16169070 |
ZEB1 | areb6 |BZP |delta-ef1 |MGC133261 |nil-2-a |nil-2a |nil2a |TCF8 |Zeb |ZFHEP | ZFHX1A | zinc finger E-box binding homeobox 1 | - | HPRD,Biogrid | 11275565 |
ZNF24 | KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191 | zinc finger protein 24 | 2台混合动力 | BioGRID | 16169070 |
V.途径注释
Pathway name | Pathway size | #szgr 2.0基因 | Info |
---|---|---|---|
ST ERK1 ERK2 MAPK PATHWAY | 32 | 25 | 该途径中的所有SZGR 2.0基因 |
St Myocyte广告路径 | 27 | 25 | 该途径中的所有SZGR 2.0基因 |
PID P73Pathway | 79 | 59 | 该途径中的所有SZGR 2.0基因 |
PID MYC活动途径 | 79 | 62 | 该途径中的所有SZGR 2.0基因 |
PID ATM PATHWAY | 34 | 25 | 该途径中的所有SZGR 2.0基因 |
PID MYC PATHWAY | 25 | 22 | 该途径中的所有SZGR 2.0基因 |
PID AR TF PATHWAY | 53 | 38 | 该途径中的所有SZGR 2.0基因 |
PID ATF2途径 | 59 | 43 | 该途径中的所有SZGR 2.0基因 |
PID P53 REGULATION PATHWAY | 59 | 50 | 该途径中的所有SZGR 2.0基因 |
Wang LMO4靶向DN | 352 | 225 | 该途径中的所有SZGR 2.0基因 |
多德鼻咽癌 | 1821年 | 933 | 该途径中的所有SZGR 2.0基因 |
马丁与HDAC互动 | 44 | 31 | 该途径中的所有SZGR 2.0基因 |
MYC增强的Schlosser血清反应 | 108 | 74 | 该途径中的所有SZGR 2.0基因 |
SPIELMAN LYMPHOBLAST EUROPEAN VS ASIAN UP | 479 | 299 | 该途径中的所有SZGR 2.0基因 |
THEILGAARD NEUTROPHIL AT SKIN WOUND UP | 77 | 52 | 该途径中的所有SZGR 2.0基因 |
葡萄病毒感染的Debiasi凋亡 | 314 | 201 | 该途径中的所有SZGR 2.0基因 |
KAYO CALORIE RESTRICTION MUSCLE DN | 87 | 59 | 该途径中的所有SZGR 2.0基因 |
welcsh brca1靶向 | 198 | 132 | 该途径中的所有SZGR 2.0基因 |
道格拉斯BMI1靶向 | 566 | 371 | 该途径中的所有SZGR 2.0基因 |
CHANDRAN METASTASIS DN | 306 | 191 | 该途径中的所有SZGR 2.0基因 |