Gene Page:HNRNPUL1
Summary?
| GeneID | 11100 |
| Symbol | HNRNPUL1 |
| Synonyms | E1B-AP5|E1BAP5|HNRPUL1 |
| Description | heterogeneous nuclear ribonucleoprotein U-like 1 |
| Reference | MIM:605800|HGNC:HGNC:17011|Ensembl:ENSG00000105323|HPRD:10428|Vega:OTTHUMG00000182740 |
| Gene type | protein-coding |
| Map location | 19q13.2 |
| Pascal p-value | 0.041 |
| Sherlock p-value | 0.979 |
| eGene | 元 |
| Support | CompositeSet Darnell FMRP targets |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
死神:胎儿(13 - 26 postconception一周s), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| PTPRR | 0.86 | 0.88 |
| OXCT1 | 0.85 | 0.88 |
| CALM1 | 0.85 | 0.86 |
| ARHGEF3 | 0.85 | 0.89 |
| MYRIP | 0.85 | 0.87 |
| RIMS1 | 0.84 | 0.89 |
| HPCAL4 | 0.83 | 0.87 |
| CALM3 | 0.83 | 0.85 |
| USP12 | 0.83 | 0.84 |
| RAB6B | 0.83 | 0.89 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| RAB34 | -0.43 | -0.46 |
| AF347015.21 | -0.43 | -0.26 |
| AF347015.18 | -0.42 | -0.28 |
| AC098691.2 | -0.42 | -0.40 |
| AP002478.3 | -0.41 | -0.38 |
| CLEC3B | -0.41 | -0.45 |
| IMPA2 | -0.41 | -0.46 |
| RAB13 | -0.40 | -0.48 |
| EIF4EBP3 | -0.40 | -0.40 |
| MYLK2 | -0.40 | -0.40 |
Section IV. Protein-protein interaction annotation
| Interactors | Aliases B | Official full name B | Experimental | Source | PubMed ID |
|---|---|---|---|---|---|
| BRD7 | BP75 | CELTIX1 | NAG4 | bromodomain containing 7 | - | HPRD,BioGRID | 12489984 |
| C14orf1 | ERG28 | NET51 | chromosome 14 open reading frame 1 | Two-hybrid | BioGRID | 16169070 |
| CNBP | CNBP1 | DM2 | FLJ11631 | PROMM | RNF163 | ZCCHC22 | ZNF9 | CCHC-type zinc finger, nucleic acid binding protein | Affinity Capture-MS | BioGRID | 17353931 |
| CRMP1 | DPYSL1 | DRP-1 | DRP1 | collapsin response mediator protein 1 | Two-hybrid | BioGRID | 16169070 |
| MED31 | 3110004H13Rik | CGI-125 | FLJ27436 | FLJ36714 | Soh1 | mediator complex subunit 31 | Two-hybrid | BioGRID | 16169070 |
| NXF1 | DKFZp667O0311 | MEX67 | TAP | nuclear RNA export factor 1 | - | HPRD | 10668806 |
| NXF2 | FLJ20416 | TAPL-2 | nuclear RNA export factor 2 | - | HPRD | 11073998 |
| NXF3 | - | nuclear RNA export factor 3 | - | HPRD | 11073998 |
| POLR1E | FLJ13390 | FLJ13970 | PAF53 | PRAF1 | RP11-405L18.3 | polymerase (RNA) I polypeptide E, 53kDa | Affinity Capture-MS | BioGRID | 17353931 |
| PRMT1 | ANM1 | HCP1 | HRMT1L2 | IR1B4 | protein arginine methyltransferase 1 | Biochemical Activity | BioGRID | 11513728 |
| PRMT2 | HRMT1L1 | MGC111373 | protein arginine methyltransferase 2 | - | HPRD,BioGRID | 11513728 |
| PRPF40A | FBP-11 | FBP11 | FLAF1 | FLJ20585 | FNBP3 | HIP10 | HYPA | NY-REN-6 | PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) | Two-hybrid | BioGRID | 16169070 |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA | 140 | 77 | All SZGR 2.0 genes in this pathway |
| REACTOME MRNA PROCESSING | 161 | 86 | All SZGR 2.0 genes in this pathway |
| REACTOME MRNA SPLICING | 111 | 58 | All SZGR 2.0 genes in this pathway |
| GARY CD5 TARGETS UP | 473 | 314 | All SZGR 2.0 genes in this pathway |
| HUTTMANN B CLL POOR SURVIVAL UP | 276 | 187 | All SZGR 2.0 genes in this pathway |
| WANG LMO4 TARGETS UP | 372 | 227 | All SZGR 2.0 genes in this pathway |
| MULLIGHAN MLL SIGNATURE 2 UP | 418 | 263 | All SZGR 2.0 genes in this pathway |
| KIM WT1 TARGETS 8HR UP | 164 | 122 | All SZGR 2.0 genes in this pathway |
| MAYBURD RESPONSE TO L663536 UP | 29 | 18 | All SZGR 2.0 genes in this pathway |
| TOMIDA METASTASIS UP | 26 | 13 | All SZGR 2.0 genes in this pathway |
| PUJANA BRCA1 PCC NETWORK | 1652 | 1023 | All SZGR 2.0 genes in this pathway |
| PUJANA BRCA2 PCC NETWORK | 423 | 265 | All SZGR 2.0 genes in this pathway |
| BENPORATH NANOG TARGETS | 988 | 594 | All SZGR 2.0 genes in this pathway |
| BENPORATH SOX2 TARGETS | 734 | 436 | All SZGR 2.0 genes in this pathway |
| BENPORATH MYC MAX TARGETS | 775 | 494 | All SZGR 2.0 genes in this pathway |
| LIN APC TARGETS | 77 | 55 | All SZGR 2.0 genes in this pathway |
| NING CHRONIC OBSTRUCTIVE PULMONARY DISEASE UP | 157 | 105 | All SZGR 2.0 genes in this pathway |
| THEILGAARD NEUTROPHIL AT SKIN WOUND DN | 225 | 163 | All SZGR 2.0 genes in this pathway |
| BLALOCK ALZHEIMERS DISEASE INCIPIENT UP | 390 | 242 | All SZGR 2.0 genes in this pathway |
| BLALOCK ALZHEIMERS DISEASE UP | 1691 | 1088 | All SZGR 2.0 genes in this pathway |
| DOUGLAS BMI1 TARGETS UP | 566 | 371 | All SZGR 2.0 genes in this pathway |
| MARSON BOUND BY FOXP3 STIMULATED | 1022 | 619 | All SZGR 2.0 genes in this pathway |
| MARSON BOUND BY FOXP3 UNSTIMULATED | 1229 | 713 | All SZGR 2.0 genes in this pathway |
| MARSON BOUND BY E2F4 UNSTIMULATED | 728 | 415 | All SZGR 2.0 genes in this pathway |
| HELLER HDAC TARGETS SILENCED BY METHYLATION DN | 281 | 179 | All SZGR 2.0 genes in this pathway |
| TOYOTA TARGETS OF MIR34B AND MIR34C | 463 | 262 | All SZGR 2.0 genes in this pathway |
| HAN SATB1 TARGETS UP | 395 | 249 | All SZGR 2.0 genes in this pathway |
| DANG BOUND BY MYC | 1103 | 714 | All SZGR 2.0 genes in this pathway |
| LU EZH2 TARGETS DN | 414 | 237 | All SZGR 2.0 genes in this pathway |
| KOINUMA TARGETS OF SMAD2 OR SMAD3 | 824 | 528 | All SZGR 2.0 genes in this pathway |
| HOLLEMAN PREDNISOLONE RESISTANCE B ALL UP | 22 | 16 | All SZGR 2.0 genes in this pathway |
| HOLLEMAN PREDNISOLONE RESISTANCE ALL UP | 19 | 15 | All SZGR 2.0 genes in this pathway |