Gene Page:SLC9B2

Summary?
GeneID 133308
Symbol SLC9B2
Synonyms NHA2|NHE10|NHEDC2
Description solute carrier family 9 member B2
Reference MIM:611789|HGNC:HGNC:25143|Ensembl:ENSG00000164038|HPRD:14051|Vega:OTTHUMG00000131125
Gene type protein-coding
Map location 4q24
Pascal p-value 6.86E-5

Gene in Data Sources
Gene set name Method of gene set Description Info
CV:PGCnp Genome-wide Association Study GWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP ID Chromosome Position eGene Gene Entrez ID pvalue qvalue TSS distance eQTL type
rs17131472 chr1 91962966 NHEDC2 133308 0.02 trans
rs6739534 chr2 51702264 NHEDC2 133308 0.12 trans
rs17821815 chr2 119018522 NHEDC2 133308 0.09 trans
rs2922180 chr3 125280472 NHEDC2 133308 3.159E-5 trans
rs2971271 chr3 125450402 NHEDC2 133308 0.02 trans
rs2976809 chr3 125451738 NHEDC2 133308 4.751E-5 trans
rs16849258 chr3 165317775 NHEDC2 133308 0.15 trans
rs3106445 chr3 165326464 NHEDC2 133308 0.06 trans
rs1199915 0 NHEDC2 133308 0.14 trans
rs520325 chr3 165361016 NHEDC2 133308 0.03 trans
rs10050805 chr5 30805352 NHEDC2 133308 0.01 trans
rs16896071 chr5 66267342 NHEDC2 133308 0.03 trans
rs17056435 chr5 158453782 NHEDC2 133308 0.11 trans
rs6455226 chr6 67930295 NHEDC2 133308 0.01 trans
rs10273901 chr7 131828566 NHEDC2 133308 0.14 trans
rs714131 chr8 17992832 NHEDC2 133308 0.12 trans
rs2739726 chr8 17998576 NHEDC2 133308 0.07 trans
rs2305164 chr12 365649 NHEDC2 133308 0.2 trans
rs10879027 chr12 70237156 NHEDC2 133308 0.01 trans
rs9529974 chr13 72821935 NHEDC2 133308 0.13 trans
rs17073665 chr13 81541961 NHEDC2 133308 0.06 trans
rs17244419 chr14 97171074 NHEDC2 133308 0.04 trans
rs16976022 chr15 55454260 NHEDC2 133308 0.07 trans
rs16976029 chr15 55455268 NHEDC2 133308 0.05 trans
rs16976036 chr15 55456921 NHEDC2 133308 0.16 trans
rs8034402 chr15 55480932 NHEDC2 133308 0.19 trans
rs13380712 chr16 25601181 NHEDC2 133308 0 trans
rs17841422 chr17 20969134 NHEDC2 133308 0.01 trans
rs11873703 chr18 61448702 NHEDC2 133308 0.01 trans
rs6095741 chr20 48666589 NHEDC2 133308 3.524E-4 trans
rs5991662 chrX 43335796 NHEDC2 133308 0.02 trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
死神:胎儿(13 - 26所示postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway name Pathway size # SZGR 2.0 genes in pathway Info
LINDGREN BLADDER CANCER WITH LOH IN CHR9Q 116 71 All SZGR 2.0 genes in this pathway
LIANG HEMATOPOIESIS STEM CELL NUMBER SMALL VS HUGE DN 33 22 All SZGR 2.0 genes in this pathway
IVANOVA HEMATOPOIESIS STEM CELL LONG TERM 302 191 All SZGR 2.0 genes in this pathway
MOLENAAR TARGETS OF CCND1 AND CDK4 UP 67 48 All SZGR 2.0 genes in this pathway
WONG ADULT TISSUE STEM MODULE 721 492 All SZGR 2.0 genes in this pathway
MIKKELSEN ES ICP WITH H3K4ME3 718 401 All SZGR 2.0 genes in this pathway