Gene Page:CTNNB1
Summary?
GeneID | 1499年 |
Symbol | CTNNB1 |
同义词 | CTNNB|MRD19|armadillo |
描述 | catenin beta 1 |
参考 | MIM:116806|HGNC:HGNC:2514|Ensembl:ENSG00000168036|HPRD:00286|Vega:Otthumg00000131393 |
Gene type | 蛋白质编码 |
Map location | 3p21 |
Pascal p-value | 0.636 |
胎儿β | -0.341 |
DMG | 1(# studies) |
主持人 | 梭子基底神经节 |
Support | INTRACELLULAR SIGNAL TRANSDUCTION G2Cdb.humanNRC G2Cdb.humanPSD G2Cdb.humanPSP COMPOSITESET Darnell FMRP targets Potential synaptic genes |
Gene in Data Sources
Gene set name | Method of gene set | 描述 | 信息 |
---|---|---|---|
CV:PGCnp | Genome-wide Association Study | GWAS | |
DMG:Jaffe_2016 | 全基因组DNA甲基化分析 | This dataset includes 2,104 probes/CpGs associated with SZ patients (n=108) compared to 136 controls at Bonferroni-adjusted P < 0.05. | 1 |
PMID:cooccur | 高通量文献搜索 | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
文学 | 高通量文献搜索 | 与精神分裂症关键词共同存在:精神分裂症,精神分裂症,精神分裂症,精神分裂症 | 点击显示详细信息 |
Network | Shortest path distance of core genes in the Human protein-protein interaction network | Contribution to shortest path in PPI network: 1.9379 |
Section I. Genetics and epigenetics annotation
Differentially methylated gene
Probe | Chromosome | Position | Nearest gene | p(dis) | Beta (dis) | fdr(dis) | 学习 |
---|---|---|---|---|---|---|---|
cg04180460 | 3 | 41240962 | CTNNB1 | 4.47E-10 | -0.013 | 8.02E-7 | DMG:Jaffe_2016 |
eQTL annotation
SNP ID | Chromosome | Position | 主持人 | Gene Entrez ID | pvalue | QVALUE | TSS距离 | eQTL type |
---|---|---|---|---|---|---|---|---|
RS55840513 | 3 | 41239045 | CTNNB1 | ENSG00000168036.12 | 6.36481E-6 | 0.05 | 2717 | gtex_brain_putamen_basal |
rs13075993 | 3 | 41260017 | CTNNB1 | ENSG00000168036.12 | 6.68607E-6 | 0.05 | 23689 | gtex_brain_putamen_basal |
RS3774369 | 3 | 41267525 | CTNNB1 | ENSG00000168036.12 | 6.73806E-6 | 0.05 | 31197 | gtex_brain_putamen_basal |
rs11564454 | 3 | 41274477 | CTNNB1 | ENSG00000168036.12 | 6.64323E-6 | 0.05 | 38149 | gtex_brain_putamen_basal |
rs3774371 | 3 | 41276166 | CTNNB1 | ENSG00000168036.12 | 6.67766E-6 | 0.05 | 39838 | gtex_brain_putamen_basal |
rs11564465 | 3 | 41277040 | CTNNB1 | ENSG00000168036.12 | 6.67766E-6 | 0.05 | 40712 | gtex_brain_putamen_basal |
rs150512515 | 3 | 41281409 | CTNNB1 | ENSG00000168036.12 | 6.67626E-6 | 0.05 | 45081 | gtex_brain_putamen_basal |
RS11129895 | 3 | 41283382 | CTNNB1 | ENSG00000168036.12 | 6.68625E-6 | 0.05 | 47054 | gtex_brain_putamen_basal |
第二节。转录组注释
一般基因表达(GTEX)
![Not available](http://www.tjghsg.com/bioinfo/SZGR/GeneImg/CTNNB1_DE_GTEx.png)
Gene expression during devlopment (BrainCloud)
脚注:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
脚注:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
第三节。基因本体论注释
Molecular function | 去学期 | 证据 | 神经关键字 | PubMed ID |
---|---|---|---|---|
GO:0004871 | signal transducer activity | NAS | 10192393 | |
GO:0003713 | 转录共激活因子活性 | NAS | 15572661 | |
GO:0005198 | structural molecule activity | IEA | - | |
GO:0008022 | protein C-terminus binding | IPI | 10773885 | |
GO:0050681 | 雄激素受体结合 | NAS | 15572661 | |
Biological process | 去学期 | 证据 | 神经关键字 | PubMed ID |
GO:0001837 | epithelial to mesenchymal transition | TAS | 14679171 | |
GO:0007155 | 细胞粘附 | IEA | - | |
GO:0006350 | transcription | IEA | - | |
GO:0030521 | androgen receptor signaling pathway | NAS | 15572661 | |
GO:0045893 | positive regulation of transcription, DNA-dependent | NAS | 15572661 | |
GO:0060070 | Wnt receptor signaling pathway through beta-catenin | 我知道了 | 9601641 | |
细胞分量 | 去学期 | 证据 | 神经关键字 | PubMed ID |
去:0005829 | cytosol | EXP | 11955436|12000790|12820959 |15327769|16753179 |
|
GO:0005856 | 细胞骨架 | TAS | 7806582 | |
GO:0005634 | 核 | TAS | 9065401 | |
去:0005737 | 细胞质 | IEA | - | |
GO:0005886 | plasma membrane | TAS | 10837025 | |
GO:0016328 | lateral plasma membrane | IDA | 12072559 | |
GO:0030877 | β-catenin破坏复合物 | IDA | 9601641|16188939 |
Section IV. Protein-protein interaction annotation
Interactors | Aliases B | Official full name B | 实验 | 资源 | PubMed ID |
---|---|---|---|---|---|
ACP1 | haap |MGC111030 |MGC3499 | acid phosphatase 1, soluble | - | HPRD,BioGRID | 12438242 |
AJAP1 | Mot8 |RP3-426F10.1 |Shrew-1 |Shrew1 | adherens junctions associated protein 1 | - | HPRD,BioGRID | 14595118 |
APC | BTPS2 | DP2 | DP2.5 | DP3 | GS | 腺瘤息肉大肠杆菌 | APC interacts with Beta-catenin. | BIND | 15525529 |
APC | BTPS2 | DP2 | DP2.5 | DP3 | GS | 腺瘤息肉大肠杆菌 | - | HPRD | 12000790 |
APC | BTPS2 | DP2 | DP2.5 | DP3 | GS | 腺瘤息肉大肠杆菌 | β-catenin与APC相互作用。这种相互作用是建立在人β-catenin和小鼠APC之间的相互作用上的建模的。 | BIND | 15294866 |
APC | BTPS2 | DP2 | DP2.5 | DP3 | GS | 腺瘤息肉大肠杆菌 | 亲和力捕获 - 韦斯特恩 共晶结构 Far Western 重构的复合物 |
Biogrid | 8259519|9286858 |11251183|11533658 |11707392|11712088 |11972058|12628243 |
APC2 | APCL | 腺瘤性息肉病2 | - | HPRD,BioGRID | 9823329|10021369 |
ar | AIS | DHTR | HUMARA | KD | NR3C4 | SBMA | SMAX1 | TFM | androgen receptor | - | HPRD,BioGRID | 11916967 |
arHGEF4 | ASEF | ASEF1 | GEF4 | STM6 | Rho guanine nucleotide exchange factor (GEF) 4 | - | HPRD | 10947987 |
axin1 | AXIN | MGC52315 | 轴1 | 亲和力捕获 - 韦斯特恩 重构的复合物 Two-hybrid |
Biogrid | 9734785|12805222 |
axin1 | AXIN | MGC52315 | 轴1 | - | HPRD | 12000790 |
axin2 | AXIL | DKFZp781B0869 | MGC10366 | MGC126582 | 轴2 | - | HPRD,BioGRID | 10966653 |
axin2 | AXIL | DKFZp781B0869 | MGC10366 | MGC126582 | 轴2 | beta-catenin interacts with the Axin2 promoter. | BIND | 15304487 |
BCL3 | bcl4 |D19S37 | B-cell CLL/lymphoma 3 | CTNNB1 (beta-catenin) interacts with BCL3. | BIND | 15829968 |
BCL9 | LGS | MGC131591 | B-cell CLL/lymphoma 9 | Beta-catenin interacts with LGS1. | BIND | 15294866 |
BOC | - | BOC同源物(鼠标) | - | HPRD,BioGRID | 12634428 |
BTRC | beta-trcp |fbw1a |fbxw1 |fbxw1a |FWD1 |MGC4643 |BTRCP |BTRCP1 |betatrcp | beta-transducin repeat containing | - | HPRD | 11818547|12114015 |
BTRC | beta-trcp |fbw1a |fbxw1 |fbxw1a |FWD1 |MGC4643 |BTRCP |BTRCP1 |betatrcp | beta-transducin repeat containing | BTRC(beta-trcp1)与CTNNB1(β-catenin)相互作用。 | BIND | 15735746 |
CA9 | CAIX | MN | carbonic anhydrase IX | - | HPRD,BioGRID | 14567991 |
CACYBP | GIG5 | MGC87971 | PNAS-107 | RP1-102G20.6 | S100A6BP | SIP | calcyclin binding protein | 亲和力捕获 - 韦斯特恩 | Biogrid | 11389839 |
casp3 | CPP32 | CPP32B | SCA-1 | caspase 3, apoptosis-related cysteine peptidase | - | HPRD | 9348292 |
CASP8 | ALPS2B |cap4 |弗里斯|FLJ17672 |马赫|MCH5 |MGC78473 | caspase 8, apoptosis-related cysteine peptidase | - | HPRD | 12189238 |
CBY1 | C22orf2 | CBY | HS508I15A | PGEA1 | PIGEA-14 | PIGEA14 | arb1 | chibby homolog 1 (Drosophila) | - | HPRD,BioGRID | 12712206 |
CCND1 | BCL1 | D11S287E | PRAD1 | U21B31 | cyclin D1 | CTNNB1(β-catenin)与CCND1启动子相互作用。 | BIND | 15592430 |
CCND1 | BCL1 | D11S287E | PRAD1 | U21B31 | cyclin D1 | - | HPRD | 11836555 |
CD82 | 4F9 | C33 | GR15 | IA4 | KAI1 | R2 | SAR2 | ST6 | TSPAN27 | CD82 molecule | CTNNB1(β-catenin)与CD82(KAI1)启动子相互作用。 | BIND | 15829968 |
CDH1 | Arc-1 | CD324 | CDHE | ECAD | LCAM | UVO | cadherin 1, type 1, E-cadherin (epithelial) | 亲和力捕获 - 韦斯特恩 共晶结构 |
Biogrid | 7542250|7876318 |7954478|8227214 |9233779|9405455 |9535896|9819408 |10381631|10772923 |11113628|11245482 |11254878|11348595 |11712088|11960376 |12061792|12169098 |12634428|12640114 |12830000|15023525 |
CDH1 | Arc-1 | CD324 | CDHE | ECAD | LCAM | UVO | cadherin 1, type 1, E-cadherin (epithelial) | - | HPRD | 9512503 |
CDH1 | Arc-1 | CD324 | CDHE | ECAD | LCAM | UVO | cadherin 1, type 1, E-cadherin (epithelial) | β-catenin与E-钙粘着蛋白相互作用。This interaction was modelled on a demonstrated interaction between human beta-catenin and mouse E-cadherin. | BIND | 15294866 |
CDH1 | Arc-1 | CD324 | CDHE | ECAD | LCAM | UVO | cadherin 1, type 1, E-cadherin (epithelial) | E-cadherin interacts with beta-catenin. | BIND | 14706341 |
CDH1 | Arc-1 | CD324 | CDHE | ECAD | LCAM | UVO | cadherin 1, type 1, E-cadherin (epithelial) | β-catenin与E-钙粘着蛋白相互作用。这种相互作用是基于未指定物种与人E-钙粘着蛋白的β-catenin之间的相互作用进行建模的。 | BIND | 15542433 |
CDH10 | - | cadherin 10, type 2 (T2-cadherin) | 亲和力捕获 - 韦斯特恩 | Biogrid | 10861224 |
CDH11 | CAD11 | CDHOB | OB | OSF-4 | cadherin 11, type 2, OB-cadherin (osteoblast) | - | HPRD,BioGRID | 10029089 |
CDH15 | CDH14 |CDH3 |CDHM |MCAD | 钙粘蛋白15,1型,M-辅助蛋白(肌管) | - | HPRD | 9545347 |
CDH16 | - | 钙粘蛋白16,ksp-钙黏着蛋白 | - | HPRD | 15023525 |
CDH17 | CDH16 |FLJ26931 |HPT-1 |HPT1 |MGC138218 |MGC142024 | cadherin 17, LI cadherin (liver-intestine) | 亲和力捕获 - 韦斯特恩 | Biogrid | 15023525 |
CDH18 | CDH14 |CDH14L | CDH24 | EY-CADHERIN | 钙粘蛋白18,类型2 | 亲和力捕获 - 韦斯特恩 | Biogrid | 10207020 |
CDH2 | CD325 | CDHN | CDw325 | NCAD | cadherin 2, type 1, N-cadherin (neuronal) | Affinity Capture-MS 亲和力捕获 - 韦斯特恩 |
Biogrid | 12604612|14625392 |
CDH2 | CD325 | CDHN | CDw325 | NCAD | cadherin 2, type 1, N-cadherin (neuronal) | - | HPRD | 12151522 |
CDH24 | CDH11L | FLJ25193 | MGC131880 | 钙粘蛋白样24 | - | HPRD | 12734196 |
CDH3 | CDHP |HJMD |PCAD | cadherin 3, type 1, P-cadherin (placental) | - | HPRD | 8227214|10381631 |11889072|12800191 |
CDH3 | CDHP |HJMD |PCAD | cadherin 3, type 1, P-cadherin (placental) | 亲和力捕获 - 韦斯特恩 Co-purification |
Biogrid | 10381631|10910767 |
CDH5 | 7B4 | CD144 | FLJ17376 | cadherin 5, type 2 (vascular endothelium) | - | HPRD | 12413882 |
CDH5 | 7B4 | CD144 | FLJ17376 | cadherin 5, type 2 (vascular endothelium) | 亲和力捕获 - 韦斯特恩 | Biogrid | 9434630|12003790 |
CDH6 | KCAD | cadherin 6, type 2, K-cadherin (fetal kidney) | 亲和力捕获 - 韦斯特恩 | Biogrid | 10207020 |
CDH7 | CDH7L1 | cadherin 7, type 2 | - | HPRD,BioGRID | 10861224 |
CDH8 | Nbla04261 | cadherin 8, type 2 | - | HPRD,BioGRID | 9521872 |
CDH9 | MGC125386 | cadherin 9, type 2 (T1-cadherin) | - | HPRD,BioGRID | 10861224 |
CDK5 | PSSALRE | cyclin-dependent kinase 5 | - | HPRD | 11168528 |
CDK5R1 | CDK5P35 | CDK5R | MGC33831 | NCK5A | p23 | p25 | p35 | p35nck5a | cyclin-dependent kinase 5, regulatory subunit 1 (p35) | 亲和力捕获 - 韦斯特恩 重构的复合物 |
Biogrid | 11168528 |
CDON | CDO | MGC111524 | ORCAM | Cdon homolog (mouse) | - | HPRD,BioGRID | 12634428 |
CEBPA | C/EBP-Alpha |CEBP | CCAAT/enhancer binding protein (C/EBP), alpha | - | HPRD,BioGRID | 12861022 |
CHUK | IKBKA | IKK-alpha | IKK1 | IKKA | NFKBIKA | TCF16 | conserved helix-loop-helix ubiquitous kinase | - | HPRD,BioGRID | 11527961 |
克雷布 | CBP | KAT3A | RSTS | CREB binding protein | Phenotypic Enhancement | Biogrid | 15782138 |
CSNK2A1 | CK2A1 | CKII | 酪蛋白激酶2,α1多肽 | - | HPRD | 12432063 |
CTNNA1 | CAP102 |FLJ36832 | catenin (cadherin-associated protein), alpha 1, 102kDa | - | HPRD,BioGRID | 7706414 |
CTNNA1 | CAP102 |FLJ36832 | catenin (cadherin-associated protein), alpha 1, 102kDa | Beta-catenin interacts with alpha-catenin. This interaction was modelled on a demonstrated interaction between human beta-catenin and mouse alpha-catenin. | BIND | 15294866 |
CTNNA3 | MGC26194 |MGC75041 |VR22 | catenin (cadherin-associated protein), alpha 3 | - | HPRD,BioGRID | 11590244 |
ctnnbip1 | 我知道了AT | MGC15093 | catenin, beta interacting protein 1 | - | HPRD,BioGRID | 10898789 |
CTNND1 | CAS | CTNND | KIAA0384 | P120CAS | P120CTN | p120 | catenin (cadherin-associated protein), delta 1 | 亲和力捕获 - 韦斯特恩 | Biogrid | 9535896|11712088 |
DKK1 | DKK-1 | SK | dickkopf homolog 1 (Xenopus laevis) | CTNNB1(β-连环蛋白)与DKK1舞会oter. | BIND | 15592430 |
DLG1 | DKFZP761P0818 |DKFZP781B0426 |dlgh1 |SAP97 |DJ1061C18.1.1 |HDLG | 圆盘,大型同源物1(果蝇) | - | HPRD | 9512503 |
DLG5 | KIAA0583 |LP-DLG |p-dlg5 |PDLG | discs, large homolog 5 (Drosophila) | - | HPRD,BioGRID | 12657639 |
DLGAP1 | DAP-1 | DAP-1-ALPHA | DAP-1-BETA | GKAP | MGC88156 | SAPAP1 | hGKAP | 圆盘,大(果蝇)同源物相关蛋白1 | 亲和力捕获 - 韦斯特恩 | Biogrid | 9286858 |
DSC3 | CDHF3 | DSC | DSC1 | DSC2 | DSC4 | HT-CP | Desmocollin 3 | - | HPRD,BioGRID | 10769211 |
DVL1 | DVL | MGC54245 | dishevelled, dsh homolog 1 (Drosophila) | - | HPRD,BioGRID | 10806215 |
DVL2 | - | Dish,DSH同源2(果蝇) | 亲和力捕获 - 韦斯特恩 | Biogrid | 10806215 |
DVL3 | KIAA0208 | Dish,DSH同源3(果蝇) | - | HPRD,BioGRID | 10806215 |
egfr | ERBB | ERBB1 | HER1 | PIG61 | mENA | 表皮生长因子受体(红细胞性白血病病毒(V-ERB-B)癌基因同源物,鸟类) | - | HPRD,BioGRID | 9233779 |
ERBB2 | CD340 | HER-2 | HER-2/neu | HER2 | NEU | NGL | TKR1 | V-ERB-B2红细胞白血病病毒性癌基因同源2,神经/胶质母细胞瘤衍生的癌基因同源物(Avian) | - | HPRD,BioGRID | 7702605 |
ESR1 | DKFZP686N23123 |er |ESR |Esra |时代|NR3A1 | 雌激素受体1 | 亲和力捕获 - 韦斯特恩 | Biogrid | 15304487 |
ESR1 | DKFZP686N23123 |er |ESR |Esra |时代|NR3A1 | 雌激素受体1 | beta-catenin interacts with ER-alpha. | BIND | 15304487 |
EZR | CVIL | CVL | DKFZp762H157 | FLJ26216 | MGC1584 | VIL2 | ezrin | - | HPRD,BioGRID | 10462524 |
FAS | ALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6 | Fas (TNF receptor superfamily, member 6) | CTNNB1 (beta-catenin) interacts with the FAS promoter. | BIND | 15829968 |
fer | TYK3 | fer (fps/fes related) tyrosine kinase | 生化活动 | Biogrid | 12640114 |
FGF20 | - | fibroblast growth factor 20 | CTNNB1(β-catenin)与FGF20启动子相互作用。 | BIND | 15592430 |
FHL2 | AAG11 |Dral |Slim3 | four and a half LIM domains 2 | - | HPRD,BioGRID | 12466281 |
FOXO1 | FKH1 | FKHR | FOXO1A | forkhead box O1 | beta-catenin interacts with FOXO1. This interaction was modelled on a demonstrated interaction between beta-catenin from an unspecified species and human FOXO1. | BIND | 15905404 |
FOXO3 | AF6q21 | DKFZp781A0677 | FKHRL1 | FKHRL1P2 | FOXO2 | FOXO3A | MGC12739 | MGC31925 | forkhead box O3 | β-catenin与FOXO3A相互作用。 | BIND | 15905404 |
FOXO4 | AFX | AFX1 | MGC120490 | MLLT7 | forkhead box O4 | β-catenin与FOXO4相互作用。这种相互作用是基于未指定物种的人类FoxO4和β-catenin之间的相互作用进行建模的。 | BIND | 15905404 |
FSCN2 | RFSN |RP30 | FASTIN同源物2,肌动蛋白捆绑蛋白,视网膜(purvuratus strongylocentrotus) | - | HPRD | 11795941 |
FYN | MGC45350 |SLK |syn | FYN oncogene related to SRC, FGR, YES | 生化活动 | Biogrid | 12640114 |
GNA13 | G13 | MGC46138 | guanine nucleotide binding protein (G protein), alpha 13 | - | HPRD | 11136230 |
GRIK2 | EAA4 |Glr6 |Gluk6 |glur6 |MGC74427 |MRT6 | glutamate receptor, ionotropic, kainate 2 | - | HPRD | 12151522 |
GRIN1 | NMDA1 | NMDAR1 | NR1 | 谷氨酸受体,离子型,N-甲基D-天冬氨酸1 | - | HPRD | 10862698 |
GSK3B | - | 糖原合酶激酶3β | GSK3B (GSK3-Beta) interacts with and phosphorylates CTNNB1 (Beta-catenin). | BIND | 15829978 |
GSK3B | - | 糖原合酶激酶3β | 亲和力捕获 - 韦斯特恩 生化活动 |
Biogrid | 10330181|11251183 |
HNF1A | HNF1 | LFB1 | MODY3 | TCF1 | HNF1 homeobox A | - | HPRD | 11266540|12107263 |
HNF4A | FLJ39654 | HNF4 | HNF4a7 | HNF4a8 | HNF4a9 | MODY | MODY1 | NR2A1 | NR2A21 | TCF | TCF14 | 肝细胞核因子4,α | 亲和力捕获 - 韦斯特恩 重构的复合物 |
Biogrid | 12944908 |
IGFBP2 | IBP2 |IGF-BP53 | insulin-like growth factor binding protein 2, 36kDa | CTNNB1(β-catenin)与IGFBP2启动子相互作用。 | BIND | 15735679 |
ikbkb | FLJ40509 |ikk-beta |ikk2 |ikkb |MGC131801 |nfkbikb | inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta | - | HPRD,BioGRID | 11527961 |
IQGAP1 | HUMORFA01 | KIAA0051 | SAR1 | p195 | 含有GTPase激活蛋白1的智商基序1 | - | HPRD,BioGRID | 11734550 | 12446675 |
JUP | arVD12 | CTNNG | DP3 | DPIII | PDGB | PKGB | junction plakoglobin | 亲和力捕获 - 韦斯特恩 | Biogrid | 9535896|11712088 |
KLK3 | APS |KLK2A1 |PSA |HK3 | kallikrein-related peptidase 3 | CTNNB1(β-catenin)与KLK3(PSA)启动子相互作用。 | BIND | 15829968 |
lef1 | DKFZp586H0919 | TCF1ALPHA | lymphoid enhancer-binding factor 1 | - | HPRD | 8757136|12556497 |
lef1 | DKFZp586H0919 | TCF1ALPHA | lymphoid enhancer-binding factor 1 | 亲和力捕获 - 韦斯特恩 Two-hybrid |
Biogrid | 8757136|12748295 |15684397 |
lef1 | DKFZp586H0919 | TCF1ALPHA | lymphoid enhancer-binding factor 1 | LEF-1 interacts with Beta-catenin. This interaction was modeled on a demonstrated interaction between human LEF-1 and mouse Beta-catenin. | BIND | 15525529 |
LGALS9 | HUAT | LGALS9A | MGC117375 | MGC125973 | MGC125974 | lectin, galactoside-binding, soluble, 9 | Affinity Capture-MS | Biogrid | 17353931 |
MAGI1 | AIP3 | BAIAP1 | BAP1 | MAGI-1 | TNRC19 | WWP3 | 膜相关的鸟苷酸激酶,WW和PDZ结构域,含有1个 | 亲和力捕获 - 韦斯特恩 重构的复合物 Two-hybrid |
Biogrid | 10772923 |
MAGI2 | acvrip1 |AIP1 |arip1 |magi-2 |SSCAM | 膜相关的鸟苷酸激酶,WW和PDZ结构域,含有2个 | - | HPRD | 11826105 |
MET | auts9 |HGFR |RCCP2 |C-MET | met proto-oncogene (hepatocyte growth factor receptor) | 亲和力捕获 - 韦斯特恩 | Biogrid | 11254878 |
MUC1 | CD227 |EMA |H23AG |mam6 |Pem |Pemt |棕榈 | mucin 1, cell surface associated | 亲和力捕获 - 韦斯特恩 重构的复合物 |
Biogrid | 9139698|9819408 |11152665|11483589 |11877440|12618757 |12750561 |
MUC1 | CD227 |EMA |H23AG |mam6 |Pem |Pemt |棕榈 | mucin 1, cell surface associated | MUC1interacts with beta-catenin. | BIND | 11483589 |
MUC1 | CD227 |EMA |H23AG |mam6 |Pem |Pemt |棕榈 | mucin 1, cell surface associated | - | HPRD | 9139698|11152665 |11483589|11877440 |
MYO7A | DFNA11 | DFNB2 | MYOVIIA | MYU7A | NSRD2 | USH1B | myosin VIIA | 亲和力捕获 - 韦斯特恩 | Biogrid | 11080149 |
Neurl2 | C20orf163 | MGC125934 | MGC125935 | OZZ | Ozz-E3 | 神经同源2(果蝇) | - | HPRD | 14960280 |
NFKB1 | DKFZP686C01211 |EBP-1 |kbf1 |MGC54151 |nf-kappa-b |NFKB-P105 |NFKB-P50 |P105 | B细胞中Kappa光多肽基因增强子的核因子1 | NFKB1 (p50) interacts with CTNNB1 (beta-catenin). | BIND | 15829968 |
NLK | DKFZP761G1211 |FLJ21033 | 线性激酶 | 亲和力捕获 - 韦斯特恩 | Biogrid | 12556497 |
NR5A1 | AD4BP |ELP |ftz1 |ftzf1 |SF-1 |SF1 | nuclear receptor subfamily 5, group A, member 1 | - | HPRD,BioGRID | 12554773 |
NR5A2 | B1F | B1F2 | CPF | FTF | FTZ-F1 | FTZ-F1beta | LRH-1 | hB1F | hB1F-2 | nuclear receptor subfamily 5, group A, member 2 | β-catenin与LRH-1相互作用。 | BIND | 15327767 |
PCSK1 | BMIQ12 |Nec1 |PC1 |PC3 |SPC3 | 普罗蛋白转化酶枯草蛋白/KEXIN类型1 | 亲和力捕获 - 韦斯特恩 | Biogrid | 11113628 |
PECAM1 | CD31 | PECAM-1 | platelet/endothelial cell adhesion molecule | - | HPRD,BioGRID | 10801826 |
PHB2 | BAP | BCAP37 | Bap37 | MGC117268 | PNAS-141 | REA | p22 | prohibitin 2 | Affinity Capture-MS | Biogrid | 17353931 |
PIK3R1 | grb1 |P85 |p85-alpha | 磷酸肌醇3-激酶,调节亚基1(alpha) | 重构的复合物 | Biogrid | 10477752 |
PIK3R1 | grb1 |P85 |p85-alpha | 磷酸肌醇3-激酶,调节亚基1(alpha) | - | HPRD | 11716761 |
PIN1 | DOD | UBL5 | peptidylprolyl cis/trans isomerase, NIMA-interacting 1 | - | HPRD,BioGRID | 11533658 |
PKD1 | PBP | polycystic kidney disease 1 (autosomal dominant) | Polycystin-1与β-catenin相互作用。 | BIND | 11113628 |
PKD1 | PBP | polycystic kidney disease 1 (autosomal dominant) | - | HPRD | 11274246 |
PKP2 | arVD9 | plakophilin 2 | - | HPRD | 11790773 |
PSEN1 | AD3 | FAD | PS1 | S182 | presenilin 1 | 亲和力捕获 - 韦斯特恩 | Biogrid | 9738936|9852041 |10341227 |
PSEN1 | AD3 | FAD | PS1 | S182 | presenilin 1 | PS1与β-catenin相互作用。 | BIND | 9632714 |
PTN | HARP | HBGF8 | HBNF | NEGF1 | pleiotrophin | 亲和力捕获 - 韦斯特恩 | Biogrid | 10706604 |
PTPN1 | PTP1B | protein tyrosine phosphatase, non-receptor type 1 | - | HPRD,BioGRID | 12377785 |
PTPN11 | BPTP3 | CFC | MGC14433 | NS1 | PTP-1D | PTP2C | SH-PTP2 | SH-PTP3 | SHP2 | protein tyrosine phosphatase, non-receptor type 11 | 亲和力捕获 - 韦斯特恩 | Biogrid | 10681592 |
PTPN13 | DKFZP686J1497 |FAP-1 |PNP1 |PTP-BAS |ptp-bl |ptp1e |ptpl1 |ptple | protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) | 重构的复合物 | Biogrid | 10951583 |
PTPN14 | MGC126803 | PEZ | PTP36 | protein tyrosine phosphatase, non-receptor type 14 | - | HPRD,BioGRID | 12808048 |
PTPRB | DKFZp686E2262 | DKFZp686H15164 | FLJ44133 | HPTP-BETA | HPTPB | MGC142023 | MGC59935 | PTPB | R-PTP-BETA | VEPTP | 蛋白酪氨酸磷酸酶,受体类型,B | - | HPRD | 10706604 |
PTPRF | FLJ43335 |FLJ45062 |FLJ45567 |拉尔 | 蛋白酪氨酸磷酸酶,受体类型,F | 亲和力捕获 - 韦斯特恩 重构的复合物 |
Biogrid | 9245795|11245482 |
PTPRF | FLJ43335 |FLJ45062 |FLJ45567 |拉尔 | 蛋白酪氨酸磷酸酶,受体类型,F | - | HPRD | 9245795|12095414 |
PTPRJ | CD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1 | 蛋白酪氨酸磷酸酶,受体类型,J | - | HPRD,BioGRID | 12370829 |
PTPRK | DKFZP686C2268 |DKFZP779N1045 |R-PTP-KAPPA | 蛋白酪氨酸磷酸酶,受体类型,K | - | HPRD,BioGRID | 8663237 |
PTPRU | FLJ37530 |FMI |glepp1 |PCP-2 |PTP |PTP-J |ptp-pi |ptppsi |PTPRO |PTPU2 | R-PTP-PSI | hPTP-J | 蛋白酪氨酸磷酸酶,受体类型,U | - | HPRD,BioGRID | 12501215 |
PTPRZ1 | hptpz |hptpzeta |PTP-Zeta |PTP18 |ptprz |ptpz |RPTPB |rptpbeta |磷酸 | 蛋白酪氨酸磷酸酶,受体类型,Z多肽1 | - | HPRD,BioGRID | 10706604 |
PYGO1 | DKFZp547G0910 | pygopus homolog 1 (Drosophila) | - | HPRD | 11955446 |
RAB8B | FLJ38125 | RAB8B, member RAS oncogene family | 亲和力捕获 - 韦斯特恩 | Biogrid | 12639940 |
RICS | GC-GAP | GRIT | KIAA0712 | MGC1892 | p200RhoGAP | p250GAP | Rho GTPase-activating protein | - | HPRD | 12531901 |
ruvbl1 | ECP54 |ino80h |NMP238 |Pontin |Pontin52 |RVB1 |tih1 |TIP49 |TIP49A | RuvB-like 1 (E. coli) | 亲和力捕获 - 韦斯特恩 重构的复合物 |
Biogrid | 9843967 |
ruvbl2 | CGI-46 | ECP51 | INO80J | REPTIN | RVB2 | TIH2 | TIP48 | TIP49B | RuvB-like 2 (E. coli) | CTNNB1 (beta-catenin) interacts with RUVBL2 (reptin). | BIND | 15829968 |
RXRA | FLJ00280 |FLJ00318 |FLJ16020 |FLJ16733 |MGC102720 |NR2B1 | retinoid X receptor, alpha | 亲和力捕获 - 韦斯特恩 | Biogrid | 12771132 |
SGK1 | SGK | serum/glucocorticoid regulated kinase 1 | CTNNB1 (beta-catenin) interacts with the SGK promoter. | BIND | 15735679 |
SKP1 | EMC19 |MGC34403 |OCP-II |OCP2 |Skp1a |TCEB1L |P19A | S-phase kinase-associated protein 1 | 亲和力捕获 - 韦斯特恩 | Biogrid | 11389839 |
SLC9A3R1 | EBP50 |nherf |nherf1 |nphlop2 | 溶质载体家族9(钠/氢交换器),成员3调节器1 | - | HPRD,BioGRID | 12830000 |
Smad2 | JV18 | JV18-1 | MADH2 | MADR2 | MGC22139 | MGC34440 | hMAD-2 | hSMAD2 | SMAD family member 2 | - | HPRD,BioGRID | 12000714 |
Smad3 | DKFZp586N0721 | DKFZp686J10186 | HSPC193 | HsT17436 | JV15-2 | MADH3 | MGC60396 | SMAD family member 3 | - | HPRD,BioGRID | 12000714 |
Smad4 | DPC4 | JIP | MADH4 | SMAD family member 4 | - | HPRD,BioGRID | 12000714 |
Smad7 | CRCS3 | FLJ16482 | MADH7 | MADH8 | SMAD family member 7 | 亲和力捕获 - 韦斯特恩 Co-localization |
Biogrid | 15684397 |
SMARCA4 | BAF190 | BRG1 | FLJ39786 | SNF2 | SNF2-BETA | SNF2L4 | SNF2LB | SWI2 | hSNF2b | SWI/SNF相关,矩阵相关,染色质的肌动蛋白依赖性调节剂,亚家族A,成员4 | - | HPRD,BioGRID | 11532957 |
TAX1BP3 | TIP-1 | Tax1 (human T-cell leukemia virus type I) binding protein 3 | - | HPRD | 12874278 |
TBL1X | EBI | SMAP55 | TBL1 | 跨多霉素(β)类似1倍连接 | - | HPRD,BioGRID | 11389839 |
TCF3 | e2a |itf1 |MGC129647 |MGC129648 |BHLHB21 | 转录因子3(E2A免疫球蛋白增强子结合因子E12/E47) | - | HPRD | 12107263 |
TCF4 | E2-2 | ITF2 | MGC149723 | MGC149724 | PTHS | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | bHLHb19 | transcription factor 4 | - | HPRD | 11713476|12861022 |
TCF4 | E2-2 | ITF2 | MGC149723 | MGC149724 | PTHS | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | bHLHb19 | transcription factor 4 | 亲和力捕获 - 韦斯特恩 共晶结构 重构的复合物 |
Biogrid | 11713475|11713476 |12657632|15331612 |
TCF7L1 | TCF-3 |TCF3 | 转录因子7样1(T特异性,HMG-box) | 共晶结构 | Biogrid | 11136974 |
TCF7L1 | TCF-3 |TCF3 | 转录因子7样1(T特异性,HMG-box) | - | HPRD | 11266540 |
TCF7L2 | TCF-4 | TCF4 | 转录因子7样2(T特异性,HMG-box) | 亲和力捕获 - 韦斯特恩 | Biogrid | 12861022 |
TCF7L2 | TCF-4 | TCF4 | 转录因子7样2(T特异性,HMG-box) | - | HPRD | 11713476 |
TCF7L2 | TCF-4 | TCF4 | 转录因子7样2(T特异性,HMG-box) | TCF-4 interacts with Beta-catenin. | BIND | 15525529 |
TCF7L2 | TCF-4 | TCF4 | 转录因子7样2(T特异性,HMG-box) | Beta-catenin interacts with TCF4. | BIND | 15294866 |
TFAP2A | AP-2 | AP-2alpha | AP2TF | BOFS | TFAP2 | transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) | 亲和力捕获 - 韦斯特恩 | Biogrid | 15331612 |
TFF1 | BCEI | D21S21 | HP1.A | HPS2 | pNR-2 | pS2 | trefoil factor 1 | β-catenin与PS2启动子相互作用。 | BIND | 15304487 |
TGFBR1 | AAT5 |ACVRLK4 |ALK-5 |Alk5 |LDS1A |LDS2A |SKR4 |TGFR-1 | 转化生长因子,β受体1 | - | HPRD | 12000714 |
TGFBR2 | AAT3 |FAA3 |LDS1B |LDS2B |MFS2 |riic |taad2 |TGFR-2 |TGFBETA-RII | transforming growth factor, beta receptor II (70/80kDa) | 亲和力捕获 - 韦斯特恩 | Biogrid | 12000714 |
USP9X | DFFRX | FAF | FAM | ubiquitin specific peptidase 9, X-linked | - | HPRD,BioGRID | 10620020 |
VCL | CMD1W |MVCL | vinculin | 亲和力捕获 - 韦斯特恩 | Biogrid | 9405455 |
VEZT | DKFZp761C241 | VEZATIN | Vezatin,粘附连接跨膜蛋白 | - | HPRD,BioGRID | 11080149 |
Section V. Pathway annotation
Section VI. microRNA annotation
miRNA family | Target position | mirna id | mirna seq | ||
---|---|---|---|---|---|
UTR开始 | UTR结束 | 匹配方法 | |||
miR-139 | 349 | 355 | 1A | HSA-MIR-139脑 | ucuacagugcacgugucu |
miR-141/200a | 697 | 703 | 1A | HSA-MIR-141 | UAACACUGUCUGGUAAAGAUGG |
hsa-miR-200a | UAACACUGUCUGGUAACGAUGU | ||||
miR-217 | 669 | 675 | 1A | hsa-miR-217 | UACUGCAUCAGGAACUGAUUGGAU |
mir-320 | 239 | 245 | m8 | HSA-MIR-320 | aaaagcugggugagaggggcgaa |
miR-381 | 829 | 835 | 1A | HSA-MIR-381 | UAUACAAGGGCAAGCUCUCUGU |