Summary?
GeneID 155368
Symbol WBSCR27
Synonyms -
Description Williams Beuren syndrome chromosome region 27
Reference MIM:612546|HGNC:HGNC:19068|Ensembl:ENSG00000165171|HPRD:15661|Vega:OTTHUMG00000130033
Gene type protein-coding
Map location 7q11.23
Pascal p-value 0.744
Fetal beta -0.51
DMG 1 (# studies)
eGene Anterior cingulate cortex BA24
Caudate basal ganglia
Cerebellar Hemisphere
Cerebellum
Cortex
Frontal Cortex BA9
Hippocampus
Hypothalamus
Nucleus accumbens basal ganglia
Putamen basal ganglia
Meta

Gene in Data Sources
Gene set name Method of gene set Description Info
CNV:YES Copy number variation studies Manual curation
CV:PGCnp Genome-wide Association Study GWAS
DMG:Jaffe_2016 Genome-wide DNA methylation analysis This dataset includes 2,104 probes/CpGs associated with SZ patients (n=108) compared to 136 controls at Bonferroni-adjusted P < 0.05. 1

Section I. Genetics and epigenetics annotation

@Differentially methylated gene

Probe Chromosome Position Nearest gene P (dis) Beta (dis) FDR (dis) Study
cg25783469 7 73256908 WBSCR27 1.77E-8 -0.009 6.39E-6 DMG:Jaffe_2016

@eQTL annotation

SNP ID Chromosome Position eGene Gene Entrez ID pvalue qvalue TSS distance eQTL type
rs12536654 7 73147068 WBSCR27 ENSG00000165171.6 1.742E-8 0 109797 gtex_brain_ba24
rs72466218 7 73149232 WBSCR27 ENSG00000165171.6 2.239E-10 0 107633 gtex_brain_ba24
rs13233747 7 73149302 WBSCR27 ENSG00000165171.6 5.093E-9 0 107563 gtex_brain_ba24
rs2293484 7 73151220 WBSCR27 ENSG00000165171.6 1.478E-9 0 105645 gtex_brain_ba24
rs7782126 7 73154074 WBSCR27 ENSG00000165171.6 1.776E-10 0 102791 gtex_brain_ba24
rs10232827 7 73155017 WBSCR27 ENSG00000165171.6 1.755E-10 0 101848 gtex_brain_ba24
rs7806956 7 73155477 WBSCR27 ENSG00000165171.6 3.083E-9 0 101388 gtex_brain_ba24
rs7807097 7 73155569 WBSCR27 ENSG00000165171.6 1.755E-10 0 101296 gtex_brain_ba24
rs1880953 7 73157882 WBSCR27 ENSG00000165171.6 1.118E-10 0 98983 gtex_brain_ba24
rs11981405 7 73162437 WBSCR27 ENSG00000165171.6 5.52E-11 0 94428 gtex_brain_ba24
rs12539962 7 73167259 WBSCR27 ENSG00000165171.6 3.549E-11 0 89606 gtex_brain_ba24
rs10949827 7 73172186 WBSCR27 ENSG00000165171.6 1.407E-11 0 84679 gtex_brain_ba24
rs201728988 7 73172291 WBSCR27 ENSG00000165171.6 2.739E-10 0 84574 gtex_brain_ba24
rs13237921 7 73178203 WBSCR27 ENSG00000165171.6 1.503E-6 0 78662 gtex_brain_ba24
rs67424347 7 73179190 WBSCR27 ENSG00000165171.6 2.798E-6 0 77675 gtex_brain_ba24
rs12536661 7 73182017 WBSCR27 ENSG00000165171.6 2.785E-6 0 74848 gtex_brain_ba24
rs10709722 7 73183271 WBSCR27 ENSG00000165171.6 5.427E-11 0 73594 gtex_brain_ba24
rs7798722 7 73185562 WBSCR27 ENSG00000165171.6 2.227E-6 0 71303 gtex_brain_ba24
rs6460055 7 73187517 WBSCR27 ENSG00000165171.6 4.889E-11 0 69348 gtex_brain_ba24
rs11979680 7 73188574 WBSCR27 ENSG00000165171.6 1.275E-11 0 68291 gtex_brain_ba24
rs10236342 7 73189279 WBSCR27 ENSG00000165171.6 4.881E-11 0 67586 gtex_brain_ba24
rs6958663 7 73189302 WBSCR27 ENSG00000165171.6 4.881E-11 0 67563 gtex_brain_ba24
rs188580753 7 73190651 WBSCR27 ENSG00000165171.6 2.423E-10 0 66214 gtex_brain_ba24
rs6965004 7 73190705 WBSCR27 ENSG00000165171.6 1.233E-11 0 66160 gtex_brain_ba24
rs6460056 7 73191226 WBSCR27 ENSG00000165171.6 4.869E-11 0 65639 gtex_brain_ba24
rs200173952 7 73193149 WBSCR27 ENSG00000165171.6 6.162E-12 0 63716 gtex_brain_ba24
rs71082262 7 73193150 WBSCR27 ENSG00000165171.6 1.022E-11 0 63715 gtex_brain_ba24
rs6947264 7 73193995 WBSCR27 ENSG00000165171.6 4.853E-11 0 62870 gtex_brain_ba24
rs4717815 7 73195661 WBSCR27 ENSG00000165171.6 1.277E-11 0 61204 gtex_brain_ba24
rs4507641 7 73196890 WBSCR27 ENSG00000165171.6 1.489E-10 0 59975 gtex_brain_ba24
rs3886187 7 73205363 WBSCR27 ENSG00000165171.6 1.542E-8 0 51502 gtex_brain_ba24
rs6952976 7 73209016 WBSCR27 ENSG00000165171.6 2.86E-11 0 47849 gtex_brain_ba24
rs7792129 7 73210413 WBSCR27 ENSG00000165171.6 4.218E-11 0 46452 gtex_brain_ba24
rs7777044 7 73210778 WBSCR27 ENSG00000165171.6 5.865E-11 0 46087 gtex_brain_ba24
rs7777704 7 73210977 WBSCR27 ENSG00000165171.6 4.289E-11 0 45888 gtex_brain_ba24
rs7778187 7 73211329 WBSCR27 ENSG00000165171.6 5.32E-7 0 45536 gtex_brain_ba24
rs28414777 7 73212647 WBSCR27 ENSG00000165171.6 4.098E-11 0 44218 gtex_brain_ba24
rs12537291 7 73212929 WBSCR27 ENSG00000165171.6 4.12E-11 0 43936 gtex_brain_ba24
rs4632942 7 73213712 WBSCR27 ENSG00000165171.6 4.159E-11 0 43153 gtex_brain_ba24
rs10223902 7 73214382 WBSCR27 ENSG00000165171.6 4.194E-11 0 42483 gtex_brain_ba24
rs12668451 7 73214999 WBSCR27 ENSG00000165171.6 3.043E-12 0 41866 gtex_brain_ba24
rs10949828 7 73216733 WBSCR27 ENSG00000165171.6 3.221E-12 0 40132 gtex_brain_ba24
rs13232536 7 73219508 WBSCR27 ENSG00000165171.6 3.834E-12 0 37357 gtex_brain_ba24
rs150887167 7 73220024 WBSCR27 ENSG00000165171.6 3.944E-12 0 36841 gtex_brain_ba24
rs7796554 7 73220040 WBSCR27 ENSG00000165171.6 8.912E-12 0 36825 gtex_brain_ba24
rs6460060 7 73221042 WBSCR27 ENSG00000165171.6 1.981E-12 0 35823 gtex_brain_ba24
rs140830236 7 73222775 WBSCR27 ENSG00000165171.6 4.002E-12 0 34090 gtex_brain_ba24
rs35558014 7 73223077 WBSCR27 ENSG00000165171.6 2.396E-12 0 33788 gtex_brain_ba24
rs367896180 7 73223371 WBSCR27 ENSG00000165171.6 4.223E-12 0 33494 gtex_brain_ba24
rs7812097 7 73223473 WBSCR27 ENSG00000165171.6 2.389E-12 0 33392 gtex_brain_ba24
rs4440516 7 73224041 WBSCR27 ENSG00000165171.6 3.448E-12 0 32824 gtex_brain_ba24
rs7781973 7 73224718 WBSCR27 ENSG00000165171.6 3.453E-12 0 32147 gtex_brain_ba24
rs4355658 7 73225692 WBSCR27 ENSG00000165171.6 2.116E-12 0 31173 gtex_brain_ba24
rs11762644 7 73230944 WBSCR27 ENSG00000165171.6 2.008E-12 0 25921 gtex_brain_ba24
rs13234534 7 73232009 WBSCR27 ENSG00000165171.6 2.776E-12 0 24856 gtex_brain_ba24
rs10949829 7 73233342 WBSCR27 ENSG00000165171.6 2.839E-11 0 23523 gtex_brain_ba24
rs7804571 7 73233877 WBSCR27 ENSG00000165171.6 2.737E-10 0 22988 gtex_brain_ba24
rs4717819 7 73234962 WBSCR27 ENSG00000165171.6 3.063E-11 0 21903 gtex_brain_ba24
rs7384832 7 73235141 WBSCR27 ENSG00000165171.6 9.691E-10 0 21724 gtex_brain_ba24
rs4717820 7 73236266 WBSCR27 ENSG00000165171.6 1.754E-12 0 20599 gtex_brain_ba24
rs13223112 7 73236508 WBSCR27 ENSG00000165171.6 3.099E-12 0 20357 gtex_brain_ba24
rs6946037 7 73236715 WBSCR27 ENSG00000165171.6 2.653E-12 0 20150 gtex_brain_ba24
rs13234080 7 73237631 WBSCR27 ENSG00000165171.6 1.814E-12 0 19234 gtex_brain_ba24
rs7798477 7 73238330 WBSCR27 ENSG00000165171.6 1.838E-12 0 18535 gtex_brain_ba24
rs7798641 7 73238428 WBSCR27 ENSG00000165171.6 1.841E-12 0 18437 gtex_brain_ba24
rs13228435 7 73239172 WBSCR27 ENSG00000165171.6 1.865E-12 0 17693 gtex_brain_ba24
rs4255023 7 73239618 WBSCR27 ENSG00000165171.6 2.796E-12 0 17247 gtex_brain_ba24
rs7808268 7 73240171 WBSCR27 ENSG00000165171.6 1.88E-12 0 16694 gtex_brain_ba24
rs7808585 7 73240296 WBSCR27 ENSG00000165171.6 2.796E-12 0 16569 gtex_brain_ba24
rs4717109 7 73240991 WBSCR27 ENSG00000165171.6 1.88E-12 0 15874 gtex_brain_ba24
rs4717821 7 73240993 WBSCR27 ENSG00000165171.6 2.796E-12 0 15872 gtex_brain_ba24
rs7455225 7 73241386 WBSCR27 ENSG00000165171.6 2.962E-10 0 15479 gtex_brain_ba24
rs66645350 7 73242908 WBSCR27 ENSG00000165171.6 9.951E-11 0 13957 gtex_brain_ba24
rs6974182 7 73242977 WBSCR27 ENSG00000165171.6 1.905E-12 0 13888 gtex_brain_ba24
rs6974378 7 73243139 WBSCR27 ENSG00000165171.6 1.88E-12 0 13726 gtex_brain_ba24
rs4717822 7 73243786 WBSCR27 ENSG00000165171.6 2.796E-12 0 13079 gtex_brain_ba24
rs7793169 7 73244214 WBSCR27 ENSG00000165171.6 1.88E-12 0 12651 gtex_brain_ba24
rs7793313 7 73244282 WBSCR27 ENSG00000165171.6 2.796E-12 0 12583 gtex_brain_ba24
rs4304220 7 73244761 WBSCR27 ENSG00000165171.6 2.796E-12 0 12104 gtex_brain_ba24
rs4640941 7 73245103 WBSCR27 ENSG00000165171.6 2.796E-12 0 11762 gtex_brain_ba24
rs4458741 7 73245179 WBSCR27 ENSG00000165171.6 1.88E-12 0 11686 gtex_brain_ba24
rs8629 7 73245519 WBSCR27 ENSG00000165171.6 1.88E-12 0 11346 gtex_brain_ba24
rs1127155 7 73246461 WBSCR27 ENSG00000165171.6 6.492E-12 0 10404 gtex_brain_ba24
rs1127156 7 73246496 WBSCR27 ENSG00000165171.6 1.88E-12 0 10369 gtex_brain_ba24
rs11316 7 73246555 WBSCR27 ENSG00000165171.6 2.796E-12 0 10310 gtex_brain_ba24
rs9691413 7 73247204 WBSCR27 ENSG00000165171.6 1.88E-12 0 9661 gtex_brain_ba24
rs6968360 7 73247732 WBSCR27 ENSG00000165171.6 6.492E-12 0 9133 gtex_brain_ba24
rs7786850 7 73248572 WBSCR27 ENSG00000165171.6 1.419E-12 0 8293 gtex_brain_ba24
rs4286826 7 73248586 WBSCR27 ENSG00000165171.6 1.418E-12 0 8279 gtex_brain_ba24
rs4473910 7 73248662 WBSCR27 ENSG00000165171.6 1.88E-12 0 8203 gtex_brain_ba24
rs13246460 7 73249165 WBSCR27 ENSG00000165171.6 1.88E-12 0 7700 gtex_brain_ba24
rs13232463 7 73249299 WBSCR27 ENSG00000165171.6 1.88E-12 0 7566 gtex_brain_ba24
rs147740582 7 73249450 WBSCR27 ENSG00000165171.6 2.571E-8 0 7415 gtex_brain_ba24
rs3923279 7 73251638 WBSCR27 ENSG00000165171.6 3.954E-9 0 5227 gtex_brain_ba24
rs1989670 7 73251919 WBSCR27 ENSG00000165171.6 9.415E-11 0 4946 gtex_brain_ba24
rs4484569 7 73252900 WBSCR27 ENSG00000165171.6 1.89E-12 0 3965 gtex_brain_ba24
rs4304218 7 73252980 WBSCR27 ENSG00000165171.6 2.813E-12 0 3885 gtex_brain_ba24
rs7811711 7 73253100 WBSCR27 ENSG00000165171.6 1.89E-12 0 3765 gtex_brain_ba24
rs7811317 7 73253107 WBSCR27 ENSG00000165171.6 1.89E-12 0 3758 gtex_brain_ba24
rs13247441 7 73253143 WBSCR27 ENSG00000165171.6 1.89E-12 0 3722 gtex_brain_ba24
rs10282443 7 73253243 WBSCR27 ENSG00000165171.6 1.89E-12 0 3622 gtex_brain_ba24
rs10252756 7 73253270 WBSCR27 ENSG00000165171.6 6.535E-12 0 3595 gtex_brain_ba24
rs13223593 7 73253772 WBSCR27 ENSG00000165171.6 1.88E-12 0 3093 gtex_brain_ba24
rs13241921 7 73254812 WBSCR27 ENSG00000165171.6 1.923E-12 0 2053 gtex_brain_ba24
rs13242043 7 73254910 WBSCR27 ENSG00000165171.6 2.866E-12 0 1955 gtex_brain_ba24
rs4333464 7 73255165 WBSCR27 ENSG00000165171.6 1.944E-12 0 1700 gtex_brain_ba24
rs4314544 7 73255252 WBSCR27 ENSG00000165171.6 1.948E-12 0 1613 gtex_brain_ba24
rs4717823 7 73255647 WBSCR27 ENSG00000165171.6 2.947E-12 0 1218 gtex_brain_ba24
rs10276377 7 73256838 WBSCR27 ENSG00000165171.6 2.098E-12 0 27 gtex_brain_ba24
rs10233067 7 73256920 WBSCR27 ENSG00000165171.6 2.133E-12 0 -55 gtex_brain_ba24
rs10233171 7 73256967 WBSCR27 ENSG00000165171.6 4.837E-7 0 -102 gtex_brain_ba24
rs7809965 7 73257901 WBSCR27 ENSG00000165171.6 2.419E-12 0 -1036 gtex_brain_ba24
rs201658367 7 73258086 WBSCR27 ENSG00000165171.6 3.329 e-12 0 -1221 gtex_brain_ba24
rs11763367 7 73258087 WBSCR27 ENSG00000165171.6 1.292E-10 0 -1222 gtex_brain_ba24
rs1073909 7 73258289 WBSCR27 ENSG00000165171.6 7.486E-12 0 -1424 gtex_brain_ba24
rs10225983 7 73258750 WBSCR27 ENSG00000165171.6 2.645E-12 0 -1885 gtex_brain_ba24
rs4301345 7 73259935 WBSCR27 ENSG00000165171.6 3.08E-12 0 -3070 gtex_brain_ba24
rs9647786 7 73260670 WBSCR27 ENSG00000165171.6 4.607E-12 0 -3805 gtex_brain_ba24
rs10234724 7 73261247 WBSCR27 ENSG00000165171.6 1.628E-11 0 -4382 gtex_brain_ba24
rs13221434 7 73261817 WBSCR27 ENSG00000165171.6 1.172E-10 0 -4952 gtex_brain_ba24
rs4994790 7 73263375 WBSCR27 ENSG00000165171.6 1.28E-10 0 -6510 gtex_brain_ba24
rs7804928 7 73264227 WBSCR27 ENSG00000165171.6 1.478E-10 0 -7362 gtex_brain_ba24
rs4717110 7 73265100 WBSCR27 ENSG00000165171.6 1.722E-10 0 -8235 gtex_brain_ba24
rs4717111 7 73265177 WBSCR27 ENSG00000165171.6 1.743E-10 0 -8312 gtex_brain_ba24
rs4717112 7 73265417 WBSCR27 ENSG00000165171.6 1.816E-10 0 -8552 gtex_brain_ba24
rs10271009 7 73266246 WBSCR27 ENSG00000165171.6 2.097E-10 0 -9381 gtex_brain_ba24
rs36133747 7 73266323 WBSCR27 ENSG00000165171.6 2.775E-10 0 -9458 gtex_brain_ba24
rs34946565 7 73266502 WBSCR27 ENSG00000165171.6 9.048E-10 0 -9637 gtex_brain_ba24
rs4341060 7 73267473 WBSCR27 ENSG00000165171.6 1.722E-9 0 -10608 gtex_brain_ba24
rs4327742 7 73267726 WBSCR27 ENSG00000165171.6 1.916E-9 0 -10861 gtex_brain_ba24
rs6944710 7 73269505 WBSCR27 ENSG00000165171.6 1.054E-8 0 -12640 gtex_brain_ba24
rs6949053 7 73269937 WBSCR27 ENSG00000165171.6 1.828E-8 0 -13072 gtex_brain_ba24
rs13229452 7 73270891 WBSCR27 ENSG00000165171.6 5.699E-8 0 -14026 gtex_brain_ba24
rs71082277 7 73272254 WBSCR27 ENSG00000165171.6 3.667E-8 0 -15389 gtex_brain_ba24
rs11763578 7 73272673 WBSCR27 ENSG00000165171.6 2.512E-8 0 -15808 gtex_brain_ba24
rs11764412 7 73272904 WBSCR27 ENSG00000165171.6 7.591E-8 0 -16039 gtex_brain_ba24
rs4717826 7 73273361 WBSCR27 ENSG00000165171.6 1.418E-7 0 -16496 gtex_brain_ba24
rs4324825 7 73275396 WBSCR27 ENSG00000165171.6 2.096E-8 0 -18531 gtex_brain_ba24
rs11770024 7 73275501 WBSCR27 ENSG00000165171.6 2.719E-7 0 -18636 gtex_brain_ba24
rs11770052 7 73275565 WBSCR27 ENSG00000165171.6 3.234E-7 0 -18700 gtex_brain_ba24
rs11767129 7 73275769 WBSCR27 ENSG00000165171.6 3.253E-7 0 -18904 gtex_brain_ba24
rs4717113 7 73276586 WBSCR27 ENSG00000165171.6 3.472E-7 0 -19721 gtex_brain_ba24
rs72466218 7 73149232 WBSCR27 ENSG00000165171.6 3.625E-7 0 107633 gtex_brain_putamen_basal
rs13233747 7 73149302 WBSCR27 ENSG00000165171.6 5.611E-6 0 107563 gtex_brain_putamen_basal
rs2293484 7 73151220 WBSCR27 ENSG00000165171.6 3.776E-7 0 105645 gtex_brain_putamen_basal
rs7782126 7 73154074 WBSCR27 ENSG00000165171.6 1.144E-7 0 102791 gtex_brain_putamen_basal
rs10232827 7 73155017 WBSCR27 ENSG00000165171.6 5.419E-7 0 101848 gtex_brain_putamen_basal
rs7806956 7 73155477 WBSCR27 ENSG00000165171.6 3.045E-7 0 101388 gtex_brain_putamen_basal
rs7807097 7 73155569 WBSCR27 ENSG00000165171.6 5.386E-7 0 101296 gtex_brain_putamen_basal
rs1880953 7 73157882 WBSCR27 ENSG00000165171.6 1.827E-7 0 98983 gtex_brain_putamen_basal
rs11981405 7 73162437 WBSCR27 ENSG00000165171.6 1.721E-7 0 94428 gtex_brain_putamen_basal
rs12539962 7 73167259 WBSCR27 ENSG00000165171.6 1.82E-7 0 89606 gtex_brain_putamen_basal
rs10949827 7 73172186 WBSCR27 ENSG00000165171.6 2.533E-9 0 84679 gtex_brain_putamen_basal
rs201728988 7 73172291 WBSCR27 ENSG00000165171.6 2.307E-10 0 84574 gtex_brain_putamen_basal
rs13237921 7 73178203 WBSCR27 ENSG00000165171.6 1.13E-6 0 78662 gtex_brain_putamen_basal
rs11764572 7 73178435 WBSCR27 ENSG00000165171.6 3.08E-6 0 78430 gtex_brain_putamen_basal
rs67424347 7 73179190 WBSCR27 ENSG00000165171.6 1.466E-6 0 77675 gtex_brain_putamen_basal
rs12536661 7 73182017 WBSCR27 ENSG00000165171.6 1.471E-6 0 74848 gtex_brain_putamen_basal
rs11979807 7 73182941 WBSCR27 ENSG00000165171.6 3.08E-6 0 73924 gtex_brain_putamen_basal
rs10709722 7 73183271 WBSCR27 ENSG00000165171.6 3.572E-11 0 73594 gtex_brain_putamen_basal
rs7084 7 73184435 WBSCR27 ENSG00000165171.6 1.18E-6 0 72430 gtex_brain_putamen_basal
rs6460054 7 73184534 WBSCR27 ENSG00000165171.6 3.321E-6 0 72331 gtex_brain_putamen_basal
rs7798722 7 73185562 WBSCR27 ENSG00000165171.6 6.459E-7 0 71303 gtex_brain_putamen_basal
rs28408072 7 73186172 WBSCR27 ENSG00000165171.6 3.08E-6 0 70693 gtex_brain_putamen_basal
rs373076749 7 73186336 WBSCR27 ENSG00000165171.6 1.181E-6 0 70529 gtex_brain_putamen_basal
rs6460055 7 73187517 WBSCR27 ENSG00000165171.6 2.814E-11 0 69348 gtex_brain_putamen_basal
rs4484568 7 73187651 WBSCR27 ENSG00000165171.6 3.08E-6 0 69214 gtex_brain_putamen_basal
rs4131376 7 73188318 WBSCR27 ENSG00000165171.6 3.08E-6 0 68547 gtex_brain_putamen_basal
rs11979680 7 73188574 WBSCR27 ENSG00000165171.6 1.248E-10 0 68291 gtex_brain_putamen_basal
rs10236342 7 73189279 WBSCR27 ENSG00000165171.6 2.8E-11 0 67586 gtex_brain_putamen_basal
rs6958663 7 73189302 WBSCR27 ENSG00000165171.6 2.8E-11 0 67563 gtex_brain_putamen_basal
rs188580753 7 73190651 WBSCR27 ENSG00000165171.6 4.908E-11 0 66214 gtex_brain_putamen_basal
rs6965004 7 73190705 WBSCR27 ENSG00000165171.6 1.127E-10 0 66160 gtex_brain_putamen_basal
rs6460056 7 73191226 WBSCR27 ENSG00000165171.6 2.775E-11 0 65639 gtex_brain_putamen_basal
rs200173952 7 73193149 WBSCR27 ENSG00000165171.6 1.272E-10 0 63716 gtex_brain_putamen_basal
rs71082262 7 73193150 WBSCR27 ENSG00000165171.6 5.488E-10 0 63715 gtex_brain_putamen_basal
rs6947264 7 73193995 WBSCR27 ENSG00000165171.6 2.749E-11 0 62870 gtex_brain_putamen_basal
rs4717815 7 73195661 WBSCR27 ENSG00000165171.6 1.251E-10 0 61204 gtex_brain_putamen_basal
rs7791308 7 73195989 WBSCR27 ENSG00000165171.6 3.097E-6 0 60876 gtex_brain_putamen_basal
rs4507641 7 73196890 WBSCR27 ENSG00000165171.6 2.803E-11 0 59975 gtex_brain_putamen_basal
rs199616383 7 73197425 WBSCR27 ENSG00000165171.6 3.456E-6 0 59440 gtex_brain_putamen_basal
rs112396404 7 73197439 WBSCR27 ENSG00000165171.6 1.588E-6 0 59426 gtex_brain_putamen_basal
rs374816454 7 73198026 WBSCR27 ENSG00000165171.6 5.805E-6 0 58839 gtex_brain_putamen_basal
rs6979031 7 73198616 WBSCR27 ENSG00000165171.6 4.127E-6 0 58249 gtex_brain_putamen_basal
rs7803827 7 73200287 WBSCR27 ENSG00000165171.6 3.829E-6 0 56578 gtex_brain_putamen_basal
rs10250310 7 73201128 WBSCR27 ENSG00000165171.6 5.7E-6 0 55737 gtex_brain_putamen_basal
rs3886187 7 73205363 WBSCR27 ENSG00000165171.6 1.013E-8 0 51502 gtex_brain_putamen_basal
rs6952976 7 73209016 WBSCR27 ENSG00000165171.6 2.463E-11 0 47849 gtex_brain_putamen_basal
rs7792129 7 73210413 WBSCR27 ENSG00000165171.6 4.189E-11 0 46452 gtex_brain_putamen_basal
rs7777044 7 73210778 WBSCR27 ENSG00000165171.6 5.115E-11 0 46087 gtex_brain_putamen_basal
rs59078068 7 73210912 WBSCR27 ENSG00000165171.6 8.718E-7 0 45953 gtex_brain_putamen_basal
rs7777704 7 73210977 WBSCR27 ENSG00000165171.6 3.553E-11 0 45888 gtex_brain_putamen_basal
rs7778187 7 73211329 WBSCR27 ENSG00000165171.6 6.269E-7 0 45536 gtex_brain_putamen_basal
rs56050846 7 73211781 WBSCR27 ENSG00000165171.6 2.166E-8 0 45084 gtex_brain_putamen_basal
rs28414777 7 73212647 WBSCR27 ENSG00000165171.6 3.704E-11 0 44218 gtex_brain_putamen_basal
rs12537291 7 73212929 WBSCR27 ENSG00000165171.6 3.665E-11 0 43936 gtex_brain_putamen_basal
rs4632942 7 73213712 WBSCR27 ENSG00000165171.6 3.465E-11 0 43153 gtex_brain_putamen_basal
rs10223902 7 73214382 WBSCR27 ENSG00000165171.6 3.346E-11 0 42483 gtex_brain_putamen_basal
rs12668451 7 73214999 WBSCR27 ENSG00000165171.6 4.656E-10 0 41866 gtex_brain_putamen_basal
rs10949828 7 73216733 WBSCR27 ENSG00000165171.6 4.433E-10 0 40132 gtex_brain_putamen_basal
rs13232536 7 73219508 WBSCR27 ENSG00000165171.6 1.734E-9 0 37357 gtex_brain_putamen_basal
rs150887167 7 73220024 WBSCR27 ENSG00000165171.6 9.93E-12 0 36841 gtex_brain_putamen_basal
rs7796554 7 73220040 WBSCR27 ENSG00000165171.6 1.217E-11 0 36825 gtex_brain_putamen_basal
rs6460060 7 73221042 WBSCR27 ENSG00000165171.6 2.498E-10 0 35823 gtex_brain_putamen_basal
rs140830236 7 73222775 WBSCR27 ENSG00000165171.6 1.972E-9 0 34090 gtex_brain_putamen_basal
rs35558014 7 73223077 WBSCR27 ENSG00000165171.6 6.748平台以及 0 33788 gtex_brain_putamen_basal
rs367896180 7 73223371 WBSCR27 ENSG00000165171.6 7.47E-10 0 33494 gtex_brain_putamen_basal
rs7812097 7 73223473 WBSCR27 ENSG00000165171.6 3.269E-10 0 33392 gtex_brain_putamen_basal
rs4440516 7 73224041 WBSCR27 ENSG00000165171.6 1.818E-9 0 32824 gtex_brain_putamen_basal
rs7781973 7 73224718 WBSCR27 ENSG00000165171.6 1.782E-9 0 32147 gtex_brain_putamen_basal
rs4355658 7 73225692 WBSCR27 ENSG00000165171.6 2.681E-10 0 31173 gtex_brain_putamen_basal
rs9647713 7 73226807 WBSCR27 ENSG00000165171.6 4.143E-7 0 30058 gtex_brain_putamen_basal
rs11762644 7 73230944 WBSCR27 ENSG00000165171.6 3.492E-9 0 25921 gtex_brain_putamen_basal
rs13234534 7 73232009 WBSCR27 ENSG00000165171.6 4.389E-9 0 24856 gtex_brain_putamen_basal
rs10949829 7 73233342 WBSCR27 ENSG00000165171.6 3.549E-8 0 23523 gtex_brain_putamen_basal
rs7804571 7 73233877 WBSCR27 ENSG00000165171.6 1.044E-7 0 22988 gtex_brain_putamen_basal
rs4717819 7 73234962 WBSCR27 ENSG00000165171.6 2.487E-9 0 21903 gtex_brain_putamen_basal
rs7384832 7 73235141 WBSCR27 ENSG00000165171.6 3.289E-7 0 21724 gtex_brain_putamen_basal
rs4717820 7 73236266 WBSCR27 ENSG00000165171.6 9.103E-10 0 20599 gtex_brain_putamen_basal
rs13223112 7 73236508 WBSCR27 ENSG00000165171.6 6.753E-10 0 20357 gtex_brain_putamen_basal
rs6946037 7 73236715 WBSCR27 ENSG00000165171.6 5.646E-10 0 20150 gtex_brain_putamen_basal
rs13234080 7 73237631 WBSCR27 ENSG00000165171.6 9.331E-10 0 19234 gtex_brain_putamen_basal
rs7798477 7 73238330 WBSCR27 ENSG00000165171.6 9.404E-10 0 18535 gtex_brain_putamen_basal
rs7798641 7 73238428 WBSCR27 ENSG00000165171.6 9.412E-10 0 18437 gtex_brain_putamen_basal
rs13228435 7 73239172 WBSCR27 ENSG00000165171.6 9.487E-10 0 17693 gtex_brain_putamen_basal
rs4255023 7 73239618 WBSCR27 ENSG00000165171.6 5.93E-10 0 17247 gtex_brain_putamen_basal
rs7808268 7 73240171 WBSCR27 ENSG00000165171.6 9.013E-10 0 16694 gtex_brain_putamen_basal
rs7808585 7 73240296 WBSCR27 ENSG00000165171.6 5.504E-10 0 16569 gtex_brain_putamen_basal
rs4717109 7 73240991 WBSCR27 ENSG00000165171.6 8.307E-10 0 15874 gtex_brain_putamen_basal
rs4717821 7 73240993 WBSCR27 ENSG00000165171.6 5.111E-10 0 15872 gtex_brain_putamen_basal
rs7455225 7 73241386 WBSCR27 ENSG00000165171.6 1.162E-7 0 15479 gtex_brain_putamen_basal
rs10949830 7 73242275 WBSCR27 ENSG00000165171.6 1.74E-7 0 14590 gtex_brain_putamen_basal
rs66645350 7 73242908 WBSCR27 ENSG00000165171.6 6.375E-9 0 13957 gtex_brain_putamen_basal
rs6974182 7 73242977 WBSCR27 ENSG00000165171.6 6.556E-10 0 13888 gtex_brain_putamen_basal
rs6974378 7 73243139 WBSCR27 ENSG00000165171.6 7.11E-10 0 13726 gtex_brain_putamen_basal
rs4717822 7 73243786 WBSCR27 ENSG00000165171.6 3.744E-10 0 13079 gtex_brain_putamen_basal
rs7793169 7 73244214 WBSCR27 ENSG00000165171.6 5.082平台以及 0 12651 gtex_brain_putamen_basal
rs7793313 7 73244282 WBSCR27 ENSG00000165171.6 2.864E-10 0 12583 gtex_brain_putamen_basal
rs4304220 7 73244761 WBSCR27 ENSG00000165171.6 2.04E-10 0 12104 gtex_brain_putamen_basal
rs4640941 7 73245103 WBSCR27 ENSG00000165171.6 1.626E-10 0 11762 gtex_brain_putamen_basal
rs4458741 7 73245179 WBSCR27 ENSG00000165171.6 2.636E-10 0 11686 gtex_brain_putamen_basal
rs8629 7 73245519 WBSCR27 ENSG00000165171.6 1.131E-10 0 11346 gtex_brain_putamen_basal
rs1127155 7 73246461 WBSCR27 ENSG00000165171.6 1.674E-12 0 10404 gtex_brain_putamen_basal
rs1127156 7 73246496 WBSCR27 ENSG00000165171.6 1.131E-10 0 10369 gtex_brain_putamen_basal
rs11316 7 73246555 WBSCR27 ENSG00000165171.6 5.916E-11 0 10310 gtex_brain_putamen_basal
rs9691413 7 73247204 WBSCR27 ENSG00000165171.6 1.131E-10 0 9661 gtex_brain_putamen_basal
rs6968360 7 73247732 WBSCR27 ENSG00000165171.6 1.674E-12 0 9133 gtex_brain_putamen_basal
rs7786850 7 73248572 WBSCR27 ENSG00000165171.6 1.138E-10 0 8293 gtex_brain_putamen_basal
rs4286826 7 73248586 WBSCR27 ENSG00000165171.6 1.176E-10 0 8279 gtex_brain_putamen_basal
rs4473910 7 73248662 WBSCR27 ENSG00000165171.6 1.131E-10 0 8203 gtex_brain_putamen_basal
rs13246460 7 73249165 WBSCR27 ENSG00000165171.6 1.131E-10 0 7700 gtex_brain_putamen_basal
rs13232463 7 73249299 WBSCR27 ENSG00000165171.6 1.131E-10 0 7566 gtex_brain_putamen_basal
rs147740582 7 73249450 WBSCR27 ENSG00000165171.6 1.313E-10 0 7415 gtex_brain_putamen_basal
rs3923279 7 73251638 WBSCR27 ENSG00000165171.6 3.021E-10 0 5227 gtex_brain_putamen_basal
rs1989670 7 73251919 WBSCR27 ENSG00000165171.6 5.998E-10 0 4946 gtex_brain_putamen_basal
rs4484569 7 73252900 WBSCR27 ENSG00000165171.6 1.131E-10 0 3965 gtex_brain_putamen_basal
rs4304218 7 73252980 WBSCR27 ENSG00000165171.6 5.916E-11 0 3885 gtex_brain_putamen_basal
rs7811711 7 73253100 WBSCR27 ENSG00000165171.6 1.131E-10 0 3765 gtex_brain_putamen_basal
rs7811317 7 73253107 WBSCR27 ENSG00000165171.6 1.131E-10 0 3758 gtex_brain_putamen_basal
rs13247441 7 73253143 WBSCR27 ENSG00000165171.6 1.131E-10 0 3722 gtex_brain_putamen_basal
rs10282443 7 73253243 WBSCR27 ENSG00000165171.6 1.131E-10 0 3622 gtex_brain_putamen_basal
rs10252756 7 73253270 WBSCR27 ENSG00000165171.6 1.674E-12 0 3595 gtex_brain_putamen_basal
rs13223593 7 73253772 WBSCR27 ENSG00000165171.6 1.131E-10 0 3093 gtex_brain_putamen_basal
rs13241921 7 73254812 WBSCR27 ENSG00000165171.6 1.097E-10 0 2053 gtex_brain_putamen_basal
rs13242043 7 73254910 WBSCR27 ENSG00000165171.6 5.979E-11 0 1955 gtex_brain_putamen_basal
rs4333464 7 73255165 WBSCR27 ENSG00000165171.6 1.083E-10 0 1700 gtex_brain_putamen_basal
rs4314544 7 73255252 WBSCR27 ENSG00000165171.6 1.08E-10 0 1613 gtex_brain_putamen_basal
rs4717823 7 73255647 WBSCR27 ENSG00000165171.6 5.633E-11 0 1218 gtex_brain_putamen_basal
rs10276377 7 73256838 WBSCR27 ENSG00000165171.6 1.03E-10 0 27 gtex_brain_putamen_basal
rs10233067 7 73256920 WBSCR27 ENSG00000165171.6 1.049E-10 0 -55 gtex_brain_putamen_basal
rs10233171 7 73256967 WBSCR27 ENSG00000165171.6 1.944E-6 0 -102 gtex_brain_putamen_basal
rs7809965 7 73257901 WBSCR27 ENSG00000165171.6 1.012E-10 0 -1036 gtex_brain_putamen_basal
rs201658367 7 73258086 WBSCR27 ENSG00000165171.6 6.535E-11 0 -1221 gtex_brain_putamen_basal
rs11763367 7 73258087 WBSCR27 ENSG00000165171.6 6.454E-11 0 -1222 gtex_brain_putamen_basal
rs1073909 7 73258289 WBSCR27 ENSG00000165171.6 1.302E-12 0 -1424 gtex_brain_putamen_basal
rs4262227 7 73258638 WBSCR27 ENSG00000165171.6 5.616E-8 0 -1773 gtex_brain_putamen_basal
rs10225983 7 73258750 WBSCR27 ENSG00000165171.6 8.85E-11 0 -1885 gtex_brain_putamen_basal
rs4301345 7 73259935 WBSCR27 ENSG00000165171.6 9.402E-11 0 -3070 gtex_brain_putamen_basal
rs9647786 7 73260670 WBSCR27 ENSG00000165171.6 6.1E-11 0 -3805 gtex_brain_putamen_basal
rs10234724 7 73261247 WBSCR27 ENSG00000165171.6 9.179E-11 0 -4382 gtex_brain_putamen_basal
rs13221434 7 73261817 WBSCR27 ENSG00000165171.6 1.897E-12 0 -4952 gtex_brain_putamen_basal
rs5884924 7 73263039 WBSCR27 ENSG00000165171.6 4.124E-7 0 -6174 gtex_brain_putamen_basal
rs4994790 7 73263375 WBSCR27 ENSG00000165171.6 2.611E-10 0 -6510 gtex_brain_putamen_basal
rs7804928 7 73264227 WBSCR27 ENSG00000165171.6 1.94E-10 0 -7362 gtex_brain_putamen_basal
rs4717110 7 73265100 WBSCR27 ENSG00000165171.6 1.928E-10 0 -8235 gtex_brain_putamen_basal
rs4717111 7 73265177 WBSCR27 ENSG00000165171.6 1.705E-10 0 -8312 gtex_brain_putamen_basal
rs4717112 7 73265417 WBSCR27 ENSG00000165171.6 1.92E-10 0 -8552 gtex_brain_putamen_basal
rs10271009 7 73266246 WBSCR27 ENSG00000165171.6 1.903E-10 0 -9381 gtex_brain_putamen_basal
rs36133747 7 73266323 WBSCR27 ENSG00000165171.6 1.685E-10 0 -9458 gtex_brain_putamen_basal
rs34946565 7 73266502 WBSCR27 ENSG00000165171.6 3.382E-10 0 -9637 gtex_brain_putamen_basal
rs4341060 7 73267473 WBSCR27 ENSG00000165171.6 7.951E-10 0 -10608 gtex_brain_putamen_basal
rs4327742 7 73267726 WBSCR27 ENSG00000165171.6 5.208E-10 0 -10861 gtex_brain_putamen_basal
rs6944710 7 73269505 WBSCR27 ENSG00000165171.6 1.325E-8 0 -12640 gtex_brain_putamen_basal
rs6949053 7 73269937 WBSCR27 ENSG00000165171.6 1.89E-11 0 -13072 gtex_brain_putamen_basal
rs13229452 7 73270891 WBSCR27 ENSG00000165171.6 6.888E-7 0 -14026 gtex_brain_putamen_basal
rs71082277 7 73272254 WBSCR27 ENSG00000165171.6 6.564E-9 0 -15389 gtex_brain_putamen_basal
rs11763578 7 73272673 WBSCR27 ENSG00000165171.6 6.494E-9 0 -15808 gtex_brain_putamen_basal
rs11764412 7 73272904 WBSCR27 ENSG00000165171.6 1.512E-9 0 -16039 gtex_brain_putamen_basal
rs4717826 7 73273361 WBSCR27 ENSG00000165171.6 5.44E-11 0 -16496 gtex_brain_putamen_basal
rs61437588 7 73274384 WBSCR27 ENSG00000165171.6 2.034E-6 0 -17519 gtex_brain_putamen_basal
rs4324825 7 73275396 WBSCR27 ENSG00000165171.6 2.67E-7 0 -18531 gtex_brain_putamen_basal
rs11770024 7 73275501 WBSCR27 ENSG00000165171.6 2.57E-8 0 -18636 gtex_brain_putamen_basal
rs11770052 7 73275565 WBSCR27 ENSG00000165171.6 2.333E-8 0 -18700 gtex_brain_putamen_basal
rs11767129 7 73275769 WBSCR27 ENSG00000165171.6 2.338E-8 0 -18904 gtex_brain_putamen_basal
rs4717113 7 73276586 WBSCR27 ENSG00000165171.6 2.469E-8 0 -19721 gtex_brain_putamen_basal

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway name Pathway size # SZGR 2.0 genes in pathway Info
DODD NASOPHARYNGEAL CARCINOMA UP 1821 933 All SZGR 2.0 genes in this pathway
GRAESSMANN APOPTOSIS BY DOXORUBICIN DN 1781 1082 All SZGR 2.0 genes in this pathway
GAUSSMANN MLL AF4 FUSION TARGETS C UP 170 114 All SZGR 2.0 genes in this pathway
SCHAEFFER PROSTATE DEVELOPMENT 48HR UP 487 286 All SZGR 2.0 genes in this pathway
MARSON BOUND BY FOXP3 UNSTIMULATED 1229 713 All SZGR 2.0 genes in this pathway
MARTENS TRETINOIN RESPONSE UP 857 456 All SZGR 2.0 genes in this pathway
LEE BMP2 TARGETS UP 745 475 All SZGR 2.0 genes in this pathway
DELACROIX RAR BOUND ES 462 273 All SZGR 2.0 genes in this pathway