基因页:lars2
Summary?
基因 | 23395 |
Symbol | lars2 |
Synonyms | leurs | prlts4 | mtleurs |
Description | leucyl-tRNA synthetase 2, mitochondrial |
Reference | MIM:604544|HGNC:HGNC:17095|ENSEMBL:ENSG00000011376|HPRD:05178|Vega:OTTHUMG00000133177 |
Gene type | 蛋白质编码 |
地图位置 | 3p21.3 |
Pascal p-value | 0.331 |
Sherlock P值 | 0.905 |
胎儿β | -0.476 |
DMG | 1(#研究) |
主持人 | 前扣带回皮层BA24 尾状基底神经节 Cortex Frontal Cortex BA9 Hippocampus Hypothalamus Nucleus accumbens basal ganglia Putamen basal ganglia 元 |
支持 | COMPOSITESET Darnell FMRP目标 Ascano FMRP targets |
Gene in Data Sources
Gene set name | Method of gene set | Description | 信息 |
---|---|---|---|
CV:PGCnp | 全基因组协会研究 | GWAS | |
DMG:Nishioka_2013 | 全基因组DNA甲基化分析 | 作者研究了来自18例第一期精神分裂症(FESZ)和15个正常对照的18例外周血细胞中DNA的甲基化谱。 | 1 |
PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
文学 | High-throughput literature-search | 与精神分裂症关键词共同存在:精神分裂症,精神分裂症 | 点击显示详细信息 |
部分即遗传学和表观遗传学注释
差异甲基化基因
探测 | Chromosome | Position | 最近的基因 | p(dis) | beta(dis) | fdr(dis) | 学习 |
---|---|---|---|---|---|---|---|
CG18294881 | 3 | 45429876 | lars2 | -0.024 | 0.58 | DMG:Nishioka_2013 |
EQTL注释
SNP ID | Chromosome | Position | 主持人 | Gene Entrez ID | PVALUE | QVALUE | TSS距离 | EQTL类型 |
---|---|---|---|---|---|---|---|---|
rs4683113 | 3 | 45475333 | lars2 | ENSG00000011376.5 | 1.961E-6 | 0 | 45335 | gtex_brain_ba24 |
RS34394405 | 3 | 45477226 | lars2 | ENSG00000011376.5 | 1.94E-6 | 0 | 47228 | gtex_brain_ba24 |
RS11130062 | 3 | 45480858 | lars2 | ENSG00000011376.5 | 1.866E-6 | 0 | 50860 | gtex_brain_ba24 |
rs4311249 | 3 | 45483463 | lars2 | ENSG00000011376.5 | 1.793E-6 | 0 | 53465 | gtex_brain_ba24 |
rs13063737 | 3 | 45486302 | lars2 | ENSG00000011376.5 | 1.767E-6 | 0 | 56304 | gtex_brain_ba24 |
rs11929342 | 3 | 45492119 | lars2 | ENSG00000011376.5 | 1.256E-7 | 0 | 62121 | gtex_brain_ba24 |
rs4683114 | 3 | 45492685 | lars2 | ENSG00000011376.5 | 7.302E-7 | 0 | 62687 | gtex_brain_ba24 |
RS11130063 | 3 | 45493862 | lars2 | ENSG00000011376.5 | 2.683E-9 | 0 | 63864 | gtex_brain_ba24 |
RS2138209 | 3 | 45493941 | lars2 | ENSG00000011376.5 | 7.945E-11 | 0 | 63943 | gtex_brain_ba24 |
rs1399703 | 3 | 45495358 | lars2 | ENSG00000011376.5 | 1.823E-10 | 0 | 65360 | gtex_brain_ba24 |
RS375827681 | 3 | 45495927 | lars2 | ENSG00000011376.5 | 5.373E-10 | 0 | 65929 | gtex_brain_ba24 |
RS1877960 | 3 | 45496144 | lars2 | ENSG00000011376.5 | 4.06e-10 | 0 | 66146 | gtex_brain_ba24 |
RS965238 | 3 | 45497671 | lars2 | ENSG00000011376.5 | 2.824E-10 | 0 | 67673 | gtex_brain_ba24 |
RS1812600 | 3 | 45497947 | lars2 | ENSG00000011376.5 | 2.735E-9 | 0 | 67949 | gtex_brain_ba24 |
RS6768340 | 3 | 45498342 | lars2 | ENSG00000011376.5 | 1.823E-10 | 0 | 68344 | gtex_brain_ba24 |
rs6771080 | 3 | 45498726 | lars2 | ENSG00000011376.5 | 2.755E-9 | 0 | 68728 | gtex_brain_ba24 |
RS1949304 | 3 | 45500950 | lars2 | ENSG00000011376.5 | 2.755E-9 | 0 | 70952 | gtex_brain_ba24 |
RS1949303 | 3 | 45501088 | lars2 | ENSG00000011376.5 | 2.255E-10 | 0 | 71090 | gtex_brain_ba24 |
rs900326 | 3 | 45503893 | lars2 | ENSG00000011376.5 | 2.754e-9 | 0 | 73895 | gtex_brain_ba24 |
rs3774692 | 3 | 45507305 | lars2 | ENSG00000011376.5 | 2.056E-10 | 0 | 77307 | gtex_brain_ba24 |
rs4683116 | 3 | 45508718 | lars2 | ENSG00000011376.5 | 2.757E-9 | 0 | 78720 | gtex_brain_ba24 |
RS11921901 | 3 | 45509736 | lars2 | ENSG00000011376.5 | 2.765E-9 | 0 | 79738 | gtex_brain_ba24 |
rs3774690 | 3 | 45511026 | lars2 | ENSG00000011376.5 | 2.545e-13 | 0 | 81028 | gtex_brain_ba24 |
rs3796364 | 3 | 45511266 | lars2 | ENSG00000011376.5 | 7.078e-13 | 0 | 81268 | gtex_brain_ba24 |
RS11919039 | 3 | 45515648 | lars2 | ENSG00000011376.5 | 3.547e-11 | 0 | 85650 | gtex_brain_ba24 |
rs12487705 | 3 | 45517759 | lars2 | ENSG00000011376.5 | 3.612E-11 | 0 | 87761 | gtex_brain_ba24 |
rs12639021 | 3 | 45526812 | lars2 | ENSG00000011376.5 | 2.495E-13 | 0 | 96814 | gtex_brain_ba24 |
rs13088061 | 3 | 45528423 | lars2 | ENSG00000011376.5 | 2.495E-13 | 0 | 98425 | gtex_brain_ba24 |
RS11130066 | 3 | 45528997 | lars2 | ENSG00000011376.5 | 3.606E-11 | 0 | 98999 | gtex_brain_ba24 |
RS1817489 | 3 | 45529692 | lars2 | ENSG00000011376.5 | 3.61e-11 | 0 | 99694 | gtex_brain_ba24 |
RS1825212 | 3 | 45529896 | lars2 | ENSG00000011376.5 | 3.612E-11 | 0 | 99898 | gtex_brain_ba24 |
RS3733116 | 3 | 45530401 | lars2 | ENSG00000011376.5 | 3.616E-11 | 0 | 100403 | gtex_brain_ba24 |
RS13070575 | 3 | 45534973 | lars2 | ENSG00000011376.5 | 2.489E-13 | 0 | 104975 | gtex_brain_ba24 |
RS3774684 | 3 | 45535941 | lars2 | ENSG00000011376.5 | 3.64e-11 | 0 | 105943 | gtex_brain_ba24 |
RS3733115 | 3 | 45537414 | lars2 | ENSG00000011376.5 | 2.469E-8 | 0 | 107416 | gtex_brain_ba24 |
rs12638088 | 3 | 45537973 | lars2 | ENSG00000011376.5 | 2.488e-13 | 0 | 107975 | gtex_brain_ba24 |
RS11721185 | 3 | 45539685 | lars2 | ENSG00000011376.5 | 3.652e-11 | 0 | 109687 | gtex_brain_ba24 |
rs2306522 | 3 | 45542083 | lars2 | ENSG00000011376.5 | 3.662e-11 | 0 | 112085 | gtex_brain_ba24 |
rs12629394 | 3 | 45545451 | lars2 | ENSG00000011376.5 | 4.394E-13 | 0 | 115453 | gtex_brain_ba24 |
rs35269084 | 3 | 45546577 | lars2 | ENSG00000011376.5 | 2.483E-13 | 0 | 116579 | gtex_brain_ba24 |
RS2170546 | 3 | 45549298 | lars2 | ENSG00000011376.5 | 4.394E-13 | 0 | 119300 | gtex_brain_ba24 |
rs900324 | 3 | 45549807 | lars2 | ENSG00000011376.5 | 2.483E-13 | 0 | 119809 | gtex_brain_ba24 |
rs1110778 | 3 | 45550661 | lars2 | ENSG00000011376.5 | 1.825e-12 | 0 | 120663 | gtex_brain_ba24 |
rs12633889 | 3 | 45551898 | lars2 | ENSG00000011376.5 | 2.484E-13 | 0 | 121900 | gtex_brain_ba24 |
RS2291237 | 3 | 45555044 | lars2 | ENSG00000011376.5 | 3.459E-11 | 0 | 125046 | gtex_brain_ba24 |
RS34058819 | 3 | 45555700 | lars2 | ENSG00000011376.5 | 2.595E-13 | 0 | 125702 | gtex_brain_ba24 |
rs17077951 | 3 | 45555765 | lars2 | ENSG00000011376.5 | 2.596E-13 | 0 | 125767 | gtex_brain_ba24 |
RS10510746 | 3 | 45557003 | lars2 | ENSG00000011376.5 | 3.368e-11 | 0 | 127005 | gtex_brain_ba24 |
RS11549809 | 3 | 45557707 | lars2 | ENSG00000011376.5 | 2.809E-13 | 0 | 127709 | gtex_brain_ba24 |
rs2276860 | 3 | 45559621 | lars2 | ENSG00000011376.5 | 2.746E-13 | 0 | 129623 | gtex_brain_ba24 |
rs12630693 | 3 | 45560113 | lars2 | ENSG00000011376.5 | 2.765e-13 | 0 | 130115 | gtex_brain_ba24 |
rs11717056 | 3 | 45560855 | lars2 | ENSG00000011376.5 | 8.742E-10 | 0 | 130857 | gtex_brain_ba24 |
rs113936742 | 3 | 45561149 | lars2 | ENSG00000011376.5 | 9.051E-13 | 0 | 131151 | gtex_brain_ba24 |
rs6441920 | 3 | 45561203 | lars2 | ENSG00000011376.5 | 2.807E-13 | 0 | 131205 | gtex_brain_ba24 |
rs267224 | 3 | 45561487 | lars2 | ENSG00000011376.5 | 3.338E-11 | 0 | 131489 | gtex_brain_ba24 |
rs267222 | 3 | 45564003 | lars2 | ENSG00000011376.5 | 3.338E-11 | 0 | 134005 | gtex_brain_ba24 |
rs12630334 | 3 | 45564439 | lars2 | ENSG00000011376.5 | 2.938e-13 | 0 | 134441 | gtex_brain_ba24 |
rs7626059 | 3 | 45564879 | lars2 | ENSG00000011376.5 | 3.34E-11 | 0 | 134881 | gtex_brain_ba24 |
RS2624668 | 3 | 45567557 | lars2 | ENSG00000011376.5 | 3.328E-11 | 0 | 137559 | gtex_brain_ba24 |
rs13099924 | 3 | 45569582 | lars2 | ENSG00000011376.5 | 3.2E-13 | 0 | 139584 | gtex_brain_ba24 |
rs35131533 | 3 | 45570065 | lars2 | ENSG00000011376.5 | 3.216E-13 | 0 | 140067 | gtex_brain_ba24 |
RS11706785 | 3 | 45571080 | lars2 | ENSG00000011376.5 | 2.481E-8 | 0 | 141082 | gtex_brain_ba24 |
rs2578672 | 3 | 45572977 | lars2 | ENSG00000011376.5 | 3.33E-11 | 0 | 142979 | gtex_brain_ba24 |
RS2624665 | 3 | 45572979 | lars2 | ENSG00000011376.5 | 3.33E-11 | 0 | 142981 | gtex_brain_ba24 |
rs2578670 | 3 | 45573466 | lars2 | ENSG00000011376.5 | 3.328E-11 | 0 | 143468 | gtex_brain_ba24 |
rs2578669 | 3 | 45573541 | lars2 | ENSG00000011376.5 | 3.328E-11 | 0 | 143543 | gtex_brain_ba24 |
rs61286189 | 3 | 45579533 | lars2 | ENSG00000011376.5 | 2.076E-11 | 0 | 149535 | gtex_brain_ba24 |
rs34622472 | 3 | 45579699 | lars2 | ENSG00000011376.5 | 2.128E-11 | 0 | 149701 | gtex_brain_ba24 |
rs17077990 | 3 | 45581959 | lars2 | ENSG00000011376.5 | 3.017E-11 | 0 | 151961 | gtex_brain_ba24 |
rs267256 | 3 | 45587111 | lars2 | ENSG00000011376.5 | 6.642e-10 | 0 | 157113 | gtex_brain_ba24 |
RS3821895 | 3 | 45587983 | lars2 | ENSG00000011376.5 | 1.601E-11 | 0 | 157985 | gtex_brain_ba24 |
rs267270 | 3 | 45593237 | lars2 | ENSG00000011376.5 | 2.009e-11 | 0 | 163239 | gtex_brain_ba24 |
rs267271 | 3 | 45593969 | lars2 | ENSG00000011376.5 | 1.677E-11 | 0 | 163971 | gtex_brain_ba24 |
rs267272 | 3 | 45594122 | lars2 | ENSG00000011376.5 | 1.64E-8 | 0 | 164124 | gtex_brain_ba24 |
rs267273 | 3 | 45594983 | lars2 | ENSG00000011376.5 | 3.231e-11 | 0 | 164985 | gtex_brain_ba24 |
rs267274 | 3 | 45595006 | lars2 | ENSG00000011376.5 | 5.408e-11 | 0 | 165008 | gtex_brain_ba24 |
rs267275 | 3 | 45595459 | lars2 | ENSG00000011376.5 | 9.165E-13 | 0 | 165461 | gtex_brain_ba24 |
rs267277 | 3 | 45597610 | lars2 | ENSG00000011376.5 | 1.387E-7 | 0 | 167612 | gtex_brain_ba24 |
rs267278 | 3 | 45598099 | lars2 | ENSG00000011376.5 | 1.811E-7 | 0 | 168101 | gtex_brain_ba24 |
rs267279 | 3 | 45598475 | lars2 | ENSG00000011376.5 | 1.116E-6 | 0 | 168477 | gtex_brain_ba24 |
rs267280 | 3 | 45598744 | lars2 | ENSG00000011376.5 | 1.811E-7 | 0 | 168746 | gtex_brain_ba24 |
rs267282 | 3 | 45598919 | lars2 | ENSG00000011376.5 | 1.811E-7 | 0 | 168921 | gtex_brain_ba24 |
rs4575933 | 3 | 45599419 | lars2 | ENSG00000011376.5 | 1.811E-7 | 0 | 169421 | gtex_brain_ba24 |
rs267283 | 3 | 45599906 | lars2 | ENSG00000011376.5 | 1.811E-7 | 0 | 169908 | gtex_brain_ba24 |
rs174818 | 3 | 45600530 | lars2 | ENSG00000011376.5 | 1.892E-7 | 0 | 170532 | gtex_brain_ba24 |
rs267257 | 3 | 45600868 | lars2 | ENSG00000011376.5 | 5.116E-7 | 0 | 170870 | gtex_brain_ba24 |
rs267259 | 3 | 45601218 | lars2 | ENSG00000011376.5 | 2.674E-9 | 0 | 171220 | gtex_brain_ba24 |
rs267260 | 3 | 45601252 | lars2 | ENSG00000011376.5 | 2.674E-9 | 0 | 171254 | gtex_brain_ba24 |
rs267261 | 3 | 45601597 | lars2 | ENSG00000011376.5 | 2.666E-9 | 0 | 171599 | gtex_brain_ba24 |
rs13083568 | 3 | 45602225 | lars2 | ENSG00000011376.5 | 1.609E-8 | 0 | 172227 | gtex_brain_ba24 |
rs35345735 | 3 | 45602836 | lars2 | ENSG00000011376.5 | 1.675E-7 | 0 | 172838 | gtex_brain_ba24 |
RS71617895 | 3 | 45603310 | lars2 | ENSG00000011376.5 | 1.372E-7 | 0 | 173312 | gtex_brain_ba24 |
RS1600905 | 3 | 45603811 | lars2 | ENSG00000011376.5 | 1.166E-7 | 0 | 173813 | gtex_brain_ba24 |
RS1600906 | 3 | 45603944 | lars2 | ENSG00000011376.5 | 1.166E-7 | 0 | 173946 | gtex_brain_ba24 |
rs13075111 | 3 | 45604131 | lars2 | ENSG00000011376.5 | 1.166E-7 | 0 | 174133 | gtex_brain_ba24 |
rs13075121 | 3 | 45604159 | lars2 | ENSG00000011376.5 | 1.166E-7 | 0 | 174161 | gtex_brain_ba24 |
rs10452026 | 3 | 45604340 | lars2 | ENSG00000011376.5 | 3.061E-7 | 0 | 174342 | gtex_brain_ba24 |
rs10452027 | 3 | 45604503 | lars2 | ENSG00000011376.5 | 4.927E-8 | 0 | 174505 | gtex_brain_ba24 |
rs2083242 | 3 | 45604690 | lars2 | ENSG00000011376.5 | 1.166E-7 | 0 | 174692 | gtex_brain_ba24 |
rs386355892 | 3 | 45606724 | lars2 | ENSG00000011376.5 | 1.699E-7 | 0 | 176726 | gtex_brain_ba24 |
rs736483 | 3 | 45608701 | lars2 | ENSG00000011376.5 | 5.561E-7 | 0 | 178703 | gtex_brain_ba24 |
rs76816 | 3 | 45608708 | lars2 | ENSG00000011376.5 | 1.995E-6 | 0 | 178710 | gtex_brain_ba24 |
rs2003879 | 3 | 45609075 | lars2 | ENSG00000011376.5 | 6.084E-8 | 0 | 179077 | gtex_brain_ba24 |
rs13066873 | 3 | 45617040 | lars2 | ENSG00000011376.5 | 2.607E-6 | 0 | 187042 | gtex_brain_ba24 |
RS35848059 | 3 | 45618695 | lars2 | ENSG00000011376.5 | 2.099E-6 | 0 | 188697 | gtex_brain_ba24 |
rs147680951 | 3 | 45619107 | lars2 | ENSG00000011376.5 | 1.663E-6 | 0 | 189109 | gtex_brain_ba24 |
RS4377517 | 3 | 45641806 | lars2 | ENSG00000011376.5 | 7.466E-7 | 0 | 211808 | gtex_brain_ba24 |
RS13059518 | 3 | 45643442 | lars2 | ENSG00000011376.5 | 2.571E-7 | 0 | 213444 | gtex_brain_ba24 |
rs34877991 | 3 | 45643648 | lars2 | ENSG00000011376.5 | 1.385E-6 | 0 | 213650 | gtex_brain_ba24 |
rs2254828 | 3 | 45646879 | lars2 | ENSG00000011376.5 | 1.057E-6 | 0 | 216881 | gtex_brain_ba24 |
RS4458403 | 3 | 45648766 | lars2 | ENSG00000011376.5 | 5.564e-8 | 0 | 218768 | gtex_brain_ba24 |
RS17261269 | 3 | 45651895 | lars2 | ENSG00000011376.5 | 6.523E-8 | 0 | 221897 | gtex_brain_ba24 |
RS1110650 | 3 | 45653384 | lars2 | ENSG00000011376.5 | 8.044e-8 | 0 | 223386 | gtex_brain_ba24 |
RS66748093 | 3 | 45654358 | lars2 | ENSG00000011376.5 | 5.564e-8 | 0 | 224360 | gtex_brain_ba24 |
rs13089744 | 3 | 45656279 | lars2 | ENSG00000011376.5 | 6.516E-8 | 0 | 226281 | gtex_brain_ba24 |
RS13094153 | 3 | 45656562 | lars2 | ENSG00000011376.5 | 6.523E-8 | 0 | 226564 | gtex_brain_ba24 |
RS6808958 | 3 | 45662116 | lars2 | ENSG00000011376.5 | 5.564e-8 | 0 | 232118 | gtex_brain_ba24 |
RS4682791 | 3 | 45665194 | lars2 | ENSG00000011376.5 | 5.564e-8 | 0 | 235196 | gtex_brain_ba24 |
RS4401397 | 3 | 45671401 | lars2 | ENSG00000011376.5 | 3.603E-7 | 0 | 241403 | gtex_brain_ba24 |
rs2012762 | 3 | 45672871 | lars2 | ENSG00000011376.5 | 3.603E-7 | 0 | 242873 | gtex_brain_ba24 |
RS75040931 | 3 | 45422763 | lars2 | ENSG00000011376.5 | 2.486E-6 | 0 | -7235 | gtex_brain_putamen_basal |
RS35104704 | 3 | 45472788 | lars2 | ENSG00000011376.5 | 9.298E-8 | 0 | 42790 | gtex_brain_putamen_basal |
RS34877269 | 3 | 45475070 | lars2 | ENSG00000011376.5 | 1.741E-7 | 0 | 45072 | gtex_brain_putamen_basal |
RS2014378 | 3 | 45476486 | lars2 | ENSG00000011376.5 | 1.681E-7 | 0 | 46488 | gtex_brain_putamen_basal |
RS1108181 | 3 | 45477510 | lars2 | ENSG00000011376.5 | 1.681E-7 | 0 | 47512 | gtex_brain_putamen_basal |
RS1108180 | 3 | 45477777 | lars2 | ENSG00000011376.5 | 1.681E-7 | 0 | 47779 | gtex_brain_putamen_basal |
RS11929664 | 3 | 45479841 | lars2 | ENSG00000011376.5 | 1.681E-7 | 0 | 49843 | gtex_brain_putamen_basal |
RS77454942 | 3 | 45481108 | lars2 | ENSG00000011376.5 | 1.594E-7 | 0 | 51110 | gtex_brain_putamen_basal |
rs200438456 | 3 | 45482066 | lars2 | ENSG00000011376.5 | 4.032E-7 | 0 | 52068 | gtex_brain_putamen_basal |
rs397824037 | 3 | 45482445 | lars2 | ENSG00000011376.5 | 1.493E-7 | 0 | 52447 | gtex_brain_putamen_basal |
RS9311369 | 3 | 45482541 | lars2 | ENSG00000011376.5 | 8.757E-8 | 0 | 52543 | gtex_brain_putamen_basal |
rs11926964 | 3 | 45489449 | lars2 | ENSG00000011376.5 | 8.741E-8 | 0 | 59451 | gtex_brain_putamen_basal |
rs11929342 | 3 | 45492119 | lars2 | ENSG00000011376.5 | 1.447E-7 | 0 | 62121 | gtex_brain_putamen_basal |
RS11130063 | 3 | 45493862 | lars2 | ENSG00000011376.5 | 5.088E-8 | 0 | 63864 | gtex_brain_putamen_basal |
RS2138209 | 3 | 45493941 | lars2 | ENSG00000011376.5 | 4.374E-11 | 0 | 63943 | gtex_brain_putamen_basal |
rs1399703 | 3 | 45495358 | lars2 | ENSG00000011376.5 | 7.938E-12 | 0 | 65360 | gtex_brain_putamen_basal |
RS375827681 | 3 | 45495927 | lars2 | ENSG00000011376.5 | 3.56e-9 | 0 | 65929 | gtex_brain_putamen_basal |
RS1877960 | 3 | 45496144 | lars2 | ENSG00000011376.5 | 2.527E-9 | 0 | 66146 | gtex_brain_putamen_basal |
RS965238 | 3 | 45497671 | lars2 | ENSG00000011376.5 | 8.15e-7 | 0 | 67673 | gtex_brain_putamen_basal |
RS1812600 | 3 | 45497947 | lars2 | ENSG00000011376.5 | 5.611E-8 | 0 | 67949 | gtex_brain_putamen_basal |
RS6768340 | 3 | 45498342 | lars2 | ENSG00000011376.5 | 7.938E-12 | 0 | 68344 | gtex_brain_putamen_basal |
rs6771080 | 3 | 45498726 | lars2 | ENSG00000011376.5 | 5.443e-8 | 0 | 68728 | gtex_brain_putamen_basal |
RS1949304 | 3 | 45500950 | lars2 | ENSG00000011376.5 | 5.443e-8 | 0 | 70952 | gtex_brain_putamen_basal |
RS1949303 | 3 | 45501088 | lars2 | ENSG00000011376.5 | 2.501E-9 | 0 | 71090 | gtex_brain_putamen_basal |
rs900326 | 3 | 45503893 | lars2 | ENSG00000011376.5 | 5.376E-8 | 0 | 73895 | gtex_brain_putamen_basal |
rs3774692 | 3 | 45507305 | lars2 | ENSG00000011376.5 | 4.113e-12 | 0 | 77307 | gtex_brain_putamen_basal |
rs4683116 | 3 | 45508718 | lars2 | ENSG00000011376.5 | 4.969E-8 | 0 | 78720 | gtex_brain_putamen_basal |
RS11921901 | 3 | 45509736 | lars2 | ENSG00000011376.5 | 4.987E-8 | 0 | 79738 | gtex_brain_putamen_basal |
rs3774690 | 3 | 45511026 | lars2 | ENSG00000011376.5 | 3.442E-13 | 0 | 81028 | gtex_brain_putamen_basal |
rs3796364 | 3 | 45511266 | lars2 | ENSG00000011376.5 | 2.482E-10 | 0 | 81268 | gtex_brain_putamen_basal |
RS11919039 | 3 | 45515648 | lars2 | ENSG00000011376.5 | 7.615E-9 | 0 | 85650 | gtex_brain_putamen_basal |
rs12487705 | 3 | 45517759 | lars2 | ENSG00000011376.5 | 7.471E-9 | 0 | 87761 | gtex_brain_putamen_basal |
rs12639021 | 3 | 45526812 | lars2 | ENSG00000011376.5 | 3.031E-13 | 0 | 96814 | gtex_brain_putamen_basal |
rs13088061 | 3 | 45528423 | lars2 | ENSG00000011376.5 | 3.057E-13 | 0 | 98425 | gtex_brain_putamen_basal |
RS11130066 | 3 | 45528997 | lars2 | ENSG00000011376.5 | 7.328e-9 | 0 | 98999 | gtex_brain_putamen_basal |
RS1817489 | 3 | 45529692 | lars2 | ENSG00000011376.5 | 7.31E-9 | 0 | 99694 | gtex_brain_putamen_basal |
RS1825212 | 3 | 45529896 | lars2 | ENSG00000011376.5 | 7.327E-9 | 0 | 99898 | gtex_brain_putamen_basal |
RS3733116 | 3 | 45530401 | lars2 | ENSG00000011376.5 | 7.293E-9 | 0 | 100403 | gtex_brain_putamen_basal |
RS13070575 | 3 | 45534973 | lars2 | ENSG00000011376.5 | 3.015e-13 | 0 | 104975 | gtex_brain_putamen_basal |
RS3774684 | 3 | 45535941 | lars2 | ENSG00000011376.5 | 7.162E-9 | 0 | 105943 | gtex_brain_putamen_basal |
rs12638088 | 3 | 45537973 | lars2 | ENSG00000011376.5 | 3.01e-13 | 0 | 107975 | gtex_brain_putamen_basal |
RS11721185 | 3 | 45539685 | lars2 | ENSG00000011376.5 | 7.264e-9 | 0 | 109687 | gtex_brain_putamen_basal |
rs2306522 | 3 | 45542083 | lars2 | ENSG00000011376.5 | 7.266E-9 | 0 | 112085 | gtex_brain_putamen_basal |
rs12629394 | 3 | 45545451 | lars2 | ENSG00000011376.5 | 3.242e-13 | 0 | 115453 | gtex_brain_putamen_basal |
rs35269084 | 3 | 45546577 | lars2 | ENSG00000011376.5 | 2.996E-13 | 0 | 116579 | gtex_brain_putamen_basal |
RS2170546 | 3 | 45549298 | lars2 | ENSG00000011376.5 | 3.242e-13 | 0 | 119300 | gtex_brain_putamen_basal |
rs900324 | 3 | 45549807 | lars2 | ENSG00000011376.5 | 3.001E-13 | 0 | 119809 | gtex_brain_putamen_basal |
rs1110778 | 3 | 45550661 | lars2 | ENSG00000011376.5 | 2.969e-12 | 0 | 120663 | gtex_brain_putamen_basal |
rs12633889 | 3 | 45551898 | lars2 | ENSG00000011376.5 | 3.019E-13 | 0 | 121900 | gtex_brain_putamen_basal |
RS2291237 | 3 | 45555044 | lars2 | ENSG00000011376.5 | 7.705E-9 | 0 | 125046 | gtex_brain_putamen_basal |
RS34058819 | 3 | 45555700 | lars2 | ENSG00000011376.5 | 3.366e-13 | 0 | 125702 | gtex_brain_putamen_basal |
rs17077951 | 3 | 45555765 | lars2 | ENSG00000011376.5 | 3.366e-13 | 0 | 125767 | gtex_brain_putamen_basal |
RS10510746 | 3 | 45557003 | lars2 | ENSG00000011376.5 | 8.409E-9 | 0 | 127005 | gtex_brain_putamen_basal |
RS11549809 | 3 | 45557707 | lars2 | ENSG00000011376.5 | 3.688e-13 | 0 | 127709 | gtex_brain_putamen_basal |
rs2276860 | 3 | 45559621 | lars2 | ENSG00000011376.5 | 6.053E-13 | 0 | 129623 | gtex_brain_putamen_basal |
rs12630693 | 3 | 45560113 | lars2 | ENSG00000011376.5 | 3.692E-13 | 0 | 130115 | gtex_brain_putamen_basal |
rs113936742 | 3 | 45561149 | lars2 | ENSG00000011376.5 | 7.302e-13 | 0 | 131151 | gtex_brain_putamen_basal |
rs6441920 | 3 | 45561203 | lars2 | ENSG00000011376.5 | 3.7E-13 | 0 | 131205 | gtex_brain_putamen_basal |
rs267224 | 3 | 45561487 | lars2 | ENSG00000011376.5 | 8.844E-9 | 0 | 131489 | gtex_brain_putamen_basal |
rs35676252 | 3 | 45563862 | lars2 | ENSG00000011376.5 | 1.719E-8 | 0 | 133864 | gtex_brain_putamen_basal |
rs267222 | 3 | 45564003 | lars2 | ENSG00000011376.5 | 8.844E-9 | 0 | 134005 | gtex_brain_putamen_basal |
rs12630334 | 3 | 45564439 | lars2 | ENSG00000011376.5 | 3.736e-13 | 0 | 134441 | gtex_brain_putamen_basal |
rs7626059 | 3 | 45564879 | lars2 | ENSG00000011376.5 | 9.194E-9 | 0 | 134881 | gtex_brain_putamen_basal |
RS2624668 | 3 | 45567557 | lars2 | ENSG00000011376.5 | 8.844E-9 | 0 | 137559 | gtex_brain_putamen_basal |
rs13099924 | 3 | 45569582 | lars2 | ENSG00000011376.5 | 6.765E-13 | 0 | 139584 | gtex_brain_putamen_basal |
rs35131533 | 3 | 45570065 | lars2 | ENSG00000011376.5 | 6.794E-13 | 0 | 140067 | gtex_brain_putamen_basal |
rs2578672 | 3 | 45572977 | lars2 | ENSG00000011376.5 | 9.104E-9 | 0 | 142979 | gtex_brain_putamen_basal |
RS2624665 | 3 | 45572979 | lars2 | ENSG00000011376.5 | 9.104E-9 | 0 | 142981 | gtex_brain_putamen_basal |
rs2578670 | 3 | 45573466 | lars2 | ENSG00000011376.5 | 8.703E-9 | 0 | 143468 | gtex_brain_putamen_basal |
rs2578669 | 3 | 45573541 | lars2 | ENSG00000011376.5 | 8.693E-9 | 0 | 143543 | gtex_brain_putamen_basal |
rs61286189 | 3 | 45579533 | lars2 | ENSG00000011376.5 | 3.5e-11 | 0 | 149535 | gtex_brain_putamen_basal |
rs34622472 | 3 | 45579699 | lars2 | ENSG00000011376.5 | 3.563e-11 | 0 | 149701 | gtex_brain_putamen_basal |
rs17077990 | 3 | 45581959 | lars2 | ENSG00000011376.5 | 4.682e-11 | 0 | 151961 | gtex_brain_putamen_basal |
RS34191038 | 3 | 45583297 | lars2 | ENSG00000011376.5 | 1.245e-9 | 0 | 153299 | gtex_brain_putamen_basal |
rs267256 | 3 | 45587111 | lars2 | ENSG00000011376.5 | 6.743E-8 | 0 | 157113 | gtex_brain_putamen_basal |
RS3821895 | 3 | 45587983 | lars2 | ENSG00000011376.5 | 1.897E-11 | 0 | 157985 | gtex_brain_putamen_basal |
rs267270 | 3 | 45593237 | lars2 | ENSG00000011376.5 | 2.159E-8 | 0 | 163239 | gtex_brain_putamen_basal |
rs267271 | 3 | 45593969 | lars2 | ENSG00000011376.5 | 2.147E-8 | 0 | 163971 | gtex_brain_putamen_basal |
rs267273 | 3 | 45594983 | lars2 | ENSG00000011376.5 | 4.571E-8 | 0 | 164985 | gtex_brain_putamen_basal |
rs267274 | 3 | 45595006 | lars2 | ENSG00000011376.5 | 4.571E-8 | 0 | 165008 | gtex_brain_putamen_basal |
rs267275 | 3 | 45595459 | lars2 | ENSG00000011376.5 | 3.43e-9 | 0 | 165461 | gtex_brain_putamen_basal |
rs267277 | 3 | 45597610 | lars2 | ENSG00000011376.5 | 3.531E-7 | 0 | 167612 | gtex_brain_putamen_basal |
rs267278 | 3 | 45598099 | lars2 | ENSG00000011376.5 | 1.606E-7 | 0 | 168101 | gtex_brain_putamen_basal |
rs267279 | 3 | 45598475 | lars2 | ENSG00000011376.5 | 2.69E-6 | 0 | 168477 | gtex_brain_putamen_basal |
rs267280 | 3 | 45598744 | lars2 | ENSG00000011376.5 | 1.959E-7 | 0 | 168746 | gtex_brain_putamen_basal |
rs267282 | 3 | 45598919 | lars2 | ENSG00000011376.5 | 1.959E-7 | 0 | 168921 | gtex_brain_putamen_basal |
rs4575933 | 3 | 45599419 | lars2 | ENSG00000011376.5 | 1.959E-7 | 0 | 169421 | gtex_brain_putamen_basal |
rs267283 | 3 | 45599906 | lars2 | ENSG00000011376.5 | 1.959E-7 | 0 | 169908 | gtex_brain_putamen_basal |
rs174818 | 3 | 45600530 | lars2 | ENSG00000011376.5 | 2.039E-7 | 0 | 170532 | gtex_brain_putamen_basal |
rs267257 | 3 | 45600868 | lars2 | ENSG00000011376.5 | 2.138E-6 | 0 | 170870 | gtex_brain_putamen_basal |
rs267259 | 3 | 45601218 | lars2 | ENSG00000011376.5 | 2.036E-11 | 0 | 171220 | gtex_brain_putamen_basal |
rs267260 | 3 | 45601252 | lars2 | ENSG00000011376.5 | 2.036E-11 | 0 | 171254 | gtex_brain_putamen_basal |
rs267261 | 3 | 45601597 | lars2 | ENSG00000011376.5 | 2.04e-11 | 0 | 171599 | gtex_brain_putamen_basal |
rs13083568 | 3 | 45602225 | lars2 | ENSG00000011376.5 | 1.524e-12 | 0 | 172227 | gtex_brain_putamen_basal |
rs35345735 | 3 | 45602836 | lars2 | ENSG00000011376.5 | 8.001e-10 | 0 | 172838 | gtex_brain_putamen_basal |
RS71617895 | 3 | 45603310 | lars2 | ENSG00000011376.5 | 1.027E-9 | 0 | 173312 | gtex_brain_putamen_basal |
RS1600905 | 3 | 45603811 | lars2 | ENSG00000011376.5 | 1.331E-9 | 0 | 173813 | gtex_brain_putamen_basal |
RS1600906 | 3 | 45603944 | lars2 | ENSG00000011376.5 | 1.331E-9 | 0 | 173946 | gtex_brain_putamen_basal |
rs13075111 | 3 | 45604131 | lars2 | ENSG00000011376.5 | 1.331E-9 | 0 | 174133 | gtex_brain_putamen_basal |
rs13075121 | 3 | 45604159 | lars2 | ENSG00000011376.5 | 1.331E-9 | 0 | 174161 | gtex_brain_putamen_basal |
rs10452026 | 3 | 45604340 | lars2 | ENSG00000011376.5 | 1.327E-9 | 0 | 174342 | gtex_brain_putamen_basal |
rs10452027 | 3 | 45604503 | lars2 | ENSG00000011376.5 | 5.125E-9 | 0 | 174505 | gtex_brain_putamen_basal |
rs2083242 | 3 | 45604690 | lars2 | ENSG00000011376.5 | 1.331E-9 | 0 | 174692 | gtex_brain_putamen_basal |
rs2083241 | 3 | 45604834 | lars2 | ENSG00000011376.5 | 2.258E-6 | 0 | 174836 | gtex_brain_putamen_basal |
RS6791380 | 3 | 45605786 | lars2 | ENSG00000011376.5 | 1.336E-6 | 0 | 175788 | gtex_brain_putamen_basal |
rs386355892 | 3 | 45606724 | lars2 | ENSG00000011376.5 | 1.469E-9 | 0 | 176726 | gtex_brain_putamen_basal |
rs736483 | 3 | 45608701 | lars2 | ENSG00000011376.5 | 2.093E-8 | 0 | 178703 | gtex_brain_putamen_basal |
rs76816 | 3 | 45608708 | lars2 | ENSG00000011376.5 | 1.404E-6 | 0 | 178710 | gtex_brain_putamen_basal |
rs2003879 | 3 | 45609075 | lars2 | ENSG00000011376.5 | 1.086E-8 | 0 | 179077 | gtex_brain_putamen_basal |
RS9844307 | 3 | 45609868 | lars2 | ENSG00000011376.5 | 2.871E-8 | 0 | 179870 | gtex_brain_putamen_basal |
rs4683123 | 3 | 45610284 | lars2 | ENSG00000011376.5 | 1.311E-6 | 0 | 180286 | gtex_brain_putamen_basal |
RS35203209 | 3 | 45610344 | lars2 | ENSG00000011376.5 | 2.89E-8 | 0 | 180346 | gtex_brain_putamen_basal |
rs6781081 | 3 | 45614060 | lars2 | ENSG00000011376.5 | 4.98E-7 | 0 | 184062 | gtex_brain_putamen_basal |
RS34378743 | 3 | 45616845 | lars2 | ENSG00000011376.5 | 1.132E-7 | 0 | 186847 | gtex_brain_putamen_basal |
RS56206232 | 3 | 45616898 | lars2 | ENSG00000011376.5 | 1.132E-7 | 0 | 186900 | gtex_brain_putamen_basal |
rs13066873 | 3 | 45617040 | lars2 | ENSG00000011376.5 | 1.363E-8 | 0 | 187042 | gtex_brain_putamen_basal |
RS35848059 | 3 | 45618695 | lars2 | ENSG00000011376.5 | 5.079E-10 | 0 | 188697 | gtex_brain_putamen_basal |
rs147680951 | 3 | 45619107 | lars2 | ENSG00000011376.5 | 4.832E-10 | 0 | 189109 | gtex_brain_putamen_basal |
RS13084796 | 3 | 45619988 | lars2 | ENSG00000011376.5 | 2.327E-6 | 0 | 189990 | gtex_brain_putamen_basal |
rs267243 | 3 | 45622893 | lars2 | ENSG00000011376.5 | 2.777E-6 | 0 | 192895 | gtex_brain_putamen_basal |
RS1021124 | 3 | 45623774 | lars2 | ENSG00000011376.5 | 1.449E-6 | 0 | 193776 | gtex_brain_putamen_basal |
rs267215 | 3 | 45632074 | lars2 | ENSG00000011376.5 | 6.17E-7 | 0 | 202076 | gtex_brain_putamen_basal |
rs267216 | 3 | 45632221 | lars2 | ENSG00000011376.5 | 6.17E-7 | 0 | 202223 | gtex_brain_putamen_basal |
RS13083425 | 3 | 45632288 | lars2 | ENSG00000011376.5 | 3.629E-9 | 0 | 202290 | gtex_brain_putamen_basal |
rs267217 | 3 | 45632317 | lars2 | ENSG00000011376.5 | 6.17E-7 | 0 | 202319 | gtex_brain_putamen_basal |
rs71095042 | 3 | 45632950 | lars2 | ENSG00000011376.5 | 1.723E-8 | 0 | 202952 | gtex_brain_putamen_basal |
rs267218 | 3 | 45633834 | lars2 | ENSG00000011376.5 | 2.016E-6 | 0 | 203836 | gtex_brain_putamen_basal |
RS13074123 | 3 | 45635413 | lars2 | ENSG00000011376.5 | 9.581E-9 | 0 | 205415 | gtex_brain_putamen_basal |
rs267238 | 3 | 45636335 | lars2 | ENSG00000011376.5 | 2.943E-6 | 0 | 206337 | gtex_brain_putamen_basal |
rs267237 | 3 | 45637253 | lars2 | ENSG00000011376.5 | 4.446E-6 | 0 | 207255 | gtex_brain_putamen_basal |
rs267236 | 3 | 45637439 | lars2 | ENSG00000011376.5 | 1.882E-6 | 0 | 207441 | gtex_brain_putamen_basal |
rs13086458 | 3 | 45637830 | lars2 | ENSG00000011376.5 | 1.132E-7 | 0 | 207832 | gtex_brain_putamen_basal |
RS4377517 | 3 | 45641806 | lars2 | ENSG00000011376.5 | 4.646E-7 | 0 | 211808 | gtex_brain_putamen_basal |
rs200750505 | 3 | 45643441 | lars2 | ENSG00000011376.5 | 3.649E-6 | 0 | 213443 | gtex_brain_putamen_basal |
RS13059518 | 3 | 45643442 | lars2 | ENSG00000011376.5 | 9.06e-7 | 0 | 213444 | gtex_brain_putamen_basal |
rs2254828 | 3 | 45646879 | lars2 | ENSG00000011376.5 | 1.26E-6 | 0 | 216881 | gtex_brain_putamen_basal |
RS4458403 | 3 | 45648766 | lars2 | ENSG00000011376.5 | 1.157E-7 | 0 | 218768 | gtex_brain_putamen_basal |
RS17261269 | 3 | 45651895 | lars2 | ENSG00000011376.5 | 4.146E-6 | 0 | 221897 | gtex_brain_putamen_basal |
RS1110650 | 3 | 45653384 | lars2 | ENSG00000011376.5 | 3.997E-7 | 0 | 223386 | gtex_brain_putamen_basal |
RS66748093 | 3 | 45654358 | lars2 | ENSG00000011376.5 | 4.469E-7 | 0 | 224360 | gtex_brain_putamen_basal |
rs13089744 | 3 | 45656279 | lars2 | ENSG00000011376.5 | 4.17E-6 | 0 | 226281 | gtex_brain_putamen_basal |
RS13094153 | 3 | 45656562 | lars2 | ENSG00000011376.5 | 4.146E-6 | 0 | 226564 | gtex_brain_putamen_basal |
RS6808958 | 3 | 45662116 | lars2 | ENSG00000011376.5 | 1.157E-7 | 0 | 232118 | gtex_brain_putamen_basal |
RS4682791 | 3 | 45665194 | lars2 | ENSG00000011376.5 | 1.157E-7 | 0 | 235196 | gtex_brain_putamen_basal |
RS4401397 | 3 | 45671401 | lars2 | ENSG00000011376.5 | 1.821E-6 | 0 | 241403 | gtex_brain_putamen_basal |
rs2012762 | 3 | 45672871 | lars2 | ENSG00000011376.5 | 3.449E-7 | 0 | 242873 | gtex_brain_putamen_basal |
RS9311375 | 3 | 45675051 | lars2 | ENSG00000011376.5 | 1.072E-6 | 0 | 245053 | gtex_brain_putamen_basal |
RS4682794 | 3 | 45680259 | lars2 | ENSG00000011376.5 | 2.436E-6 | 0 | 250261 | gtex_brain_putamen_basal |
rs4234450 | 3 | 45682214 | lars2 | ENSG00000011376.5 | 1.794E-6 | 0 | 252216 | gtex_brain_putamen_basal |
rs4234451 | 3 | 45682406 | lars2 | ENSG00000011376.5 | 1.812E-6 | 0 | 252408 | gtex_brain_putamen_basal |
RS6765732 | 3 | 45685386 | lars2 | ENSG00000011376.5 | 2.868e-6 | 0 | 255388 | gtex_brain_putamen_basal |
RS4377516 | 3 | 45685515 | lars2 | ENSG00000011376.5 | 2.859E-6 | 0 | 255517 | gtex_brain_putamen_basal |
rs4362757 | 3 | 45687573 | lars2 | ENSG00000011376.5 | 2.558E-6 | 0 | 257575 | gtex_brain_putamen_basal |
RS9846544 | 3 | 45692901 | lars2 | ENSG00000011376.5 | 1.712E-6 | 0 | 262903 | gtex_brain_putamen_basal |
RS147911200 | 3 | 45703767 | lars2 | ENSG00000011376.5 | 1.775E-6 | 0 | 273769 | gtex_brain_putamen_basal |
rs2578665 | 3 | 45703797 | lars2 | ENSG00000011376.5 | 1.543E-6 | 0 | 273799 | gtex_brain_putamen_basal |
rs2118750 | 3 | 45710987 | lars2 | ENSG00000011376.5 | 1.958E-6 | 0 | 280989 | gtex_brain_putamen_basal |
RS2247771 | 3 | 45719209 | lars2 | ENSG00000011376.5 | 1.222E-6 | 0 | 289211 | gtex_brain_putamen_basal |
rs1883094 | 3 | 45730436 | lars2 | ENSG00000011376.5 | 2.837E-6 | 0 | 300438 | gtex_brain_putamen_basal |
RS7652042 | 3 | 45801726 | lars2 | ENSG00000011376.5 | 2.698E-6 | 0 | 371728 | gtex_brain_putamen_basal |
第二节。转录组注释
一般基因表达(GTEX)
![无法使用](http://www.tjghsg.com/bioinfo/SZGR/GeneImg/LARS2_DE_GTEx.png)
Gene expression during devlopment (BrainCloud)
脚注:
总共绘制了269个时间点,n = 38个胎儿样品(x = 1:38)。每个三角形代表一个时间点。
Gene expression of temporal and spatial changes (BrainSpan)
脚注:
SC:亚皮质区域;SM:感觉运动区域;FC:额叶皮层;和TP:颞顶皮层
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
大脑区域没有共表达基因
第三节。基因本体论注释
分子功能 | 去学期 | 证据 | 神经关键字 | PubMed ID |
---|---|---|---|---|
GO:0000166 | 核苷酸结合 | IEA | - | |
去:0005524 | ATP结合 | IEA | - | |
去:0004823 | 亮氨酸-TRNA连接酶活性 | IEA | - | |
GO:0016874 | 连接酶活性 | IEA | - | |
生物过程 | 去学期 | 证据 | 神经关键字 | PubMed ID |
去:0006429 | leucyl-tRNA aminoacylation | IEA | - | |
Cellular component | 去学期 | 证据 | 神经关键字 | PubMed ID |
去:0005737 | 细胞质 | IEA | - | |
去:0005739 | mitochondrion | IEA | - | |
去:0005759 | 线粒体基质 | IEA | - |