Gene Page:GK3P
Summary?
| GeneID | 2713 |
| Symbol | GK3P |
| Synonyms | GKP3|GKTB |
| Description | glycerol kinase 3 pseudogene |
| Reference | MIM:600149|HGNC:HGNC:4292| |
| Gene type | pseudo |
| Map location | 4q32.1 |
| Pascal p-value | 0.003 |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
死神:胎儿(13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| SLC25A40 | 0.82 | 0.79 |
| SACM1L | 0.81 | 0.78 |
| SLC3A1 | 0.80 | 0.76 |
| SPTLC1 | 0.80 | 0.77 |
| SBDS | 0.80 | 0.76 |
| C14orf100 | 0.80 | 0.76 |
| SENP2 | 0.80 | 0.77 |
| C2orf30 | 0.80 | 0.77 |
| USP8 | 0.79 | 0.75 |
| COQ10B | 0.79 | 0.77 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| AF347015.21 | -0.43 | -0.22 |
| FAM159B | -0.40 | -0.41 |
| AF347015.18 | -0.40 | -0.23 |
| RP9P | -0.40 | -0.38 |
| AC135724.1 | -0.39 | -0.39 |
| IL32 | -0.39 | -0.27 |
| AC010300.1 | -0.37 | -0.28 |
| AL022328.1 | -0.37 | -0.31 |
| AC098691.2 | -0.36 | -0.23 |
| AC100783.1 | -0.36 | -0.27 |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| MULLIGHAN NPM1 MUTATED SIGNATURE 1 UP | 276 | 165 | All SZGR 2.0 genes in this pathway |
| MANALO HYPOXIA DN | 289 | 166 | All SZGR 2.0 genes in this pathway |
| STOSSI RESPONSE TO ESTRADIOL | 50 | 35 | All SZGR 2.0 genes in this pathway |
| CREIGHTON ENDOCRINE THERAPY RESISTANCE 3 | 720 | 440 | All SZGR 2.0 genes in this pathway |
| STEIN ESRRA TARGETS UP | 388 | 234 | All SZGR 2.0 genes in this pathway |
| STEIN ESRRA TARGETS | 535 | 325 | All SZGR 2.0 genes in this pathway |
| MOOTHA GLUCONEOGENESIS | 32 | 23 | All SZGR 2.0 genes in this pathway |