基因页：C11orf54
Summary？
| 基因 | 28970 |
| 象征 | C11orf54 |
| Synonyms | PTD012 | PTOD012 |
| Description | 染色体11开放阅读框54 |
| Reference | MIM：615810|HGNC:HGNC:30204|ENSEMBL：ENSG00000182919|HPRD：17923|Vega：Otthumg00000167452 |
| 基因类型 | 蛋白质编码 |
| 地图位置 | 11q21 |
| Pascal P值 | 0.146 |
| Sherlock p-value | 0.772 |
| 胎儿β | 0.699 |
| DMG | 1(# studies) |
| 主持人 | 尾状基底神经节 皮质 Frontal Cortex BA9 海马 Hypothalamus 伏隔核基底神经节 Putamen basal ganglia Myers' cis & trans |
Gene in Data Sources
| 基因集名称 | 基因组方法 | Description | 信息 |
|---|---|---|---|
| 简历：PGCNP | 全基因组协会研究 | GWAS | |
| DMG：Nishioka_2013 | 全基因组DNA甲基化分析 | 作者研究了来自18例第一期精神分裂症（FESZ）和15个正常对照的18例外周血细胞中DNA的甲基化谱。 | 1 |
Section I. Genetics and epigenetics annotation
差异甲基化基因
差异甲基化基因| 探测 | 染色体 | 位置 | 最近的基因 | p（dis） | Beta (dis) | fdr（dis） | 学习 |
|---|---|---|---|---|---|---|---|
| CG01618304 | 11 | 93474888 | C11orf54 | -0.02 | 0.57 | DMG：Nishioka_2013 |
EQTL注释
| SNP ID | 染色体 | 位置 | 主持人 | Gene Entrez ID | PVALUE | QVALUE | TSS距离 | EQTL类型 |
|---|---|---|---|---|---|---|---|---|
| RS6674970 | CHR1 | 151116278 | C11orf54 | 28970 | 0.07 | 反式 | ||
| RS1701843 | CHR7 | 113008822 | C11orf54 | 28970 | 0.01 | 反式 | ||
| RS7943266 | 11 | 93476627 | C11orf54 | ENSG00000182919.10 | 1.68e-9 | 0 | 1498 | gtex_brain_putamen_basal |
| RS652961 | 11 | 93476766 | C11orf54 | ENSG00000182919.10 | 1.869E-10 | 0 | 1637 | gtex_brain_putamen_basal |
| RS7943525 | 11 | 93476860 | C11orf54 | ENSG00000182919.10 | 9.885e-10 | 0 | 1731年 | gtex_brain_putamen_basal |
| RS10741476 | 11 | 93477621 | C11orf54 | ENSG00000182919.10 | 1.632E-9 | 0 | 2492 | gtex_brain_putamen_basal |
| RS11020505 | 11 | 93478133 | C11orf54 | ENSG00000182919.10 | 1.626E-9 | 0 | 3004 | gtex_brain_putamen_basal |
| RS11020506 | 11 | 93478342 | C11orf54 | ENSG00000182919.10 | 1.624E-9 | 0 | 3213 | gtex_brain_putamen_basal |
| RS11020507 | 11 | 93478528 | C11orf54 | ENSG00000182919.10 | 1.624E-9 | 0 | 3399 | gtex_brain_putamen_basal |
| RS595650 | 11 | 93480190 | C11orf54 | ENSG00000182919.10 | 1.627E-9 | 0 | 5061 | gtex_brain_putamen_basal |
| RS624856 | 11 | 93480708 | C11orf54 | ENSG00000182919.10 | 1.491E-9 | 0 | 5579 | gtex_brain_putamen_basal |
| RS665507 | 11 | 93481155 | C11orf54 | ENSG00000182919.10 | 1.626E-9 | 0 | 6026 | gtex_brain_putamen_basal |
| RS640379 | 11 | 93481908 | C11orf54 | ENSG00000182919.10 | 1.515E-9 | 0 | 6779 | gtex_brain_putamen_basal |
| RS1284141 | 11 | 93482094 | C11orf54 | ENSG00000182919.10 | 9.889E-10 | 0 | 6965 | gtex_brain_putamen_basal |
| RS11020510 | 11 | 93482403 | C11orf54 | ENSG00000182919.10 | 1.854e-10 | 0 | 7274 | gtex_brain_putamen_basal |
| RS681321 | 11 | 93483346 | C11orf54 | ENSG00000182919.10 | 5.179e-11 | 0 | 8217 | gtex_brain_putamen_basal |
| RS1783938 | 11 | 93486384 | C11orf54 | ENSG00000182919.10 | 1.624E-9 | 0 | 11255 | gtex_brain_putamen_basal |
| RS397828224 | 11 | 93486526 | C11orf54 | ENSG00000182919.10 | 1.38e-8 | 0 | 11397 | gtex_brain_putamen_basal |
| RS606462 | 11 | 93487418 | C11orf54 | ENSG00000182919.10 | 1.681E-9 | 0 | 12289 | gtex_brain_putamen_basal |
| RS621355 | 11 | 93487595 | C11orf54 | ENSG00000182919.10 | 1.684E-9 | 0 | 12466 | gtex_brain_putamen_basal |
| RS6483265 | 11 | 93488092 | C11orf54 | ENSG00000182919.10 | 4.55E-8 | 0 | 12963 | gtex_brain_putamen_basal |
| RS2510603 | 11 | 93488192 | C11orf54 | ENSG00000182919.10 | 1.022E-6 | 0 | 13063 | gtex_brain_putamen_basal |
| RS2434978 | 11 | 93488199 | C11orf54 | ENSG00000182919.10 | 6.97E-8 | 0 | 13070 | gtex_brain_putamen_basal |
| RS7950574 | 11 | 93489203 | C11orf54 | ENSG00000182919.10 | 8.09E-9 | 0 | 14074 | gtex_brain_putamen_basal |
| rs602242 | 11 | 93490219 | C11orf54 | ENSG00000182919.10 | 1.684E-9 | 0 | 15090 | gtex_brain_putamen_basal |
| rs602665 | 11 | 93490307 | C11orf54 | ENSG00000182919.10 | 1.684E-9 | 0 | 15178 | gtex_brain_putamen_basal |
| RS670871 | 11 | 93491020 | C11orf54 | ENSG00000182919.10 | 1.69E-9 | 0 | 15891 | gtex_brain_putamen_basal |
| rs616876 | 11 | 93491179 | C11orf54 | ENSG00000182919.10 | 1.684E-9 | 0 | 16050 | gtex_brain_putamen_basal |
| RS653939 | 11 | 93491464 | C11orf54 | ENSG00000182919.10 | 1.815E-9 | 0 | 16335 | gtex_brain_putamen_basal |
| rs618801 | 11 | 93491645 | C11orf54 | ENSG00000182919.10 | 1.536E-9 | 0 | 16516 | gtex_brain_putamen_basal |
| RS631177 | 11 | 93492058 | C11orf54 | ENSG00000182919.10 | 1.684E-9 | 0 | 16929 | gtex_brain_putamen_basal |
| RS640382 | 11 | 93492203 | C11orf54 | ENSG00000182919.10 | 1.475E-9 | 0 | 17074 | gtex_brain_putamen_basal |
| RS631705 | 11 | 93492232 | C11orf54 | ENSG00000182919.10 | 1.687E-9 | 0 | 17103 | gtex_brain_putamen_basal |
| rs1284102 | 11 | 93492355 | C11orf54 | ENSG00000182919.10 | 1.687E-9 | 0 | 17226 | gtex_brain_putamen_basal |
| RS606286 | 11 | 93493691 | C11orf54 | ENSG00000182919.10 | 4.448e-9 | 0 | 18562 | gtex_brain_putamen_basal |
| RS606749 | 11 | 93493825 | C11orf54 | ENSG00000182919.10 | 1.507E-9 | 0 | 18696 | gtex_brain_putamen_basal |
| RS659877 | 11 | 93493911 | C11orf54 | ENSG00000182919.10 | 1.316E-8 | 0 | 18782 | gtex_brain_putamen_basal |
| RS607615 | 11 | 93493989 | C11orf54 | ENSG00000182919.10 | 1.534E-9 | 0 | 18860 | gtex_brain_putamen_basal |
| RS611762 | 11 | 93494005 | C11orf54 | ENSG00000182919.10 | 5.469e-9 | 0 | 18876 | gtex_brain_putamen_basal |
| RS201221620 | 11 | 93494874 | C11orf54 | ENSG00000182919.10 | 2.231E-7 | 0 | 19745 | gtex_brain_putamen_basal |
| RS72097212 | 11 | 93494878 | C11orf54 | ENSG00000182919.10 | 1.511E-9 | 0 | 19749 | gtex_brain_putamen_basal |
| RS606357 | 11 | 93496377 | C11orf54 | ENSG00000182919.10 | 2.012E-10 | 0 | 21248 | gtex_brain_putamen_basal |
| RS666136 | 11 | 93496563 | C11orf54 | ENSG00000182919.10 | 1.519E-9 | 0 | 21434 | gtex_brain_putamen_basal |
| RS628661 | 11 | 93498126 | C11orf54 | ENSG00000182919.10 | 1.512E-9 | 0 | 22997 | gtex_brain_putamen_basal |
| rs630811 | 11 | 93498552 | C11orf54 | ENSG00000182919.10 | 1.532E-9 | 0 | 23423 | gtex_brain_putamen_basal |
| rs1284108 | 11 | 93498833 | C11orf54 | ENSG00000182919.10 | 2.028E-9 | 0 | 23704 | gtex_brain_putamen_basal |
| RS644535 | 11 | 93499361 | C11orf54 | ENSG00000182919.10 | 1.483E-9 | 0 | 24232 | gtex_brain_putamen_basal |
| rs56364420 | 11 | 93500659 | C11orf54 | ENSG00000182919.10 | 2.106E-10 | 0 | 25530 | gtex_brain_putamen_basal |
| RS12803773 | 11 | 93500869 | C11orf54 | ENSG00000182919.10 | 1.172E-6 | 0 | 25740 | gtex_brain_putamen_basal |
| RS138241708 | 11 | 93500889 | C11orf54 | ENSG00000182919.10 | 7.756e-8 | 0 | 25760 | gtex_brain_putamen_basal |
| RS10765633 | 11 | 93501015 | C11orf54 | ENSG00000182919.10 | 1.469E-9 | 0 | 25886 | gtex_brain_putamen_basal |
| RS10765634 | 11 | 93501093 | C11orf54 | ENSG00000182919.10 | 7.614E-8 | 0 | 25964 | gtex_brain_putamen_basal |
| RS3132751 | 11 | 93501140 | C11orf54 | ENSG00000182919.10 | 1.645E-9 | 0 | 26011 | gtex_brain_putamen_basal |
| RS3132750 | 11 | 93501148 | C11orf54 | ENSG00000182919.10 | 1.49E-9 | 0 | 26019 | gtex_brain_putamen_basal |
| RS688634 | 11 | 93504852 | C11orf54 | ENSG00000182919.10 | 4.009E-8 | 0 | 29723 | gtex_brain_putamen_basal |
| RS675441 | 11 | 93505490 | C11orf54 | ENSG00000182919.10 | 3.343E-7 | 0 | 30361 | gtex_brain_putamen_basal |
| RS658181 | 11 | 93506034 | C11orf54 | ENSG00000182919.10 | 5.416E-8 | 0 | 30905 | gtex_brain_putamen_basal |
| RS34014213 | 11 | 93506780 | C11orf54 | ENSG00000182919.10 | 8.462e-7 | 0 | 31651 | gtex_brain_putamen_basal |
| RS80312811 | 11 | 93506787 | C11orf54 | ENSG00000182919.10 | 8.465e-7 | 0 | 31658 | gtex_brain_putamen_basal |
| RS585713 | 11 | 93507249 | C11orf54 | ENSG00000182919.10 | 7.014e-8 | 0 | 32120 | gtex_brain_putamen_basal |
| RS586293 | 11 | 93507935 | C11orf54 | ENSG00000182919.10 | 8.241E-8 | 0 | 32806 | gtex_brain_putamen_basal |
| rs693947 | 11 | 93508243 | C11orf54 | ENSG00000182919.10 | 3.207E-7 | 0 | 33114 | gtex_brain_putamen_basal |
| RS199911190 | 11 | 93509184 | C11orf54 | ENSG00000182919.10 | 5.476E-8 | 0 | 34055 | gtex_brain_putamen_basal |
| RS201211012 | 11 | 93509185 | C11orf54 | ENSG00000182919.10 | 1.004e-7 | 0 | 34056 | gtex_brain_putamen_basal |
| RS625249 | 11 | 93510141 | C11orf54 | ENSG00000182919.10 | 8.84e-8 | 0 | 35012 | gtex_brain_putamen_basal |
| RS675501 | 11 | 93510488 | C11orf54 | ENSG00000182919.10 | 8.947E-8 | 0 | 35359 | gtex_brain_putamen_basal |
| RS200173841 | 11 | 93510646 | C11orf54 | ENSG00000182919.10 | 1.077E-6 | 0 | 35517 | gtex_brain_putamen_basal |
| RS200697487 | 11 | 93510647 | C11orf54 | ENSG00000182919.10 | 1.563E-8 | 0 | 35518 | gtex_brain_putamen_basal |
| rs623017 | 11 | 93510648 | C11orf54 | ENSG00000182919.10 | 2.353E-8 | 0 | 35519 | gtex_brain_putamen_basal |
| RS664619 | 11 | 93510656 | C11orf54 | ENSG00000182919.10 | 5.795E-7 | 0 | 35527 | gtex_brain_putamen_basal |
| rs622147 | 11 | 93510858 | C11orf54 | ENSG00000182919.10 | 9.055e-8 | 0 | 35729 | gtex_brain_putamen_basal |
| RS4753103 | 11 | 93511119 | C11orf54 | ENSG00000182919.10 | 7.834e-8 | 0 | 35990 | gtex_brain_putamen_basal |
| RS12292460 | 11 | 93511562 | C11orf54 | ENSG00000182919.10 | 9.937E-8 | 0 | 36433 | gtex_brain_putamen_basal |
| rs4753501 | 11 | 93512152 | C11orf54 | ENSG00000182919.10 | 5.215E-7 | 0 | 37023 | gtex_brain_putamen_basal |
| RS2434984 | 11 | 93512915 | C11orf54 | ENSG00000182919.10 | 8.915E-8 | 0 | 37786 | gtex_brain_putamen_basal |
| RS10831102 | 11 | 93513206 | C11orf54 | ENSG00000182919.10 | 9.055e-8 | 0 | 38077 | gtex_brain_putamen_basal |
| RS397840997 | 11 | 93514833 | C11orf54 | ENSG00000182919.10 | 2.339E-8 | 0 | 39704 | gtex_brain_putamen_basal |
| RS598376 | 11 | 93515058 | C11orf54 | ENSG00000182919.10 | 9.055e-8 | 0 | 39929 | gtex_brain_putamen_basal |
| RS598427 | 11 | 93515103 | C11orf54 | ENSG00000182919.10 | 9.068e-8 | 0 | 39974 | gtex_brain_putamen_basal |
| RS1428919 | 11 | 93516016 | C11orf54 | ENSG00000182919.10 | 9.055e-8 | 0 | 40887 | gtex_brain_putamen_basal |
| RS662070 | 11 | 93516204 | C11orf54 | ENSG00000182919.10 | 8.679E-8 | 0 | 41075 | gtex_brain_putamen_basal |
| RS640864 | 11 | 93516432 | C11orf54 | ENSG00000182919.10 | 9.055e-8 | 0 | 41303 | gtex_brain_putamen_basal |
| RS652621 | 11 | 93516772 | C11orf54 | ENSG00000182919.10 | 9.055e-8 | 0 | 41643 | gtex_brain_putamen_basal |
| RS655158 | 11 | 93517299 | C11orf54 | ENSG00000182919.10 | 9.055e-8 | 0 | 42170 | gtex_brain_putamen_basal |
| RS7116967 | 11 | 93517874 | C11orf54 | ENSG00000182919.10 | 8.579E-8 | 0 | 42745 | gtex_brain_putamen_basal |
| RS2848477 | 11 | 93517886 | C11orf54 | ENSG00000182919.10 | 8.606E-8 | 0 | 42757 | gtex_brain_putamen_basal |
| RS532888132 | 11 | 93519170 | C11orf54 | ENSG00000182919.10 | 1.131E-6 | 0 | 44041 | gtex_brain_putamen_basal |
| rs588644 | 11 | 93519673 | C11orf54 | ENSG00000182919.10 | 6.013E-8 | 0 | 44544 | gtex_brain_putamen_basal |
| rs658797 | 11 | 93519737 | C11orf54 | ENSG00000182919.10 | 8.723e-8 | 0 | 44608 | gtex_brain_putamen_basal |
| rs658698 | 11 | 93527684 | C11orf54 | ENSG00000182919.10 | 5.842e-7 | 0 | 52555 | gtex_brain_putamen_basal |
| RS655699 | 11 | 93534990 | C11orf54 | ENSG00000182919.10 | 5.842e-7 | 0 | 59861 | gtex_brain_putamen_basal |
| RS11020521 | 11 | 93538992 | C11orf54 | ENSG00000182919.10 | 1.451E-9 | 0 | 63863 | gtex_brain_putamen_basal |
| RS11020522 | 11 | 93539050 | C11orf54 | ENSG00000182919.10 | 5.842e-7 | 0 | 63921 | gtex_brain_putamen_basal |
| rs673869 | 11 | 93540001 | C11orf54 | ENSG00000182919.10 | 5.842e-7 | 0 | 64872 | gtex_brain_putamen_basal |
| RS644009 | 11 | 93550568 | C11orf54 | ENSG00000182919.10 | 5.842e-7 | 0 | 75439 | gtex_brain_putamen_basal |
| RS11286324 | 11 | 93550744 | C11orf54 | ENSG00000182919.10 | 8.867e-8 | 0 | 75615 | gtex_brain_putamen_basal |
| RS601711 | 11 | 93564393 | C11orf54 | ENSG00000182919.10 | 7.006E-7 | 0 | 89264 | gtex_brain_putamen_basal |
第二节。转录组注释
一般基因表达（GTEX）
Devlopment期间的基因表达（BrainCloud）
Footnote:
共有269个时间点秘密策划,n = 38胎儿samples (x=1:38). Each triangle represents one time point.
时间变化的基因表达（brainspan）
Footnote:
SC：亚皮质区域；SM：感觉运动区域；FC：额叶皮层；和TP：颞顶皮层
ST1：胎儿（13-26个概念后周），ST2：婴儿早期至童年（4个月至11年）和ST3：青春期至成年期（13-23岁）
所示的栏表示表达分布的较低25％和上层25％。