Summary?
GeneID 2952
Symbol GSTT1
Synonyms -
Description glutathione S-transferase theta 1
Reference MIM:600436|HGNC:HGNC:4641|HPRD:02700|
Gene type protein-coding
Map location 22Q11.23
Pascal p-value 0.017
Sherlock p-value 0.794
Fetal beta -0.869
eGene Anterior cingulate cortex BA24
Caudate basal ganglia
Cerebellar Hemisphere
Cerebellum
Cortex
Frontal Cortex BA9
Hippocampus
Hypothalamus
Nucleus accumbens basal ganglia
Putamen basal ganglia
Myers' cis & trans
Meta

Gene in Data Sources
Gene set name Method of gene set Description Info
PMID:cooccur High-throughput literature-search Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included.
Association A combined odds ratio method (Sun et al. 2008),协会研究 1 Link to SZGene
GSMA_I Genome scan meta-analysis PSR:0.031
文学 High-throughput literature-search Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenic,schizophrenias Click to show details

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP ID Chromosome Position eGene Gene Entrez ID pvalue qvalue TSS distance eQTL type
rs4428104 chr22 24210049 GSTT1 2952 7.728E-5 cis
rs1129067 chr22 24228124 GSTT1 2952 8.684E-5 cis
rs9612503 chr22 24232874 GSTT1 2952 0 cis
rs5760090 chr22 24233591 GSTT1 2952 0.02 cis
rs738806 chr22 24234171 GSTT1 2952 0.01 cis
rs2000467 chr22 24241532 GSTT1 2952 1.886E-6 cis
rs5751761 chr22 24243735 GSTT1 2952 5.025E-9 cis
rs2154594 chr22 24254054 GSTT1 2952 9.641E-8 cis
rs2186366 chr22 24254112 GSTT1 2952 5.347E-7 cis
rs1002286 chr22 24257336 GSTT1 2952 6.959E-8 cis
rs6003980 chr22 24283515 GSTT1 2952 2.997E-6 cis
rs17004811 chr22 24404829 GSTT1 2952 3.714 e - cis
rs738809 chr22 24405491 GSTT1 2952 3.961E-9 cis
RS12218072 chr10 115540900 GSTT1 2952 0.16 trans
rs9749085 chr19 58142485 GSTT1 2952 0.15 trans
rs4428104 chr22 24210049 GSTT1 2952 0.01 trans
rs1129067 chr22 24228124 GSTT1 2952 0.01 trans
rs9612503 chr22 24232874 GSTT1 2952 0.13 trans
rs2000467 chr22 24241532 GSTT1 2952 3.372E-4 trans
rs5751761 chr22 24243735 GSTT1 2952 1.234E-6 trans
rs2154594 chr22 24254054 GSTT1 2952 2.091E-5 trans
rs2186366 chr22 24254112 GSTT1 2952 1.053E-4 trans
rs1002286 chr22 24257336 GSTT1 2952 1.558E-5 trans
rs6003980 chr22 24283515 GSTT1 2952 5.303E-4 trans
rs17004811 chr22 24404829 GSTT1 2952 7.535E-5 trans
rs738809 chr22 24405491 GSTT1 2952 9.711E-7 trans
rs1007888 22 24241101 GSTT1 ENSG00000184674.8 8.197E-14 0 143579 gtex_brain_ba24
rs2000467 22 24241533 GSTT1 ENSG00000184674.8 6.168E-9 0 143147 gtex_brain_ba24
rs2000468 22 24241611 GSTT1 ENSG00000184674.8 1.842E-13 0 143069 gtex_brain_ba24
RS4822450 22 24242887 GSTT1 ENSG00000184674.8 8.197E-14 0 141793 gtex_brain_ba24
rs4820571 22 24242973 GSTT1 ENSG00000184674.8 1.07E-10 0 141707 gtex_brain_ba24
rs5751760 22 24243573 GSTT1 ENSG00000184674.8 1.842E-13 0 141107 gtex_brain_ba24
rs5751761 22 24243736 GSTT1 ENSG00000184674.8 8.197E-14 0 140944 gtex_brain_ba24
rs2000469 22 24245292 GSTT1 ENSG00000184674.8 2.991E-8 0 139388 gtex_brain_ba24
rs5760095 22 24247293 GSTT1 ENSG00000184674.8 1.188E-13 0 137387 gtex_brain_ba24
rs5760096 22 24247310 GSTT1 ENSG00000184674.8 9.603E-7 0 137370 gtex_brain_ba24
rs5760097 22 24247794 GSTT1 ENSG00000184674.8 2.406E-9 0 136886 gtex_brain_ba24
RS4822451 22 24248166 GSTT1 ENSG00000184674.8 3.834E-10 0 136514 gtex_brain_ba24
rs5760098 22 24248314 GSTT1 ENSG00000184674.8 3.834E-10 0 136366 gtex_brain_ba24
rs5760099 22 24248414 GSTT1 ENSG00000184674.8 3.834E-10 0 136266 gtex_brain_ba24
rs5760101 22 24248712 GSTT1 ENSG00000184674.8 4.242E-7 0 135968 gtex_brain_ba24
rs5760102 22 24248761 GSTT1 ENSG00000184674.8 3.834E-10 0 135919 gtex_brain_ba24
rs5760103 22 24248781 GSTT1 ENSG00000184674.8 1.808E-6 0 135899 gtex_brain_ba24
rs5751764 22 24249458 GSTT1 ENSG00000184674.8 3.729E-9 0 135222 gtex_brain_ba24
rs5751765 22 24249486 GSTT1 ENSG00000184674.8 3.612E-9 0 135194 gtex_brain_ba24
rs5760104 22 24249573 GSTT1 ENSG00000184674.8 2.349E-12 0 135107 gtex_brain_ba24
rs5751766 22 24249616 GSTT1 ENSG00000184674.8 7.107E-11 0 135064 gtex_brain_ba24
rs5751767 22 24249688 GSTT1 ENSG00000184674.8 2.054E-8 0 134992 gtex_brain_ba24
rs5751768 22 24249800 GSTT1 ENSG00000184674.8 3.654E-10 0 134880 gtex_brain_ba24
rs4820572 22 24250355 GSTT1 ENSG00000184674.8 5.042E-10 0 134325 gtex_brain_ba24
rs5760106 22 24250645 GSTT1 ENSG00000184674.8 5.042E-10 0 134035 gtex_brain_ba24
rs2330634 22 24250795 GSTT1 ENSG00000184674.8 1.031E-10 0 133885 gtex_brain_ba24
rs2330635 22 24251344 GSTT1 ENSG00000184674.8 1.456E-10 0 133336 gtex_brain_ba24
rs2877178 22 24251517 GSTT1 ENSG00000184674.8 1.28e-10 0 133163 gtex_brain_ba24
rs3884794 22 24251766 GSTT1 ENSG00000184674.8 1.514E-6 0 132914 gtex_brain_ba24
rs2154593 22 24252085 GSTT1 ENSG00000184674.8 1.28e-10 0 132595 gtex_brain_ba24
rs5760107 22 24252597 GSTT1 ENSG00000184674.8 1.456E-10 0 132083 gtex_brain_ba24
rs5760108 22 24252668 GSTT1 ENSG00000184674.8 1.28e-10 0 132012 gtex_brain_ba24
rs5751770 22 24252842 GSTT1 ENSG00000184674.8 1.28e-10 0 131838 gtex_brain_ba24
rs5760109 22 24252938 GSTT1 ENSG00000184674.8 1.456E-10 0 131742 gtex_brain_ba24
rs2154594 22 24254055 GSTT1 ENSG00000184674.8 3.683E-10 0 130625 gtex_brain_ba24
rs2186366 22 24254113 GSTT1 ENSG00000184674.8 4.272E-10 0 130567 gtex_brain_ba24
RS4822452 22 24254363 GSTT1 ENSG00000184674.8 4.89E-10 0 130317 gtex_brain_ba24
RS4822453 22 24254862 GSTT1 ENSG00000184674.8 3.721E-12 0 129818 gtex_brain_ba24
RS4822454 22 24255208 GSTT1 ENSG00000184674.8 4.272E-10 0 129472 gtex_brain_ba24
RS4822455 22 24255296 GSTT1 ENSG00000184674.8 7.217E-12 0 129384 gtex_brain_ba24
rs5844574 22 24256102 GSTT1 ENSG00000184674.8 4.392E-14 0 128578 gtex_brain_ba24
rs398036636 22 24256692 GSTT1 ENSG00000184674.8 7.217E-12 0 127988 gtex_brain_ba24
rs1002286 22 24257337 GSTT1 ENSG00000184674.8 3.859E-14 0 127343 gtex_brain_ba24
rs5751771 22 24258777 GSTT1 ENSG00000184674.8 2.299E-11 0 125903 gtex_brain_ba24
rs5760112 22 24259772 GSTT1 ENSG00000184674.8 2.639E-14 0 124908 gtex_brain_ba24
rs1892713 22 24260463 GSTT1 ENSG00000184674.8 3.538E-13 0 124217 gtex_brain_ba24
rs915589 22 24261004 GSTT1 ENSG00000184674.8 2.596E-6 0 123676 gtex_brain_ba24
rs7511536 22 24261673 GSTT1 ENSG00000184674.8 1.893E-6 0 123007 gtex_brain_ba24
rs6519489 22 24261846 GSTT1 ENSG00000184674.8 1.873E-6 0 122834 gtex_brain_ba24
rs11090298 22 24262061 GSTT1 ENSG00000184674.8 2.086E-6 0 122619 gtex_brain_ba24
RS4822457 22 24263474 GSTT1 ENSG00000184674.8 4.466E-13 0 121206 gtex_brain_ba24
rs6003959 22 24264395 GSTT1 ENSG00000184674.8 2.086E-6 0 120285 gtex_brain_ba24
RS4822458 22 24265659 GSTT1 ENSG00000184674.8 2.103E-14 0 119021 gtex_brain_ba24
rs5751775 22 24266726 GSTT1 ENSG00000184674.8 6.356E-13 0 117954 gtex_brain_ba24
rs5760119 22 24266831 GSTT1 ENSG00000184674.8 5.658E-13 0 117849 gtex_brain_ba24
rs5760120 22 24266867 GSTT1 ENSG00000184674.8 5.438E-13 0 117813 gtex_brain_ba24
rs5751776 22 24266954 GSTT1 ENSG00000184674.8 4.336e-13 0 117726 gtex_brain_ba24
rs5751777 22 24267047 GSTT1 ENSG00000184674.8 9.723e-13 0 117633 gtex_brain_ba24
rs34819965 22 24267078 GSTT1 ENSG00000184674.8 1.768E-15 0 117602 gtex_brain_ba24
RS9612520 22 24269459 GSTT1 ENSG00000184674.8 1.238E-15 0 115221 gtex_brain_ba24
RS4585126 22 24270005 GSTT1 ENSG00000184674.8 2.347E-6 0 114675 gtex_brain_ba24
rs5760124 22 24272122 GSTT1 ENSG00000184674.8 1.215E-15 0 112558 gtex_brain_ba24
rs397754387 22 24273325 GSTT1 ENSG00000184674.8 1.201E-15 0 111355 gtex_brain_ba24
rs139038251 22 24291927 GSTT1 ENSG00000184674.8 2.858E-11 0 92753 gtex_brain_ba24
rs113413 22 24292264 GSTT1 ENSG00000184674.8 9.764E-7 0 92416 gtex_brain_ba24
rs1985951 22 24292488 GSTT1 ENSG00000184674.8 8.125E-13 0 92192 gtex_brain_ba24
RS2844003 22 24292957 GSTT1 ENSG00000184674.8 2.314E-12 0 91723 gtex_brain_ba24
rs1970980 22 24293656 GSTT1 ENSG00000184674.8 1.814E-7 0 91024 gtex_brain_ba24
rs140264 22 24293976 GSTT1 ENSG00000184674.8 1.109E-12 0 90704 gtex_brain_ba24
rs2330649 22 24295053 GSTT1 ENSG00000184674.8 2.486E-12 0 89627 gtex_brain_ba24
rs575146 22 24295074 GSTT1 ENSG00000184674.8 5.128e-10 0 89606 gtex_brain_ba24
rs575220 22 24295103 GSTT1 ENSG00000184674.8 3.203E-10 0 89577 gtex_brain_ba24
rs2858907 22 24295217 GSTT1 ENSG00000184674.8 2.122E-12 0 89463 gtex_brain_ba24
rs2739330 22 24295286 GSTT1 ENSG00000184674.8 2.105E-12 0 89394 gtex_brain_ba24
rs6003988 22 24295388 GSTT1 ENSG00000184674.8 6.586E-8 0 89292 gtex_brain_ba24
rs2739334 22 24295427 GSTT1 ENSG00000184674.8 1.9E-14 0 89253 gtex_brain_ba24
rs6003989 22 24295496 GSTT1 ENSG00000184674.8 8.332E-7 0 89184 gtex_brain_ba24
rs2739335 22 24295805 GSTT1 ENSG00000184674.8 8.625E-12 0 88875 gtex_brain_ba24
rs6003991 22 24295813 GSTT1 ENSG00000184674.8 1.346E-7 0 88867 gtex_brain_ba24
rs140244 22 24296056 GSTT1 ENSG00000184674.8 1.784E-13 0 88624 gtex_brain_ba24
rs12483950 22 24296175 GSTT1 ENSG00000184674.8 2.476E-11 0 88505 gtex_brain_ba24
rs12484324 22 24296294 GSTT1 ENSG00000184674.8 3.065E-7 0 88386 gtex_brain_ba24
rs12483869 22 24296302 GSTT1 ENSG00000184674.8 8.013E-12 0 88378 gtex_brain_ba24
rs2739337 22 24296483 GSTT1 ENSG00000184674.8 2.108E-11 0 88197 gtex_brain_ba24
rs2097433 22 24296894 GSTT1 ENSG00000184674.8 2.217E-14 0 87786 gtex_brain_ba24
rs2739338 22 24297130 GSTT1 ENSG00000184674.8 3.671E-12 0 87550 gtex_brain_ba24
RS2253552 22 24297287 GSTT1 ENSG00000184674.8 2.417E-12 0 87393 gtex_brain_ba24
rs2154601 22 24297866 GSTT1 ENSG00000184674.8 5.157E-12 0 86814 gtex_brain_ba24
rs2739343 22 24298180 GSTT1 ENSG00000184674.8 5.544E-12 0 86500 gtex_brain_ba24
rs2858913 22 24298182 GSTT1 ENSG00000184674.8 5.476E-12 0 86498 gtex_brain_ba24
rs2739344 22 24298293 GSTT1 ENSG00000184674.8 2.76E-11 0 86387 gtex_brain_ba24
rs2858914 22 24298325 GSTT1 ENSG00000184674.8 1.906e-11 0 86355 gtex_brain_ba24
RS5760130 22 24299072 GSTT1 ENSG00000184674.8 1.661E-12 0 85608 gtex_brain_ba24
rs5742303 22 24299147 GSTT1 ENSG00000184674.8 4.948E-12 0 85533 gtex_brain_ba24
rs140193 22 24300683 GSTT1 ENSG00000184674.8 9.607E-8 0 83997 gtex_brain_ba24
rs201920824 22 24300701 GSTT1 ENSG00000184674.8 8.295E-7 0 83979 gtex_brain_ba24
rs482710 22 24301972 GSTT1 ENSG00000184674.8 4.66E-8 0 82708 gtex_brain_ba24
rs141411932 22 24302194 GSTT1 ENSG00000184674.8 3.312E-9 0 82486 gtex_brain_ba24
RS4822466 22 24312204 GSTT1 ENSG00000184674.8 3.826E-15 0 72476 gtex_brain_ba24
rs1006771 22 24314006 GSTT1 ENSG00000184674.8 6.671E-8 0 70674 gtex_brain_ba24
rs139012979 22 24323514 GSTT1 ENSG00000184674.8 1.378E-10 0 61166 gtex_brain_ba24
rs436740 22 24323878 GSTT1 ENSG00000184674.8 1.28E-6 0 60802 gtex_brain_ba24
rs140188 22 24324052 GSTT1 ENSG00000184674.8 3.713E-10 0 60628 gtex_brain_ba24
rs149686121 22 24325047 GSTT1 ENSG00000184674.8 1.948E-8 0 59633 gtex_brain_ba24
rs140220 22 24328021 GSTT1 ENSG00000184674.8 1.391E-9 0 56659 gtex_brain_ba24
rs140221 22 24328163 GSTT1 ENSG00000184674.8 5.895E-9 0 56517 gtex_brain_ba24
rs140240 22 24329435 GSTT1 ENSG00000184674.8 4.324E-7 0 55245 gtex_brain_ba24
rs2739329 22 24334209 GSTT1 ENSG00000184674.8 5.225E-11 0 50471 gtex_brain_ba24
rs7289655 22 24335228 GSTT1 ENSG00000184674.8 5.242E-8 0 49452 gtex_brain_ba24
RS2739332 22 24335506 GSTT1 ENSG00000184674.8 2.859E-9 0 49174 gtex_brain_ba24
RS2739333 22 24335586 GSTT1 ENSG00000184674.8 2.063E-9 0 49094 gtex_brain_ba24
rs140288 22 24335977 GSTT1 ENSG00000184674.8 2.859E-9 0 48703 gtex_brain_ba24
RS2844004 22 24336531 GSTT1 ENSG00000184674.8 2.886E-9 0 48149 gtex_brain_ba24
RS2262477 22 24338936 GSTT1 ENSG00000184674.8 2.92E-11 0 45744 gtex_brain_ba24
rs55784417 22 24342791 GSTT1 ENSG00000184674.8 1.157E-6 0 41889 gtex_brain_ba24
rs1007888 22 24241101 GSTT1 ENSG00000184674.8 1.331E-10 0 143579 gtex_brain_putamen_basal
rs2000467 22 24241533 GSTT1 ENSG00000184674.8 1.184E-7 0 143147 gtex_brain_putamen_basal
rs2000468 22 24241611 GSTT1 ENSG00000184674.8 1.305E-9 0 143069 gtex_brain_putamen_basal
RS4822450 22 24242887 GSTT1 ENSG00000184674.8 1.331E-10 0 141793 gtex_brain_putamen_basal
rs4820571 22 24242973 GSTT1 ENSG00000184674.8 5.693E-8 0 141707 gtex_brain_putamen_basal
rs5751760 22 24243573 GSTT1 ENSG00000184674.8 1.305E-9 0 141107 gtex_brain_putamen_basal
rs5751761 22 24243736 GSTT1 ENSG00000184674.8 1.331E-10 0 140944 gtex_brain_putamen_basal
rs2000469 22 24245292 GSTT1 ENSG00000184674.8 3.034E-6 0 139388 gtex_brain_putamen_basal
rs5760095 22 24247293 GSTT1 ENSG00000184674.8 4.376E-12 0 137387 gtex_brain_putamen_basal
rs5760096 22 24247310 GSTT1 ENSG00000184674.8 1.128E-7 0 137370 gtex_brain_putamen_basal
rs5760097 22 24247794 GSTT1 ENSG00000184674.8 2.319E-9 0 136886 gtex_brain_putamen_basal
RS4822451 22 24248166 GSTT1 ENSG00000184674.8 1.012E-9 0 136514 gtex_brain_putamen_basal
rs5760098 22 24248314 GSTT1 ENSG00000184674.8 1.012E-9 0 136366 gtex_brain_putamen_basal
rs5760099 22 24248414 GSTT1 ENSG00000184674.8 1.012E-9 0 136266 gtex_brain_putamen_basal
rs5760101 22 24248712 GSTT1 ENSG00000184674.8 6.338E-8 0 135968 gtex_brain_putamen_basal
rs5760102 22 24248761 GSTT1 ENSG00000184674.8 1.012E-9 0 135919 gtex_brain_putamen_basal
rs5751764 22 24249458 GSTT1 ENSG00000184674.8 1.591E-7 0 135222 gtex_brain_putamen_basal
rs5751765 22 24249486 GSTT1 ENSG00000184674.8 2.901E-10 0 135194 gtex_brain_putamen_basal
rs5760104 22 24249573 GSTT1 ENSG00000184674.8 1.544E-11 0 135107 gtex_brain_putamen_basal
rs5751766 22 24249616 GSTT1 ENSG00000184674.8 2.52E-9 0 135064 gtex_brain_putamen_basal
rs5751767 22 24249688 GSTT1 ENSG00000184674.8 2.937E-10 0 134992 gtex_brain_putamen_basal
rs5760105 22 24249739 GSTT1 ENSG00000184674.8 1.487E-7 0 134941 gtex_brain_putamen_basal
rs5751768 22 24249800 GSTT1 ENSG00000184674.8 2.038E-10 0 134880 gtex_brain_putamen_basal
rs4820572 22 24250355 GSTT1 ENSG00000184674.8 8.113E-11 0 134325 gtex_brain_putamen_basal
rs5760106 22 24250645 GSTT1 ENSG00000184674.8 9.846E-11 0 134035 gtex_brain_putamen_basal
rs2330634 22 24250795 GSTT1 ENSG00000184674.8 3.988E-9 0 133885 gtex_brain_putamen_basal
rs2330635 22 24251344 GSTT1 ENSG00000184674.8 5.533E-11 0 133336 gtex_brain_putamen_basal
rs2877178 22 24251517 GSTT1 ENSG00000184674.8 6.286E-10 0 133163 gtex_brain_putamen_basal
rs3884794 22 24251766 GSTT1 ENSG00000184674.8 1.489E-6 0 132914 gtex_brain_putamen_basal
rs2154593 22 24252085 GSTT1 ENSG00000184674.8 6.286E-10 0 132595 gtex_brain_putamen_basal
rs5760107 22 24252597 GSTT1 ENSG00000184674.8 5.533E-11 0 132083 gtex_brain_putamen_basal
rs5760108 22 24252668 GSTT1 ENSG00000184674.8 6.286E-10 0 132012 gtex_brain_putamen_basal
rs5751770 22 24252842 GSTT1 ENSG00000184674.8 6.286E-10 0 131838 gtex_brain_putamen_basal
rs5760109 22 24252938 GSTT1 ENSG00000184674.8 5.533E-11 0 131742 gtex_brain_putamen_basal
rs2154594 22 24254055 GSTT1 ENSG00000184674.8 5.246E-11 0 130625 gtex_brain_putamen_basal
rs2186366 22 24254113 GSTT1 ENSG00000184674.8 5.533E-11 0 130567 gtex_brain_putamen_basal
RS4822452 22 24254363 GSTT1 ENSG00000184674.8 1.232E-10 0 130317 gtex_brain_putamen_basal
RS4822453 22 24254862 GSTT1 ENSG00000184674.8 3.797E-11 0 129818 gtex_brain_putamen_basal
RS4822454 22 24255208 GSTT1 ENSG00000184674.8 5.533E-11 0 129472 gtex_brain_putamen_basal
RS4822455 22 24255296 GSTT1 ENSG00000184674.8 1.083E-9 0 129384 gtex_brain_putamen_basal
rs5844574 22 24256102 GSTT1 ENSG00000184674.8 2.661E-12 0 128578 gtex_brain_putamen_basal
rs398036636 22 24256692 GSTT1 ENSG00000184674.8 3.631E-10 0 127988 gtex_brain_putamen_basal
rs1002286 22 24257337 GSTT1 ENSG00000184674.8 7.019E-13 0 127343 gtex_brain_putamen_basal
rs5751771 22 24258777 GSTT1 ENSG00000184674.8 9.051E-11 0 125903 gtex_brain_putamen_basal
rs5760112 22 24259772 GSTT1 ENSG00000184674.8 7.019E-13 0 124908 gtex_brain_putamen_basal
rs1892713 22 24260463 GSTT1 ENSG00000184674.8 1.218E-12 0 124217 gtex_brain_putamen_basal
rs915589 22 24261004 GSTT1 ENSG00000184674.8 1.993E-7 0 123676 gtex_brain_putamen_basal
rs62241075 22 24261297 GSTT1 ENSG00000184674.8 1.047E-6 0 123383 gtex_brain_putamen_basal
rs7511536 22 24261673 GSTT1 ENSG00000184674.8 1.508E-6 0 123007 gtex_brain_putamen_basal
rs201997288 22 24261845 GSTT1 ENSG00000184674.8 1.161E-6 0 122835 gtex_brain_putamen_basal
rs6519489 22 24261846 GSTT1 ENSG00000184674.8 9.409E-7 0 122834 gtex_brain_putamen_basal
rs11090298 22 24262061 GSTT1 ENSG00000184674.8 1.047E-6 0 122619 gtex_brain_putamen_basal
RS4822457 22 24263474 GSTT1 ENSG00000184674.8 1.417E-12 0 121206 gtex_brain_putamen_basal
rs6003957 22 24263543 GSTT1 ENSG00000184674.8 1.047E-6 0 121137 gtex_brain_putamen_basal
rs6003958 22 24264089 GSTT1 ENSG00000184674.8 1.045E-6 0 120591 gtex_brain_putamen_basal
rs6003959 22 24264395 GSTT1 ENSG00000184674.8 1.047E-6 0 120285 gtex_brain_putamen_basal
RS4822458 22 24265659 GSTT1 ENSG00000184674.8 2.394e-13 0 119021 gtex_brain_putamen_basal
rs5751775 22 24266726 GSTT1 ENSG00000184674.8 1.22E-10 0 117954 gtex_brain_putamen_basal
rs5760119 22 24266831 GSTT1 ENSG00000184674.8 6.286E-11 0 117849 gtex_brain_putamen_basal
rs5760120 22 24266867 GSTT1 ENSG00000184674.8 6.174E-11 0 117813 gtex_brain_putamen_basal
rs5751776 22 24266954 GSTT1 ENSG00000184674.8 6.044E-11 0 117726 gtex_brain_putamen_basal
rs5751777 22 24267047 GSTT1 ENSG00000184674.8 6.914E-11 0 117633 gtex_brain_putamen_basal
rs34819965 22 24267078 GSTT1 ENSG00000184674.8 6.09E-14 0 117602 gtex_brain_putamen_basal
RS9612520 22 24269459 GSTT1 ENSG00000184674.8 6.459E-14 0 115221 gtex_brain_putamen_basal
RS4585126 22 24270005 GSTT1 ENSG00000184674.8 1.281E-7 0 114675 gtex_brain_putamen_basal
rs5760124 22 24272122 GSTT1 ENSG00000184674.8 6.615E-14 0 112558 gtex_brain_putamen_basal
rs397754387 22 24273325 GSTT1 ENSG00000184674.8 6.6E-14 0 111355 gtex_brain_putamen_basal
rs59202133 22 24285936 GSTT1 ENSG00000184674.8 1.97E-6 0 98744 gtex_brain_putamen_basal
rs57108466 22 24285938 GSTT1 ENSG00000184674.8 2.87E-6 0 98742 gtex_brain_putamen_basal
rs7289823 22 24288319 GSTT1 ENSG00000184674.8 1.237E-6 0 96361 gtex_brain_putamen_basal
rs28733907 22 24291484 GSTT1 ENSG00000184674.8 1.896E-7 0 93196 gtex_brain_putamen_basal
RS28416451 22 24291498 GSTT1 ENSG00000184674.8 1.44E-6 0 93182 gtex_brain_putamen_basal
rs139038251 22 24291927 GSTT1 ENSG00000184674.8 3.111E-10 0 92753 gtex_brain_putamen_basal
rs113413 22 24292264 GSTT1 ENSG00000184674.8 1.084E-8 0 92416 gtex_brain_putamen_basal
rs1985951 22 24292488 GSTT1 ENSG00000184674.8 1.404E-10 0 92192 gtex_brain_putamen_basal
RS2844003 22 24292957 GSTT1 ENSG00000184674.8 2.343E-10 0 91723 gtex_brain_putamen_basal
rs1970980 22 24293656 GSTT1 ENSG00000184674.8 1.075E-8 0 91024 gtex_brain_putamen_basal
rs140264 22 24293976 GSTT1 ENSG00000184674.8 3.106E-11 0 90704 gtex_brain_putamen_basal
rs2330649 22 24295053 GSTT1 ENSG00000184674.8 1.992E-10 0 89627 gtex_brain_putamen_basal
rs575146 22 24295074 GSTT1 ENSG00000184674.8 5.687E-9 0 89606 gtex_brain_putamen_basal
rs575220 22 24295103 GSTT1 ENSG00000184674.8 4.231E-10 0 89577 gtex_brain_putamen_basal
rs2858907 22 24295217 GSTT1 ENSG00000184674.8 1.502E-10 0 89463 gtex_brain_putamen_basal
rs2739330 22 24295286 GSTT1 ENSG00000184674.8 1.477E-10 0 89394 gtex_brain_putamen_basal
rs6003988 22 24295388 GSTT1 ENSG00000184674.8 2.464E-8 0 89292 gtex_brain_putamen_basal
rs2739334 22 24295427 GSTT1 ENSG00000184674.8 2.011E-11 0 89253 gtex_brain_putamen_basal
rs6003989 22 24295496 GSTT1 ENSG00000184674.8 2.864E-8 0 89184 gtex_brain_putamen_basal
rs2739335 22 24295805 GSTT1 ENSG00000184674.8 8.712E-10 0 88875 gtex_brain_putamen_basal
rs6003991 22 24295813 GSTT1 ENSG00000184674.8 8.992E-9 0 88867 gtex_brain_putamen_basal
rs140244 22 24296056 GSTT1 ENSG00000184674.8 6.418E-11 0 88624 gtex_brain_putamen_basal
rs12483950 22 24296175 GSTT1 ENSG00000184674.8 4.702E-9 0 88505 gtex_brain_putamen_basal
rs12484324 22 24296294 GSTT1 ENSG00000184674.8 2.987E-8 0 88386 gtex_brain_putamen_basal
rs12483869 22 24296302 GSTT1 ENSG00000184674.8 3.732E-10 0 88378 gtex_brain_putamen_basal
rs2739337 22 24296483 GSTT1 ENSG00000184674.8 1.67E-9 0 88197 gtex_brain_putamen_basal
rs2097433 22 24296894 GSTT1 ENSG00000184674.8 2.294E-11 0 87786 gtex_brain_putamen_basal
rs2739338 22 24297130 GSTT1 ENSG00000184674.8 8.269E-10 0 87550 gtex_brain_putamen_basal
RS2253552 22 24297287 GSTT1 ENSG00000184674.8 1.732E-10 0 87393 gtex_brain_putamen_basal
rs2154601 22 24297866 GSTT1 ENSG00000184674.8 9.636E-10 0 86814 gtex_brain_putamen_basal
rs2739343 22 24298180 GSTT1 ENSG00000184674.8 1.564E-9 0 86500 gtex_brain_putamen_basal
rs2858913 22 24298182 GSTT1 ENSG00000184674.8 1.571E-9 0 86498 gtex_brain_putamen_basal
rs2739344 22 24298293 GSTT1 ENSG00000184674.8 2.364E-9 0 86387 gtex_brain_putamen_basal
rs2858914 22 24298325 GSTT1 ENSG00000184674.8 2.43E-9 0 86355 gtex_brain_putamen_basal
RS5760130 22 24299072 GSTT1 ENSG00000184674.8 9.698E-11 0 85608 gtex_brain_putamen_basal
rs5742303 22 24299147 GSTT1 ENSG00000184674.8 8.328E-10 0 85533 gtex_brain_putamen_basal
rs140193 22 24300683 GSTT1 ENSG00000184674.8 1.314E-7 0 83997 gtex_brain_putamen_basal
rs201920824 22 24300701 GSTT1 ENSG00000184674.8 8.994E-7 0 83979 gtex_brain_putamen_basal
rs482710 22 24301972 GSTT1 ENSG00000184674.8 3.077E-8 0 82708 gtex_brain_putamen_basal
rs141411932 22 24302194 GSTT1 ENSG00000184674.8 2.008E-8 0 82486 gtex_brain_putamen_basal
rs181983734 22 24302480 GSTT1 ENSG00000184674.8 3.071E-6 0 82200 gtex_brain_putamen_basal
RS4822466 22 24312204 GSTT1 ENSG00000184674.8 1.238E-12 0 72476 gtex_brain_putamen_basal
rs1006771 22 24314006 GSTT1 ENSG00000184674.8 3.228E-7 0 70674 gtex_brain_putamen_basal
rs35389228 22 24323131 GSTT1 ENSG00000184674.8 2.824E-7 0 61549 gtex_brain_putamen_basal
rs139012979 22 24323514 GSTT1 ENSG00000184674.8 1.432e-12 0 61166 gtex_brain_putamen_basal
rs365158 22 24323849 GSTT1 ENSG00000184674.8 2.999E-6 0 60831 gtex_brain_putamen_basal
rs436740 22 24323878 GSTT1 ENSG00000184674.8 1.309E-6 0 60802 gtex_brain_putamen_basal
rs140188 22 24324052 GSTT1 ENSG00000184674.8 4.069e-8 0 60628 gtex_brain_putamen_basal
rs149686121 22 24325047 GSTT1 ENSG00000184674.8 5.49E-7 0 59633 gtex_brain_putamen_basal
RS2301423 22 24325062 GSTT1 ENSG00000184674.8 9.096E-7 0 59618 gtex_brain_putamen_basal
rs140220 22 24328021 GSTT1 ENSG00000184674.8 2.785E-8 0 56659 gtex_brain_putamen_basal
rs140221 22 24328163 GSTT1 ENSG00000184674.8 6.335E-11 0 56517 gtex_brain_putamen_basal
rs140240 22 24329435 GSTT1 ENSG00000184674.8 1.566E-6 0 55245 gtex_brain_putamen_basal
RS62232144 22 24331187 GSTT1 ENSG00000184674.8 2.113E-6 0 53493 gtex_brain_putamen_basal
rs2739329 22 24334209 GSTT1 ENSG00000184674.8 1.246E-9 0 50471 gtex_brain_putamen_basal
rs7289655 22 24335228 GSTT1 ENSG00000184674.8 2.496E-9 0 49452 gtex_brain_putamen_basal
RS2739332 22 24335506 GSTT1 ENSG00000184674.8 1.456E-7 0 49174 gtex_brain_putamen_basal
RS2739333 22 24335586 GSTT1 ENSG00000184674.8 1.856E-6 0 49094 gtex_brain_putamen_basal
rs140288 22 24335977 GSTT1 ENSG00000184674.8 1.463E-7 0 48703 gtex_brain_putamen_basal
RS2844004 22 24336531 GSTT1 ENSG00000184674.8 1.488E-7 0 48149 gtex_brain_putamen_basal
RS2262477 22 24338936 GSTT1 ENSG00000184674.8 9.387E-9 0 45744 gtex_brain_putamen_basal
RS192096839 22 24366720 GSTT1 ENSG00000184674.8 2.902E-6 0 17960 gtex_brain_putamen_basal
rs141325606 22 24366728 GSTT1 ENSG00000184674.8 2.96E-6 0 17952 gtex_brain_putamen_basal
rs13054111 22 24366742 GSTT1 ENSG00000184674.8 1.868E-6 0 17938 gtex_brain_putamen_basal
rs72617242 22 24366747 GSTT1 ENSG00000184674.8 1.867E-6 0 17933 gtex_brain_putamen_basal
rs144695194 22 24366820 GSTT1 ENSG00000184674.8 2.843 e-6 0 17860 gtex_brain_putamen_basal
rs114323341 22 24366843 GSTT1 ENSG00000184674.8 2.669E-6 0 17837 gtex_brain_putamen_basal

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

脚注:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

脚注:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
Gene Pearson's Correlation Spearman's Correlation
RBM16 0.95 0.96
SMEK1 0.95 0.96
N4BP1 0.95 0.96
NUP155 0.95 0.95
PDS5A 0.95 0.96
KIAA0947 0.94 0.95
thrap3 0.94 0.96
NPAT 0.94 0.95
KIAA0586 0.94 0.96
NUP153 0.94 0.95
Top 10 negatively co-expressed genes
Gene Pearson's Correlation Spearman's Correlation
AF347015.31 -0.77 -0.86
MT-CO2 -0.77 -0.87
IFI27 -0.76 -0.85
FXYD1 -0.74 -0.84
HIGD1B -0.74 -0.84
AF347015.27 -0.73 -0.83
AF347015.21 -0.73 -0.87
MT-CYB -0.73 -0.82
AF347015.8 -0.73 -0.84
AF347015.33 -0.72 -0.81

Section III. Gene Ontology annotation

Molecular function 去的术语 Evidence Neuro keywords PubMed ID
GO:0004364 glutathione transferase activity IEA -
GO:0004364 glutathione transferase activity TAS 8198545
GO:0016740 transferase activity IEA -
Biological process 去的术语 Evidence Neuro keywords PubMed ID
GO:0006749 glutathione metabolic process IEA -
Cellular component 去的术语 Evidence Neuro keywords PubMed ID
GO:0005737 细胞质 IEA -

Section V. Pathway annotation

Pathway name Pathway size # SZGR 2.0 genes in pathway Info
KEGG GLUTATHIONE METABOLISM 50 34 All SZGR 2.0 genes in this pathway
KEGG METABOLISM OF XENOBIOTICS BY CYTOCHROME P450 70 44 All SZGR 2.0 genes in this pathway
KEGG药物代谢细胞色素P450 72 47 All SZGR 2.0 genes in this pathway
PARENT MTOR SIGNALING UP 567 375 All SZGR 2.0 genes in this pathway
JAEGER METASTASIS DN 258 141 All SZGR 2.0 genes in this pathway
SENESE HDAC3 TARGETS DN 536 332 All SZGR 2.0 genes in this pathway
GOZGIT ESR1 TARGETS DN 781 465 All SZGR 2.0 genes in this pathway
GAUSSMANN MLL AF4 FUSION TARGETS F UP 185 119 All SZGR 2.0 genes in this pathway
SAENZ DETOX PATHWAY AND CARCINOGENESIS DN 13 11 All SZGR 2.0 genes in this pathway
达可STA UV RESPONSE VIA ERCC3 UP 309 199 All SZGR 2.0 genes in this pathway
WANG PROSTATE CANCER ANDROGEN INDEPENDENT 66 37 All SZGR 2.0 genes in this pathway
YAO HOXA10 TARGETS VIA PROGESTERONE UP 79 58 All SZGR 2.0 genes in this pathway
SANSOM APC TARGETS DN 366 238 All SZGR 2.0 genes in this pathway
WESTON VEGFA TARGETS 6HR 59 38 All SZGR 2.0 genes in this pathway
BROWNE HCMV INFECTION 24HR DN 148 102 All SZGR 2.0 genes in this pathway
LINDVALL IMMORTALIZED BY TERT UP 78 48 All SZGR 2.0 genes in this pathway
WESTON VEGFA TARGETS 108 71 All SZGR 2.0 genes in this pathway
DELLA RESPONSE TO TSA AND BUTYRATE 21 17 All SZGR 2.0 genes in this pathway
TSENG IRS1 TARGETS DN 135 88 All SZGR 2.0 genes in this pathway
TSENG ADIPOGENIC POTENTIAL DN 46 28 All SZGR 2.0 genes in this pathway
BURTON ADIPOGENESIS 9 92 59 All SZGR 2.0 genes in this pathway
WESTON VEGFA TARGETS 3HR 74 47 All SZGR 2.0 genes in this pathway
YANG MUC2 TARGETS DUODENUM 3MO DN 23 14 All SZGR 2.0 genes in this pathway
YANG MUC2 TARGETS DUODENUM 6MO DN 21 12 All SZGR 2.0 genes in this pathway
CAMPS COLON CANCER COPY NUMBER DN 74 34 All SZGR 2.0 genes in this pathway
WEST ADRENOCORTICAL TUMOR DN 546 362 All SZGR 2.0 genes in this pathway
SEKI INFLAMMATORY RESPONSE LPS DN 23 16 All SZGR 2.0 genes in this pathway
GOLDRATH ANTIGEN RESPONSE 346 192 All SZGR 2.0 genes in this pathway
AGUIRRE PANCREATIC CANCER COPY NUMBER UP 298 174 All SZGR 2.0 genes in this pathway
AGUIRRE PANCREATIC CANCER COPY NUMBER DN 238 145 All SZGR 2.0 genes in this pathway
SWEET LUNG CANCER KRAS UP 491 316 All SZGR 2.0 genes in this pathway
POOLA INVASIVE BREAST CANCER DN 134 83 All SZGR 2.0 genes in this pathway
KAPOSI LIVER CANCER MET DN 6 5 All SZGR 2.0 genes in this pathway
CAIRO LIVER DEVELOPMENT DN 222 141 All SZGR 2.0 genes in this pathway
MIKKELSEN ES ICP WITH H3K4ME3 718 401 All SZGR 2.0 genes in this pathway
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 15 35 23 All SZGR 2.0 genes in this pathway
BROWNE HCMV INFECTION 1HR DN 222 147 All SZGR 2.0 genes in this pathway
BRUINS UVC RESPONSE VIA TP53 GROUP A 898 516 All SZGR 2.0 genes in this pathway
WANG TNF TARGETS 24 17 All SZGR 2.0 genes in this pathway
LEE BMP2 TARGETS UP 745 475 All SZGR 2.0 genes in this pathway
ZWANG TRANSIENTLY UP BY 2ND EGF PULSE ONLY 1725 838 All SZGR 2.0 genes in this pathway