Gene Page:VN1R4

Summary?
GeneID 317703
Symbol VN1R4
Synonyms V1RL4
Description vomeronasal 1 receptor 4
Reference HGNC:HGNC:19871|Ensembl:ENSG00000228567|HPRD:18287|Vega:OTTHUMG00000182907
Gene type protein-coding
Map location 19q13.42
Pascal p-value 0.166
Fetal beta -0.74
eGene Myers' cis & trans
Support CompositeSet

Gene in Data Sources
Gene set name Method of gene set Description Info
CV:PGCnp Genome-wide Association Study GWAS
认为:Xu_2012 Whole Exome Sequencing analysis 新创4基因的突变identified by exome sequencing of 795 samples in this study

Section I. Genetics and epigenetics annotation

@认为table

Gene Chromosome Position Ref Alt Transcript AA change Mutation type Sift CG46 Trait Study
VN1R4 chr19 53770716 G A NM_173857 p.68A>V missense Schizophrenia 认为:Xu_2012

@eQTL annotation

SNP ID Chromosome Position eGene Gene Entrez ID pvalue qvalue TSS distance eQTL type
rs10994209 chr10 61877705 VN1R4 317703 0.1 trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway name Pathway size # SZGR 2.0 genes in pathway Info
MCCABE BOUND BY HOXC6 469 239 All SZGR 2.0 genes in this pathway