基因Page:HSP90AA1
Summary?
基因 | 3320 |
Symbol | HSP90AA1 |
同义词 | EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp89|Hsp90|LAP-2|LAP2 |
描述 | heat shock protein 90kDa alpha family class A member 1 |
参考 | MIM:140571|HGNC:HGNC:5253|Ensembl:ENSG00000080824|HPRD:00777|Vega:OTTHUMG00000171752 |
基因type | 蛋白质编码 |
Map location | 14Q32.33 |
Pascal P值 | 0.299 |
TADA P值 | 0.002 |
胎儿β | -0.198 |
DMG | 2(#研究) |
Support | RNA AND PROTEIN SYNTHESIS COMPOSITESET |
基因in Data Sources
基因set name | 基因组方法 | 描述 | 信息 |
---|---|---|---|
简历:PGCNP | Genome-wide Association Study | GWAS | |
DMG:Nishioka_2013 | 全基因组DNA甲基化分析 | 作者研究了来自18例第一期精神分裂症(FESZ)和15个正常对照的18例外周血细胞中DNA的甲基化谱。 | 4 |
DMG:Wockner_2014 | 全基因组DNA甲基化分析 | 该数据集包括4641个差异甲基化探针,对应于精神分裂症患者(n = 24)和对照组(n = 24)之间的2929个独特基因。 | 4 |
DNM:Fromer_2014 | 整个外显子组测序分析 | 这项研究报道了WES对623个精神分裂症三重奏的研究,该研究使用基因组DNA报告了DNM。 | |
PMID:cooccur | 高通量文献搜索 | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
文学 | 高通量文献搜索 | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenias | 点击显示详细信息 |
GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 1 | |
Network | Shortest path distance of core genes in the Human protein-protein interaction network | PPI网络中最短路径的贡献:0.4681 |
Section I. Genetics and epigenetics annotation
DNMtable
基因 | Chromosome | Position | 参考 | alt | Transcript | AA更改 | 突变类型 | 筛 | CG46 | Trait | 学习 |
---|---|---|---|---|---|---|---|---|---|---|---|
HSP90AA1 | chr14 | 102550757 | C | CCT | NM_001017963 NM_005348 |
。 。 |
边框 边框 |
Schizophrenia | DNM:Fromer_2014 |
Differentially methylated gene
Probe | Chromosome | Position | Nearest gene | p(dis) | Beta (dis) | fdr(dis) | 学习 |
---|---|---|---|---|---|---|---|
CG13797425 | 14 | 102554977 | HSP90AA1 | 1.5e-7 | 0.741 | 0.004 | DMG:Wockner_2014 |
cg14893857 | 14 | 102554969 | HSP90AA1 | 3.67E-5 | 0.47 | 0.02 | DMG:Wockner_2014 |
cg23289024 | 14 | 102554846 | HSP90AA1 | 5.143E-4 | 0.471 | 0.047 | DMG:Wockner_2014 |
cg04281268 | 14 | 102606293 | HSP90AA1 | -0.02 | 0.96 | DMG:Nishioka_2013 |
第二节。转录组注释
一般基因表达(GTEX)
![Not available](http://www.tjghsg.com/bioinfo/SZGR/GeneImg/HSP90AA1_DE_GTEx.png)
基因expression during devlopment (BrainCloud)
脚注:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
基因expression of temporal and spatial changes (BrainSpan)
脚注:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
Top 10 positively co-expressed genes | ||
基因 | 皮尔逊的相关性 | Spearman's Correlation |
MON1B | 0.90 | 0.93 |
UPF1 | 0.90 | 0.91 |
CLEC16A | 0.90 | 0.91 |
ZFYVE20 | 0.90 | 0.90 |
BICD2 | 0.89 | 0.91 |
POM121 | 0.89 | 0.89 |
DGCR2 | 0.89 | 0.90 |
PCNXL3 | 0.89 | 0.88 |
CLPB | 0.89 | 0.89 |
TULP4 | 0.89 | 0.90 |
前10个负共表达基因 | ||
基因 | 皮尔逊的相关性 | Spearman's Correlation |
AF347015.21 | -0.67 | -0.75 |
C1orf54 | -0.64 | -0.74 |
AF347015.31 | -0.64 | -0.66 |
GNG11 | -0.63 | -0.68 |
MT-CO2 | -0.61 | -0.65 |
SYCP3 | -0.60 | -0.69 |
HIGD1B | -0.60 | -0.63 |
VAMP5 | -0.59 | -0.61 |
AF347015.27 | -0.59 | -0.63 |
IFI27 | -0.58 | -0.58 |
第三节。基因本体论注释
分子功能 | 去学期 | 证据 | 神经关键字 | PubMed ID |
---|---|---|---|---|
去:0000166 | nucleotide binding | TAS | 11470816 | |
GO:0003674 | Molecular_Function | nd | - | |
GO:0030235 | nitric-oxide synthase regulator activity | ISS | - | |
去:0005524 | ATP binding | TAS | 11470816 | |
GO:0051082 | unfolded protein binding | IEA | - | |
GO:0042803 | 蛋白质同构化活性 | TAS | 11470816 | |
去:0030911 | TPR结构域结合 | IDA | 9660753 | |
去:0030911 | TPR结构域结合 | TAS | 12526792 | |
生物过程 | 去学期 | 证据 | 神经关键字 | PubMed ID |
去:0006839 | mitochondrial transport | TAS | 谷氨酸(GO期限:6) | 12526792 |
去:0006457 | protein folding | IEA | - | |
GO:0006986 | response to unfolded protein | NAS | 2527334 | |
去:0007165 | 信号转导 | NAS | 11470816 | |
GO:0008150 | 生物_Process | nd | - | |
去:0042026 | protein refolding | TAS | 9660753 | |
GO:0045429 | positive regulation of nitric oxide biosynthetic process | ISS | - | |
细胞分量 | 去学期 | 证据 | 神经关键字 | PubMed ID |
去:0005829 | cytosol | EXP | 9580552|10781589 | |
去:0005829 | cytosol | NAS | 12526792 | |
去:0005575 | cellular_component | nd | - | |
去:0005737 | 细胞质 | IEA | - | |
GO:0042470 | melanosome | IEA | - |
Section IV. Protein-protein interaction annotation
Interactors | Aliases B | Official full name B | 实验 | 资源 | PubMed ID |
---|---|---|---|---|---|
AHR | - | 芳基碳氢化合物受体 | - | HPRD,BioGRID | 7961671|9083006 |
AHSA1 | AHA1 | C14orf3 | p38 | AHA1,热冲击激活剂90KDA蛋白ATPase同源1(酵母) | 体外 体内 Two-hybrid |
Biogrid | 12504007 |
AHSA1 | AHA1 | C14orf3 | p38 | AHA1,热冲击激活剂90KDA蛋白ATPase同源1(酵母) | - | HPRD | 12604615 |
AHSA2 | DKFZP564C236 |FLJ34679 |FLJ41715 |HCH1 | AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) | - | HPRD,BioGRID | 12504007|14739935 |
AIP | arA9 | FKBP16 | FKBP37 | SMTPHN | XAP2 | 芳基烃受体相互作用蛋白 | - | HPRD | 9111057|9837941 |
AIP | arA9 | FKBP16 | FKBP37 | SMTPHN | XAP2 | 芳基烃受体相互作用蛋白 | 亲和力捕获 - 韦斯特恩 | Biogrid | 11013261 |
AKT1 | AKT | MGC99656 | PKB | PKB-ALPHA | PRKBA | RAC | RAC-ALPHA | V-Akt鼠胸腺瘤病毒癌基因同源1 | - | HPRD,BioGRID | 10995457 |
Akt2 | PKBB | PKBBETA | PRKBB | RAC-BETA | V-Akt鼠胸腺瘤病毒癌基因同源2 | - | HPRD | 11988487 |
ALK | CD246 | Ki-1 | TFG/ALK | anaplastic lymphoma receptor tyrosine kinase | - | HPRD | 11888936 |
APAF1 | CED4 | DKFZp781B1145 | apoptotic peptidase activating factor 1 | 亲和力捕获 - 韦斯特恩 | Biogrid | 10934467 |
APOB | FLDB | apolipoprotein B (including Ag(x) antigen) | - | HPRD | 11333259 |
ar | AIS | DHTR | HUMARA | KD | NR3C4 | SBMA | SMAX1 | TFM | 雄激素受体 | - | HPRD,BioGRID | 1525041 |
arnt | HIF-1beta | HIF1B | HIF1BETA | TANGO | bHLHe2 | 芳基碳氢化合物受体nuclear translocator | 亲和力捕获 - 韦斯特恩 | Biogrid | 11013261 |
arntl | BMAL1 |bmal1c |JAP3 |MGC47515 |mop3 |pasd3 |抽动|Bhlhe5 | 芳基碳氢化合物受体核转运剂样 | - | HPRD,BioGRID | 9079689 |
ASGR1 | ASGPR | CLEC4H1 | Hs.12056 | Asialogoprotein受体1 | - | HPRD | 12167617 |
BAG4 | Bag-4 |SODD | BCL2-associated athanogene 4 | 亲和力捕获 - 韦斯特恩 | Biogrid | 14559896 |
Birc5 | API4 |EPR-1 | 细菌病毒IAP重复含量5 | Survivin interacts with Hsp90. | BIND | 15894266 |
CALM1 | CALML2 | CAMI | DD132 | PHKD | calmodulin 1 (phosphorylase kinase, delta) | - | HPRD | 8486648 |
CDC37 | P50CDC37 | cell division cycle 37 homolog (S. cerevisiae) | 共晶结构 体外 |
Biogrid | 9685350|14718169 |
CDC37 | P50CDC37 | cell division cycle 37 homolog (S. cerevisiae) | - | HPRD | 9685350|14718169 |
CHTF18 | C16orf41 | C321D2.2 | C321D2.3 | C321D2.4 | CHL12 | Ctf18 | RUVBL | CTF18,染色体传播保真度因子18同源物(S. cerevisiae) | Affinity Capture-MS | Biogrid | 12930902 |
CHUK | IKBKA | IKK-alpha | IKK1 | IKKA | NFKBIKA | TCF16 | 保守的螺旋环螺旋无处不在激酶 | - | HPRD | 11864612 |
CSNK2A1 | CK2A1 | CKII | 酪蛋白激酶2,α1多肽 | - | HPRD,BioGRID | 7794926 |
CSNK2A2 | CK2A2 | CSNK2A1 | FLJ43934 | casein kinase 2, alpha prime polypeptide | - | HPRD,BioGRID | 7794926 |
CUL4A | - | cullin 4A | Affinity Capture-MS | Biogrid | 12481031 |
DAP3 | DAP-3 |DKFZP686G12159 |MGC126058 |MGC126059 |MRP-S29 |MRPS29 |BMRP-10 | 死亡相关蛋白3 | - | HPRD,BioGRID | 10903152 |
egfr | ERBB | ERBB1 | HER1 | PIG61 | mENA | 表皮生长因子受体(红细胞性白血病病毒(V-ERB-B)癌基因同源物,鸟类) | EGFR与HSP90相互作用。这种相互作用是基于未指定物种与人类HSP90的EGFR之间的相互作用进行建模的。 | BIND | 12471035 |
EIF2AK2 | EIF2AK1 | MGC126524 | PKR | PRKR | eukaryotic translation initiation factor 2-alpha kinase 2 | - | HPRD,BioGRID | 11447118 |
EIF2AK3 | DKFZP781H1925 |hri |佩克|PERK |WRS | eukaryotic translation initiation factor 2-alpha kinase 3 | - | HPRD,BioGRID | 12446770 |
EPRS | DKFZp313B047 | EARS | GLUPRORS | PARS | PIG32 | QARS | QPRS | 谷氨酰基 - 丙酰基-TRNA合成酶 | - | HPRD,BioGRID | 10913161 |
ERBB2 | CD340 |her-2 |her-2/neu |her2 |neu |ngl |TKR1 | V-ERB-B2红细胞白血病病毒性癌基因同源2,神经/胶质母细胞瘤衍生的癌基因同源物(Avian) | ERBB2interacts with HSP90. This interaction was modelled on a demonstrated interaction between human ERBB2 and monkey HSP90. | BIND | 15643424 |
ERBB2 | CD340 |her-2 |her-2/neu |her2 |neu |ngl |TKR1 | V-ERB-B2红细胞白血病病毒性癌基因同源2,神经/胶质母细胞瘤衍生的癌基因同源物(Avian) | - | HPRD,BioGRID | 11071886 |
ERN1 | FLJ30999 |IRE1 |IRE1P |MGC163277 |MGC163279 | 内质网向原子核信号传导1 | - | HPRD,BioGRID | 12446770 |
ESR1 | DKFZP686N23123 |er |ESR |Esra |时代|NR3A1 | 雌激素受体1 | - | HPRD,BioGRID | 11911945 |
FANCA | FA | FA-H | FA1 | FAA | FACA | FAH | FANCH | MGC75158 | Fanconi anemia, complementation group A | Two-hybrid | Biogrid | 14499622 |
FANCC | FA3 | FAC | FACC | FLJ14675 | Fanconi anemia, complementation group C | Two-hybrid | Biogrid | 14499622 |
费斯 | FPS | 猫石棺ma oncogene | 重构的复合物 | Biogrid | 9222609 |
FKBP5 | FKBP51 |FKBP54 |MGC111006 |p54 |PPIASE |PTG-10 | FK506结合蛋白5 | - | HPRD,BioGRID | 9001212|12538866 |
FNIP1 | DKFZP686E18167 |DKFZP781P0215 |KIAA1961 |MGC667 | folliculin interacting protein 1 | Affinity Capture-MS | Biogrid | 17028174 |
GNA12 | MGC104623 | MGC99644 | NNX3 | RMP | gep | 鸟嘌呤核苷酸结合蛋白(G蛋白)α12 | 体外 体内 Two-hybrid |
Biogrid | 11598136|12117999 |
GNA12 | MGC104623 | MGC99644 | NNX3 | RMP | gep | 鸟嘌呤核苷酸结合蛋白(G蛋白)α12 | - | HPRD | 11598136 | 12117999 |
gucy1b3 | GC-S-BETA-1 |GC-SB3 |Guc1b3 |Gucb3 |GUCSB3 |gucy1b1 | 鸟苷酸环化酶1,可溶性,β3 | - | HPRD,BioGRID | 12676772 |
HCFC1 | CFF |HCF-1 |HCF1 |HFC1 |MGC70925 |VCAF | 宿主细胞因子C1(VP16-辅助蛋白) | Affinity Capture-MS | Biogrid | 12670868 |
HIF1A | HIF-1alpha | HIF1 | HIF1-ALPHA | MOP1 | PASD8 | hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | - | HPRD,BioGRID | 9079689 |
HSF1 | HSTF1 | heat shock transcription factor 1 | 亲和力捕获 - 韦斯特恩 重构的复合物 |
Biogrid | 9222609|12621024 |
HSP90AA1 | FLJ31884 | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP2 | 热休克蛋白90KDAα(胞质),A类成员1 | Two-hybrid | Biogrid | 16169070 |
HSPA1A | FLJ54303 |FLJ54370 |FLJ54392 |FLJ54408 |FLJ75127 |HSP70-1 |HSP70-1A |HSP70I |HSP72 |HSPA1 | HSPA1B | heat shock 70kDa protein 1A | 重构的复合物 | Biogrid | 12093808 |
HSPA8 | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP1 | MGC131511 | MGC29929 | NIP71 | heat shock 70kDa protein 8 | - | HPRD,BioGRID | 9269769 |
ikbkb | FLJ40509 |ikk-beta |ikk2 |ikkb |MGC131801 |nfkbikb | inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta | - | HPRD | 11864612 |
ikbkg | AMCBX1 |FIP-3 |fip3 |fip3p |ikk-gamma |IP |IP1 |IP2 |IPD2 |Nemo | B细胞,激酶γ中Kappa光多肽基因增强子的抑制剂 | - | HPRD | 11864612 |
IRS4 | IRS-4 | PY160 | 胰岛素受体底物4 | Affinity Capture-MS | Biogrid | 11912194 |
LSM1 | CASM | YJL124C | LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) | - | HPRD,BioGRID | 15231747 |
MAP3K7 | TAK1 | TGF1a | 有丝分裂原激活的蛋白激酶激酶激酶7 | - | HPRD | 14743216 |
MAP3K7IP2 | FLJ21885 | KIAA0733 | TAB2 | 有丝分裂原激活的蛋白激酶激酶激酶7相互作用蛋白2 | - | HPRD | 14743216 |
MAPK1 | ERK | ERK2 | ERT1 | MAPK2 | P42MAPK | PRKM1 | PRKM2 | p38 | p40 | p41 | p41mapk | 有丝分裂原激活的蛋白激酶1 | - | HPRD | 11748628 |
MYC | Bhlhe39 |c-myc | v-myc myelocytomatosis viral oncogene homolog (avian) | - | HPRD,BioGRID | 12644583 |
MYOD1 | MYF3 | MYOD | PUM | bHLHc1 | myogenic differentiation 1 | - | HPRD,BioGRID | 1406681 |
NOS3 | ecnos |eNOS | 一氧化氮合酶3(内皮细胞) | - | HPRD,BioGRID | 11744239|12124224 |
NPAS2 | FLJ23138 | MGC71151 | MOP4 | PASD4 | bHLHe9 | 神经元PAS结构蛋白2 | 重构的复合物 | Biogrid | 9079689 |
NR3C1 | GCCR |GCR |gr |grl | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | - | HPRD,BioGRID | 8621522|8645634 |8898375|9334248 |10066374 |
NR3C2 | MCR | MGC133092 | MLR | MR | nuclear receptor subfamily 3, group C, member 2 | - | HPRD | 9392437 |
PDPK1 | MGC20087 |MGC35290 |PDK1 |Pro0461 | 3-phosphoinositide dependent protein kinase-1 | - | HPRD | 11779851 |
PIM1 | PIM | pim-1 oncogene | - | HPRD,BioGRID | 11237709 |
PPARA | MGC2237 |MGC2452 |NR1C1 |PPAR |hppar | peroxisome proliferator-activated receptor alpha | - | HPRD,BioGRID | 12482853 |
PPID | CYP-40 |CYPD |MGC33096 | peptidylprolyl isomerase D | - | HPRD | 12145316 |
PPP5C | FLJ36922 |pp5 |PPP5 | protein phosphatase 5, catalytic subunit | - | HPRD | 10400612 |
PPP5C | FLJ36922 |pp5 |PPP5 | protein phosphatase 5, catalytic subunit | HSP90与PP5相互作用。这种相互作用是基于未指定物种的人类HSP90和PP5之间的相互作用进行建模的。 | BIND | 15664193 |
ptges3 | P23 | TEBP | cPGES | 前列腺素E合酶3(胞质) | - | HPRD,BioGRID | 11812147|12077419 |
RAF1 | 克拉夫|NS5 |RAF-1 |C-Raf | V-RAF-1鼠白血病病毒癌基因同源1 | RAF-1与HSP90相互作用。这种相互作用是建立在人RAF-1和猴子HSP90之间的相互作用上的模型。 | BIND | 15618521 |
RAF1 | 克拉夫|NS5 |RAF-1 |C-Raf | V-RAF-1鼠白血病病毒癌基因同源1 | - | HPRD,BioGRID | 8408024 |
ralbp1 | RIP1 | RLIP1 | RLIP76 | rala结合蛋白1 | 亲和力捕获 - 韦斯特恩 | Biogrid | 12621024 |
RIPK1 | FLJ39204 | RIP | RIP1 | 受体(TNFRSF) - 互动丝氨酸 - 硫代激酶1 | - | HPRD | 10744744 |
RPS3A | FTE1 | MFTL | MGC23240 | 核糖体蛋白S3A | Two-hybrid | Biogrid | 16169070 |
RUNX1T1 | AML1T1 | CBFA2T1 | CDR | ETO | MGC2796 | MTG8 | MTG8b | ZMYND2 | 与RUNT相关的转录因子1;易位为1(Cyclin D相关) | - | HPRD | 10076566 |
sgta | SGT | alphaSGT | hSGT | small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha | - | HPRD,BioGRID | 12482202 |
SIM1 | BHLHE14 | single-minded homolog 1 (Drosophila) | 重构的复合物 | Biogrid | 9020169 |
smyd3 | FLJ21080 |MGC104324 |zmynd1 |Znfn3A1 |BA74P14.1 | 设置和mynd域包含3 | smyd3interacts with HSP90A. | BIND | 15235609 |
smyd3 | FLJ21080 |MGC104324 |zmynd1 |Znfn3A1 |BA74P14.1 | 设置和mynd域包含3 | - | HPRD,BioGRID | 15235609 |
src | ASV |src1 |C-SRC |P60-SRC | V-SRC肉瘤(Schmidt-Ruppin A-2)病毒癌基因同源物(Avian) | - | HPRD,BioGRID | 1310678 |
STARD13 | DLC2 |FLJ37385 |GT650 | StAR-related lipid transfer (START) domain containing 13 | Two-hybrid | Biogrid | 14697242 |
Stat3 | APRF |FLJ20882 |hies |MGC16063 | 转录3的信号换能器和激活因子(急性相反应因子) | - | HPRD,BioGRID | 12559950 |
STIP1 | HOP | IEF-SSP-3521 | P60 | STI1 | STI1L | stress-induced-phosphoprotein 1 | - | HPRD,BioGRID | 10786835 |
STK11 | lkb1 |PJS | serine/threonine kinase 11 | 亲和力捕获 - 韦斯特恩 重构的复合物 |
Biogrid | 12489981 |
Stub1 | 芯片|hspabp2 |NY-CO-7 |sdccag7 |Ubox1 | STIP1 homology and U-box containing protein 1 | - | HPRD | 1155 | 111466327750 |
TERT | EST2 |TCS1 |TP2 |trt |hest2 | telomerase reverse transcriptase | - | HPRD,BioGRID | 12586360 |
tnfrsf1a | CD120a | FPF | MGC19588 | TBP1 | TNF-R | TNF-R-I | TNF-R55 | TNFAR | TNFR1 | TNFR55 | TNFR60 | p55 | p55-R | p60 | 肿瘤坏死因子受体超家族,成员1a | - | HPRD | 7876093 |
Tomm34 | htom34p |tom34 |URCC3 | translocase of outer mitochondrial membrane 34 | - | HPRD | 9660753 |
Tomm70a | FLJ90470 | translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) | - | HPRD | 12526792 |
TP53 | FLJ92943 | LFS1 | TRP53 | p53 | tumor protein p53 | - | HPRD,BioGRID | 11507088|12427754 |
TRADD | Hs.89862 | MGC11078 | 通过死亡域与TNFRSF1A相关 | - | HPRD | 14743216 |
tuba1a | B-ALPHA-1 | FLJ25113 | LIS3 | TUBA3 | tubulin, alpha 1a | 亲和力捕获 - 韦斯特恩 | Biogrid | 12621024 |
WASL | DKFZP779G0847 |MGC48327 |n-wasp |nwasp | Wiskott-Aldrich syndrome-like | WASL (N-WASP) interacts with HSPCA (HSP90-alpha). | BIND | 15791211 |
Section V. Pathway annotation
Pathway name | 路径大小 | #szgr 2.0基因 | 信息 |
---|---|---|---|
KEGG抗原处理和演示 | 89 | 65 | All SZGR 2.0 genes in this pathway |
KEGG NOD LIKE RECEPTOR SIGNALING PATHWAY | 62 | 47 | All SZGR 2.0 genes in this pathway |
KEGG孕酮介导的卵母细胞成熟 | 86 | 59 | All SZGR 2.0 genes in this pathway |
KEGG PATHWAYS IN CANCER | 328 | 259 | All SZGR 2.0 genes in this pathway |
KEGG前列腺癌 | 89 | 75 | All SZGR 2.0 genes in this pathway |
Biocarta No1途径 | 33 | 24 | All SZGR 2.0 genes in this pathway |
BIOCARTA AKT PATHWAY | 22 | 16 | All SZGR 2.0 genes in this pathway |
Biocarta GCR途径 | 22 | 17 | All SZGR 2.0 genes in this pathway |
Biocarta P53Hypoxia途径 | 23 | 21 | All SZGR 2.0 genes in this pathway |
BIOCARTA HIF PATHWAY | 15 | 12 | All SZGR 2.0 genes in this pathway |
Biocarta PPARA途径 | 58 | 43 | All SZGR 2.0 genes in this pathway |
BIOCARTA TEL PATHWAY | 18 | 15 | All SZGR 2.0 genes in this pathway |
PID HDAC CLASSII PATHWAY | 34 | 27 | All SZGR 2.0 genes in this pathway |
PID MYC ACTIV PATHWAY | 79 | 62 | All SZGR 2.0 genes in this pathway |
PID ILK PATHWAY | 45 | 32 | All SZGR 2.0 genes in this pathway |
PID LKB1途径 | 47 | 37 | All SZGR 2.0 genes in this pathway |
PID端粒酶途径 | 68 | 48 | All SZGR 2.0 genes in this pathway |
PID REG GR PATHWAY | 82 | 60 | All SZGR 2.0 genes in this pathway |
PID PI3KCI PATHWAY | 49 | 40 | All SZGR 2.0 genes in this pathway |
PID IL2 PI3K PATHWAY | 34 | 27 | All SZGR 2.0 genes in this pathway |
PID AR TF PATHWAY | 53 | 38 | All SZGR 2.0 genes in this pathway |
PID AVB3 INTEGRIN PATHWAY | 75 | 53 | All SZGR 2.0 genes in this pathway |
PID HIF1A途径 | 19 | 12 | All SZGR 2.0 genes in this pathway |
PID ERBB网络途径 | 15 | 13 | All SZGR 2.0 genes in this pathway |
PID VEGFR1途径 | 26 | 23 | All SZGR 2.0 genes in this pathway |
PID VEGFR1 2途径 | 69 | 57 | All SZGR 2.0 genes in this pathway |
PID PI3KCI AKT PATHWAY | 35 | 30 | All SZGR 2.0 genes in this pathway |
REACTOME DEVELOPMENTAL BIOLOGY | 396 | 292 | All SZGR 2.0 genes in this pathway |
REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION | 13 | 9 | All SZGR 2.0 genes in this pathway |
REACTOME CELL CYCLE | 421 | 253 | All SZGR 2.0 genes in this pathway |
REACTOME SIGNALING BY ERBB2 | 101 | 78 | All SZGR 2.0 genes in this pathway |
组成性活性EGFR的反应组信号传导 | 18 | 13 | All SZGR 2.0 genes in this pathway |
EGFR在癌症中的反应组信号传导 | 109 | 80 | All SZGR 2.0 genes in this pathway |
REACTOME ENOS ACTIVATION AND REGULATION | 20 | 14 | All SZGR 2.0 genes in this pathway |
Reactome细胞周期有丝分裂 | 325 | 185 | All SZGR 2.0 genes in this pathway |
REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES | 66 | 43 | All SZGR 2.0 genes in this pathway |
来自有丝分裂中心体NLP的反应组损失 | 59 | 38 | All SZGR 2.0 genes in this pathway |
REACTOME AXON GUIDANCE | 251 | 188 | All SZGR 2.0 genes in this pathway |
REACTOME SEMA3A PAK DEPENDENT AXON REPULSION | 15 | 14 | All SZGR 2.0 genes in this pathway |
REACTOME SEMAPHORIN INTERACTIONS | 68 | 53 | All SZGR 2.0 genes in this pathway |
REACTOME MITOTIC G2 G2 M PHASES | 81 | 50 | All SZGR 2.0 genes in this pathway |
REACTOME INFLUENZA LIFE CYCLE | 203 | 72 | All SZGR 2.0 genes in this pathway |
REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION | 169 | 47 | All SZGR 2.0 genes in this pathway |
中村肿瘤区周围与中央 | 285 | 181 | All SZGR 2.0 genes in this pathway |
SENGUPTA NASOPHARYNGEAL CARCINOMA WITH LMP1 UP | 408 | 247 | All SZGR 2.0 genes in this pathway |
CHANDRAN METASTASIS TOP50 UP | 38 | 27 | All SZGR 2.0 genes in this pathway |
CASORELLI ACUTE PROMYELOCYTIC LEUKEMIA DN | 663 | 425 | All SZGR 2.0 genes in this pathway |
HORIUCHI WTAP TARGETS DN | 310 | 188 | All SZGR 2.0 genes in this pathway |
OSMAN BLADDER CANCER UP | 404 | 246 | All SZGR 2.0 genes in this pathway |
GINESTIER BREAST CANCER 20Q13 AMPLIFICATION UP | 119 | 66 | All SZGR 2.0 genes in this pathway |
Mullighan NPM1突变签名1向上 | 276 | 165 | All SZGR 2.0 genes in this pathway |
MULLIGHAN NPM1 MUTATED SIGNATURE 2 UP | 139 | 83 | All SZGR 2.0 genes in this pathway |
Mullighan NPM1签名3 | 341 | 197 | All SZGR 2.0 genes in this pathway |
Dittmer PTHLH靶向DN | 73 | 51 | All SZGR 2.0 genes in this pathway |
KINSEY TARGETS OF EWSR1 FLII FUSION UP | 1278 | 748 | All SZGR 2.0 genes in this pathway |
Kim WT1靶向8小时 | 164 | 122 | All SZGR 2.0 genes in this pathway |
Bidus转移 | 214 | 134 | All SZGR 2.0 genes in this pathway |
Wamunyokoli卵巢癌LMP | 265 | 158 | All SZGR 2.0 genes in this pathway |
RODRIGUES THYROID CARCINOMA ANAPLASTIC UP | 722 | 443 | All SZGR 2.0 genes in this pathway |
KOKKINAKIS METHIONINE DEPRIVATION 48HR UP | 128 | 95 | All SZGR 2.0 genes in this pathway |
KOKKINAKIS METHIONINE DEPRIVATION 96HR DN | 75 | 50 | All SZGR 2.0 genes in this pathway |
berenjeno由Rhoa Up Troment | 536 | 340 | All SZGR 2.0 genes in this pathway |
MARKS ACETYLATED NON HISTONE PROTEINS | 15 | 9 | All SZGR 2.0 genes in this pathway |
MET的Seiden肿瘤发生 | 88 | 53 | All SZGR 2.0 genes in this pathway |
SCHEIDEREIT IKK INTERACTING PROTEINS | 58 | 45 | All SZGR 2.0 genes in this pathway |
PUJANA BRCA1 PCC网络 | 1652 | 1023 | All SZGR 2.0 genes in this pathway |
PUJANA CHEK2 PCC网络 | 779 | 480 | All SZGR 2.0 genes in this pathway |
buytaert光动力疗法压力 | 811 | 508 | All SZGR 2.0 genes in this pathway |
BENPORATH MYC TARGETS WITH EBOX | 230 | 156 | All SZGR 2.0 genes in this pathway |
COLLIS PRKDC SUBSTRATES | 20 | 15 | All SZGR 2.0 genes in this pathway |
Menssen MYC目标 | 53 | 35 | All SZGR 2.0 genes in this pathway |
PENG LEUCINE DEPRIVATION DN | 187 | 122 | All SZGR 2.0 genes in this pathway |
UEDA PERIFERAL CHICK | 169 | 111 | All SZGR 2.0 genes in this pathway |
POMEROY MEDULLOBLASTOMA DESMOPLASIC VS CLASSIC UP | 62 | 38 | All SZGR 2.0 genes in this pathway |
BYSTRYKH HEMATOPOIESIS STEM CELL QTL TRANS | 882 | 572 | All SZGR 2.0 genes in this pathway |
SHIPP DLBCL VS FOLLICULAR LYMPHOMA UP | 45 | 30 | All SZGR 2.0 genes in this pathway |
彭雷帕霉素反应dn | 245 | 154 | All SZGR 2.0 genes in this pathway |
PENG GLUTAMINE DEPRIVATION DN | 337 | 230 | All SZGR 2.0 genes in this pathway |
松本自然杀手差分 | 475 | 313 | All SZGR 2.0 genes in this pathway |
IGLESIAS E2F TARGETS UP | 151 | 103 | All SZGR 2.0 genes in this pathway |
BLALOCK ALZHEIMERS DISEASE DN | 1237 | 837 | All SZGR 2.0 genes in this pathway |
CUI TCF21目标2 DN | 830 | 547 | All SZGR 2.0 genes in this pathway |
BLALOCK ALZHEIMERS DISEASE UP | 1691年 | 1088 | All SZGR 2.0 genes in this pathway |
APRELIKOVA BRCA1 TARGETS | 49 | 33 | All SZGR 2.0 genes in this pathway |
Yamazaki TCEB3靶向DN | 215 | 132 | All SZGR 2.0 genes in this pathway |
张增殖与静止 | 51 | 41 | All SZGR 2.0 genes in this pathway |
BLALOCK ALZHEIMERS DISEASE INCIPIENT DN | 165 | 106 | All SZGR 2.0 genes in this pathway |
SESTO RESPONSE TO UV C1 | 72 | 45 | All SZGR 2.0 genes in this pathway |
WENG POR TARGETS GLOBAL DN | 23 | 14 | All SZGR 2.0 genes in this pathway |
tseng irs1靶向 | 113 | 71 | All SZGR 2.0 genes in this pathway |
BAELDE DIABETIC NEPHROPATHY DN | 434 | 302 | All SZGR 2.0 genes in this pathway |
CHENG RESPONSE TO NICKEL ACETATE | 45 | 29 | All SZGR 2.0 genes in this pathway |
Weng Por靶向肝脏DN | 20 | 11 | All SZGR 2.0 genes in this pathway |
KRIGE RESPONSE TO TOSEDOSTAT 6HR DN | 911 | 527 | All SZGR 2.0 genes in this pathway |
Krige对Tosedostat 24小时DN的反应 | 1011 | 592 | All SZGR 2.0 genes in this pathway |
Creighton内分泌疗法抗性2 | 473 | 224 | All SZGR 2.0 genes in this pathway |
Bhati G2M被2methoxyestradiol逮捕 | 125 | 68 | All SZGR 2.0 genes in this pathway |
Mirlet7a3 DN的Brueckner目标 | 78 | 49 | All SZGR 2.0 genes in this pathway |
对Salirasib dn的Blum响应 | 342 | 220 | All SZGR 2.0 genes in this pathway |
WANG TUMOR INVASIVENESS UP | 374 | 247 | All SZGR 2.0 genes in this pathway |
GRESHOCK CANCER COPY NUMBER UP | 323 | 240 | All SZGR 2.0 genes in this pathway |
CHAUHAN RESPONSE TO METHOXYESTRADIOL UP | 51 | 32 | All SZGR 2.0 genes in this pathway |
骨髓瘤与成熟B淋巴细胞中的Shaffer IRF4靶标 | 101 | 76 | All SZGR 2.0 genes in this pathway |
Hsiao家政基因 | 389 | 245 | All SZGR 2.0 genes in this pathway |
SAKAI CHRONIC HEPATITIS VS LIVER CANCER UP | 83 | 63 | All SZGR 2.0 genes in this pathway |
Kim所有疾病Calb1 Corr Up | 548 | 370 | All SZGR 2.0 genes in this pathway |
WANG RESPONSE TO GSK3 INHIBITOR SB216763 DN | 374 | 217 | All SZGR 2.0 genes in this pathway |
LEE BMP2 TARGETS DN | 882 | 538 | All SZGR 2.0 genes in this pathway |
GUO TARGETS OF IRS1 AND IRS2 | 98 | 67 | All SZGR 2.0 genes in this pathway |
FU INTERACT WITH ALKBH8 | 13 | 8 | All SZGR 2.0 genes in this pathway |
Section VI. microRNA annotation
miRNA family | 目标位置 | mirna id | mirna seq | ||
---|---|---|---|---|---|
UTR开始 | UTR结束 | 匹配方法 | |||
miR-361 | 46 | 53 | 1A,m8 | HSA-MIR-361脑 | uuaucagaaucuccagggguac |
mir-495 | 82 | 88 | 1A | hsa-miR-495脑 | AAACAAACAUGGUGCACUUCUUU |