Gene Page:KRT35
Summary?
| GeneID | 3886 |
| Symbol | KRT35 |
| Synonyms | HA5|Ha-5|KRTHA5|hHa5 |
| Description | keratin 35 |
| Reference | MIM:602764|HGNC:HGNC:6453|Ensembl:ENSG00000197079|HPRD:04138|Vega:OTTHUMG00000133425 |
| Gene type | protein-coding |
| Map location | 17q21.2 |
| Pascal p-value | 0.437 |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:GWASdb | Genome-wide Association Studies | GWASdb records for schizophrenia | |
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| GIGYF1 | 0.82 | 0.82 |
| LRCH4 | 0.82 | 0.87 |
| CTB-161A2.2 | 0.81 | 0.81 |
| NBEAL2 | 0.81 | 0.87 |
| MAMDC4 | 0.81 | 0.83 |
| TNFRSF25 | 0.80 | 0.80 |
| RP11-274B21.1 | 0.79 | 0.76 |
| HDAC7 | 0.79 | 0.78 |
| AC135050.2 | 0.79 | 0.75 |
| AC004410.1 | 0.79 | 0.82 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| GMFG | -0.45 | -0.57 |
| LYRM5 | -0.44 | -0.55 |
| B2M | -0.44 | -0.43 |
| NDUFB5 | -0.43 | -0.55 |
| CHPT1 | -0.43 | -0.49 |
| ACOT13 | -0.43 | -0.46 |
| FAM162A | -0.43 | -0.42 |
| GNG11 | -0.42 | -0.52 |
| RERGL | -0.42 | -0.51 |
| LY96 | -0.42 | -0.57 |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| ODONNELL TFRC TARGETS DN | 139 | 76 | All SZGR 2.0 genes in this pathway |
| TANAKA METHYLATED IN ESOPHAGEAL CARCINOMA | 103 | 58 | All SZGR 2.0 genes in this pathway |
| MARTINEZ RB1 TARGETS DN | 543 | 317 | All SZGR 2.0 genes in this pathway |
| MARTINEZ TP53 TARGETS DN | 593 | 372 | All SZGR 2.0 genes in this pathway |
| MARTINEZ RB1 AND TP53 TARGETS DN | 591 | 366 | All SZGR 2.0 genes in this pathway |
| CAMPS COLON CANCER COPY NUMBER UP | 92 | 45 | All SZGR 2.0 genes in this pathway |
| LABBE TGFB1 TARGETS DN | 108 | 64 | All SZGR 2.0 genes in this pathway |
| MARTENS TRETINOIN RESPONSE UP | 857 | 456 | All SZGR 2.0 genes in this pathway |
| WANG TNF TARGETS | 24 | 17 | All SZGR 2.0 genes in this pathway |
| PURBEY CTBP1的目标SATB1 UP | 344 | 215 | All SZGR 2.0 genes in this pathway |
| ZWANG TRANSIENTLY UP BY 1ST EGF PULSE ONLY | 1839 | 928 | All SZGR 2.0 genes in this pathway |