Gene Page:ZNF83

Summary?
GeneID 55769
Symbol ZNF83
Synonyms HPF1|ZNF816B
Description zinc finger protein 83
Reference MIM:194558|HGNC:HGNC:13158|Ensembl:ENSG00000167766|HPRD:01935|Vega:OTTHUMG00000182761
Gene type protein-coding
Map location 19q13.3
Pascal p-value 0.774
Sherlock p-value 0.418
DMG 1 (# studies)
eGene Anterior cingulate cortex BA24
Caudate basal ganglia
Cerebellum
Cortex
Hippocampus
元

Gene in Data Sources
Gene set name Method of gene set Description Info
CV:PGCnp Genome-wide Association Study GWAS
DMG:Wockner_2014 Genome-wide DNA methylation analysis This dataset includes 4641 differentially methylated probes corresponding to 2929 unique genes between schizophrenia patients (n=24) and controls (n=24). 1

Section I. Genetics and epigenetics annotation

@Differentially methylated gene

Probe Chromosome Position Nearest gene P (dis) Beta (dis) FDR (dis) Study
cg04386405 19 53141394 ZNF83 1.61E-5 -0.319 0.015 DMG:Wockner_2014

@eQTL annotation

SNP ID Chromosome Position eGene Gene Entrez ID pvalue qvalue TSS distance eQTL type
rs11668015 19 53115233 ZNF83 ENSG00000167766.14 2.782E-9 0 78516 gtex_brain_ba24
rs1046679 19 53115842 ZNF83 ENSG00000167766.14 2.473E-9 0 77907 gtex_brain_ba24
rs1046648 19 53116060 ZNF83 ENSG00000167766.14 7.452E-8 0 77689 gtex_brain_ba24
rs7257138 19 53119029 ZNF83 ENSG00000167766.14 4.879E-7 0 74720 gtex_brain_ba24
rs7256557 19 53119166 ZNF83 ENSG00000167766.14 2.099E-7 0 74583 gtex_brain_ba24
rs10421152 19 53119808 ZNF83 ENSG00000167766.14 9.667E-7 0 73941 gtex_brain_ba24
rs62118479 19 53119965 ZNF83 ENSG00000167766.14 4.537E-7 0 73784 gtex_brain_ba24
rs67949199 19 53121502 ZNF83 ENSG00000167766.14 4.879E-7 0 72247 gtex_brain_ba24
rs62118480 19 53121569 ZNF83 ENSG00000167766.14 4.879E-7 0 72180 gtex_brain_ba24
rs73582288 19 53121736 ZNF83 ENSG00000167766.14 4.814E-7 0 72013 gtex_brain_ba24
rs113063121 19 53121757 ZNF83 ENSG00000167766.14 4.949E-7 0 71992 gtex_brain_ba24
rs112485438 19 53121838 ZNF83 ENSG00000167766.14 4.957E-7 0 71911 gtex_brain_ba24
rs67710655 19 53121851 ZNF83 ENSG00000167766.14 4.921E-7 0 71898 gtex_brain_ba24

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
死神:胎儿(13 - 26 postconception一周s), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway name Pathway size # SZGR 2.0 genes in pathway Info
TURASHVILI BREAST DUCTAL CARCINOMA VS DUCTAL NORMAL DN 198 110 All SZGR 2.0 genes in this pathway
HAMAI APOPTOSIS VIA TRAIL UP 584 356 All SZGR 2.0 genes in this pathway
PEREZ TP53 TARGETS 1174 695 All SZGR 2.0 genes in this pathway
KIM MYC AMPLIFICATION TARGETS DN 97 51 All SZGR 2.0 genes in this pathway
BUYTAERT PHOTODYNAMIC THERAPY STRESS UP 811 508 All SZGR 2.0 genes in this pathway
BLALOCK ALZHEIMERS DISEASE INCIPIENT UP 390 242 All SZGR 2.0 genes in this pathway
BLALOCK ALZHEIMERS DISEASE UP 1691 1088 All SZGR 2.0 genes in this pathway
ACEVEDO LIVER CANCER UP 973 570 All SZGR 2.0 genes in this pathway
CHANG CORE SERUM RESPONSE DN 209 137 All SZGR 2.0 genes in this pathway
BOYAULT LIVER CANCER SUBCLASS G1 UP 113 70 All SZGR 2.0 genes in this pathway
CHIANG LIVER CANCER SUBCLASS CTNNB1 DN 170 105 All SZGR 2.0 genes in this pathway
CHICAS RB1 TARGETS SENESCENT 572 352 All SZGR 2.0 genes in this pathway
JOHNSTONE PARVB TARGETS 2 DN 336 211 All SZGR 2.0 genes in this pathway
ZWANG TRANSIENTLY UP BY 1ST EGF PULSE ONLY 1839 928 All SZGR 2.0 genes in this pathway