Gene Page:NRIP3

Summary?
GeneID 56675
Symbol NRIP3
Synonyms C11orf14|NY-SAR-105
Description nuclear receptor interacting protein 3
Reference MIM:613125|HGNC:HGNC:1167|Ensembl:ENSG00000175352|HPRD:14840|Vega:OTTHUMG00000165680
Gene type protein-coding
Map location 11p15.3
Pascal p-value 0.447
Sherlock p-value 0.004
Fetal beta -2.347
eGene Myers' cis & trans
元

Gene in Data Sources
Gene set name Method of gene set Description Info
CV:PGCnp Genome-wide Association Study GWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP ID Chromosome Position eGene Gene Entrez ID pvalue qvalue TSS distance eQTL type
rs17014160 chr1 206855799 NRIP3 56675 0.02 trans
snp_a-2090942 0 NRIP3 56675 0.15 trans
rs17014165 chr1 206856485 NRIP3 56675 0.15 trans
rs17270544 chr4 182529568 NRIP3 56675 0.07 trans
rs17211786 chr4 182548238 NRIP3 56675 0.16 trans
rs2131824 chr6 125775939 NRIP3 56675 8.001E-5 trans
rs2248 chr6 125777720 NRIP3 56675 8.001E-5 trans
rs2249 chr6 125777752 NRIP3 56675 8.001E-5 trans
rs1494142 chr6 125778157 NRIP3 56675 0 trans
rs1494160 chr6 125784791 NRIP3 56675 8.001E-5 trans
rs1494158 chr6 125785156 NRIP3 56675 8.001E-5 trans
rs10115578 chr9 3484372 NRIP3 56675 0.01 trans
rs2012359 chr13 25078072 NRIP3 56675 0.13 trans
rs7887792 chrX 20508216 NRIP3 56675 0.01 trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway name Pathway size # SZGR 2.0 genes in pathway Info
ZHONG RESPONSE TO AZACITIDINE AND TSA UP 183 119 All SZGR 2.0 genes in this pathway
FULCHER INFLAMMATORY RESPONSE LECTIN VS LPS UP 579 346 All SZGR 2.0 genes in this pathway
CASORELLI ACUTE PROMYELOCYTIC LEUKEMIA UP 177 110 All SZGR 2.0 genes in this pathway
DEURIG T细胞PROLYMPHOCYTIC白血病 368 234 All SZGR 2.0 genes in this pathway
LIU TARGETS OF VMYB VS CMYB DN 43 30 All SZGR 2.0 genes in this pathway
SENESE HDAC1 TARGETS UP 457 269 All SZGR 2.0 genes in this pathway
SENESE HDAC1 AND HDAC2 TARGETS UP 238 144 All SZGR 2.0 genes in this pathway
WILLIAMS ESR2 TARGETS UP 28 18 All SZGR 2.0 genes in this pathway
BENPORATH EED TARGETS 1062 725 All SZGR 2.0 genes in this pathway
BENPORATH ES WITH H3K27ME3 1118 744 All SZGR 2.0 genes in this pathway
LEE TARGETS OF PTCH1 AND SUFU DN 83 69 All SZGR 2.0 genes in this pathway
BEIER GLIOMA STEM CELL UP 39 17 All SZGR 2.0 genes in this pathway
RUTELLA RESPONSE TO CSF2RB AND IL4 DN 315 201 All SZGR 2.0 genes in this pathway
RUTELLA RESPONSE TO HGF UP 418 282 All SZGR 2.0 genes in this pathway
RUTELLA RESPONSE TO HGF VS CSF2RB AND IL4 UP 408 276 All SZGR 2.0 genes in this pathway
陈G CORE SERUM RESPONSE UP 212 128 All SZGR 2.0 genes in this pathway
MEISSNER BRAIN HCP WITH H3K4ME3 AND H3K27ME3 1069 729 All SZGR 2.0 genes in this pathway
MEISSNER NPC HCP WITH H3K4ME2 491 319 All SZGR 2.0 genes in this pathway
TORCHIA TARGETS OF EWSR1 FLI1 FUSION TOP20 UP 20 14 All SZGR 2.0 genes in this pathway
TORCHIA TARGETS OF EWSR1 FLI1 FUSION UP 271 165 All SZGR 2.0 genes in this pathway