Summary
基因 6300
象征 MAPK12
同义词 erk-6 | erk3 | erk6 | mapk 12 | p38gamma | prkm12 | sapk-3 | sapk3
Description 有丝分裂原激活的蛋白激酶12
Reference MIM:602399|HGNC:HGNC:6874|Ensembl:ENSG00000188130|HPRD:03868|Vega:Otthumg00000030145
基因类型 蛋白质编码
地图位置 22q13.33
Pascal P值 0.014
胎儿β -0.321
DMG 1(# studies)
主持人 前扣带回皮层BA24
尾状基底神经节
小脑半球
小脑
皮质
Frontal Cortex BA9
海马
Hypothalamus
伏隔核基底神经节
Putamen basal ganglia

基因in Data Sources
基因集名称 基因组方法 Description 信息
简历:PGCNP 全基因组协会研究 GWAS
DMG:Nishioka_2013 全基因组DNA甲基化分析 作者研究了来自18例第一期精神分裂症(FESZ)和15个正常对照的18例外周血细胞中DNA的甲基化谱。 1

Section I. Genetics and epigenetics annotation

@差异甲基化基因

探测 染色体 位置 最近的基因 p(dis) Beta (dis) fdr(dis) 学习
CG15134628 22 50699649 MAPK12 -0.023 0.27 DMG:Nishioka_2013

@EQTL注释

SNP ID 染色体 位置 主持人 Gene Entrez ID PVALUE QVALUE TSS距离 EQTL类型
RS199505423 22 50670801 MAPK12 ENSG00000188130.9 1.674E-6 0 29453 gtex_brain_ba24
rs13055135 22 50672479 MAPK12 ENSG00000188130.9 3.453E-7 0 27775 gtex_brain_ba24
rs67157296 22 50672877 MAPK12 ENSG00000188130.9 6.05e-7 0 27377 gtex_brain_ba24
RS67881086 22 50673439 MAPK12 ENSG00000188130.9 3.334e-7 0 26815 gtex_brain_ba24
rs5771256 22 50674232 MAPK12 ENSG00000188130.9 1.004E-6 0 26022 gtex_brain_ba24
rs5771258 22 50675648 MAPK12 ENSG00000188130.9 9.913E-7 0 24606 gtex_brain_ba24
RS9628271 22 50676459 MAPK12 ENSG00000188130.9 4.893E-7 0 23795 gtex_brain_ba24
RS6010213 22 50676839 MAPK12 ENSG00000188130.9 5.548e-7 0 23415 gtex_brain_ba24
RS200713867 22 50676973 MAPK12 ENSG00000188130.9 1.826E-6 0 23281 gtex_brain_ba24
RS6010216 22 50679471 MAPK12 ENSG00000188130.9 5.97E-8 0 20783 gtex_brain_ba24
RS7290465 22 50679758 MAPK12 ENSG00000188130.9 3.087E-8 0 20496 gtex_brain_ba24
rs200968480 22 50682063 MAPK12 ENSG00000188130.9 3.68e-8 0 18191 gtex_brain_ba24
RS7292864 22 50683792 MAPK12 ENSG00000188130.9 6.335E-8 0 16462 gtex_brain_ba24
RS13058062 22 50684296 MAPK12 ENSG00000188130.9 5.796E-8 0 15958 gtex_brain_ba24
RS738334 22 50688235 MAPK12 ENSG00000188130.9 6.152E-13 0 12019 gtex_brain_ba24
RS1555048 22 50688348 MAPK12 ENSG00000188130.9 5.7E-13 0 11906 gtex_brain_ba24
RS909688 22 50689030 MAPK12 ENSG00000188130.9 1.948e-13 0 11224 gtex_brain_ba24
RS2341111 22 50690322 MAPK12 ENSG00000188130.9 1.675E-13 0 9932 gtex_brain_ba24
rs5771276 22 50692562 MAPK12 ENSG00000188130.9 2.964e-12 0 7692 gtex_brain_ba24
RS2009816 22 50692848 MAPK12 ENSG00000188130.9 1.037E-12 0 7406 gtex_brain_ba24
RS2880034 22 50692853 MAPK12 ENSG00000188130.9 1.876E-8 0 7401 gtex_brain_ba24
RS2009815 22 50692856 MAPK12 ENSG00000188130.9 7.845e-10 0 7398 gtex_brain_ba24
RS4077315 22 50692908 MAPK12 ENSG00000188130.9 3.959E-9 0 7346 gtex_brain_ba24
RS2002766 22 50692966 MAPK12 ENSG00000188130.9 1.648e-11 0 7288 gtex_brain_ba24
rs5771280 22 50693340 MAPK12 ENSG00000188130.9 5.21e-14 0 6914 gtex_brain_ba24
rs5771281 22 50693479 MAPK12 ENSG00000188130.9 5.206E-14 0 6775 gtex_brain_ba24
rs5771282 22 50693521 MAPK12 ENSG00000188130.9 4.042E-12 0 6733 gtex_brain_ba24
RS6010218 22 50693534 MAPK12 ENSG00000188130.9 8.961e-12 0 6720 gtex_brain_ba24
RS6010219 22 50693538 MAPK12 ENSG00000188130.9 9.361e-11 0 6716 gtex_brain_ba24
RS6010220 22 50693554 MAPK12 ENSG00000188130.9 1.218e-13 0 6700 gtex_brain_ba24
RS1129880 22 50694297 MAPK12 ENSG00000188130.9 6.495e-12 0 5957 gtex_brain_ba24
rs5771284 22 50695270 MAPK12 ENSG00000188130.9 6.474e-12 0 4984 gtex_brain_ba24
rs5771285 22 50695908 MAPK12 ENSG00000188130.9 3.992E-13 0 4346 gtex_brain_ba24
rs5771111 22 50695946 MAPK12 ENSG00000188130.9 5.147E-14 0 4308 gtex_brain_ba24
rs5771258 22 50675648 MAPK12 ENSG00000188130.9 1.396E-6 0 24606 gtex_brain_putamen_basal
RS7290465 22 50679758 MAPK12 ENSG00000188130.9 1.908E-6 0 20496 gtex_brain_putamen_basal
RS7292864 22 50683792 MAPK12 ENSG00000188130.9 4.098E-7 0 16462 gtex_brain_putamen_basal
RS13058062 22 50684296 MAPK12 ENSG00000188130.9 5.641E-8 0 15958 gtex_brain_putamen_basal
RS738334 22 50688235 MAPK12 ENSG00000188130.9 3.187E-8 0 12019 gtex_brain_putamen_basal
RS1555048 22 50688348 MAPK12 ENSG00000188130.9 3.066e-8 0 11906 gtex_brain_putamen_basal
RS2341111 22 50690322 MAPK12 ENSG00000188130.9 1.578E-8 0 9932 gtex_brain_putamen_basal
rs5771276 22 50692562 MAPK12 ENSG00000188130.9 1.621E-9 0 7692 gtex_brain_putamen_basal
RS2009816 22 50692848 MAPK12 ENSG00000188130.9 2.11E-8 0 7406 gtex_brain_putamen_basal
RS2880034 22 50692853 MAPK12 ENSG00000188130.9 1.233E-8 0 7401 gtex_brain_putamen_basal
RS2009815 22 50692856 MAPK12 ENSG00000188130.9 3.79E-9 0 7398 gtex_brain_putamen_basal
RS4077315 22 50692908 MAPK12 ENSG00000188130.9 2.837E-8 0 7346 gtex_brain_putamen_basal
RS2002766 22 50692966 MAPK12 ENSG00000188130.9 2.04e-9 0 7288 gtex_brain_putamen_basal
rs5771280 22 50693340 MAPK12 ENSG00000188130.9 4.67E-9 0 6914 gtex_brain_putamen_basal
rs5771281 22 50693479 MAPK12 ENSG00000188130.9 4.655e-9 0 6775 gtex_brain_putamen_basal
RS6010218 22 50693534 MAPK12 ENSG00000188130.9 1.384E-8 0 6720 gtex_brain_putamen_basal
RS6010219 22 50693538 MAPK12 ENSG00000188130.9 1.219E-9 0 6716 gtex_brain_putamen_basal
RS6010220 22 50693554 MAPK12 ENSG00000188130.9 5.11E-9 0 6700 gtex_brain_putamen_basal
RS1129880 22 50694297 MAPK12 ENSG00000188130.9 1.225E-8 0 5957 gtex_brain_putamen_basal
rs5771284 22 50695270 MAPK12 ENSG00000188130.9 9.217E-9 0 4984 gtex_brain_putamen_basal
rs5771285 22 50695908 MAPK12 ENSG00000188130.9 5.183E-9 0 4346 gtex_brain_putamen_basal
rs5771111 22 50695946 MAPK12 ENSG00000188130.9 4.597E-9 0 4308 gtex_brain_putamen_basal

第二节。转录组注释

一般基因表达(GTEX)

无法使用

Devlopment期间的基因表达(BrainCloud)

Footnote:
总共绘制了269个时间点,n = 38个胎儿样品(x = 1:38)。每个三角形代表一个时间点。

时间变化的基因表达(brainspan)

Footnote:
SC:亚皮质区域;SM:感觉运动区域;FC:额叶皮层;和TP:颞顶皮层
ST1:胎儿(13-26个概念后周),ST2:婴儿早期至童年(4个月至11年)和ST3:青春期至成年期(13-23年)
所示的栏表示表达分布的较低25%和上层25%。

大脑区域的顶级共表达基因

前10个积极共表达的基因
基因 皮尔逊的相关性 斯皮尔曼的相关性
Rev3l 0.86 0.91
RHOBTB1 0.83 0.84
HMGCS1 0.82 0.88
NFE2L3 0.81 0.88
L3MBTL3 0.81 0.90
SCN3A 0.81 0.91
KIAA0895 0.81 0.88
disp1 0.80 0.85
FAM161A 0.80 0.87
ZBTB8B 0.79 0.87
前10个负共表达基因
基因 皮尔逊的相关性 斯皮尔曼的相关性
HLA-F -0.59 -0.76
REEP6 -0.57 -0.56
AIFM3 -0.56 -0.72
CA4 -0.56 -0.73
TSC22D4 -0.56 -0.75
aldoc -0.56 -0.68
AF347015.31 -0.55 -0.80
FBXO2 -0.55 -0.61
S100B -0.55 -0.75
AF347015.27 -0.55 -0.78

Section V. Pathway annotation

路径名 路径大小 # SZGR 2.0 genes in pathway 信息
kegg mapk信号通路 267 205 All SZGR 2.0 genes in this pathway
Kegg卵母细胞减数分裂 114 79 All SZGR 2.0 genes in this pathway
KEGG VEGF SIGNALING PATHWAY 76 53 All SZGR 2.0 genes in this pathway
Kegg Toll像受体信号通路 102 88 All SZGR 2.0 genes in this pathway
kegg点头喜欢受体信号通路 62 47 All SZGR 2.0 genes in this pathway
我喜欢KEGG钻机RECEPTOR SIGNALING PATHWAY 71 51 All SZGR 2.0 genes in this pathway
kegg t细胞受体信号通路 108 89 All SZGR 2.0 genes in this pathway
kegg fc epsilon ri信号传导途径 79 58 All SZGR 2.0 genes in this pathway
kegg白细胞跨内皮迁移 118 78 All SZGR 2.0 genes in this pathway
KEGG神经营养蛋白信号传导途径 126 103 All SZGR 2.0 genes in this pathway
kegg gnRH信号通路 101 77 All SZGR 2.0 genes in this pathway
KEGG孕酮介导的卵母细胞成熟 86 59 All SZGR 2.0 genes in this pathway
KEGG肌萎缩性侧索硬化症ALS 53 43 All SZGR 2.0 genes in this pathway
幽门螺杆菌感染中的KEGG上皮细胞信号传导 68 44 All SZGR 2.0 genes in this pathway
KEGG LEISHMANIA INFECTION 72 56 All SZGR 2.0 genes in this pathway
Biocarta MAPK途径 87 68 All SZGR 2.0 genes in this pathway
SIG CD40Pathwaymap 34 28 All SZGR 2.0 genes in this pathway
ST P38 MAPK途径 37 28 All SZGR 2.0 genes in this pathway
pid rhoa途径 45 33 All SZGR 2.0 genes in this pathway
PID P38伽马三角洲途径 11 9 All SZGR 2.0 genes in this pathway
NGF的Reactome信号传导 217 167 All SZGR 2.0 genes in this pathway
Reactome发育生物学 396 292 All SZGR 2.0 genes in this pathway
REACTOME细胞细胞通讯 120 77 All SZGR 2.0 genes in this pathway
Reactome对RAS的信号传导 27 23 All SZGR 2.0 genes in this pathway
Reactome NGF信号通过TRKA从质膜发出 137 105 All SZGR 2.0 genes in this pathway
向ERK的Reactome信号传导 36 30 All SZGR 2.0 genes in this pathway
REACTOME P38MAPK EVENTS 13 12 All SZGR 2.0 genes in this pathway
反应组肌发生 28 20 All SZGR 2.0 genes in this pathway
Reactome DSCAM相互作用 11 10 All SZGR 2.0 genes in this pathway
Reactome先天免疫系统 279 178 All SZGR 2.0 genes in this pathway
Reactome免疫系统 933 616 All SZGR 2.0 genes in this pathway
Reactome Nod1 2信号通路 30 22 All SZGR 2.0 genes in this pathway
反应组核苷酸结合结构域富含受体NLR信号通路富含亮氨酸重复途径 46 33 All SZGR 2.0 genes in this pathway
Gaussmann MLL AF4融合靶向F 185 119 All SZGR 2.0 genes in this pathway
Spielman淋巴细胞欧洲vs亚洲 479 299 All SZGR 2.0 genes in this pathway
小藻tati靶向DN 17 12 All SZGR 2.0 genes in this pathway
里克曼转移DN 261 155 All SZGR 2.0 genes in this pathway
Nikolsky乳腺癌22q13 Amplicon 17 15 All SZGR 2.0 genes in this pathway
BYSTRYKH HEMATOPOIESIS STEM CELL QTL TRANS 882 572 All SZGR 2.0 genes in this pathway
GOLDRATH IMMUNE MEMORY 65 42 All SZGR 2.0 genes in this pathway
亚伯拉罕ALPC与多发性骨髓瘤 26 22 All SZGR 2.0 genes in this pathway
阿尔茨海默氏症疾病 1691 1088 All SZGR 2.0 genes in this pathway
TSENG IRS1 TARGETS UP 113 71 All SZGR 2.0 genes in this pathway
TSENG ADIPOGENIC POTENTIAL UP 30 19 All SZGR 2.0 genes in this pathway
YOSHIMURA MAPK8 TARGETS UP 1305 895 All SZGR 2.0 genes in this pathway
Meissner Brain HCP带有H3K4ME3和H3K27ME3 1069 729 All SZGR 2.0 genes in this pathway
woo肝癌复发 105 75 All SZGR 2.0 genes in this pathway
Keshelava多种耐药性 88 56 All SZGR 2.0 genes in this pathway