基因页:TTC3
概括?
基因 | 7267 |
象征 | TTC3 |
Synonyms | dcrr1 | rnf105 | tprdiii |
Description | 四肽重复域3 |
Reference | MIM:602259|HGNC:HGNC:12393|Ensembl:ENSG00000182670|HPRD:03773|Vega:Otthumg00000086654 |
基因类型 | 蛋白质编码 |
地图位置 | 21q22.2 |
Pascal p-value | 0.21 |
Sherlock P值 | 0.006 |
胎儿β | 1.441 |
主持人 | 尾状基底神经节 小脑半球 小脑 皮质 额叶皮质BA9 下丘脑 伏隔核基底神经节 Putamen basal ganglia 元 |
支持 | CompositeSet Darnell FMRP目标 Ascano FMRP助教rgets |
数据源中的基因
基因集名称 | Method of gene set | Description | 信息 |
---|---|---|---|
CV:PGCnp | 全基因组协会研究 | GWAS | |
DMG:Wockner_2014 | 全基因组DNA甲基化分析 | 该数据集包括4641个差异甲基化探针,对应于精神分裂症患者(n = 24)和对照组(n = 24)之间的2929个独特基因。 | 1 |
第一节遗传学和表观遗传学注释
差异甲基化基因
探测 | 染色体 | 位置 | 最近的基因 | p(dis) | beta(dis) | fdr(dis) | 学习 |
---|---|---|---|---|---|---|---|
CG24693520 | 21 | 38445266 | PIGP; TTC3 | 1.815E-4 | -0.365 | 0.034 | DMG:Wockner_2014 |
EQTL注释
SNP ID | 染色体 | 位置 | 主持人 | Gene Entrez ID | PVALUE | QVALUE | TSS距离 | EQTL类型 |
---|---|---|---|---|---|---|---|---|
RS1235345 | 21 | 38432325 | TTC3 | ENSG00000182670.9 | 1.158E-8 | 0 | -13201 | gtex_brain_putamen_basal |
RS2249947 | 21 | 38433519 | TTC3 | ENSG00000182670.9 | 3.45e-9 | 0 | -12007 | gtex_brain_putamen_basal |
RS397760628 | 21 | 38436954 | TTC3 | ENSG00000182670.9 | 3.221E-9 | 0 | -8572 | gtex_brain_putamen_basal |
RS8127496 | 21 | 38442482 | TTC3 | ENSG00000182670.9 | 3.45e-9 | 0 | -3044 | gtex_brain_putamen_basal |
RS28503645 | 21 | 38443674 | TTC3 | ENSG00000182670.9 | 5.652E-10 | 0 | -1852 | gtex_brain_putamen_basal |
RS2298682 | 21 | 38444890 | TTC3 | ENSG00000182670.9 | 2.81E-9 | 0 | -636 | gtex_brain_putamen_basal |
RS2298683 | 21 | 38445069 | TTC3 | ENSG00000182670.9 | 6.537E-9 | 0 | -457 | gtex_brain_putamen_basal |
RS2298684 | 21 | 38445095 | TTC3 | ENSG00000182670.9 | 2.712E-9 | 0 | -431 | gtex_brain_putamen_basal |
RS8128474 | 21 | 38446319 | TTC3 | ENSG00000182670.9 | 1.367E-6 | 0 | 793 | gtex_brain_putamen_basal |
rs1543748 | 21 | 38446581 | TTC3 | ENSG00000182670.9 | 3.084e-9 | 0 | 1055 | gtex_brain_putamen_basal |
rs1543749 | 21 | 38446621 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 1095 | gtex_brain_putamen_basal |
rs1543750 | 21 | 38446918 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 1392 | gtex_brain_putamen_basal |
RS5843790 | 21 | 38446955 | TTC3 | ENSG00000182670.9 | 2.956E-9 | 0 | 1429 | gtex_brain_putamen_basal |
RS11412056 | 21 | 38446961 | TTC3 | ENSG00000182670.9 | 5.816e-8 | 0 | 1435 | gtex_brain_putamen_basal |
RS4817843 | 21 | 38447040 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 1514年 | gtex_brain_putamen_basal |
RS4817844 | 21 | 38447064 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 1538年 | gtex_brain_putamen_basal |
RS4817845 | 21 | 38447132 | TTC3 | ENSG00000182670.9 | 3.025e-9 | 0 | 1606 | gtex_brain_putamen_basal |
rs6517402 | 21 | 38447423 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 1897 | gtex_brain_putamen_basal |
rs8133549 | 21 | 38447489 | TTC3 | ENSG00000182670.9 | 3.033e-9 | 0 | 1963年 | gtex_brain_putamen_basal |
RS1155785 | 21 | 38447939 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 2413 | gtex_brain_putamen_basal |
RS1155786 | 21 | 38448025 | TTC3 | ENSG00000182670.9 | 9.344e-10 | 0 | 2499 | gtex_brain_putamen_basal |
RS1155787 | 21 | 38448069 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 2543 | gtex_brain_putamen_basal |
RS60447195 | 21 | 38448600 | TTC3 | ENSG00000182670.9 | 2.096E-9 | 0 | 3074 | gtex_brain_putamen_basal |
RS1015549 | 21 | 38448880 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 3354 | gtex_brain_putamen_basal |
RS1015551 | 21 | 38449510 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 3984 | gtex_brain_putamen_basal |
RS7280371 | 21 | 38450008 | TTC3 | ENSG00000182670.9 | 3.124e-9 | 0 | 4482 | gtex_brain_putamen_basal |
RS9975361 | 21 | 38450025 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 4499 | gtex_brain_putamen_basal |
rs61701101 | 21 | 38450317 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 4791 | gtex_brain_putamen_basal |
RS9975168 | 21 | 38450557 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 5031 | gtex_brain_putamen_basal |
RS9977602 | 21 | 38450650 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 5124 | gtex_brain_putamen_basal |
RS397776637 | 21 | 38450906 | TTC3 | ENSG00000182670.9 | 6.807E-10 | 0 | 5380 | gtex_brain_putamen_basal |
RS7275582 | 21 | 38451130 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 5604 | gtex_brain_putamen_basal |
RS7276917 | 21 | 38451334 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 5808 | gtex_brain_putamen_basal |
RS9981706 | 21 | 38451970 | TTC3 | ENSG00000182670.9 | 3.397E-9 | 0 | 6444 | gtex_brain_putamen_basal |
RS9981207 | 21 | 38451977 | TTC3 | ENSG00000182670.9 | 3.358e-9 | 0 | 6451 | gtex_brain_putamen_basal |
RS9981136 | 21 | 38452022 | TTC3 | ENSG00000182670.9 | 2.946E-9 | 0 | 6496 | gtex_brain_putamen_basal |
RS9981226 | 21 | 38452127 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 6601 | gtex_brain_putamen_basal |
RS2187101 | 21 | 38452379 | TTC3 | ENSG00000182670.9 | 8.801E-10 | 0 | 6853 | gtex_brain_putamen_basal |
RS2156076 | 21 | 38452634 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 7108 | gtex_brain_putamen_basal |
RS4411798 | 21 | 38453183 | TTC3 | ENSG00000182670.9 | 9.344e-10 | 0 | 7657 | gtex_brain_putamen_basal |
RS4572679 | 21 | 38453227 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 7701 | gtex_brain_putamen_basal |
RS10154032 | 21 | 38453459 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 7933 | gtex_brain_putamen_basal |
RS10154036 | 21 | 38453510 | TTC3 | ENSG00000182670.9 | 2.586E-7 | 0 | 7984 | gtex_brain_putamen_basal |
RS62223589 | 21 | 38453695 | TTC3 | ENSG00000182670.9 | 2.934e-9 | 0 | 8169 | gtex_brain_putamen_basal |
RS9976621 | 21 | 38454339 | TTC3 | ENSG00000182670.9 | 3.057E-9 | 0 | 8813 | gtex_brain_putamen_basal |
rs9977232 | 21 | 38454456 | TTC3 | ENSG00000182670.9 | 2.922e-9 | 0 | 8930 | gtex_brain_putamen_basal |
rs11701556 | 21 | 38455153 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 9627 | gtex_brain_putamen_basal |
RS2835574 | 21 | 38455324 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 9798 | gtex_brain_putamen_basal |
RS2835575 | 21 | 38455936 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 10410 | gtex_brain_putamen_basal |
RS28666643 | 21 | 38455999 | TTC3 | ENSG00000182670.9 | 7.259e-11 | 0 | 10473 | gtex_brain_putamen_basal |
RS9974286 | 21 | 38456832 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 11306 | gtex_brain_putamen_basal |
RS9974486 | 21 | 38457069 | TTC3 | ENSG00000182670.9 | 4.584e-9 | 0 | 11543 | gtex_brain_putamen_basal |
RS9974798 | 21 | 38457272 | TTC3 | ENSG00000182670.9 | 3.262E-10 | 0 | 11746 | gtex_brain_putamen_basal |
RS2835576 | 21 | 38457393 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 11867 | gtex_brain_putamen_basal |
RS2835577 | 21 | 38457457 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 11931 | gtex_brain_putamen_basal |
RS2835578 | 21 | 38457671 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 12145 | gtex_brain_putamen_basal |
RS13050226 | 21 | 38457708 | TTC3 | ENSG00000182670.9 | 8.22e-11 | 0 | 12182 | gtex_brain_putamen_basal |
RS2835579 | 21 | 38457965 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 12439 | gtex_brain_putamen_basal |
RS2835582 | 21 | 38458773 | TTC3 | ENSG00000182670.9 | 3.064e-9 | 0 | 13247 | gtex_brain_putamen_basal |
RS2835584 | 21 | 38460338 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 14812 | gtex_brain_putamen_basal |
RS2835585 | 21 | 38460488 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 14962 | gtex_brain_putamen_basal |
RS2835586 | 21 | 38461326 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 15800 | gtex_brain_putamen_basal |
RS2835587 | 21 | 38461795 | TTC3 | ENSG00000182670.9 | 3.034e-9 | 0 | 16269 | gtex_brain_putamen_basal |
rs9984861 | 21 | 38462028 | TTC3 | ENSG00000182670.9 | 5.596E-9 | 0 | 16502 | gtex_brain_putamen_basal |
RS9984911 | 21 | 38462241 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 16715 | gtex_brain_putamen_basal |
RS3787780 | 21 | 38462614 | TTC3 | ENSG00000182670.9 | 9.344e-10 | 0 | 17088 | gtex_brain_putamen_basal |
RS2835588 | 21 | 38462716 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 17190 | gtex_brain_putamen_basal |
RS3787782 | 21 | 38462909 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 17383 | gtex_brain_putamen_basal |
RS3787783 | 21 | 38462959 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 17433 | gtex_brain_putamen_basal |
RS3827191 | 21 | 38463109 | TTC3 | ENSG00000182670.9 | 9.344e-10 | 0 | 17583 | gtex_brain_putamen_basal |
RS2835589 | 21 | 38463342 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 17816 | gtex_brain_putamen_basal |
RS2835590 | 21 | 38463406 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 17880 | gtex_brain_putamen_basal |
RS3787786 | 21 | 38463436 | TTC3 | ENSG00000182670.9 | 3.029e-9 | 0 | 17910 | gtex_brain_putamen_basal |
RS3787787 | 21 | 38463452 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 17926年 | gtex_brain_putamen_basal |
RS9979811 | 21 | 38463967 | TTC3 | ENSG00000182670.9 | 1.363E-9 | 0 | 18441 | gtex_brain_putamen_basal |
RS2835592 | 21 | 38464387 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 18861 | gtex_brain_putamen_basal |
RS13050757 | 21 | 38465345 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 19819 | gtex_brain_putamen_basal |
RS13046924 | 21 | 38465620 | TTC3 | ENSG00000182670.9 | 9.005e-9 | 0 | 20094 | gtex_brain_putamen_basal |
RS2835593 | 21 | 38465873 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 20347 | gtex_brain_putamen_basal |
RS2835594 | 21 | 38466064 | TTC3 | ENSG00000182670.9 | 3.086e-9 | 0 | 20538 | gtex_brain_putamen_basal |
RS2835595 | 21 | 38466203 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 20677 | gtex_brain_putamen_basal |
RS3753070 | 21 | 38466261 | TTC3 | ENSG00000182670.9 | 3.56E-9 | 0 | 20735 | gtex_brain_putamen_basal |
RS200069136 | 21 | 38466261 | TTC3 | ENSG00000182670.9 | 9.001E-7 | 0 | 20735 | gtex_brain_putamen_basal |
RS2835597 | 21 | 38466539 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 21013 | gtex_brain_putamen_basal |
RS3753073 | 21 | 38466615 | TTC3 | ENSG00000182670.9 | 7.259e-11 | 0 | 21089 | gtex_brain_putamen_basal |
RS2835598 | 21 | 38466669 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 21143 | gtex_brain_putamen_basal |
RS2835599 | 21 | 38466937 | TTC3 | ENSG00000182670.9 | 9.344e-10 | 0 | 21411 | gtex_brain_putamen_basal |
RS2006941 | 21 | 38467616 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 22090 | gtex_brain_putamen_basal |
rs2251161 | 21 | 38467857 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 22331 | gtex_brain_putamen_basal |
RS2835600 | 21 | 38468958 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 23432 | gtex_brain_putamen_basal |
RS2835601 | 21 | 38469017 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 23491 | gtex_brain_putamen_basal |
RS2835602 | 21 | 38469069 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 23543 | gtex_brain_putamen_basal |
RS7277657 | 21 | 38469523 | TTC3 | ENSG00000182670.9 | 2.944e-9 | 0 | 23997 | gtex_brain_putamen_basal |
RS4817849 | 21 | 38469796 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 24270 | gtex_brain_putamen_basal |
RS11911508 | 21 | 38470504 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 24978 | gtex_brain_putamen_basal |
RS9977314 | 21 | 38471963 | TTC3 | ENSG00000182670.9 | 9.344e-10 | 0 | 26437 | gtex_brain_putamen_basal |
RS68084341 | 21 | 38474341 | TTC3 | ENSG00000182670.9 | 3.107E-9 | 0 | 28815 | gtex_brain_putamen_basal |
RS34273703 | 21 | 38475019 | TTC3 | ENSG00000182670.9 | 2.057E-9 | 0 | 29493 | gtex_brain_putamen_basal |
rs73201942 | 21 | 38475164 | TTC3 | ENSG00000182670.9 | 8.22e-11 | 0 | 29638 | gtex_brain_putamen_basal |
RS59637309 | 21 | 38475398 | TTC3 | ENSG00000182670.9 | 2.952E-9 | 0 | 29872 | gtex_brain_putamen_basal |
RS11088381 | 21 | 38478429 | TTC3 | ENSG00000182670.9 | 3.267E-9 | 0 | 32903 | gtex_brain_putamen_basal |
RS9974374 | 21 | 38479885 | TTC3 | ENSG00000182670.9 | 9.344e-10 | 0 | 34359 | gtex_brain_putamen_basal |
RS8130846 | 21 | 38480242 | TTC3 | ENSG00000182670.9 | 3.054e-9 | 0 | 34716 | gtex_brain_putamen_basal |
RS8127148 | 21 | 38481292 | TTC3 | ENSG00000182670.9 | 3.262E-10 | 0 | 35766 | gtex_brain_putamen_basal |
RS1793870 | 21 | 38481436 | TTC3 | ENSG00000182670.9 | 9.408E-11 | 0 | 35910 | gtex_brain_putamen_basal |
RS8127182 | 21 | 38481505 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 35979 | gtex_brain_putamen_basal |
RS111263176 | 21 | 38482304 | TTC3 | ENSG00000182670.9 | 5.59e-7 | 0 | 36778 | gtex_brain_putamen_basal |
rs62223615 | 21 | 38484175 | TTC3 | ENSG00000182670.9 | 8.525e-8 | 0 | 38649 | gtex_brain_putamen_basal |
RS150259029 | 21 | 38485178 | TTC3 | ENSG00000182670.9 | 3.583E-8 | 0 | 39652 | gtex_brain_putamen_basal |
RS8131234 | 21 | 38487274 | TTC3 | ENSG00000182670.9 | 8.42E-9 | 0 | 41748 | gtex_brain_putamen_basal |
RS4816560 | 21 | 38487561 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 42035 | gtex_brain_putamen_basal |
RS397866600 | 21 | 38488922 | TTC3 | ENSG00000182670.9 | 9.133e-10 | 0 | 43396 | gtex_brain_putamen_basal |
RS71198850 | 21 | 38489352 | TTC3 | ENSG00000182670.9 | 4.036E-7 | 0 | 43826 | gtex_brain_putamen_basal |
RS4399800 | 21 | 38489478 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 43952 | gtex_brain_putamen_basal |
rs2040341 | 21 | 38489753 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 44227 | gtex_brain_putamen_basal |
RS7277150 | 21 | 38490006 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 44480 | gtex_brain_putamen_basal |
RS2835605 | 21 | 38490734 | TTC3 | ENSG00000182670.9 | 3.039E-9 | 0 | 45208 | gtex_brain_putamen_basal |
RS2835606 | 21 | 38490851 | TTC3 | ENSG00000182670.9 | 8.22e-11 | 0 | 45325 | gtex_brain_putamen_basal |
RS1003719 | 21 | 38491095 | TTC3 | ENSG00000182670.9 | 2.207E-7 | 0 | 45569 | gtex_brain_putamen_basal |
RS2835607 | 21 | 38491973 | TTC3 | ENSG00000182670.9 | 2.207E-7 | 0 | 46447 | gtex_brain_putamen_basal |
RS2154536 | 21 | 38492147 | TTC3 | ENSG00000182670.9 | 2.207E-7 | 0 | 46621 | gtex_brain_putamen_basal |
RS1003721 | 21 | 38492657 | TTC3 | ENSG00000182670.9 | 3.669E-8 | 0 | 47131 | gtex_brain_putamen_basal |
RS2835608 | 21 | 38493455 | TTC3 | ENSG00000182670.9 | 2.207E-7 | 0 | 47929 | gtex_brain_putamen_basal |
rs6517404 | 21 | 38494918 | TTC3 | ENSG00000182670.9 | 3.262E-10 | 0 | 49392 | gtex_brain_putamen_basal |
RS2835613 | 21 | 38496883 | TTC3 | ENSG00000182670.9 | 1.043E-9 | 0 | 51357 | gtex_brain_putamen_basal |
RS2835615 | 21 | 38497303 | TTC3 | ENSG00000182670.9 | 1.043E-9 | 0 | 51777 | gtex_brain_putamen_basal |
RS10154113 | 21 | 38497490 | TTC3 | ENSG00000182670.9 | 9.389E-10 | 0 | 51964 | gtex_brain_putamen_basal |
rs9981715 | 21 | 38499610 | TTC3 | ENSG00000182670.9 | 2.806E-10 | 0 | 54084 | gtex_brain_putamen_basal |
RS12185870 | 21 | 38500689 | TTC3 | ENSG00000182670.9 | 1.935E-8 | 0 | 55163 | gtex_brain_putamen_basal |
RS12185869 | 21 | 38500710 | TTC3 | ENSG00000182670.9 | 1.467E-8 | 0 | 55184 | gtex_brain_putamen_basal |
rs9985082 | 21 | 38501021 | TTC3 | ENSG00000182670.9 | 3.542E-10 | 0 | 55495 | gtex_brain_putamen_basal |
RS8129231 | 21 | 38501034 | TTC3 | ENSG00000182670.9 | 2.826E-10 | 0 | 55508 | gtex_brain_putamen_basal |
RS2154537 | 21 | 38502012 | TTC3 | ENSG00000182670.9 | 1.766E-10 | 0 | 56486 | gtex_brain_putamen_basal |
RS3787788 | 21 | 38502804 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 57278 | gtex_brain_putamen_basal |
RS2000417 | 21 | 38502868 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 57342 | gtex_brain_putamen_basal |
RS2835618 | 21 | 38503126 | TTC3 | ENSG00000182670.9 | 4.56e-11 | 0 | 57600 | gtex_brain_putamen_basal |
RS4261789 | 21 | 38503762 | TTC3 | ENSG00000182670.9 | 1.773E-10 | 0 | 58236 | gtex_brain_putamen_basal |
RS10470177 | 21 | 38504653 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 59127 | gtex_brain_putamen_basal |
RS2835619 | 21 | 38505380 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 59854 | gtex_brain_putamen_basal |
RS2835620 | 21 | 38505581 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 60055 | gtex_brain_putamen_basal |
rs7275984 | 21 | 38505696 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 60170 | gtex_brain_putamen_basal |
RS3992 | 21 | 38505969 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 60443 | gtex_brain_putamen_basal |
RS2252893 | 21 | 38507572 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 62046 | gtex_brain_putamen_basal |
RS7282195 | 21 | 38508619 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 63093 | gtex_brain_putamen_basal |
RS35199609 | 21 | 38510262 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 64736 | gtex_brain_putamen_basal |
RS2835621 | 21 | 38510616 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 65090 | gtex_brain_putamen_basal |
RS1133001 | 21 | 38512956 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 67430 | gtex_brain_putamen_basal |
rs8134466 | 21 | 38516508 | TTC3 | ENSG00000182670.9 | 4.313E-10 | 0 | 70982 | gtex_brain_putamen_basal |
rs56127106 | 21 | 38516549 | TTC3 | ENSG00000182670.9 | 1.253E-9 | 0 | 71023 | gtex_brain_putamen_basal |
RS764175 | 21 | 38517058 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 71532 | gtex_brain_putamen_basal |
RS2018521 | 21 | 38517264 | TTC3 | ENSG00000182670.9 | 2.098e-11 | 0 | 71738 | gtex_brain_putamen_basal |
rs13046844 | 21 | 38517603 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 72077 | gtex_brain_putamen_basal |
RS2252402 | 21 | 38520720 | TTC3 | ENSG00000182670.9 | 9.781e-12 | 0 | 75194 | gtex_brain_putamen_basal |
RS2835629 | 21 | 38521660 | TTC3 | ENSG00000182670.9 | 2.819E-10 | 0 | 76134 | gtex_brain_putamen_basal |
RS397705538 | 21 | 38521678 | TTC3 | ENSG00000182670.9 | 2.854E-10 | 0 | 76152 | gtex_brain_putamen_basal |
RS2835630 | 21 | 38521842 | TTC3 | ENSG00000182670.9 | 1.773E-10 | 0 | 76316 | gtex_brain_putamen_basal |
RS2257091 | 21 | 38522618 | TTC3 | ENSG00000182670.9 | 1.773E-10 | 0 | 77092 | gtex_brain_putamen_basal |
RS3737540 | 21 | 38523266 | TTC3 | ENSG00000182670.9 | 7.666e-10 | 0 | 77740 | gtex_brain_putamen_basal |
RS2835633 | 21 | 38525019 | TTC3 | ENSG00000182670.9 | 4.56e-11 | 0 | 79493 | gtex_brain_putamen_basal |
RS1053808 | 21 | 38525356 | TTC3 | ENSG00000182670.9 | 4.56e-11 | 0 | 79830 | gtex_brain_putamen_basal |
RS767998 | 21 | 38525652 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 80126 | gtex_brain_putamen_basal |
RS2835634 | 21 | 38528270 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 82744 | gtex_brain_putamen_basal |
RS201116403 | 21 | 38528341 | TTC3 | ENSG00000182670.9 | 3.118E-10 | 0 | 82815 | gtex_brain_putamen_basal |
RS35023563 | 21 | 38528342 | TTC3 | ENSG00000182670.9 | 3.077E-10 | 0 | 82816 | gtex_brain_putamen_basal |
RS71198854 | 21 | 38528508 | TTC3 | ENSG00000182670.9 | 9.752E-12 | 0 | 82982 | gtex_brain_putamen_basal |
RS2187577 | 21 | 38533341 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 87815 | gtex_brain_putamen_basal |
RS2298685 | 21 | 38533390 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 87864 | gtex_brain_putamen_basal |
RS2835638 | 21 | 38534533 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 89007 | gtex_brain_putamen_basal |
RS9978998 | 21 | 38535848 | TTC3 | ENSG00000182670.9 | 2.819E-10 | 0 | 90322 | gtex_brain_putamen_basal |
RS2835639 | 21 | 38537016 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 91490 | gtex_brain_putamen_basal |
RS2835640 | 21 | 38537380 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 91854 | gtex_brain_putamen_basal |
RS2835642 | 21 | 38539066 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 93540 | gtex_brain_putamen_basal |
RS2156077 | 21 | 38539357 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 93831 | gtex_brain_putamen_basal |
RS2000413 | 21 | 38539718 | TTC3 | ENSG00000182670.9 | 6.691E-8 | 0 | 94192 | gtex_brain_putamen_basal |
RS2000416 | 21 | 38540089 | TTC3 | ENSG00000182670.9 | 6.691E-8 | 0 | 94563 | gtex_brain_putamen_basal |
RS58008706 | 21 | 38540506 | TTC3 | ENSG00000182670.9 | 6.691E-8 | 0 | 94980 | gtex_brain_putamen_basal |
RS1981432 | 21 | 38541356 | TTC3 | ENSG00000182670.9 | 1.773E-10 | 0 | 95830 | gtex_brain_putamen_basal |
RS1981433 | 21 | 38542223 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 96697 | gtex_brain_putamen_basal |
rs55992706 | 21 | 38542749 | TTC3 | ENSG00000182670.9 | 2.957E-10 | 0 | 97223 | gtex_brain_putamen_basal |
rs55740803 | 21 | 38542761 | TTC3 | ENSG00000182670.9 | 2.957E-10 | 0 | 97235 | gtex_brain_putamen_basal |
RS56268364 | 21 | 38542765 | TTC3 | ENSG00000182670.9 | 2.957E-10 | 0 | 97239 | gtex_brain_putamen_basal |
RS2835644 | 21 | 38545610 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 100084 | gtex_brain_putamen_basal |
RS2156078 | 21 | 38546473 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 100947 | gtex_brain_putamen_basal |
RS2835646 | 21 | 38546574 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 101048 | gtex_brain_putamen_basal |
RS2835647 | 21 | 38546773 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 101247 | gtex_brain_putamen_basal |
rs71328561 | 21 | 38546806 | TTC3 | ENSG00000182670.9 | 2.821E-10 | 0 | 101280 | gtex_brain_putamen_basal |
RS8131944 | 21 | 38547215 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 101689 | gtex_brain_putamen_basal |
rs2040125 | 21 | 38549236 | TTC3 | ENSG00000182670.9 | 1.013e-11 | 0 | 103710 | gtex_brain_putamen_basal |
RS2051398 | 21 | 38550258 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 104732 | gtex_brain_putamen_basal |
RS8126491 | 21 | 38551219 | TTC3 | ENSG00000182670.9 | 2.844e-10 | 0 | 105693 | gtex_brain_putamen_basal |
RS8126941 | 21 | 38551542 | TTC3 | ENSG00000182670.9 | 2.179E-9 | 0 | 106016 | gtex_brain_putamen_basal |
RS8130643 | 21 | 38551715 | TTC3 | ENSG00000182670.9 | 2.838e-10 | 0 | 106189 | gtex_brain_putamen_basal |
RS13046303 | 21 | 38551976 | TTC3 | ENSG00000182670.9 | 2.53e-11 | 0 | 106450 | gtex_brain_putamen_basal |
RS8129942 | 21 | 38552070 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 106544 | gtex_brain_putamen_basal |
rs8130069 | 21 | 38552116 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 106590 | gtex_brain_putamen_basal |
RS2835649 | 21 | 38552230 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 106704 | gtex_brain_putamen_basal |
RS8128387 | 21 | 38556787 | TTC3 | ENSG00000182670.9 | 2.8e-10 | 0 | 111261 | gtex_brain_putamen_basal |
RS2835652 | 21 | 38557408 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 111882 | gtex_brain_putamen_basal |
RS2835653 | 21 | 38558636 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 113110 | gtex_brain_putamen_basal |
RS9980353 | 21 | 38558812 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 113286 | gtex_brain_putamen_basal |
RS2251952 | 21 | 38559711 | TTC3 | ENSG00000182670.9 | 2.179E-9 | 0 | 114185 | gtex_brain_putamen_basal |
rs6517405 | 21 | 38560334 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 114808 | gtex_brain_putamen_basal |
RS397867287 | 21 | 38561385 | TTC3 | ENSG00000182670.9 | 1.742E-10 | 0 | 115859 | gtex_brain_putamen_basal |
RS3787795 | 21 | 38562647 | TTC3 | ENSG00000182670.9 | 2.822e-10 | 0 | 117121 | gtex_brain_putamen_basal |
RS2835657 | 21 | 38565064 | TTC3 | ENSG00000182670.9 | 1.773E-10 | 0 | 119538 | gtex_brain_putamen_basal |
RS2835658 | 21 | 38565201 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 119675 | gtex_brain_putamen_basal |
RS9974494 | 21 | 38566566 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 121040 | gtex_brain_putamen_basal |
RS2835659 | 21 | 38567902 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 122376 | gtex_brain_putamen_basal |
RS7280251 | 21 | 38567911 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 122385 | gtex_brain_putamen_basal |
RS1053966 | 21 | 38568009 | TTC3 | ENSG00000182670.9 | 9.329e-12 | 0 | 122483 | gtex_brain_putamen_basal |
rs6579 | 21 | 38568308 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 122782 | gtex_brain_putamen_basal |
rs762139 | 21 | 38568475 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 122949 | gtex_brain_putamen_basal |
RS2835660 | 21 | 38568882 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 123356 | gtex_brain_putamen_basal |
RS2835662 | 21 | 38568967 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 123441 | gtex_brain_putamen_basal |
RS1034357 | 21 | 38571482 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 125956 | gtex_brain_putamen_basal |
RS2835664 | 21 | 38573429 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 127903 | gtex_brain_putamen_basal |
RS1053984 | 21 | 38574018 | TTC3 | ENSG00000182670.9 | 4.56e-11 | 0 | 128492 | gtex_brain_putamen_basal |
RS35220333 | 21 | 38574673 | TTC3 | ENSG00000182670.9 | 5.323e-7 | 0 | 129147 | gtex_brain_putamen_basal |
RS1063948 | 21 | 38574674 | TTC3 | ENSG00000182670.9 | 2.443E-9 | 0 | 129148 | gtex_brain_putamen_basal |
RS1063949 | 21 | 38574675 | TTC3 | ENSG00000182670.9 | 1.828E-9 | 0 | 129149 | gtex_brain_putamen_basal |
RS9982 | 21 | 38574680 | TTC3 | ENSG00000182670.9 | 4.611e-11 | 0 | 129154 | gtex_brain_putamen_basal |
RS2032063 | 21 | 38576657 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 131131 | gtex_brain_putamen_basal |
rs6517406 | 21 | 38577817 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 132291 | gtex_brain_putamen_basal |
RS7276711 | 21 | 38578189 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 132663 | gtex_brain_putamen_basal |
RS7276569 | 21 | 38578207 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 132681 | gtex_brain_putamen_basal |
RS2212742 | 21 | 38578685 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 133159 | gtex_brain_putamen_basal |
RS2835667 | 21 | 38579914 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 134388 | gtex_brain_putamen_basal |
RS2835668 | 21 | 38580151 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 134625 | gtex_brain_putamen_basal |
RS7277820 | 21 | 38580309 | TTC3 | ENSG00000182670.9 | 1.773E-10 | 0 | 134783 | gtex_brain_putamen_basal |
RS2835670 | 21 | 38581114 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 135588 | gtex_brain_putamen_basal |
RS2835671 | 21 | 38581125 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 135599 | gtex_brain_putamen_basal |
RS2835672 | 21 | 38581234 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 135708 | gtex_brain_putamen_basal |
RS11356622 | 21 | 38581422 | TTC3 | ENSG00000182670.9 | 2.902E-10 | 0 | 135896 | gtex_brain_putamen_basal |
RS2835674 | 21 | 38581522 | TTC3 | ENSG00000182670.9 | 2.839E-10 | 0 | 135996 | gtex_brain_putamen_basal |
RS2246285 | 21 | 38582431 | TTC3 | ENSG00000182670.9 | 1.773E-10 | 0 | 136905 | gtex_brain_putamen_basal |
RS2835675 | 21 | 38582815 | TTC3 | ENSG00000182670.9 | 1.064E-9 | 0 | 137289 | gtex_brain_putamen_basal |
RS34520132 | 21 | 38583133 | TTC3 | ENSG00000182670.9 | 5.029e-9 | 0 | 137607 | gtex_brain_putamen_basal |
RS9982429 | 21 | 38586334 | TTC3 | ENSG00000182670.9 | 1.451E-8 | 0 | 140808 | gtex_brain_putamen_basal |
RS9982431 | 21 | 38586339 | TTC3 | ENSG00000182670.9 | 3.182E-8 | 0 | 140813 | gtex_brain_putamen_basal |
RS200994614 | 21 | 38586845 | TTC3 | ENSG00000182670.9 | 2.804e-11 | 0 | 141319 | gtex_brain_putamen_basal |
RS9976501 | 21 | 38587837 | TTC3 | ENSG00000182670.9 | 2.729E-10 | 0 | 142311 | gtex_brain_putamen_basal |
RS9976360 | 21 | 38587860 | TTC3 | ENSG00000182670.9 | 2.459E-10 | 0 | 142334 | gtex_brain_putamen_basal |
RS3035179 | 21 | 38588281 | TTC3 | ENSG00000182670.9 | 2.773E-10 | 0 | 142755 | gtex_brain_putamen_basal |
RS9636914 | 21 | 38589732 | TTC3 | ENSG00000182670.9 | 6.992E-12 | 0 | 144206 | gtex_brain_putamen_basal |
RS2835676 | 21 | 38591311 | TTC3 | ENSG00000182670.9 | 1.418E-6 | 0 | 145785 | gtex_brain_putamen_basal |
第二节。转录组注释
一般基因表达(GTEX)
![无法使用](http://www.tjghsg.com/bioinfo/SZGR/GeneImg/TTC3_DE_GTEx.png)
Devlopment期间的基因表达(BrainCloud)
Footnote:
总共绘制了269个时间点,n = 38个胎儿样品(x = 1:38)。每个三角形代表一个时间点。
时间变化的基因表达(brainspan)
Footnote:
SC:亚皮质区域;SM:感觉运动区域;FC:额叶皮层;和TP:颞顶皮层
ST1:胎儿(13-26个概念后周),ST2:婴儿早期至童年(4个月至11年)和ST3:青春期至成年期(13-23年)
所示的栏表示表达分布的较低25%和上层25%。
大脑区域没有共表达基因
V.途径注释
路径名 | 路径大小 | # SZGR 2.0 genes in pathway | 信息 |
---|---|---|---|
中村肿瘤区周围与中央DN | 634 | 384 | 该途径中的所有SZGR 2.0基因 |
Onken Uveal黑色素瘤 | 783 | 507 | 该途径中的所有SZGR 2.0基因 |
Bertucci髓质与导管乳腺癌DN | 169 | 118 | 该途径中的所有SZGR 2.0基因 |
Sengupta鼻咽癌,LMP1 UP | 408 | 247 | 该途径中的所有SZGR 2.0基因 |
turashvili乳腺癌导管与小叶 | 21 | 14 | 该途径中的所有SZGR 2.0基因 |
Gary CD5目标 | 473 | 314 | 该途径中的所有SZGR 2.0基因 |
THUM收缩心力衰竭DN | 244 | 147 | 该途径中的所有SZGR 2.0基因 |
乳腺癌腔与基础 | 380 | 215 | 该途径中的所有SZGR 2.0基因 |
BASAKI YBX1 TARGETS DN | 384 | 230 | 该途径中的所有SZGR 2.0基因 |
Wang LMO4靶向 | 372 | 227 | 该途径中的所有SZGR 2.0基因 |
Mullighan MLL签名1 DN | 242 | 165 | 该途径中的所有SZGR 2.0基因 |
Mullighan MLL签名2 DN | 281 | 186 | 该途径中的所有SZGR 2.0基因 |
Tien肠益生菌24小时DN | 214 | 133 | 该途径中的所有SZGR 2.0基因 |
甲状腺癌的甲状腺癌间变性 | 722 | 443 | 该途径中的所有SZGR 2.0基因 |
hahtola兄弟姐妹fungoides CD4 DN | 116 | 71 | 该途径中的所有SZGR 2.0基因 |
阿霉素DN的Graessmann凋亡 | 1781年 | 1082 | 该途径中的所有SZGR 2.0基因 |
Gaussmann MLL AF4融合靶向G | 238 | 135 | 该途径中的所有SZGR 2.0基因 |
Berenjeno由Rhoa DN转变 | 394 | 258 | 该途径中的所有SZGR 2.0基因 |
PAX3 FOXO1融合的Ebauer目标 | 207 | 128 | 该途径中的所有SZGR 2.0基因 |
Mattioli多发性骨髓瘤亚组 | 16 | 7 | 该途径中的所有SZGR 2.0基因 |
Mohankumar TLX1靶向 | 414 | 287 | 该途径中的所有SZGR 2.0基因 |
Spielman淋巴细胞欧洲vs亚洲DN | 584 | 395 | 该途径中的所有SZGR 2.0基因 |
肺癌吸烟者 | 80 | 52 | 该途径中的所有SZGR 2.0基因 |
公园HSC和多能祖先 | 50 | 33 | 该途径中的所有SZGR 2.0基因 |
Sesto对UV C8的反应 | 72 | 56 | 该途径中的所有SZGR 2.0基因 |
阿尔茨海默氏病dn | 1237 | 837 | 该途径中的所有SZGR 2.0基因 |
阿尔茨海默氏症疾病初期DN | 165 | 106 | 该途径中的所有SZGR 2.0基因 |
coates巨噬细胞M1 vs M2向上 | 81 | 52 | 该途径中的所有SZGR 2.0基因 |
Mitsiades对aplidin DN的反应 | 249 | 165 | 该途径中的所有SZGR 2.0基因 |
张乳腺癌祖细胞 | 425 | 253 | 该途径中的所有SZGR 2.0基因 |
张乳腺癌祖细胞DN | 145 | 93 | 该途径中的所有SZGR 2.0基因 |
CADWELL ATG16L1靶向DN | 70 | 43 | 该途径中的所有SZGR 2.0基因 |
王肿瘤的侵入性DN | 210 | 128 | 该途径中的所有SZGR 2.0基因 |
Boyault肝癌子类G1 UP | 113 | 70 | 该途径中的所有SZGR 2.0基因 |
Yagi AML带8 21易位 | 368 | 247 | 该途径中的所有SZGR 2.0基因 |
Hoshida肝癌亚类S2 | 115 | 74 | 该途径中的所有SZGR 2.0基因 |
开罗肝脏开发 | 166 | 105 | 该途径中的所有SZGR 2.0基因 |
黄成人组织干细胞模块 | 721 | 492 | 该途径中的所有SZGR 2.0基因 |
li诱导了自然杀手DN | 116 | 83 | 该途径中的所有SZGR 2.0基因 |
Kim所有疾病Calb1 Corr Up | 548 | 370 | 该途径中的所有SZGR 2.0基因 |
VERHAAK GLIOBLASTOMA PRONEURAL | 177 | 132 | 该途径中的所有SZGR 2.0基因 |
Hirsch细胞转化特征dn | 103 | 67 | 该途径中的所有SZGR 2.0基因 |
Chicas RB1靶向衰老 | 572 | 352 | 该途径中的所有SZGR 2.0基因 |
Chicas RB1目标增长 | 243 | 155 | 该途径中的所有SZGR 2.0基因 |
Li DCP2绑定mRNA | 89 | 57 | 该途径中的所有SZGR 2.0基因 |
Gobert少突胶质细胞分化DN | 1080 | 713 | 该途径中的所有SZGR 2.0基因 |