Gene Page:YWHAG
Summary?
基因 | 7532 |
Symbol | YWHAG |
Synonyms | 14-3-3GAMMA|PPP1R170 |
Description | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma |
Reference | MIM:605356|HGNC:HGNC:12852|Ensembl:ENSG00000170027|HPRD:05639|Vega:Otthumg0000000022862 |
Gene type | 蛋白质编码 |
Map location | 7q11.23 |
Pascal p-value | 0.17 |
Sherlock p-value | 0.555 |
胎儿β | -0.188 |
DMG | 1(# studies) |
主持人 | Myers' cis & trans |
Support | INTRACELLULAR SIGNAL TRANSDUCTION G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2CDB.HUMAN_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.human_mGluR5 G2Cdb.human_mitochondria G2CDB.HUMANNRC G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet Darnell FMRP目标 |
Gene in Data Sources
Gene set name | Method of gene set | Description | 信息 |
---|---|---|---|
CV:PGCnp | Genome-wide Association Study | GWAS | |
DMG:Jaffe_2016 | 全基因组DNA甲基化分析 | This dataset includes 2,104 probes/CpGs associated with SZ patients (n=108) compared to 136 controls at Bonferroni-adjusted P < 0.05. | 1 |
PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenic,schizophrenias | 点击显示详细信息 |
go_annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 2 | |
Network | Shortest path distance of core genes in the Human protein-protein interaction network | Contribution to shortest path in PPI network: 1.9874 |
Section I. Genetics and epigenetics annotation
Differentially methylated gene
Probe | Chromosome | Position | Nearest gene | p(dis) | Beta (dis) | fdr(dis) | 学习 |
---|---|---|---|---|---|---|---|
CG16256922 | 7 | 75988606 | YWHAG | 2.77E-8 | -0.007 | 8.69e-6 | DMG:Jaffe_2016 |
eQTL annotation
SNP ID | Chromosome | Position | 主持人 | Gene Entrez ID | pvalue | QVALUE | TSS距离 | EQTL类型 |
---|---|---|---|---|---|---|---|---|
rs17712061 | chr5 | 18173266 | YWHAG | 7532 | 0.14 | trans |
第二节。转录组注释
一般基因表达(GTEX)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC:分皮质区域; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
第三节。基因本体论注释
分子功能 | 去学期 | 证据 | 神经关键字 | PubMed ID |
---|---|---|---|---|
去:0005159 | 胰岛素样生长因子受体结合 | IPI | 12482592 | |
去:0005080 | 蛋白激酶C结合 | IPI | 10433554 | |
去:0008426 | protein kinase C inhibitor activity | NAS | 10433554 | |
GO:0019904 | protein domain specific binding | IEA | - | |
生物过程 | 去学期 | 证据 | 神经关键字 | PubMed ID |
GO:0048167 | 突触可塑性的调节 | IMP | Synap (GO term level: 8) | 11824616 |
GO:0045664 | regulation of neuron differentiation | IMP | 神经元,神经发生(GO期限:9) | 11824616 |
去:0009966 | regulation of signal transduction | NAS | 10433554|10486217 | |
去:0006469 | negative regulation of protein kinase activity | NAS | 10433554 | |
去:0006605 | protein targeting | IEA | - | |
Cellular component | 去学期 | 证据 | 神经关键字 | PubMed ID |
去:0005737 | cytoplasm | IEA | - |
Section IV. Protein-protein interaction annotation
Interactors | Aliases B | Official full name B | 实验 | Source | PubMed ID |
---|---|---|---|---|---|
AKAP13 | AKAP-Lbc | BRX | FLJ11952 | FLJ43341 | HA-3 | Ht31 | LBC | PROTO-LB | PROTO-LBC | c-lbc | 激酶(PRKA)锚蛋白13 | - | HPRD | 15324660 |
ANKS1A | ANKS1 | KIAA0229 | MGC42354 | ankyrin repeat and sterile alpha motif domain containing 1A | - | HPRD | 15324660 |
ANKS1A | ANKS1 | KIAA0229 | MGC42354 | ankyrin repeat and sterile alpha motif domain containing 1A | Affinity Capture-MS | Biogrid | 17353931 |
阿拉夫 | A-RAF | ARAF1 | PKS2 | RAFA1 | V-RAF鼠肉瘤3611病毒癌基因同源物 | Affinity Capture-MS | Biogrid | 17353931 |
ARHGEF2 | DKFZp547L106 | DKFZp547P1516 | GEF | GEF-H1 | GEFH1 | KIAA0651 | LFP40 | P40 | rho/rac guanine nucleotide exchange factor (GEF) 2 | - | HPRD | 15324660 |
ATP5A1 | atp5a |atp5al2 |ATPM |MOM2 |OMR |ORM |HATP1 | ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle | - | HPRD | 15324660 |
BAIAP2 | bap2 |IRSP53 | BAI1相关蛋白2 | Affinity Capture-MS | Biogrid | 17353931 |
BCLAF1 | BTF |KIAA0164 |BK211L9.1 | BCl2相关转录因子1 | - | HPRD | 15324660 |
BRAF | B-RAF1 |Braf1 |FLJ95109 |MGC126806 |MGC138284 |Rafb1 | V-RAF鼠类肉瘤病毒癌基因同源物B1 | Affinity Capture-MS | Biogrid | 17353931 |
C22orf9 | - | chromosome 22 open reading frame 9 | Affinity Capture-MS | Biogrid | 17353931 |
CAPN3 | CANP3 | CANPL3 | LGMD2 | LGMD2A | MGC10767 | MGC11121 | MGC14344 | MGC4403 | nCL-1 | p94 | calpain 3, (p94) | - | HPRD | 15324660 |
CDC2L1 | cdc2l2 |CDK11 |CDK11-P110 |CDK11-P46 |CDK11-P58 |CLK-1 |FLJ59152 |PK58 |P58 |P58CDC2L1 | p58CLK-1 | cell division cycle 2-like 1 (PITSLRE proteins) | CDK11-P110与14-3-3-Gamma相互作用。 | BIND | 15883043 |
CGN | DKFZp779N1112 | FLJ39281 | KIAA1319 | cingulin | - | HPRD | 15324660 |
CGN | DKFZp779N1112 | FLJ39281 | KIAA1319 | cingulin | Affinity Capture-MS | Biogrid | 17353931 |
CLASP1 | DKFZp686D1968 | DKFZp686H2039 | FLJ33821 | FLJ41222 | KIAA0622 | MAST1 | MGC131895 | cytoplasmic linker associated protein 1 | Affinity Capture-MS | Biogrid | 17353931 |
CLK2 | MGC61500 | hCLK2 | CDC-like kinase 2 | - | HPRD | 15324660 |
CLK3 | FLJ22858 | PHCLK3 | PHCLK3/152 | CDC-like kinase 3 | - | HPRD | 15324660 |
CROP | luc7a |OA48-18 | cisplatin resistance-associated overexpressed protein | - | HPRD | 15324660 |
CRTC2 | RP11-422P24.6 | TORC2 | CREB regulated transcription coactivator 2 | Affinity Capture-MS | Biogrid | 17353931 |
CRTC2 | RP11-422P24.6 | TORC2 | CREB regulated transcription coactivator 2 | - | HPRD | 15324660 |
CSE1L | CAS | CSE1 | MGC117283 | MGC130036 | MGC130037 | XPO2 | CSE1 chromosome segregation 1-like (yeast) | - | HPRD | 15324660 |
DENND4A | FLJ33949 |irlb |KIAA0476 |mycpbp | DENN/MADD domain containing 4A | Affinity Capture-MS | Biogrid | 17353931 |
DFFA | DFF-45 | DFF1 | ICAD | DNA碎裂因子,45KDA,α多肽 | - | HPRD | 15324660 |
DISC1 | C1orf136 |FLJ13381 |FLJ21640 |FLJ25311 |FLJ41105 |KIAA0457 |SCZD9 | disrupted in schizophrenia 1 | - | HPRD,BioGRID | 12506198 |
DOCK7 | KIAA1771 | ZIR2 | dedicator of cytokinesis 7 | - | HPRD | 15324660 |
DYRK1A | dyrk |dyrk1 |HP86 |MNB |MNBH | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A | - | HPRD | 15324660 |
EDC3 | FLJ21128 | FLJ31777 | LSM16 | YJDC | YJEFN2 | enhancer of mRNA decapping 3 homolog (S. cerevisiae) | Affinity Capture-MS | Biogrid | 17353931 |
EEF1G | EF1G | GIG35 | eukaryotic translation elongation factor 1 gamma | - | HPRD | 15324660 |
EPB41L3 | 4.1b |dal-1 |dal1 |FLJ37633 |KIAA0987 | erythrocyte membrane protein band 4.1-like 3 | - | HPRD,BioGRID | 11996670 |
ERC1 | Cast2 | ELKS | KIAA1081 | MGC12974 | RAB6IP2 | ELKS/RAB6-interacting/CAST family member 1 | - | HPRD | 15324660 |
ERC1 | Cast2 | ELKS | KIAA1081 | MGC12974 | RAB6IP2 | ELKS/RAB6-interacting/CAST family member 1 | Affinity Capture-MS | Biogrid | 17353931 |
FAM82A2 | FAM82C | FLJ10579 | RMD3 | hRMD-3 | ptpip51 | family with sequence similarity 82, member A2 | Affinity Capture-MS | Biogrid | 17353931 |
FARP2 | FIR | FRG | KIAA0793 | PLEKHC3 | Ferm,Rhogef和Pleckstrin域蛋白2 | - | HPRD | 15324660 |
FOXO1 | FKH1 | FKHR | FOXO1A | forkhead box O1 | - | HPRD,BioGRID | 11237865 |
FRMD6 | C14orf31 | EX1 | MGC17921 | Willin | c14_5320 | FERM域包含6 | - | HPRD | 15324660 |
炸弹 | DKFZp686E205 | FLJ16177 | KIAA0826 | FRY-like | Affinity Capture-MS | Biogrid | 17353931 |
GBF1 | FLJ21263 |FLJ21500 |KIAA0248 |MGC134877 |MGC134878 | golgi-specific brefeldin A resistance factor 1 | Affinity Capture-MS | Biogrid | 17353931 |
HDAC4 | HA6116 | HD4 | HDAC-A | HDACA | KIAA0288 | histone deacetylase 4 | 重构的复合物 | Biogrid | 11504882 |
IGF1R | CD221 | IGFIR | JTK13 | MGC142170 | MGC142172 | MGC18216 | insulin-like growth factor 1 receptor | Affinity Capture-MS | Biogrid | 17353931 |
IRS2 | - | insulin receptor substrate 2 | Affinity Capture-MS | Biogrid | 17353931 |
KIAA0408 | FLJ43995 | RP3-403A15.2 | KIAA0408 | Two-hybrid | Biogrid | 16189514 |
KIF1B | CMT2 | CMT2A | CMT2A1 | FLJ23699 | HMSNII | KIAA0591 | KIAA1448 | KLP | MGC134844 | kinesin family member 1B | - | HPRD | 15324660 |
KIF1C | KIAA0706 |LTXS1 | kinesin family member 1C | - | HPRD,BioGRID | 10559254 |
KIF23 | cho1 |knsl5 |MKLP-1 |MKLP1 | kinesin family member 23 | Affinity Capture-MS | Biogrid | 17353931 |
KIF23 | cho1 |knsl5 |MKLP-1 |MKLP1 | kinesin family member 23 | - | HPRD | 15324660 |
KIF5B | KINH | KNS | KNS1 | UKHC | kinesin family member 5B | Affinity Capture-MS | Biogrid | 17353931 |
KIF5C | FLJ44735 | KIAA0531 | KINN | MGC111478 | NKHC | NKHC-2 | NKHC2 | kinesin family member 5C | Affinity Capture-MS | Biogrid | 17353931 |
KLC1 | KLC | KNS2 | KNS2A | MGC15245 | kinesin light chain 1 | Affinity Capture-MS | Biogrid | 17353931 |
KLC2 | FLJ12387 | kinesin light chain 2 | Affinity Capture-MS | Biogrid | 17353931 |
KLC3 | KLC2 | KLC2L | KLCt | KNS2B | kinesin light chain 3 | Affinity Capture-MS | Biogrid | 17353931 |
KLC3 | KLC2 | KLC2L | KLCt | KNS2B | kinesin light chain 3 | - | HPRD | 15324660 |
KLC4 | KNSL8 | MGC111777 | bA387M24.3 | kinesin light chain 4 | Affinity Capture-MS | Biogrid | 17353931 |
KRT18 | CYK18 | K18 | keratin 18 | - | HPRD | 9524113 |
KRT31 | HA1 | Ha-1 | KRTHA1 | MGC138630 | hHa1 | keratin 31 | Affinity Capture-MS | Biogrid | 17353931 |
KRT33B | HA3II | Ha-3II | KRTHA3A | KRTHA3B | hHa3-II | keratin 33B | Affinity Capture-MS | Biogrid | 17353931 |
KRT85 | HB5 | Hb-5 | KRTHB5 | hHb5 | keratin 85 | Affinity Capture-MS | Biogrid | 17353931 |
LARP1 | KIAA0731 | LARP | MGC19556 | La ribonucleoprotein domain family, member 1 | Affinity Capture-MS | Biogrid | 17353931 |
LARP1 | KIAA0731 | LARP | MGC19556 | La ribonucleoprotein domain family, member 1 | - | HPRD | 15324660 |
LBR | DHCR14B | FLJ43126 | LMN2R | MGC9041 | PHA | 椎板B受体 | Affinity Capture-MS | Biogrid | 17353931 |
LSR | Lisch7 |MGC10659 |MGC48312 |MGC48503 | lipolysis stimulated lipoprotein receptor | - | HPRD | 15324660 |
LUC7L2 | CGI-59 |CGI-74 |FLJ10657 |luc7b2 | LUC7-like 2 (S. cerevisiae) | Affinity Capture-MS | Biogrid | 17353931 |
LUC7L2 | CGI-59 |CGI-74 |FLJ10657 |luc7b2 | LUC7-like 2 (S. cerevisiae) | - | HPRD | 15324660 |
MAP3K2 | MEKK2 | MEKK2B | 有丝分裂原激活的蛋白激酶激酶激酶2 | - | HPRD | 15324660 |
MAP3K3 | MAPKKK3 | MEKK3 | 有丝分裂原激活的蛋白激酶激酶激酶3 | Affinity Capture-MS | Biogrid | 14743216 |
MARK2 | emk1 |MGC99619 |par-1 |par1b | MAP/microtubule affinity-regulating kinase 2 | Affinity Capture-MS | Biogrid | 17353931 |
MARK3 | ctak1 |KP78 |par1a | MAP/microtubule affinity-regulating kinase 3 | Affinity Capture-MS | Biogrid | 17353931 |
micall1 | DKFZP686M2226 |FLJ45921 |KIAA1668 |mical-l1 |mirab13 | MICAL-like 1 | - | HPRD | 15324660 |
mllt4 | AF-6 |AF6 |Afadin |FLJ34371 |RP3-431P23.3 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 | Affinity Capture-MS | Biogrid | 17353931 |
mprip | KIAA0864 | M-RIP | RHOIP3 | p116Rip | myosin phosphatase Rho interacting protein | Affinity Capture-MS | Biogrid | 17353931 |
mprip | KIAA0864 | M-RIP | RHOIP3 | p116Rip | myosin phosphatase Rho interacting protein | - | HPRD | 15324660 |
mycbp2 | DKFZp686M08244 | FLJ10106 | FLJ13826 | FLJ21597 | FLJ21646 | KIAA0916 | PAM | MYC binding protein 2 | - | HPRD | 15324660 |
OSBPL3 | DKFZp667P1518 | KIAA0704 | MGC21526 | ORP-3 | ORP3 | OSBP3 | oxysterol binding protein-like 3 | Affinity Capture-MS | Biogrid | 17353931 |
PAK4 | - | P21蛋白(CDC42/RAC)激活激酶4 | Affinity Capture-MS | Biogrid | 17353931 |
PARD3 | ASIP | Baz | Bazooka | FLJ21015 | PAR3 | PAR3alpha | PARD3A | SE2-5L16 | SE2-5LT1 | SE2-5T2 | PAR-3分区有缺陷的3个同源物(C. exelelans) | Affinity Capture-MS | Biogrid | 17353931 |
pard3b | ALS2CR19 | MGC16131 | PAR3B | PAR3L | PAR3LC | PAR3beta | Par3Lb | par-3 partitioning defective 3 homolog B (C. elegans) | - | HPRD | 15324660 |
PCTK1 | FLJ16665 | PCTAIRE | PCTAIRE1 | PCTGAIRE | PCTAIRE protein kinase 1 | - | HPRD,BioGRID | 12154078 |
PI4KB | pi4k-beta |pi4kiiibeta |pi4kbeta |pik4cb |PI4K92 | phosphatidylinositol 4-kinase, catalytic, beta | Affinity Capture-MS | Biogrid | 17353931 |
PI4KB | pi4k-beta |pi4kiiibeta |pi4kbeta |pik4cb |PI4K92 | phosphatidylinositol 4-kinase, catalytic, beta | - | HPRD | 15324660 |
PNN | DRS | SDK3 | memA | pinin | pinin, desmosome associated protein | - | HPRD | 15324660 |
PPFIBP1 | L2 | hSGT2 | hSgt2p | PTPRF interacting protein, binding protein 1 (liprin beta 1) | Affinity Capture-MS | Biogrid | 17353931 |
PPIG | 汽车-CYP |CYP |MGC133241 |SRCYP | peptidylprolyl isomerase G (cyclophilin G) | - | HPRD | 15324660 |
PRKCA | AAG6 |MGC129900 |MGC129901 |PKC-Alpha |PKCA |Prkaca | protein kinase C, alpha | - | HPRD,BioGRID | 10433554 |
PRKCB | MGC41878 |pkc-beta |PKCB |prkcb1 |PRKCB2 | protein kinase C, beta | - | HPRD,BioGRID | 10433554 |
PRKCD | May1 |MGC49908 |PKCD |npkc-delta | 蛋白激酶C,三角洲 | - | HPRD,BioGRID | 10433554 |
PRKCG | MGC57564 | PKC-gamma | PKCC | PKCG | SCA14 | 蛋白激酶C,伽玛 | - | HPRD,BioGRID | 10433554 |
PRKCQ | MGC126514 |MGC141919 |prkct |npkc-theta | 蛋白激酶C,theta | - | HPRD,BioGRID | 10433554 |
PRKCZ | PKC-ZETA | PKC2 | protein kinase C, zeta | 亲和力捕获 - 韦斯特恩 | Biogrid | 10620507 |
PRPF19 | NMP200 |PRP19 |PSO4 |snev |Ubox4 |HPSO4 | PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) | - | HPRD | 15324660 |
PRPF40A | FBP-11 | FBP11 | FLAF1 | FLJ20585 | FNBP3 | HIP10 | HYPA | NY-REN-6 | PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) | - | HPRD | 15324660 |
PRPF4B | KIAA0536 |pr4h |prp4 |prp4h |prp4k |DJ1013A10.1 | PRP4 pre-mRNA processing factor 4 homolog B (yeast) | Affinity Capture-MS | Biogrid | 17353931 |
Rab11fip2 | KIAA0941 | Rab11-FIP2 | nRip11 | RAB11 family interacting protein 2 (class I) | - | HPRD | 15324660 |
RABEP1 | RAB5EP | RABPT5 | Rabaptin,Rab GTPase结合效应蛋白1 | Affinity Capture-MS | Biogrid | 17353931 |
Rabgef1 | FLJ32302 | RABEX5 | rabex-5 | RAB guanine nucleotide exchange factor (GEF) 1 | - | HPRD | 15324660 |
Rabgef1 | FLJ32302 | RABEX5 | rabex-5 | RAB guanine nucleotide exchange factor (GEF) 1 | Affinity Capture-MS | Biogrid | 17353931 |
RACGAP1 | HsCYK-4 | ID-GAP | MgcRacGAP | Rac GTPase activating protein 1 | Affinity Capture-MS | Biogrid | 17353931 |
RAF1 | 克拉夫|NS5 |RAF-1 |C-Raf | v-raf-1 murine leukemia viral oncogene homolog 1 | - | HPRD | 8702721|10433554 |
RAF1 | 克拉夫|NS5 |RAF-1 |C-Raf | v-raf-1 murine leukemia viral oncogene homolog 1 | Affinity Capture-MS 亲和力捕获 - 韦斯特恩 |
Biogrid | 10433554|10620507 |17353931 |
RAI14 | DKFZP564G013 |KIAA1334 |Norpeg |RAI13 | retinoic acid induced 14 | Affinity Capture-MS | Biogrid | 17353931 |
RALGPS2 | FLJ10244 | FLJ25604 | KIAA0351 | dJ595C2.1 | Ral GEF with PH domain and SH3 binding motif 2 | - | HPRD | 15324660 |
RASAL2 | MGC129919 | nGAP | RAS protein activator like 2 | - | HPRD | 15324660 |
SAMD4A | DKFZp434H0350 | KIAA1053 | SAMD4 | SMG | SMGA | Smaug | Smaug1 | sterile alpha motif domain containing 4A | - | HPRD | 15324660 |
SAMD4B | FLJ10211 | MGC99832 | SMGB | sterile alpha motif domain containing 4B | - | HPRD | 15324660 |
SAMD4B | FLJ10211 | MGC99832 | SMGB | sterile alpha motif domain containing 4B | Affinity Capture-MS | Biogrid | 17353931 |
SF3B3 | KIAA0017 | RSE1 | SAP130 | SF3b130 | STAF130 | 剪接因子3B,亚基3,130kDa | - | HPRD | 15324660 |
SFN | YWHAS | Stratifin | Affinity Capture-MS | Biogrid | 15778465 |
SH3BP5L | FLJ33845 | KIAA1720 | SH3结合结构域蛋白5样 | - | HPRD | 15324660 |
SHCBP1 | FLJ22009 | MGC26900 | PAL | SHC SH2-domain binding protein 1 | - | HPRD | 15324660 |
SHCBP1 | FLJ22009 | MGC26900 | PAL | SHC SH2-domain binding protein 1 | Affinity Capture-MS | Biogrid | 17353931 |
SMCR7L | FLJ20232 |HSU79252 |DJ1104E15.3 | Smith-Magenis syndrome chromosome region, candidate 7-like | - | HPRD | 15324660 |
SNRNP200 | ASCC3L1 |brr2 |Helic2 |U5-200KD | small nuclear ribonucleoprotein 200kDa (U5) | Affinity Capture-MS | Biogrid | 17353931 |
儿子 | BASS1 | C21orf50 | DBP-5 | FLJ21099 | FLJ33914 | KIAA1019 | NREBP | SON3 | 儿子DNA binding protein | - | HPRD | 15324660 |
儿子 | BASS1 | C21orf50 | DBP-5 | FLJ21099 | FLJ33914 | KIAA1019 | NREBP | SON3 | 儿子DNA binding protein | Affinity Capture-MS | Biogrid | 17353931 |
src | ASV | SRC1 | c-SRC | p60-Src | V-SRC肉瘤(Schmidt-Ruppin A-2)病毒癌基因同源物(Avian) | - | HPRD | 8702721 |
SRPK1 | SFRSK1 | SFRS protein kinase 1 | - | HPRD | 15324660 |
SRRM1 | 160-KD | MGC39488 | POP101 | SRM160 | serine/arginine repetitive matrix 1 | - | HPRD | 15324660 |
SRRM2 | 300-KD | CWF21 | DKFZp686O15166 | FLJ21926 | FLJ22250 | KIAA0324 | MGC40295 | SRL300 | SRm300 | serine/arginine repetitive matrix 2 | Affinity Capture-MS | Biogrid | 17353931 |
TBC1D1 | KIAA1108 |TBC |TBC1 | TBC1(tre-2/USP6, BUB2, cdc16) domain family, member 1 | - | HPRD | 15324660 |
TJP2 | MGC26306 |x104 |ZO-2 |ZO2 | tight junction protein 2 (zona occludens 2) | - | HPRD | 15324660 |
TJP2 | MGC26306 |x104 |ZO-2 |ZO2 | tight junction protein 2 (zona occludens 2) | Affinity Capture-MS | Biogrid | 17353931 |
TNFAIP3 | A20 | MGC104522 | MGC138687 | MGC138688 | OTUD7C | TNFA1P2 | tumor necrosis factor, alpha-induced protein 3 | - | HPRD | 8702721 |
TSC1 | KIAA0243 | LAM | MGC86987 | TSC | tuberous sclerosis 1 | Hamartin与14-3-3-Gamma相互作用。这种相互作用是建立在人麻和小鼠14-3-3-gamma同工型之间的相互作用的模型。 | BIND | 12176984 |
TSC2 | FLJ43106 | LAM | TSC4 | tuberous sclerosis 2 | - | HPRD | 12438239 |
TSC2 | FLJ43106 | LAM | TSC4 | tuberous sclerosis 2 | 肿瘤抑制蛋白结核蛋白与14-3-3-GAMMA同工型相互作用。这种相互作用是根据人类结核素和小鼠14-3-3-gamma之间的相互作用建模的。 | BIND | 12176984 |
UCP2 | BMIQ4 | SLC25A8 | UCPH | 解偶联蛋白2(线粒体,质子载体) | UCP2interacts with 14.3.3-gamma. | BIND | 10785390 |
UCP3 | SLC25A9 | uncoupling protein 3 (mitochondrial, proton carrier) | UCP3interacts with 14.3.3-gamma. | BIND | 10785390 |
ZFP36 | G0S24 | GOS24 | NUP475 | RNF162A | TIS11 | TTP | zinc finger protein 36, C3H type, homolog (mouse) | - | HPRD | 11886850 |
ZNF295 | DKFZp781N1974 | ZBTB21 | zinc finger protein 295 | - | HPRD | 15324660 |
Section V. Pathway annotation
Section VI. microRNA annotation
miRNA family | Target position | miRNA ID | mirna seq | ||
---|---|---|---|---|---|
UTR开始 | UTR结束 | 匹配方法 | |||
mir-132/212 | 232 | 238 | m8 | hsa-miR-212SZ | UAACAGUCUCCAGUCACGGCC |
HSA-MIR-132brain | UAACAGUCUACAGCCAUGGUCG | ||||
miR-135 | 623 | 629 | m8 | HSA-MIR-135A | UAUGGCUUUUUAUUCCUAUGUGA |
HSA-MIR-135B | UAUGGCUUUUCAUUCCUAUGUG | ||||
HSA-MIR-135A | UAUGGCUUUUUAUUCCUAUGUGA | ||||
HSA-MIR-135B | UAUGGCUUUUCAUUCCUAUGUG | ||||
miR-139 | 2283 | 2289 | m8 | HSA-MIR-139brain | ucuacagugcacgugucu |
miR-141/200a | 2490 | 2497 | 1A,m8 | HSA-MIR-141 | UAACACUGUCUGGUAAAGAUGG |
hsa-miR-200a | UAACACUGUCUGGUAACGAUGU | ||||
miR-145 | 1993 | 1999 | 1A | HSA-MIR-145 | GUCCAGUUUUCCCAGGAAUCCCUU |
miR-181 | 2722 | 2728 | m8 | HSA-MIR-181Abrain | AACAUUCAACGCUGUCGGUGAGU |
HSA-MIR-181BSZ | AACAUUCAUUGCUGUCGGUGGG | ||||
HSA-MIR-181Cbrain | AACAUUCAACCUGUCGGUGAGU | ||||
HSA-MIR-181Dbrain | AACAUUCAUUGUUGUCGGUGGGUU | ||||
miR-182 | 158 | 165 | 1A,m8 | HSA-MIR-182 | uuuggcaaugguagaacucaca |
miR-200bc/429 | 590 | 596 | m8 | hsa-miR-200b | UAAUACUGCCUGGUAAUGAUGAC |
hsa-miR-200c | UAAUACUGCCGGGUAAUGAUGG | ||||
hsa-miR-429 | UAAUACUGUCUGGUAAAACCGU | ||||
hsa-miR-200b | UAAUACUGCCUGGUAAUGAUGAC | ||||
hsa-miR-200c | UAAUACUGCCGGGUAAUGAUGG | ||||
hsa-miR-429 | UAAUACUGUCUGGUAAAACCGU | ||||
mir-204/211 | 88 | 94 | m8 | hsa-miR-204brain | UUCCCUUUGUCAUCCUAUGCCU |
hsa-miR-211 | UUCCCUUUGUCAUCCUUCGCCU | ||||
miR-217 | 2442 | 2448 | m8 | hsa-miR-217 | UACUGCAUCAGGAACUGAUUGGAU |
hsa-miR-217 | UACUGCAUCAGGAACUGAUUGGAU | ||||
mir-221/222 | 2737 | 2743 | m8 | hsa-miR-221brain | agcuacauugucugugggggguc |
hsa-miR-222brain | agcuacaucuggcuacugggucuc | ||||
miR-23 | 2724 | 2730 | m8 | hsa-miR-23abrain | AUCACAUUGCCAGGGAUUUCC |
hsa-miR-23bbrain | AUCACAUUGCCAGGGAUUACC | ||||
miR-30-5p | 585 | 591 | 1A | HSA-MIR-30A-5P | UGUAAACAUCCUCGACUGGAAG |
hsa-miR-30cbrain | UGUAAACAUCCUACACUCUCAGC | ||||
hsa-miR-30dSZ | UGUAAACAUCCCCGACUGGAAG | ||||
hsa-miR-30bSZ | uguaaacauccuaccucucagcu | ||||
hsa-miR-30e-5p | UGUAAACAUCCUUGACUGGA | ||||
mir-323 | 2724 | 2730 | 1A | hsa-miR-323brain | GCACAUUACACGGUCGACCUCU |
miR-324-3p | 2607 | 2613 | 1A | hsa-miR-324-3p | CCACUGCCCCAGGUGCUGCUGG |
mir-433-3p | 2718 | 2725 | 1A,m8 | hsa-miR-433brain | aucaugauggggcuccucggugu |
miR-485-5p | 212 | 219 | 1A,m8 | hsa-miR-485-5p | AGAGGCUGGCCGUGAUGAAUUC |
mir-96 | 159 | 165 | 1A | HSA-MIR-96brain | UUUGGCACUAGCACAUUUUUGC |