Summary
基因 7532
Symbol YWHAG
Synonyms 14-3-3GAMMA|PPP1R170
Description tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma
Reference MIM:605356|HGNC:HGNC:12852|Ensembl:ENSG00000170027|HPRD:05639|Vega:Otthumg0000000022862
Gene type 蛋白质编码
Map location 7q11.23
Pascal p-value 0.17
Sherlock p-value 0.555
胎儿β -0.188
DMG 1(# studies)
主持人 Myers' cis & trans
Support INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2CDB.HUMAN_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_mitochondria
G2CDB.HUMANNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP目标

Gene in Data Sources
Gene set name Method of gene set Description 信息
CV:PGCnp Genome-wide Association Study GWAS
DMG:Jaffe_2016 全基因组DNA甲基化分析 This dataset includes 2,104 probes/CpGs associated with SZ patients (n=108) compared to 136 controls at Bonferroni-adjusted P < 0.05. 1
PMID:cooccur High-throughput literature-search Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included.
Literature High-throughput literature-search Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenic,schizophrenias 点击显示详细信息
go_annotation Mapping neuro-related keywords to Gene Ontology annotations Hits with neuro-related keywords: 2
Network Shortest path distance of core genes in the Human protein-protein interaction network Contribution to shortest path in PPI network: 1.9874

Section I. Genetics and epigenetics annotation

@Differentially methylated gene

Probe Chromosome Position Nearest gene p(dis) Beta (dis) fdr(dis) 学习
CG16256922 7 75988606 YWHAG 2.77E-8 -0.007 8.69e-6 DMG:Jaffe_2016

@eQTL annotation

SNP ID Chromosome Position 主持人 Gene Entrez ID pvalue QVALUE TSS距离 EQTL类型
rs17712061 chr5 18173266 YWHAG 7532 0.14 trans

第二节。转录组注释

一般基因表达(GTEX)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC:分皮质区域; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


第三节。基因本体论注释

分子功能 去学期 证据 神经关键字 PubMed ID
去:0005159 胰岛素样生长因子受体结合 IPI 12482592
去:0005080 蛋白激酶C结合 IPI 10433554
去:0008426 protein kinase C inhibitor activity NAS 10433554
GO:0019904 protein domain specific binding IEA -
生物过程 去学期 证据 神经关键字 PubMed ID
GO:0048167 突触可塑性的调节 IMP Synap (GO term level: 8) 11824616
GO:0045664 regulation of neuron differentiation IMP 神经元,神经发生(GO期限:9) 11824616
去:0009966 regulation of signal transduction NAS 10433554|10486217
去:0006469 negative regulation of protein kinase activity NAS 10433554
去:0006605 protein targeting IEA -
Cellular component 去学期 证据 神经关键字 PubMed ID
去:0005737 cytoplasm IEA -

Section IV. Protein-protein interaction annotation

Interactors Aliases B Official full name B 实验 Source PubMed ID
AKAP13 AKAP-Lbc | BRX | FLJ11952 | FLJ43341 | HA-3 | Ht31 | LBC | PROTO-LB | PROTO-LBC | c-lbc 激酶(PRKA)锚蛋白13 - HPRD 15324660
ANKS1A ANKS1 | KIAA0229 | MGC42354 ankyrin repeat and sterile alpha motif domain containing 1A - HPRD 15324660
ANKS1A ANKS1 | KIAA0229 | MGC42354 ankyrin repeat and sterile alpha motif domain containing 1A Affinity Capture-MS Biogrid 17353931
阿拉夫 A-RAF | ARAF1 | PKS2 | RAFA1 V-RAF鼠肉瘤3611病毒癌基因同源物 Affinity Capture-MS Biogrid 17353931
ARHGEF2 DKFZp547L106 | DKFZp547P1516 | GEF | GEF-H1 | GEFH1 | KIAA0651 | LFP40 | P40 rho/rac guanine nucleotide exchange factor (GEF) 2 - HPRD 15324660
ATP5A1 atp5a |atp5al2 |ATPM |MOM2 |OMR |ORM |HATP1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle - HPRD 15324660
BAIAP2 bap2 |IRSP53 BAI1相关蛋白2 Affinity Capture-MS Biogrid 17353931
BCLAF1 BTF |KIAA0164 |BK211L9.1 BCl2相关转录因子1 - HPRD 15324660
BRAF B-RAF1 |Braf1 |FLJ95109 |MGC126806 |MGC138284 |Rafb1 V-RAF鼠类肉瘤病毒癌基因同源物B1 Affinity Capture-MS Biogrid 17353931
C22orf9 - chromosome 22 open reading frame 9 Affinity Capture-MS Biogrid 17353931
CAPN3 CANP3 | CANPL3 | LGMD2 | LGMD2A | MGC10767 | MGC11121 | MGC14344 | MGC4403 | nCL-1 | p94 calpain 3, (p94) - HPRD 15324660
CDC2L1 cdc2l2 |CDK11 |CDK11-P110 |CDK11-P46 |CDK11-P58 |CLK-1 |FLJ59152 |PK58 |P58 |P58CDC2L1 | p58CLK-1 cell division cycle 2-like 1 (PITSLRE proteins) CDK11-P110与14-3-3-Gamma相互作用。 BIND 15883043
CGN DKFZp779N1112 | FLJ39281 | KIAA1319 cingulin - HPRD 15324660
CGN DKFZp779N1112 | FLJ39281 | KIAA1319 cingulin Affinity Capture-MS Biogrid 17353931
CLASP1 DKFZp686D1968 | DKFZp686H2039 | FLJ33821 | FLJ41222 | KIAA0622 | MAST1 | MGC131895 cytoplasmic linker associated protein 1 Affinity Capture-MS Biogrid 17353931
CLK2 MGC61500 | hCLK2 CDC-like kinase 2 - HPRD 15324660
CLK3 FLJ22858 | PHCLK3 | PHCLK3/152 CDC-like kinase 3 - HPRD 15324660
CROP luc7a |OA48-18 cisplatin resistance-associated overexpressed protein - HPRD 15324660
CRTC2 RP11-422P24.6 | TORC2 CREB regulated transcription coactivator 2 Affinity Capture-MS Biogrid 17353931
CRTC2 RP11-422P24.6 | TORC2 CREB regulated transcription coactivator 2 - HPRD 15324660
CSE1L CAS | CSE1 | MGC117283 | MGC130036 | MGC130037 | XPO2 CSE1 chromosome segregation 1-like (yeast) - HPRD 15324660
DENND4A FLJ33949 |irlb |KIAA047​​6 |mycpbp DENN/MADD domain containing 4A Affinity Capture-MS Biogrid 17353931
DFFA DFF-45 | DFF1 | ICAD DNA碎裂因子,45KDA,α多肽 - HPRD 15324660
DISC1 C1orf136 |FLJ13381 |FLJ21640 |FLJ25311 |FLJ41105 |KIAA0457 |SCZD9 disrupted in schizophrenia 1 - HPRD,BioGRID 12506198
DOCK7 KIAA1771 | ZIR2 dedicator of cytokinesis 7 - HPRD 15324660
DYRK1A dyrk |dyrk1 |HP86 |MNB |MNBH dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A - HPRD 15324660
EDC3 FLJ21128 | FLJ31777 | LSM16 | YJDC | YJEFN2 enhancer of mRNA decapping 3 homolog (S. cerevisiae) Affinity Capture-MS Biogrid 17353931
EEF1G EF1G | GIG35 eukaryotic translation elongation factor 1 gamma - HPRD 15324660
EPB41L3 4.1b |dal-1 |dal1 |FLJ37633 |KIAA0987 erythrocyte membrane protein band 4.1-like 3 - HPRD,BioGRID 11996670
ERC1 Cast2 | ELKS | KIAA1081 | MGC12974 | RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 - HPRD 15324660
ERC1 Cast2 | ELKS | KIAA1081 | MGC12974 | RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 Affinity Capture-MS Biogrid 17353931
FAM82A2 FAM82C | FLJ10579 | RMD3 | hRMD-3 | ptpip51 family with sequence similarity 82, member A2 Affinity Capture-MS Biogrid 17353931
FARP2 FIR | FRG | KIAA0793 | PLEKHC3 Ferm,Rhogef和Pleckstrin域蛋白2 - HPRD 15324660
FOXO1 FKH1 | FKHR | FOXO1A forkhead box O1 - HPRD,BioGRID 11237865
FRMD6 C14orf31 | EX1 | MGC17921 | Willin | c14_5320 FERM域包含6 - HPRD 15324660
炸弹 DKFZp686E205 | FLJ16177 | KIAA0826 FRY-like Affinity Capture-MS Biogrid 17353931
GBF1 FLJ21263 |FLJ21500 |KIAA0248 |MGC134877 |MGC134878 golgi-specific brefeldin A resistance factor 1 Affinity Capture-MS Biogrid 17353931
HDAC4 HA6116 | HD4 | HDAC-A | HDACA | KIAA0288 histone deacetylase 4 重构的复合物 Biogrid 11504882
IGF1R CD221 | IGFIR | JTK13 | MGC142170 | MGC142172 | MGC18216 insulin-like growth factor 1 receptor Affinity Capture-MS Biogrid 17353931
IRS2 - insulin receptor substrate 2 Affinity Capture-MS Biogrid 17353931
KIAA0408 FLJ43995 | RP3-403A15.2 KIAA0408 Two-hybrid Biogrid 16189514
KIF1B CMT2 | CMT2A | CMT2A1 | FLJ23699 | HMSNII | KIAA0591 | KIAA1448 | KLP | MGC134844 kinesin family member 1B - HPRD 15324660
KIF1C KIAA0706 |LTXS1 kinesin family member 1C - HPRD,BioGRID 10559254
KIF23 cho1 |knsl5 |MKLP-1 |MKLP1 kinesin family member 23 Affinity Capture-MS Biogrid 17353931
KIF23 cho1 |knsl5 |MKLP-1 |MKLP1 kinesin family member 23 - HPRD 15324660
KIF5B KINH | KNS | KNS1 | UKHC kinesin family member 5B Affinity Capture-MS Biogrid 17353931
KIF5C FLJ44735 | KIAA0531 | KINN | MGC111478 | NKHC | NKHC-2 | NKHC2 kinesin family member 5C Affinity Capture-MS Biogrid 17353931
KLC1 KLC | KNS2 | KNS2A | MGC15245 kinesin light chain 1 Affinity Capture-MS Biogrid 17353931
KLC2 FLJ12387 kinesin light chain 2 Affinity Capture-MS Biogrid 17353931
KLC3 KLC2 | KLC2L | KLCt | KNS2B kinesin light chain 3 Affinity Capture-MS Biogrid 17353931
KLC3 KLC2 | KLC2L | KLCt | KNS2B kinesin light chain 3 - HPRD 15324660
KLC4 KNSL8 | MGC111777 | bA387M24.3 kinesin light chain 4 Affinity Capture-MS Biogrid 17353931
KRT18 CYK18 | K18 keratin 18 - HPRD 9524113
KRT31 HA1 | Ha-1 | KRTHA1 | MGC138630 | hHa1 keratin 31 Affinity Capture-MS Biogrid 17353931
KRT33B HA3II | Ha-3II | KRTHA3A | KRTHA3B | hHa3-II keratin 33B Affinity Capture-MS Biogrid 17353931
KRT85 HB5 | Hb-5 | KRTHB5 | hHb5 keratin 85 Affinity Capture-MS Biogrid 17353931
LARP1 KIAA0731 | LARP | MGC19556 La ribonucleoprotein domain family, member 1 Affinity Capture-MS Biogrid 17353931
LARP1 KIAA0731 | LARP | MGC19556 La ribonucleoprotein domain family, member 1 - HPRD 15324660
LBR DHCR14B | FLJ43126 | LMN2R | MGC9041 | PHA 椎板B受体 Affinity Capture-MS Biogrid 17353931
LSR Lisch7 |MGC10659 |MGC48312 |MGC48503 lipolysis stimulated lipoprotein receptor - HPRD 15324660
LUC7L2 CGI-59 |CGI-74 |FLJ10657 |luc7b2 LUC7-like 2 (S. cerevisiae) Affinity Capture-MS Biogrid 17353931
LUC7L2 CGI-59 |CGI-74 |FLJ10657 |luc7b2 LUC7-like 2 (S. cerevisiae) - HPRD 15324660
MAP3K2 MEKK2 | MEKK2B 有丝分裂原激活的蛋白激酶激酶激酶2 - HPRD 15324660
MAP3K3 MAPKKK3 | MEKK3 有丝分裂原激活的蛋白激酶激酶激酶3 Affinity Capture-MS Biogrid 14743216
MARK2 emk1 |MGC99619 |par-1 |par1b MAP/microtubule affinity-regulating kinase 2 Affinity Capture-MS Biogrid 17353931
MARK3 ctak1 |KP78 |par1a MAP/microtubule affinity-regulating kinase 3 Affinity Capture-MS Biogrid 17353931
micall1 DKFZP686M2226 |FLJ45921 |KIAA1668 |mical-l1 |mirab13 MICAL-like 1 - HPRD 15324660
mllt4 AF-6 |AF6 |Afadin |FLJ34371 |RP3-431P23.3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 Affinity Capture-MS Biogrid 17353931
mprip KIAA0864 | M-RIP | RHOIP3 | p116Rip myosin phosphatase Rho interacting protein Affinity Capture-MS Biogrid 17353931
mprip KIAA0864 | M-RIP | RHOIP3 | p116Rip myosin phosphatase Rho interacting protein - HPRD 15324660
mycbp2 DKFZp686M08244 | FLJ10106 | FLJ13826 | FLJ21597 | FLJ21646 | KIAA0916 | PAM MYC binding protein 2 - HPRD 15324660
OSBPL3 DKFZp667P1518 | KIAA0704 | MGC21526 | ORP-3 | ORP3 | OSBP3 oxysterol binding protein-like 3 Affinity Capture-MS Biogrid 17353931
PAK4 - P21蛋白(CDC42/RAC)激活激酶4 Affinity Capture-MS Biogrid 17353931
PARD3 ASIP | Baz | Bazooka | FLJ21015 | PAR3 | PAR3alpha | PARD3A | SE2-5L16 | SE2-5LT1 | SE2-5T2 PAR-3分区有缺陷的3个同源物(C. exelelans) Affinity Capture-MS Biogrid 17353931
pard3b ALS2CR19 | MGC16131 | PAR3B | PAR3L | PAR3LC | PAR3beta | Par3Lb par-3 partitioning defective 3 homolog B (C. elegans) - HPRD 15324660
PCTK1 FLJ16665 | PCTAIRE | PCTAIRE1 | PCTGAIRE PCTAIRE protein kinase 1 - HPRD,BioGRID 12154078
PI4KB pi4k-beta |pi4kiiibeta |pi4kbeta |pik4cb |PI4K92 phosphatidylinositol 4-kinase, catalytic, beta Affinity Capture-MS Biogrid 17353931
PI4KB pi4k-beta |pi4kiiibeta |pi4kbeta |pik4cb |PI4K92 phosphatidylinositol 4-kinase, catalytic, beta - HPRD 15324660
PNN DRS | SDK3 | memA | pinin pinin, desmosome associated protein - HPRD 15324660
PPFIBP1 L2 | hSGT2 | hSgt2p PTPRF interacting protein, binding protein 1 (liprin beta 1) Affinity Capture-MS Biogrid 17353931
PPIG 汽车-CYP |CYP |MGC133241 |SRCYP peptidylprolyl isomerase G (cyclophilin G) - HPRD 15324660
PRKCA AAG6 |MGC129900 |MGC129901 |PKC-Alpha |PKCA |Prkaca protein kinase C, alpha - HPRD,BioGRID 10433554
PRKCB MGC41878 |pkc-beta |PKCB |prkcb1 |PRKCB2 protein kinase C, beta - HPRD,BioGRID 10433554
PRKCD May1 |MGC49908 |PKCD |npkc-delta 蛋白激酶C,三角洲 - HPRD,BioGRID 10433554
PRKCG MGC57564 | PKC-gamma | PKCC | PKCG | SCA14 蛋白激酶C,伽玛 - HPRD,BioGRID 10433554
PRKCQ MGC126514 |MGC141919 |prkct |npkc-theta 蛋白激酶C,theta - HPRD,BioGRID 10433554
PRKCZ PKC-ZETA | PKC2 protein kinase C, zeta 亲和力捕获 - 韦斯特恩 Biogrid 10620507
PRPF19 NMP200 |PRP19 |PSO4 |snev |Ubox4 |HPSO4 PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) - HPRD 15324660
PRPF40A FBP-11 | FBP11 | FLAF1 | FLJ20585 | FNBP3 | HIP10 | HYPA | NY-REN-6 PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) - HPRD 15324660
PRPF4B KIAA0536 |pr4h |prp4 |prp4h |prp4k |DJ1013A10.1 PRP4 pre-mRNA processing factor 4 homolog B (yeast) Affinity Capture-MS Biogrid 17353931
Rab11fip2 KIAA0941 | Rab11-FIP2 | nRip11 RAB11 family interacting protein 2 (class I) - HPRD 15324660
RABEP1 RAB5EP | RABPT5 Rabaptin,Rab GTPase结合效应蛋白1 Affinity Capture-MS Biogrid 17353931
Rabgef1 FLJ32302 | RABEX5 | rabex-5 RAB guanine nucleotide exchange factor (GEF) 1 - HPRD 15324660
Rabgef1 FLJ32302 | RABEX5 | rabex-5 RAB guanine nucleotide exchange factor (GEF) 1 Affinity Capture-MS Biogrid 17353931
RACGAP1 HsCYK-4 | ID-GAP | MgcRacGAP Rac GTPase activating protein 1 Affinity Capture-MS Biogrid 17353931
RAF1 克拉夫|NS5 |RAF-1 |C-Raf v-raf-1 murine leukemia viral oncogene homolog 1 - HPRD 8702721|10433554
RAF1 克拉夫|NS5 |RAF-1 |C-Raf v-raf-1 murine leukemia viral oncogene homolog 1 Affinity Capture-MS
亲和力捕获 - 韦斯特恩
Biogrid 10433554|10620507
|17353931
RAI14 DKFZP564G013 |KIAA1334 |Norpeg |RAI13 retinoic acid induced 14 Affinity Capture-MS Biogrid 17353931
RALGPS2 FLJ10244 | FLJ25604 | KIAA0351 | dJ595C2.1 Ral GEF with PH domain and SH3 binding motif 2 - HPRD 15324660
RASAL2 MGC129919 | nGAP RAS protein activator like 2 - HPRD 15324660
SAMD4A DKFZp434H0350 | KIAA1053 | SAMD4 | SMG | SMGA | Smaug | Smaug1 sterile alpha motif domain containing 4A - HPRD 15324660
SAMD4B FLJ10211 | MGC99832 | SMGB sterile alpha motif domain containing 4B - HPRD 15324660
SAMD4B FLJ10211 | MGC99832 | SMGB sterile alpha motif domain containing 4B Affinity Capture-MS Biogrid 17353931
SF3B3 KIAA0017 | RSE1 | SAP130 | SF3b130 | STAF130 剪接因子3B,亚基3,130kDa - HPRD 15324660
SFN YWHAS Stratifin Affinity Capture-MS Biogrid 15778465
SH3BP5L FLJ33845 | KIAA1720 SH3结合结构域蛋白5样 - HPRD 15324660
SHCBP1 FLJ22009 | MGC26900 | PAL SHC SH2-domain binding protein 1 - HPRD 15324660
SHCBP1 FLJ22009 | MGC26900 | PAL SHC SH2-domain binding protein 1 Affinity Capture-MS Biogrid 17353931
SMCR7L FLJ20232 |HSU79252 |DJ1104E15.3 Smith-Magenis syndrome chromosome region, candidate 7-like - HPRD 15324660
SNRNP200 ASCC3L1 |brr2 |Helic2 |U5-200KD small nuclear ribonucleoprotein 200kDa (U5) Affinity Capture-MS Biogrid 17353931
儿子 BASS1 | C21orf50 | DBP-5 | FLJ21099 | FLJ33914 | KIAA1019 | NREBP | SON3 儿子DNA binding protein - HPRD 15324660
儿子 BASS1 | C21orf50 | DBP-5 | FLJ21099 | FLJ33914 | KIAA1019 | NREBP | SON3 儿子DNA binding protein Affinity Capture-MS Biogrid 17353931
src ASV | SRC1 | c-SRC | p60-Src V-SRC肉瘤(Schmidt-Ruppin A-2)病毒癌基因同源物(Avian) - HPRD 8702721
SRPK1 SFRSK1 SFRS protein kinase 1 - HPRD 15324660
SRRM1 160-KD | MGC39488 | POP101 | SRM160 serine/arginine repetitive matrix 1 - HPRD 15324660
SRRM2 300-KD | CWF21 | DKFZp686O15166 | FLJ21926 | FLJ22250 | KIAA0324 | MGC40295 | SRL300 | SRm300 serine/arginine repetitive matrix 2 Affinity Capture-MS Biogrid 17353931
TBC1D1 KIAA1108 |TBC |TBC1 TBC1(tre-2/USP6, BUB2, cdc16) domain family, member 1 - HPRD 15324660
TJP2 MGC26306 |x104 |ZO-2 |ZO2 tight junction protein 2 (zona occludens 2) - HPRD 15324660
TJP2 MGC26306 |x104 |ZO-2 |ZO2 tight junction protein 2 (zona occludens 2) Affinity Capture-MS Biogrid 17353931
TNFAIP3 A20 | MGC104522 | MGC138687 | MGC138688 | OTUD7C | TNFA1P2 tumor necrosis factor, alpha-induced protein 3 - HPRD 8702721
TSC1 KIAA0243 | LAM | MGC86987 | TSC tuberous sclerosis 1 Hamartin与14-3-3-Gamma相互作用。这种相互作用是建立在人麻和小鼠14-3-3-gamma同工型之间的相互作用的模型。 BIND 12176984
TSC2 FLJ43106 | LAM | TSC4 tuberous sclerosis 2 - HPRD 12438239
TSC2 FLJ43106 | LAM | TSC4 tuberous sclerosis 2 肿瘤抑制蛋白结核蛋白与14-3-3-GAMMA同工型相互作用。这种相互作用是根据人类结核素和小鼠14-3-3-gamma之间的相互作用建模的。 BIND 12176984
UCP2 BMIQ4 | SLC25A8 | UCPH 解偶联蛋白2(线粒体,质子载体) UCP2interacts with 14.3.3-gamma. BIND 10785390
UCP3 SLC25A9 uncoupling protein 3 (mitochondrial, proton carrier) UCP3interacts with 14.3.3-gamma. BIND 10785390
ZFP36 G0S24 | GOS24 | NUP475 | RNF162A | TIS11 | TTP zinc finger protein 36, C3H type, homolog (mouse) - HPRD 11886850
ZNF295 DKFZp781N1974 | ZBTB21 zinc finger protein 295 - HPRD 15324660


Section V. Pathway annotation

Pathway name 路径大小 # SZGR 2.0 genes in pathway 信息
KEGG CELL CYCLE 128 84 All SZGR 2.0 genes in this pathway
Kegg卵母细胞减数分裂 114 79 All SZGR 2.0 genes in this pathway
KEGG NEUROTROPHIN SIGNALING PATHWAY 126 103 All SZGR 2.0 genes in this pathway
BIOCARTA CHREBP2 PATHWAY 42 35 All SZGR 2.0 genes in this pathway
SIG PIP3 SIGNALING IN CARDIAC MYOCTES 67 54 All SZGR 2.0 genes in this pathway
心肌细胞中的SIG胰岛素受体途径 51 41 All SZGR 2.0 genes in this pathway
ST磷酸肌醇3激酶途径 37 29 All SZGR 2.0 genes in this pathway
PID LKB1 PATHWAY 47 37 All SZGR 2.0 genes in this pathway
PID NFAT 3PATHWAY 54 47 All SZGR 2.0 genes in this pathway
PID MTOR 4PATHWAY 69 55 All SZGR 2.0 genes in this pathway
PID FOXO PATHWAY 49 43 All SZGR 2.0 genes in this pathway
PID ERBB1 DOWNSTREAM PATHWAY 105 78 All SZGR 2.0 genes in this pathway
PID IL3 PATHWAY 27 19 All SZGR 2.0 genes in this pathway
PID PDGFRB途径 129 103 All SZGR 2.0 genes in this pathway
PID P38 MK2途径 21 19 All SZGR 2.0 genes in this pathway
PID BETA CATENIN NUC PATHWAY 80 60 All SZGR 2.0 genes in this pathway
PID A6B1 A6B4整合素途径 46 35 All SZGR 2.0 genes in this pathway
PID INSULIN GLUCOSE PATHWAY 26 24 All SZGR 2.0 genes in this pathway
PID PI3KCI AKT PATHWAY 35 30 All SZGR 2.0 genes in this pathway
PID PI3K PLC TRK途径 36 31 All SZGR 2.0 genes in this pathway
REACTOME CELL CYCLE 421 253 All SZGR 2.0 genes in this pathway
REACTOME CELL CYCLE MITOTIC 325 185 All SZGR 2.0 genes in this pathway
REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES 66 43 All SZGR 2.0 genes in this pathway
来自有丝分裂中心体NLP的反应组损失 59 38 All SZGR 2.0 genes in this pathway
REACTOME MITOTIC G2 G2 M PHASES 81 50 All SZGR 2.0 genes in this pathway
多德鼻咽癌DN 1375 806 All SZGR 2.0 genes in this pathway
Landis Erbb2乳腺肿瘤324 DN 149 93 All SZGR 2.0 genes in this pathway
MCBRYAN PUBERTAL BREAST 4 5WK DN 196 131 All SZGR 2.0 genes in this pathway
McBryan Pubertal乳房5 6WK DN 137 97 All SZGR 2.0 genes in this pathway
MCBRYAN PUBERTAL BREAST 6 7WK UP 197 135 All SZGR 2.0 genes in this pathway
RASHI RESPONSE TO IONIZING RADIATION 4 61 34 All SZGR 2.0 genes in this pathway
Martoriati MDM4靶向胎儿肝DN 514 319 All SZGR 2.0 genes in this pathway
NUYTTEN NIPP1 TARGETS DN 848 527 All SZGR 2.0 genes in this pathway
DEN与LCA5相互作用 26 21 All SZGR 2.0 genes in this pathway
Stark Hyppocampus 22Q11删除 53 40 All SZGR 2.0 genes in this pathway
宁慢性阻塞性肺疾病DN 121 79 All SZGR 2.0 genes in this pathway
BYSTRYKH HEMATOPOIESIS STEM CELL QTL TRANS 882 572 All SZGR 2.0 genes in this pathway
YAO HOXA10 TARGETS VIA PROGESTERONE DN 19 12 All SZGR 2.0 genes in this pathway
HU基因毒素作用直接与间接4小时 37 22 All SZGR 2.0 genes in this pathway
肺癌和内皮的钟分泌组 66 47 All SZGR 2.0 genes in this pathway
LEIN NEURON MARKERS 69 45 All SZGR 2.0 genes in this pathway
SANSOM APC MYC TARGETS 217 138 All SZGR 2.0 genes in this pathway
RIZKI TUMOR INVASIVENESS 3D DN 270 181 All SZGR 2.0 genes in this pathway
ACEVEDO LIVER CANCER UP 973 570 All SZGR 2.0 genes in this pathway
GRADE METASTASIS DN 45 31 All SZGR 2.0 genes in this pathway
WANG TUMOR INVASIVENESS UP 374 247 All SZGR 2.0 genes in this pathway
BOYLAN MULTIPLE MYELOMA C D UP 139 95 All SZGR 2.0 genes in this pathway
ZHANG TLX TARGETS 36HR UP 221 150 All SZGR 2.0 genes in this pathway
ROME INSULIN TARGETS IN MUSCLE UP 442 263 All SZGR 2.0 genes in this pathway
PHESSE TARGETS OF APC AND MBD2 DN 13 11 All SZGR 2.0 genes in this pathway
BRUINS UVC RESPONSE VIA TP53 GROUP A 898 516 All SZGR 2.0 genes in this pathway
LEE BMP2 TARGETS DN 882 538 All SZGR 2.0 genes in this pathway
WAKABAYASHI ADIPOGENESIS PPARG RXRA BOUND 36HR 152 88 All SZGR 2.0 genes in this pathway
WAKABAYASHI ADIPOGENESIS PPARG RXRA BOUND 8D 882 506 All SZGR 2.0 genes in this pathway
Delacroix Rar Bound ES 462 273 All SZGR 2.0 genes in this pathway
KRIEG HYPOXIA VIA KDM3A 53 34 All SZGR 2.0 genes in this pathway
RAO BOUND BY SALL4 227 149 All SZGR 2.0 genes in this pathway

Section VI. microRNA annotation

miRNA family Target position miRNA ID mirna seq
UTR开始 UTR结束 匹配方法
mir-132/212 232 238 m8 hsa-miR-212SZ UAACAGUCUCCAGUCACGGCC
HSA-MIR-132brain UAACAGUCUACAGCCAUGGUCG
miR-135 623 629 m8 HSA-MIR-135A UAUGGCUUUUUAUUCCUAUGUGA
HSA-MIR-135B UAUGGCUUUUCAUUCCUAUGUG
HSA-MIR-135A UAUGGCUUUUUAUUCCUAUGUGA
HSA-MIR-135B UAUGGCUUUUCAUUCCUAUGUG
miR-139 2283 2289 m8 HSA-MIR-139brain ucuacagugcacgugucu
miR-141/200a 2490 2497 1A,m8 HSA-MIR-141 UAACACUGUCUGGUAAAGAUGG
hsa-miR-200a UAACACUGUCUGGUAACGAUGU
miR-145 1993 1999 1A HSA-MIR-145 GUCCAGUUUUCCCAGGAAUCCCUU
miR-181 2722 2728 m8 HSA-MIR-181Abrain AACAUUCAACGCUGUCGGUGAGU
HSA-MIR-181BSZ AACAUUCAUUGCUGUCGGUGGG
HSA-MIR-181Cbrain AACAUUCAACCUGUCGGUGAGU
HSA-MIR-181Dbrain AACAUUCAUUGUUGUCGGUGGGUU
miR-182 158 165 1A,m8 HSA-MIR-182 uuuggcaaugguagaacucaca
miR-200bc/429 590 596 m8 hsa-miR-200b UAAUACUGCCUGGUAAUGAUGAC
hsa-miR-200c UAAUACUGCCGGGUAAUGAUGG
hsa-miR-429 UAAUACUGUCUGGUAAAACCGU
hsa-miR-200b UAAUACUGCCUGGUAAUGAUGAC
hsa-miR-200c UAAUACUGCCGGGUAAUGAUGG
hsa-miR-429 UAAUACUGUCUGGUAAAACCGU
mir-204/211 88 94 m8 hsa-miR-204brain UUCCCUUUGUCAUCCUAUGCCU
hsa-miR-211 UUCCCUUUGUCAUCCUUCGCCU
miR-217 2442 2448 m8 hsa-miR-217 UACUGCAUCAGGAACUGAUUGGAU
hsa-miR-217 UACUGCAUCAGGAACUGAUUGGAU
mir-221/222 2737 2743 m8 hsa-miR-221brain agcuacauugucugugggggguc
hsa-miR-222brain agcuacaucuggcuacugggucuc
miR-23 2724 2730 m8 hsa-miR-23abrain AUCACAUUGCCAGGGAUUUCC
hsa-miR-23bbrain AUCACAUUGCCAGGGAUUACC
miR-30-5p 585 591 1A HSA-MIR-30A-5P UGUAAACAUCCUCGACUGGAAG
hsa-miR-30cbrain UGUAAACAUCCUACACUCUCAGC
hsa-miR-30dSZ UGUAAACAUCCCCGACUGGAAG
hsa-miR-30bSZ uguaaacauccuaccucucagcu
hsa-miR-30e-5p UGUAAACAUCCUUGACUGGA
mir-323 2724 2730 1A hsa-miR-323brain GCACAUUACACGGUCGACCUCU
miR-324-3p 2607 2613 1A hsa-miR-324-3p CCACUGCCCCAGGUGCUGCUGG
mir-433-3p 2718 2725 1A,m8 hsa-miR-433brain aucaugauggggcuccucggugu
miR-485-5p 212 219 1A,m8 hsa-miR-485-5p AGAGGCUGGCCGUGAUGAAUUC
mir-96 159 165 1A HSA-MIR-96brain UUUGGCACUAGCACAUUUUUGC