Summary?
基因ID 80761
Symbol UPK3B
同义词 P35|UP3B|UPIIIB
描述 uroplakin 3B
参考 MIM:611887|HGNC:HGNC:21444|Ensembl:ENSG00000243566|HPRD:15626|Vega:Otthumg00000149929
基因type protein-coding
Map location 7q11.2
Pascal P值 0.403
Fetal beta -0.314
DMG 1 (# studies)
eGene Anterior cingulate cortex BA24
Caudate basal ganglia
Cerebellar Hemisphere
Cerebellum
Cortex
Frontal Cortex BA9
Hippocampus
Hypothalamus
Nucleus accumbens basal ganglia
梭子基底神经节

基因in Data Sources
基因set name 基因组方法 描述 Info
简历:PGCNP Genome-wide Association Study GWAS
DMG:Wockner_2014 Genome-wide DNA methylation analysis This dataset includes 4641 differentially methylated probes corresponding to 2929 unique genes between schizophrenia patients (n=24) and controls (n=24). 2

Section I. Genetics and epigenetics annotation

@Differentially methylated gene

Probe Chromosome Position Nearest gene P (dis) Beta (dis) FDR (dis) Study
CG22995176 7 76139470 UPK3B 1.95E-5 -0.459 0.016 DMG:Wockner_2014
cg16393713 7 76149509 UPK3B 4.724E-4 -0.607 0.046 DMG:Wockner_2014

@eQTL annotation

SNP ID Chromosome Position eGene 基因Entrez ID pvalue qvalue TSS distance eQTL type
rs10156094 7 76003967 UPK3B ENSG00000243566.2 3.808E-7 0 -135778 gtex_brain_ba24
rs10224066 7 76004709 UPK3B ENSG00000243566.2 3.947E-7 0 -135036 gtex_brain_ba24
rs1806888 7 76008504 UPK3B ENSG00000243566.2 5.699E-7 0 -131241 gtex_brain_ba24
rs4728708 7 76011592 UPK3B ENSG00000243566.2 5.855E-7 0 -128153 gtex_brain_ba24
RS1116209 7 76012259 UPK3B ENSG00000243566.2 7.166E-7 0 -127486 gtex_brain_ba24
rs4728710 7 76012666 UPK3B ENSG00000243566.2 6.01E-7 0 -127079 gtex_brain_ba24
rs11520962 7 76013265 UPK3B ENSG00000243566.2 6.509E-7 0 -126480 gtex_brain_ba24
rs7783542 7 76014174 UPK3B ENSG00000243566.2 4.297E-7 0 -125571 gtex_brain_ba24
rs9692598 7 76034453 UPK3B ENSG00000243566.2 5.517E-7 0 -105292 gtex_brain_ba24
rs6465120 7 76036364 UPK3B ENSG00000243566.2 1.514E-6 0 -103381 gtex_brain_ba24
rs202238946 7 76042281 UPK3B ENSG00000243566.2 6.89E-8 0 -97464 gtex_brain_ba24
rs62476845 7 76044896 UPK3B ENSG00000243566.2 6.394E-8 0 -94849 gtex_brain_ba24
rs62476846 7 76044969 UPK3B ENSG00000243566.2 4.074E-9 0 -94776 gtex_brain_ba24
rs62476847 7 76045245 UPK3B ENSG00000243566.2 2.305E-8 0 -94500 gtex_brain_ba24
rs1019097 7 76046184 UPK3B ENSG00000243566.2 3.814E-9 0 -93561 gtex_brain_ba24
rs1019096 7 76046324 UPK3B ENSG00000243566.2 5.079E-10 0 -93421 gtex_brain_ba24
rs7808402 7 76047900 UPK3B ENSG00000243566.2 1.454E-6 0 -91845 gtex_brain_ba24
rs7790093 7 76047965 UPK3B ENSG00000243566.2 1.102E-9 0 -91780 gtex_brain_ba24
RS199825117 7 76049016 UPK3B ENSG00000243566.2 3.591E-9 0 -90729 gtex_brain_ba24
rs2868366 7 76050132 UPK3B ENSG00000243566.2 8.505E-7 0 -89613 gtex_brain_ba24
rs4728722 7 76052091 UPK3B ENSG00000243566.2 1.387E-8 0 -87654 gtex_brain_ba24
RS35029472 7 76056562 UPK3B ENSG00000243566.2 3.052E-9 0 -83183 gtex_brain_ba24
RS28670022 7 76057242 UPK3B ENSG00000243566.2 2.803E-7 0 -82503 gtex_brain_ba24
rs6465128 7 76058767 UPK3B ENSG00000243566.2 2.17E-9 0 -80978 gtex_brain_ba24
rs887049 7 76060210 UPK3B ENSG00000243566.2 2.136E-7 0 -79535 gtex_brain_ba24
rs887048 7 76060235 UPK3B ENSG00000243566.2 2.046E-9 0 -79510 gtex_brain_ba24
RS3789839 7 76060533 UPK3B ENSG00000243566.2 3.272E-7 0 -79212 gtex_brain_ba24
rs3762030 7 76062619 UPK3B ENSG00000243566.2 3.137E-7 0 -77126 gtex_brain_ba24
rs6966715 7 76062644 UPK3B ENSG00000243566.2 3.139E-7 0 -77101 gtex_brain_ba24
rs3972768 7 76063333 UPK3B ENSG00000243566.2 7.877E-7 0 -76412 gtex_brain_ba24
RS1638132 7 76069453 UPK3B ENSG00000243566.2 5.574E-7 0 -70292 gtex_brain_ba24
RS2906999 7 76069811 UPK3B ENSG00000243566.2 7.423E-7 0 -69934 gtex_brain_ba24
rs147633246 7 76074342 UPK3B ENSG00000243566.2 2.058E-7 0 -65403 gtex_brain_ba24
rs10269955 7 76075119 UPK3B ENSG00000243566.2 1.496E-7 0 -64626 gtex_brain_ba24
RS145455490 7 76079040 UPK3B ENSG00000243566.2 4.388E-7 0 -60705 gtex_brain_ba24
rs28836522 7 76080479 UPK3B ENSG00000243566.2 3.858E-7 0 -59266 gtex_brain_ba24
rs1638083 7 76103824 UPK3B ENSG00000243566.2 2.311E-7 0 -35921 gtex_brain_ba24
rs1799187 7 76106552 UPK3B ENSG00000243566.2 1.723E-6 0 -33193 gtex_brain_ba24
rs1799186 7 76106561 UPK3B ENSG00000243566.2 7.299E-7 0 -33184 gtex_brain_ba24
rs1628255 7 76110549 UPK3B ENSG00000243566.2 1.807E-6 0 -29196 gtex_brain_ba24
rs1628199 7 76110568 UPK3B ENSG00000243566.2 6.612E-7 0 -29177 gtex_brain_ba24
RS1627895 7 76111296 UPK3B ENSG00000243566.2 1.029E-7 0 -28449 gtex_brain_ba24
rs1638074 7 76112060 UPK3B ENSG00000243566.2 4.977E-9 0 -27685 gtex_brain_ba24
rs76926369 7 76120504 UPK3B ENSG00000243566.2 1.686E-8 0 -19241 gtex_brain_ba24
rs1799172 7 76127071 UPK3B ENSG00000243566.2 7.172E-10 0 -12674 gtex_brain_ba24
rs1799127 7 76127854 UPK3B ENSG00000243566.2 2.606E-6 0 -11891 gtex_brain_ba24
rs4728773 7 76131061 UPK3B ENSG00000243566.2 2.314E-10 0 -8684 gtex_brain_ba24
rs4728774 7 76131169 UPK3B ENSG00000243566.2 4.856E-10 0 -8576 gtex_brain_ba24
rs2261368 7 76131328 UPK3B ENSG00000243566.2 2.653E-6 0 -8417 gtex_brain_ba24
RS2690683 7 76131586 UPK3B ENSG00000243566.2 1.903E-8 0 -8159 gtex_brain_ba24
rs6958774 7 76131650 UPK3B ENSG00000243566.2 3.65E-8 0 -8095 gtex_brain_ba24
RS6963784 7 76131812 UPK3B ENSG00000243566.2 6.374E-10 0 -7933 gtex_brain_ba24
rs4236507 7 76132270 UPK3B ENSG00000243566.2 2.683E-10 0 -7475 gtex_brain_ba24
rs4727187 7 76132473 UPK3B ENSG00000243566.2 2.688E-10 0 -7272 gtex_brain_ba24
rs17855260 7 76132898 UPK3B ENSG00000243566.2 4.557E-10 0 -6847 gtex_brain_ba24
rs201090408 7 76133427 UPK3B ENSG00000243566.2 3.804E-9 0 -6318 gtex_brain_ba24
rs11980492 7 76134236 UPK3B ENSG00000243566.2 2.058E-10 0 -5509 gtex_brain_ba24
rs7807719 7 76134433 UPK3B ENSG00000243566.2 2.061E-10 0 -5312 gtex_brain_ba24
rs7398 7 76135134 UPK3B ENSG00000243566.2 6.211E-10 0 -4611 gtex_brain_ba24
rs4728783 7 76135677 UPK3B ENSG00000243566.2 2.99E-10 0 -4068 gtex_brain_ba24
rs4728784 7 76135821 UPK3B ENSG00000243566.2 3.636E-10 0 -3924 gtex_brain_ba24
rs4728785 7 76135921 UPK3B ENSG00000243566.2 4.19E-10 0 -3824 gtex_brain_ba24
rs4728786 7 76135948 UPK3B ENSG00000243566.2 4.363E-10 0 -3797 gtex_brain_ba24
rs4728788 7 76136719 UPK3B ENSG00000243566.2 1.072E-9 0 -3026 gtex_brain_ba24
rs2110464 7 76137375 UPK3B ENSG00000243566.2 2.651E-9 0 -2370 gtex_brain_ba24
rs34656908 7 76137924 UPK3B ENSG00000243566.2 2.496E-9 0 -1821 gtex_brain_ba24
rs112158882 7 76138796 UPK3B ENSG00000243566.2 2.524E-9 0 -949 gtex_brain_ba24
rs1861105 7 76138835 UPK3B ENSG00000243566.2 1.007E-7 0 -910 gtex_brain_ba24
rs1861104 7 76138845 UPK3B ENSG00000243566.2 1.198E-7 0 -900 gtex_brain_ba24
rs1808308 7 76138967 UPK3B ENSG00000243566.2 2.537E-9 0 -778 gtex_brain_ba24
rs1808307 7 76139115 UPK3B ENSG00000243566.2 2.563E-9 0 -630 gtex_brain_ba24
rs4727191 7 76139384 UPK3B ENSG00000243566.2 2.567E-9 0 -361 gtex_brain_ba24
rs10952935 7 76139395 UPK3B ENSG00000243566.2 2.562E-9 0 -350 gtex_brain_ba24
rs10952936 7 76139453 UPK3B ENSG00000243566.2 2.58E-9 0 -292 gtex_brain_ba24
rs2286988 7 76142536 UPK3B ENSG00000243566.2 3.255E-9 0 2791 gtex_brain_ba24
rs2286989 7 76142872 UPK3B ENSG00000243566.2 3.228E-9 0 3127 gtex_brain_ba24
rs2286990 7 76142930 UPK3B ENSG00000243566.2 3.227E-9 0 3185 gtex_brain_ba24
rs887911 7 76143705 UPK3B ENSG00000243566.2 3.301E-9 0 3960 gtex_brain_ba24
rs2528284 7 76144156 UPK3B ENSG00000243566.2 3.331E-9 0 4411 gtex_brain_ba24
rs1636632 7 76144483 UPK3B ENSG00000243566.2 3.349E-9 0 4738 gtex_brain_ba24
rs3901999 7 76170705 UPK3B ENSG00000243566.2 8.998E-7 0 30960 gtex_brain_ba24
rs2528203 7 76173528 UPK3B ENSG00000243566.2 8.266E-9 0 33783 gtex_brain_ba24
rs2528204 7 76173536 UPK3B ENSG00000243566.2 1.759E-8 0 33791 gtex_brain_ba24
RS2949288 7 76175264 UPK3B ENSG00000243566.2 1.306E-7 0 35519 gtex_brain_ba24
rs201710700 7 76175351 UPK3B ENSG00000243566.2 1.007E-7 0 35606 gtex_brain_ba24
RS2533952 7 76198932 UPK3B ENSG00000243566.2 1.012E-6 0 59187 gtex_brain_ba24
rs804025 7 76200250 UPK3B ENSG00000243566.2 1.18E-6 0 60505 gtex_brain_ba24
rs1625567 7 76205396 UPK3B ENSG00000243566.2 1.541E-6 0 65651 gtex_brain_ba24
rs1799135 7 76210741 UPK3B ENSG00000243566.2 1.097E-6 0 70996 gtex_brain_ba24
rs1799139 7 76219946 UPK3B ENSG00000243566.2 8.472E-7 0 80201 gtex_brain_ba24
rs1754178 7 76226411 UPK3B ENSG00000243566.2 9.782e-7 0 86666 gtex_brain_ba24
rs1799140 7 76227250 UPK3B ENSG00000243566.2 9.242E-7 0 87505 gtex_brain_ba24
rs804002 7 76228642 UPK3B ENSG00000243566.2 9.62e-7 0 88897 gtex_brain_ba24
rs1754182 7 76229947 UPK3B ENSG00000243566.2 1.02E-6 0 90202 gtex_brain_ba24
RS1799211 7 76240677 UPK3B ENSG00000243566.2 2.147E-6 0 100932 gtex_brain_ba24
rs77156628 7 76251842 UPK3B ENSG00000243566.2 7.287E-7 0 112097 gtex_brain_ba24
rs2480243 7 76254672 UPK3B ENSG00000243566.2 1.744E-6 0 114927 gtex_brain_ba24
rs73365257 7 76266035 UPK3B ENSG00000243566.2 1.371E-6 0 126290 gtex_brain_ba24
rs10156094 7 76003967 UPK3B ENSG00000243566.2 8.404E-9 0 -135778 gtex_brain_putamen_basal
rs10224066 7 76004709 UPK3B ENSG00000243566.2 7.059E-9 0 -135036 gtex_brain_putamen_basal
rs1806888 7 76008504 UPK3B ENSG00000243566.2 3.085E-9 0 -131241 gtex_brain_putamen_basal
rs4728708 7 76011592 UPK3B ENSG00000243566.2 2.589E-9 0 -128153 gtex_brain_putamen_basal
RS1116209 7 76012259 UPK3B ENSG00000243566.2 1.561E-9 0 -127486 gtex_brain_putamen_basal
rs4728710 7 76012666 UPK3B ENSG00000243566.2 2.333E-9 0 -127079 gtex_brain_putamen_basal
rs11520962 7 76013265 UPK3B ENSG00000243566.2 1.55E-9 0 -126480 gtex_brain_putamen_basal
rs7792882 7 76013715 UPK3B ENSG00000243566.2 7.447E-9 0 -126030 gtex_brain_putamen_basal
rs7783542 7 76014174 UPK3B ENSG00000243566.2 1.392E-9 0 -125571 gtex_brain_putamen_basal
rs10227908 7 76014224 UPK3B ENSG00000243566.2 5.607E-9 0 -125521 gtex_brain_putamen_basal
RS11771651 7 76016222 UPK3B ENSG00000243566.2 2.062e-9 0 -123523 gtex_brain_putamen_basal
rs2868367 7 76016648 UPK3B ENSG00000243566.2 1.625E-9 0 -123097 gtex_brain_putamen_basal
rs4415243 7 76016979 UPK3B ENSG00000243566.2 3.588E-9 0 -122766 gtex_brain_putamen_basal
rs10281089 7 76017997 UPK3B ENSG00000243566.2 7.99E-9 0 -121748 gtex_brain_putamen_basal
rs1966269 7 76020550 UPK3B ENSG00000243566.2 8.105E-10 0 -119195 gtex_brain_putamen_basal
rs2903811 7 76021760 UPK3B ENSG00000243566.2 1.93E-9 0 -117985 gtex_brain_putamen_basal
rs4617087 7 76022497 UPK3B ENSG00000243566.2 1.927E-9 0 -117248 gtex_brain_putamen_basal
rs10261314 7 76023029 UPK3B ENSG00000243566.2 8.224E-10 0 -116716 gtex_brain_putamen_basal
rs6963070 7 76027235 UPK3B ENSG00000243566.2 2.975E-10 0 -112510 gtex_brain_putamen_basal
rs11975972 7 76028869 UPK3B ENSG00000243566.2 7.367E-10 0 -110876 gtex_brain_putamen_basal
RS6961135 7 76031349 UPK3B ENSG00000243566.2 6.245E-10 0 -108396 gtex_brain_putamen_basal
rs10228441 7 76032291 UPK3B ENSG00000243566.2 5.889E-10 0 -107454 gtex_brain_putamen_basal
RS11760779 7 76033906 UPK3B ENSG00000243566.2 1.696E-9 0 -105839 gtex_brain_putamen_basal
rs11760803 7 76033956 UPK3B ENSG00000243566.2 8.775E-10 0 -105789 gtex_brain_putamen_basal
rs55722505 7 76034150 UPK3B ENSG00000243566.2 3.525e-8 0 -105595 gtex_brain_putamen_basal
rs55646977 7 76034216 UPK3B ENSG00000243566.2 1.682E-9 0 -105529 gtex_brain_putamen_basal
rs9692598 7 76034453 UPK3B ENSG00000243566.2 2.125E-8 0 -105292 gtex_brain_putamen_basal
rs1968108 7 76034794 UPK3B ENSG00000243566.2 8.36E-10 0 -104951 gtex_brain_putamen_basal
rs1968107 7 76035372 UPK3B ENSG00000243566.2 7.518E-10 0 -104373 gtex_brain_putamen_basal
rs28450657 7 76035520 UPK3B ENSG00000243566.2 2.924E-7 0 -104225 gtex_brain_putamen_basal
rs1476756 7 76035847 UPK3B ENSG00000243566.2 1.34E-9 0 -103898 gtex_brain_putamen_basal
rs6944415 7 76035947 UPK3B ENSG00000243566.2 7.245E-10 0 -103798 gtex_brain_putamen_basal
RS6958115 7 76036166 UPK3B ENSG00000243566.2 2.506E-9 0 -103579 gtex_brain_putamen_basal
rs6465120 7 76036364 UPK3B ENSG00000243566.2 2.606E-9 0 -103381 gtex_brain_putamen_basal
rs6465121 7 76036380 UPK3B ENSG00000243566.2 9.577E-10 0 -103365 gtex_brain_putamen_basal
rs6958621 7 76036493 UPK3B ENSG00000243566.2 2.766E-9 0 -103252 gtex_brain_putamen_basal
RS11489557 7 76036569 UPK3B ENSG00000243566.2 2.84E-9 0 -103176 gtex_brain_putamen_basal
rs62476836 7 76036751 UPK3B ENSG00000243566.2 4.035E-8 0 -102994 gtex_brain_putamen_basal
rs55650029 7 76037122 UPK3B ENSG00000243566.2 1.308E-9 0 -102623 gtex_brain_putamen_basal
rs57966166 7 76037190 UPK3B ENSG00000243566.2 3.533E-9 0 -102555 gtex_brain_putamen_basal
rs11486951 7 76038153 UPK3B ENSG00000243566.2 3.356E-9 0 -101592 gtex_brain_putamen_basal
RS10235405 7 76039182 UPK3B ENSG00000243566.2 1.778E-9 0 -100563 gtex_brain_putamen_basal
RS2017544 7 76039448 UPK3B ENSG00000243566.2 4.234e-10 0 -100297 gtex_brain_putamen_basal
rs202238946 7 76042281 UPK3B ENSG00000243566.2 4.504E-9 0 -97464 gtex_brain_putamen_basal
RS112904325 7 76042282 UPK3B ENSG00000243566.2 9.845E-8 0 -97463 gtex_brain_putamen_basal
rs62476846 7 76044969 UPK3B ENSG00000243566.2 1.259E-8 0 -94776 gtex_brain_putamen_basal
rs62476847 7 76045245 UPK3B ENSG00000243566.2 6.684E-8 0 -94500 gtex_brain_putamen_basal
rs1019097 7 76046184 UPK3B ENSG00000243566.2 1.162E-8 0 -93561 gtex_brain_putamen_basal
rs1019096 7 76046324 UPK3B ENSG00000243566.2 1.054E-8 0 -93421 gtex_brain_putamen_basal
rs7808402 7 76047900 UPK3B ENSG00000243566.2 9.963E-8 0 -91845 gtex_brain_putamen_basal
rs7790093 7 76047965 UPK3B ENSG00000243566.2 1.463E-7 0 -91780 gtex_brain_putamen_basal
RS199825117 7 76049016 UPK3B ENSG00000243566.2 6.105E-11 0 -90729 gtex_brain_putamen_basal
rs2868366 7 76050132 UPK3B ENSG00000243566.2 1.334E-11 0 -89613 gtex_brain_putamen_basal
rs28632114 7 76051951 UPK3B ENSG00000243566.2 1.461E-6 0 -87794 gtex_brain_putamen_basal
rs4728722 7 76052091 UPK3B ENSG00000243566.2 9.915E-11 0 -87654 gtex_brain_putamen_basal
rs28609359 7 76055593 UPK3B ENSG00000243566.2 6.987E-9 0 -84152 gtex_brain_putamen_basal
RS35029472 7 76056562 UPK3B ENSG00000243566.2 9.648E-13 0 -83183 gtex_brain_putamen_basal
RS28670022 7 76057242 UPK3B ENSG00000243566.2 1.729E-10 0 -82503 gtex_brain_putamen_basal
rs6465128 7 76058767 UPK3B ENSG00000243566.2 1.231E-12 0 -80978 gtex_brain_putamen_basal
RS3789833 7 76059561 UPK3B ENSG00000243566.2 1.219E-6 0 -80184 gtex_brain_putamen_basal
RS3789834 7 76059838 UPK3B ENSG00000243566.2 1.217E-6 0 -79907 gtex_brain_putamen_basal
rs887049 7 76060210 UPK3B ENSG00000243566.2 3.068E-12 0 -79535 gtex_brain_putamen_basal
rs887048 7 76060235 UPK3B ENSG00000243566.2 1.808e-12 0 -79510 gtex_brain_putamen_basal
RS3789839 7 76060533 UPK3B ENSG00000243566.2 4.532E-10 0 -79212 gtex_brain_putamen_basal
RS77214139 7 76061348 UPK3B ENSG00000243566.2 1.192E-6 0 -78397 gtex_brain_putamen_basal
rs4509249 7 76061776 UPK3B ENSG00000243566.2 8.662E-7 0 -77969 gtex_brain_putamen_basal
rs3762030 7 76062619 UPK3B ENSG00000243566.2 3.295E-12 0 -77126 gtex_brain_putamen_basal
RS28427180 7 76062623 UPK3B ENSG00000243566.2 1.247E-6 0 -77122 gtex_brain_putamen_basal
rs6966715 7 76062644 UPK3B ENSG00000243566.2 9.463e-12 0 -77101 gtex_brain_putamen_basal
rs3972768 7 76063333 UPK3B ENSG00000243566.2 3.733E-8 0 -76412 gtex_brain_putamen_basal
rs62479062 7 76065124 UPK3B ENSG00000243566.2 1.039E-6 0 -74621 gtex_brain_putamen_basal
rs1541454 7 76066266 UPK3B ENSG00000243566.2 6.56e-10 0 -73479 gtex_brain_putamen_basal
RS1799222 7 76066269 UPK3B ENSG00000243566.2 2.086e-8 0 -73476 gtex_brain_putamen_basal
rs62475568 7 76069358 UPK3B ENSG00000243566.2 3.681E-7 0 -70387 gtex_brain_putamen_basal
RS1638132 7 76069453 UPK3B ENSG00000243566.2 2.501E-11 0 -70292 gtex_brain_putamen_basal
RS2906999 7 76069811 UPK3B ENSG00000243566.2 7.286E-10 0 -69934 gtex_brain_putamen_basal
RS200426507 7 76071412 UPK3B ENSG00000243566.2 6.854E-7 0 -68333 gtex_brain_putamen_basal
rs147633246 7 76074342 UPK3B ENSG00000243566.2 1.255E-7 0 -65403 gtex_brain_putamen_basal
rs10269955 7 76075119 UPK3B ENSG00000243566.2 2.306E-10 0 -64626 gtex_brain_putamen_basal
RS145455490 7 76079040 UPK3B ENSG00000243566.2 1.313E-8 0 -60705 gtex_brain_putamen_basal
rs28836522 7 76080479 UPK3B ENSG00000243566.2 4.318E-12 0 -59266 gtex_brain_putamen_basal
rs2430286 7 76081359 UPK3B ENSG00000243566.2 3.433E-11 0 -58386 gtex_brain_putamen_basal
RS113841149 7 76081509 UPK3B ENSG00000243566.2 3.765E-8 0 -58236 gtex_brain_putamen_basal
rs80058120 7 76084361 UPK3B ENSG00000243566.2 2.175E-7 0 -55384 gtex_brain_putamen_basal
rs143691932 7 76085166 UPK3B ENSG00000243566.2 3.617E-9 0 -54579 gtex_brain_putamen_basal
RS28437796 7 76089647 UPK3B ENSG00000243566.2 8.315E-7 0 -50098 gtex_brain_putamen_basal
RS1799200 7 76094015 UPK3B ENSG00000243566.2 2.217E-10 0 -45730 gtex_brain_putamen_basal
RS1616563 7 76098742 UPK3B ENSG00000243566.2 6.494E-8 0 -41003 gtex_brain_putamen_basal
rs1638083 7 76103824 UPK3B ENSG00000243566.2 1.069E-10 0 -35921 gtex_brain_putamen_basal
rs1638081 7 76106188 UPK3B ENSG00000243566.2 5.031E-7 0 -33557 gtex_brain_putamen_basal
rs28449857 7 76106474 UPK3B ENSG00000243566.2 1.812E-7 0 -33271 gtex_brain_putamen_basal
rs200752892 7 76106474 UPK3B ENSG00000243566.2 1.582E-7 0 -33271 gtex_brain_putamen_basal
rs1799187 7 76106552 UPK3B ENSG00000243566.2 2.413E-10 0 -33193 gtex_brain_putamen_basal
rs1799186 7 76106561 UPK3B ENSG00000243566.2 7.747E-9 0 -33184 gtex_brain_putamen_basal
rs62475650 7 76106983 UPK3B ENSG00000243566.2 8.428E-10 0 -32762 gtex_brain_putamen_basal
rs1628255 7 76110549 UPK3B ENSG00000243566.2 3.148E-10 0 -29196 gtex_brain_putamen_basal
rs1628199 7 76110568 UPK3B ENSG00000243566.2 5.275 e-11 0 -29177 gtex_brain_putamen_basal
RS1627895 7 76111296 UPK3B ENSG00000243566.2 2.897e-12 0 -28449 gtex_brain_putamen_basal
rs140471903 7 76111532 UPK3B ENSG00000243566.2 3.787E-7 0 -28213 gtex_brain_putamen_basal
rs4236506 7 76111835 UPK3B ENSG00000243566.2 2.228e-6 0 -27910年 gtex_brain_putamen_basal
rs1638074 7 76112060 UPK3B ENSG00000243566.2 2.706E-12 0 -27685 gtex_brain_putamen_basal
RS116848658 7 76112955 UPK3B ENSG00000243566.2 2.444E-8 0 -26790 gtex_brain_putamen_basal
rs76926369 7 76120504 UPK3B ENSG00000243566.2 6.753E-8 0 -19241 gtex_brain_putamen_basal
rs1799172 7 76127071 UPK3B ENSG00000243566.2 2.672E-9 0 -12674 gtex_brain_putamen_basal
rs1799127 7 76127854 UPK3B ENSG00000243566.2 3.21E-8 0 -11891 gtex_brain_putamen_basal
rs2280611 7 76130978 UPK3B ENSG00000243566.2 5.068e-9 0 -8767 gtex_brain_putamen_basal
rs4728773 7 76131061 UPK3B ENSG00000243566.2 1.332e-12 0 -8684 gtex_brain_putamen_basal
rs4728774 7 76131169 UPK3B ENSG00000243566.2 7.509E-12 0 -8576 gtex_brain_putamen_basal
RS2690683 7 76131586 UPK3B ENSG00000243566.2 2.55E-9 0 -8159 gtex_brain_putamen_basal
rs6958774 7 76131650 UPK3B ENSG00000243566.2 5.433E-11 0 -8095 gtex_brain_putamen_basal
RS6963784 7 76131812 UPK3B ENSG00000243566.2 1.017E-12 0 -7933 gtex_brain_putamen_basal
rs4236507 7 76132270 UPK3B ENSG00000243566.2 1.26e-12 0 -7475 gtex_brain_putamen_basal
rs4727187 7 76132473 UPK3B ENSG00000243566.2 1.253E-12 0 -7272 gtex_brain_putamen_basal
rs17855260 7 76132898 UPK3B ENSG00000243566.2 5.626E-10 0 -6847 gtex_brain_putamen_basal
rs201090408 7 76133427 UPK3B ENSG00000243566.2 2.821E-9 0 -6318 gtex_brain_putamen_basal
rs1465314 7 76134203 UPK3B ENSG00000243566.2 1.578E-6 0 -5542 gtex_brain_putamen_basal
rs11980492 7 76134236 UPK3B ENSG00000243566.2 1.242E-13 0 -5509 gtex_brain_putamen_basal
rs7807719 7 76134433 UPK3B ENSG00000243566.2 1.242E-13 0 -5312 gtex_brain_putamen_basal
rs7398 7 76135134 UPK3B ENSG00000243566.2 1.502E-12 0 -4611 gtex_brain_putamen_basal
rs4728783 7 76135677 UPK3B ENSG00000243566.2 1.258E-13 0 -4068 gtex_brain_putamen_basal
rs4728784 7 76135821 UPK3B ENSG00000243566.2 1.26e-13 0 -3924 gtex_brain_putamen_basal
rs4728785 7 76135921 UPK3B ENSG00000243566.2 1.26e-13 0 -3824 gtex_brain_putamen_basal
rs4728786 7 76135948 UPK3B ENSG00000243566.2 1.26e-13 0 -3797 gtex_brain_putamen_basal
rs4728788 7 76136719 UPK3B ENSG00000243566.2 1.145e-13 0 -3026 gtex_brain_putamen_basal
rs2110464 7 76137375 UPK3B ENSG00000243566.2 1.059E-13 0 -2370 gtex_brain_putamen_basal
rs34656908 7 76137924 UPK3B ENSG00000243566.2 1.306E-13 0 -1821 gtex_brain_putamen_basal
rs112158882 7 76138796 UPK3B ENSG00000243566.2 1.301E-13 0 -949 gtex_brain_putamen_basal
rs1861105 7 76138835 UPK3B ENSG00000243566.2 1.327E-13 0 -910 gtex_brain_putamen_basal
rs1861104 7 76138845 UPK3B ENSG00000243566.2 5.496E-13 0 -900 gtex_brain_putamen_basal
rs1808308 7 76138967 UPK3B ENSG00000243566.2 1.297E-13 0 -778 gtex_brain_putamen_basal
rs1808307 7 76139115 UPK3B ENSG00000243566.2 2.167E-13 0 -630 gtex_brain_putamen_basal
rs4727191 7 76139384 UPK3B ENSG00000243566.2 1.305E-13 0 -361 gtex_brain_putamen_basal
rs10952935 7 76139395 UPK3B ENSG00000243566.2 1.303E-13 0 -350 gtex_brain_putamen_basal
rs10952936 7 76139453 UPK3B ENSG00000243566.2 1.309E-13 0 -292 gtex_brain_putamen_basal
RS62476499 7 76140451 UPK3B ENSG00000243566.2 2.094E-6 0 706 gtex_brain_putamen_basal
rs2286988 7 76142536 UPK3B ENSG00000243566.2 1.102E-11 0 2791 gtex_brain_putamen_basal
rs2286989 7 76142872 UPK3B ENSG00000243566.2 1.385E-13 0 3127 gtex_brain_putamen_basal
rs2286990 7 76142930 UPK3B ENSG00000243566.2 1.384E-13 0 3185 gtex_brain_putamen_basal
rs887911 7 76143705 UPK3B ENSG00000243566.2 1.386E-13 0 3960 gtex_brain_putamen_basal
rs2528284 7 76144156 UPK3B ENSG00000243566.2 1.389E-13 0 4411 gtex_brain_putamen_basal
rs1636632 7 76144483 UPK3B ENSG00000243566.2 1.39E-13 0 4738 gtex_brain_putamen_basal
rs782487 7 76161400 UPK3B ENSG00000243566.2 7.015 e-9 0 21655 gtex_brain_putamen_basal
rs3901999 7 76170705 UPK3B ENSG00000243566.2 1.418E-6 0 30960 gtex_brain_putamen_basal
rs2528203 7 76173528 UPK3B ENSG00000243566.2 2.282E-8 0 33783 gtex_brain_putamen_basal
rs2528204 7 76173536 UPK3B ENSG00000243566.2 2.304E-8 0 33791 gtex_brain_putamen_basal
RS2949288 7 76175264 UPK3B ENSG00000243566.2 1.051E-10 0 35519 gtex_brain_putamen_basal
rs201710700 7 76175351 UPK3B ENSG00000243566.2 1.058E-8 0 35606 gtex_brain_putamen_basal
rs1799131 7 76178113 UPK3B ENSG00000243566.2 4.18E-11 0 38368 gtex_brain_putamen_basal
RS544543694 7 76181713 UPK3B ENSG00000243566.2 3.754E-8 0 41968 gtex_brain_putamen_basal
RS810699 7 76182731 UPK3B ENSG00000243566.2 3.121E-10 0 42986 gtex_brain_putamen_basal
RS74695153 7 76184983 UPK3B ENSG00000243566.2 7.402E-7 0 45238 gtex_brain_putamen_basal
rs10239706 7 76185877 UPK3B ENSG00000243566.2 1.257E-6 0 46132 gtex_brain_putamen_basal
rs62477976 7 76188633 UPK3B ENSG00000243566.2 7.486E-8 0 48888 gtex_brain_putamen_basal
RS71521133 7 76190268 UPK3B ENSG00000243566.2 2.514E-9 0 50523 gtex_brain_putamen_basal
rs10250158 7 76190762 UPK3B ENSG00000243566.2 6.781E-8 0 51017 gtex_brain_putamen_basal
rs62477978 7 76191766 UPK3B ENSG00000243566.2 1.506E-6 0 52021 gtex_brain_putamen_basal
RS140081370 7 76193193 UPK3B ENSG00000243566.2 7.475E-8 0 53448 gtex_brain_putamen_basal
rs62477980 7 76194028 UPK3B ENSG00000243566.2 2.193E-8 0 54283 gtex_brain_putamen_basal
rs143107992 7 76195805 UPK3B ENSG00000243566.2 5.148E-7 0 56060 gtex_brain_putamen_basal
rs10231460 7 76196425 UPK3B ENSG00000243566.2 6.461E-7 0 56680 gtex_brain_putamen_basal
rs2771164 7 76197643 UPK3B ENSG00000243566.2 2.18E-11 0 57898 gtex_brain_putamen_basal
RS2533952 7 76198932 UPK3B ENSG00000243566.2 1.346E-10 0 59187 gtex_brain_putamen_basal
rs804025 7 76200250 UPK3B ENSG00000243566.2 1.246E-11 0 60505 gtex_brain_putamen_basal
rs62477985 7 76203889 UPK3B ENSG00000243566.2 1.472E-6 0 64144 gtex_brain_putamen_basal
rs1625567 7 76205396 UPK3B ENSG00000243566.2 3.059e-11 0 65651 gtex_brain_putamen_basal
rs3851929 7 76207290 UPK3B ENSG00000243566.2 1.274E-7 0 67545 gtex_brain_putamen_basal
rs1799135 7 76210741 UPK3B ENSG00000243566.2 2.167e-11 0 70996 gtex_brain_putamen_basal
rs77896824 7 76213662 UPK3B ENSG00000243566.2 1.861E-6 0 73917 gtex_brain_putamen_basal
rs10247542 7 76215092 UPK3B ENSG00000243566.2 1.202E-6 0 75347 gtex_brain_putamen_basal
rs1754174 7 76215602 UPK3B ENSG00000243566.2 7.499E-9 0 75857 gtex_brain_putamen_basal
rs11505779 7 76216384 UPK3B ENSG00000243566.2 2.003E-6 0 76639 gtex_brain_putamen_basal
RS11505688 7 76216621 UPK3B ENSG00000243566.2 1.943E-6 0 76876 gtex_brain_putamen_basal
rs201911157 7 76216728 UPK3B ENSG00000243566.2 2.021E-6 0 76983 gtex_brain_putamen_basal
rs1799139 7 76219946 UPK3B ENSG00000243566.2 1.941E-11 0 80201 gtex_brain_putamen_basal
rs10264853 7 76222181 UPK3B ENSG00000243566.2 1.259E-6 0 82436 gtex_brain_putamen_basal
rs10268836 7 76222939 UPK3B ENSG00000243566.2 2.084e-6 0 83194 gtex_brain_putamen_basal
rs1754178 7 76226411 UPK3B ENSG00000243566.2 6.753E-10 0 86666 gtex_brain_putamen_basal
rs1799140 7 76227250 UPK3B ENSG00000243566.2 6.713E-10 0 87505 gtex_brain_putamen_basal
rs804002 7 76228642 UPK3B ENSG00000243566.2 7.011E-10 0 88897 gtex_brain_putamen_basal
rs1754180 7 76228679 UPK3B ENSG00000243566.2 3.822e-9 0 88934 gtex_brain_putamen_basal
rs1799142 7 76228705 UPK3B ENSG00000243566.2 6.984e-7 0 88960 gtex_brain_putamen_basal
RS10258554 7 76229141 UPK3B ENSG00000243566.2 1.527E-8 0 89396 gtex_brain_putamen_basal
rs1754181 7 76229194 UPK3B ENSG00000243566.2 1.537E-6 0 89449 gtex_brain_putamen_basal
rs1754182 7 76229947 UPK3B ENSG00000243566.2 2.948E-11 0 90202 gtex_brain_putamen_basal
rs10265902 7 76230140 UPK3B ENSG00000243566.2 4E-7 0 90395 gtex_brain_putamen_basal
RS56237536 7 76230623 UPK3B ENSG00000243566.2 4.295E-10 0 90878 gtex_brain_putamen_basal
rs1636645 7 76231596 UPK3B ENSG00000243566.2 6.687E-10 0 91851 gtex_brain_putamen_basal
rs1636646 7 76231772 UPK3B ENSG00000243566.2 7.308E-7 0 92027 gtex_brain_putamen_basal
RS189219383 7 76232817 UPK3B ENSG00000243566.2 5.287E-7 0 93072 gtex_brain_putamen_basal
RS138598428 7 76234639 UPK3B ENSG00000243566.2 1.567E-9 0 94894 gtex_brain_putamen_basal
rs1754191 7 76235700 UPK3B ENSG00000243566.2 2.147E-7 0 95955 gtex_brain_putamen_basal
rs2462298 7 76236740 UPK3B ENSG00000243566.2 1.29E-8 0 96995 gtex_brain_putamen_basal
rs1754196 7 76236751 UPK3B ENSG00000243566.2 6.001E-8 0 97006 gtex_brain_putamen_basal
rs60316672 7 76236880 UPK3B ENSG00000243566.2 8.782E-12 0 97135 gtex_brain_putamen_basal
RS62478039 7 76237030 UPK3B ENSG00000243566.2 7.359E-8 0 97285 gtex_brain_putamen_basal
rs711306 7 76239480 UPK3B ENSG00000243566.2 2.321E-8 0 99735 gtex_brain_putamen_basal
rs1799146 7 76239703 UPK3B ENSG00000243566.2 6.132E-9 0 99958 gtex_brain_putamen_basal
RS7792149 7 76240247 UPK3B ENSG00000243566.2 1.077E-8 0 100502 gtex_brain_putamen_basal
rs7808670 7 76240459 UPK3B ENSG00000243566.2 1.299E-9 0 100714 gtex_brain_putamen_basal
RS1799210 7 76240529 UPK3B ENSG00000243566.2 2.589E-7 0 100784 gtex_brain_putamen_basal
RS1799211 7 76240677 UPK3B ENSG00000243566.2 1.066E-6 0 100932 gtex_brain_putamen_basal
RS71819724 7 76240785 UPK3B ENSG00000243566.2 5.689E-9 0 101040 gtex_brain_putamen_basal
rs62475904 7 76241211 UPK3B ENSG00000243566.2 7.598E-9 0 101466 gtex_brain_putamen_basal
rs55764248 7 76241216 UPK3B ENSG00000243566.2 7.595E-9 0 101471 gtex_brain_putamen_basal
RS1638147 7 76245478 UPK3B ENSG00000243566.2 5.566E-7 0 105733 gtex_brain_putamen_basal
rs1636620 7 76247805 UPK3B ENSG00000243566.2 2.029E-10 0 108060 gtex_brain_putamen_basal
RS1799226 7 76248624 UPK3B ENSG00000243566.2 2.718E-8 0 108879 gtex_brain_putamen_basal
rs72105261 7 76248704 UPK3B ENSG00000243566.2 1.344E-8 0 108959 gtex_brain_putamen_basal
rs62475936 7 76249329 UPK3B ENSG00000243566.2 6.058E-8 0 109584 gtex_brain_putamen_basal
rs62475938 7 76249808 UPK3B ENSG00000243566.2 1.996E-9 0 110063 gtex_brain_putamen_basal
rs1754214 7 76249895 UPK3B ENSG00000243566.2 4.013E-10 0 110150 gtex_brain_putamen_basal
rs62475940 7 76250292 UPK3B ENSG00000243566.2 1.775E-6 0 110547 gtex_brain_putamen_basal
rs1636627 7 76250789 UPK3B ENSG00000243566.2 4.15E-12 0 111044 gtex_brain_putamen_basal
RS1799231 7 76250806 UPK3B ENSG00000243566.2 1.613E-8 0 111061 gtex_brain_putamen_basal
rs1754218 7 76251126 UPK3B ENSG00000243566.2 3.13E-8 0 111381 gtex_brain_putamen_basal
rs77156628 7 76251842 UPK3B ENSG00000243566.2 2.747E-10 0 112097 gtex_brain_putamen_basal
RS1799232 7 76252547 UPK3B ENSG00000243566.2 1.463E-8 0 112802 gtex_brain_putamen_basal
RS1638113 7 76252630 UPK3B ENSG00000243566.2 3.861E-9 0 112885 gtex_brain_putamen_basal
RS1799233 7 76253066 UPK3B ENSG00000243566.2 1.177E-8 0 113321 gtex_brain_putamen_basal
rs1636630 7 76253315 UPK3B ENSG00000243566.2 3.353E-7 0 113570 gtex_brain_putamen_basal
RS1799236 7 76254014 UPK3B ENSG00000243566.2 1.258E-7 0 114269 gtex_brain_putamen_basal
rs2527933 7 76254332 UPK3B ENSG00000243566.2 6.303E-8 0 114587 gtex_brain_putamen_basal
rs2480243 7 76254672 UPK3B ENSG00000243566.2 2.505E-9 0 114927 gtex_brain_putamen_basal
rs62476705 7 76260534 UPK3B ENSG00000243566.2 1.743E-6 0 120789 gtex_brain_putamen_basal
rs62473767 7 76264697 UPK3B ENSG00000243566.2 4.578E-7 0 124952 gtex_brain_putamen_basal
rs62473768 7 76264698 UPK3B ENSG00000243566.2 6.44E-7 0 124953 gtex_brain_putamen_basal
rs73365257 7 76266035 UPK3B ENSG00000243566.2 1.932E-10 0 126290 gtex_brain_putamen_basal
rs200689025 7 76267565 UPK3B ENSG00000243566.2 2.302E-9 0 127820 gtex_brain_putamen_basal
rs1636634 7 76268277 UPK3B ENSG00000243566.2 2.73E-9 0 128532 gtex_brain_putamen_basal
rs62473776 7 76272786 UPK3B ENSG00000243566.2 1.58e-6 0 133041 gtex_brain_putamen_basal
rs147316035 7 76274121 UPK3B ENSG00000243566.2 6.473E-7 0 134376 gtex_brain_putamen_basal
rs147693721 7 76274286 UPK3B ENSG00000243566.2 2.862E-9 0 134541 gtex_brain_putamen_basal
rs199919975 7 76275542 UPK3B ENSG00000243566.2 2.158E-6 0 135797 gtex_brain_putamen_basal
rs62473783 7 76276132 UPK3B ENSG00000243566.2 6.337E-7 0 136387 gtex_brain_putamen_basal
rs1292265 7 76280448 UPK3B ENSG00000243566.2 2.062e-8 0 140703 gtex_brain_putamen_basal
RS77649064 7 76283327 UPK3B ENSG00000243566.2 1.147E-6 0 143582 gtex_brain_putamen_basal
rs3852312 7 76311520 UPK3B ENSG00000243566.2 1.224E-7 0 171775 gtex_brain_putamen_basal
rs62473850 7 76312934 UPK3B ENSG00000243566.2 7.898E-8 0 173189 gtex_brain_putamen_basal
rs3864581 7 76316484 UPK3B ENSG00000243566.2 1E-7 0 176739 gtex_brain_putamen_basal
RS10257644 7 76325810 UPK3B ENSG00000243566.2 4.378E-7 0 186065 gtex_brain_putamen_basal
RS38709 7 76357838 UPK3B ENSG00000243566.2 3.169E-8 0 218093 gtex_brain_putamen_basal
rs62475031 7 76379476 UPK3B ENSG00000243566.2 1.783E-6 0 239731 gtex_brain_putamen_basal
RS117953357 7 76380613 UPK3B ENSG00000243566.2 1.725E-6 0 240868 gtex_brain_putamen_basal
rs142065576 7 76382277 UPK3B ENSG00000243566.2 7.651E-7 0 242532 gtex_brain_putamen_basal
rs55876699 7 76382321 UPK3B ENSG00000243566.2 8.005E-7 0 242576 gtex_brain_putamen_basal
rs38663 7 76392620 UPK3B ENSG00000243566.2 1.593E-7 0 252875 gtex_brain_putamen_basal
rs38659 7 76395981 UPK3B ENSG00000243566.2 9.974E-7 0 256236 gtex_brain_putamen_basal
rs73142062 7 76399566 UPK3B ENSG00000243566.2 1.404E-6 0 259821 gtex_brain_putamen_basal

Section II. Transcriptome annotation

基因ral gene expression (GTEx)

Not available

Devlopment期间的基因表达(BrainCloud)

脚注:
共有269个时间点秘密策划,n = 38胎儿samples (x=1:38). Each triangle represents one time point.

基因expression of temporal and spatial changes (BrainSpan)

脚注:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
基因 皮尔逊的相关性 斯皮尔曼的相关性
PILRB 0.72 0.68
AP1G2 0.71 0.74
NSUN5B 0.71 0.69
MYO15B 0.69 0.67
SEC31B 0.69 0.67
SCNN1D 0.69 0.70
NSUN5C 0.69 0.69
CES8 0.68 0.68
AC022382.1 0.68 0.62
CYP2D7P1 0.68 0.62
前10个负共表达基因
基因 皮尔逊的相关性 斯皮尔曼的相关性
HSPA13 -0.30 -0.29
ABCD2 -0.29 -0.28
CAV1 -0.29 -0.30
TM4SF18 -0.29 -0.27
PNPLA8 -0.28 -0.33
ELTD1 -0.28 -0.27
AGPS -0.28 -0.29
TTC33 -0.28 -0.28
FAM8A1 -0.28 -0.26
TRAM1 -0.28 -0.36

Section V. Pathway annotation

Pathway name Pathway size #szgr 2.0基因 Info
Markey RB1慢性LOF DN 118 78 All SZGR 2.0 genes in this pathway
Gaussmann MLL AF4融合靶向DN 90 61 All SZGR 2.0 genes in this pathway
MARTORIATI MDM4 TARGETS FETAL LIVER DN 514 319 All SZGR 2.0 genes in this pathway
BYSTRYKH HEMATOPOIESIS STEM CELL AND BRAIN QTL TRANS 185 114 All SZGR 2.0 genes in this pathway
SWEET LUNG CANCER KRAS DN 435 289 All SZGR 2.0 genes in this pathway
洛佩兹上皮类间皮瘤 17 11 All SZGR 2.0 genes in this pathway
MIKKELSEN ES ICP WITH H3K4ME3 718 401 All SZGR 2.0 genes in this pathway
YAO对孕酮簇9的时间反应9 76 45 All SZGR 2.0 genes in this pathway
ZWANG TRANSIENTLY UP BY 2ND EGF PULSE ONLY 1725 838 All SZGR 2.0 genes in this pathway