Gene Page:HGS
Summary?
基因 | 9146 |
象征 | HGS |
Synonyms | HRS |
Description | 肝细胞生长因子调节的酪氨酸激酶底物 |
Reference | MIM:604375|HGNC:HGNC:4897|ENSEMBL:ENSG00000185359|HPRD:05085|Vega:Otthumg00000178109 |
基因类型 | 蛋白质编码 |
Map location | 17Q25 |
Pascal p-value | 0.206 |
Sherlock p-value | 0.55 |
胎儿β | -0.442 |
主持人 | Myers' cis & trans |
Support | Ascano FMRP目标 |
Gene in Data Sources
基因集名称 | Method of gene set | Description | 信息 |
---|---|---|---|
CV:PGCnp | 全基因组协会研究 | GWAS | |
PMID:cooccur | High-throughput literature-search | PubMed中的系统搜索与SCZ关键字共发生的基因。总共包括3027个基因。 | |
Literature | High-throughput literature-search | 与精神分裂症关键词共同存在:精神分裂症,精神分裂症,精神分裂症 | 点击显示详细信息 |
Network | Shortest path distance of core genes in the Human protein-protein interaction network | PPI网络中最短路径的贡献:0.0198 |
Section I. Genetics and epigenetics annotation
EQTL注释
SNP ID | 染色体 | 位置 | 主持人 | Gene Entrez ID | PVALUE | QVALUE | TSS距离 | EQTL类型 |
---|---|---|---|---|---|---|---|---|
rs1578978 | CHR8 | 118196802 | HGS | 9146 | 0.06 | 反式 |
第二节。转录组注释
一般基因表达(GTEX)
![无法使用](http://www.tjghsg.com/bioinfo/SZGR/GeneImg/HGS_DE_GTEx.png)
Devlopment期间的基因表达(BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
时间变化的基因表达(brainspan)
Footnote:
SC:亚皮质区域;SM:感觉运动区域;FC:额叶皮层;和TP:颞顶皮层
ST1:胎儿(13-26个概念后周),ST2:婴儿早期至童年(4个月至11年)和ST3:青春期至成年期(13-23年)
所示的栏表示表达分布的较低25%和上层25%。
大脑区域的顶级共表达基因
前10个积极共表达的基因 | ||
Gene | 皮尔逊的相关性 | 斯皮尔曼的相关性 |
BYSL | 0.92 | 0.92 |
PSMD3 | 0.92 | 0.92 |
DGCR14 | 0.92 | 0.91 |
USF1 | 0.92 | 0.94 |
hinfp | 0.92 | 0.92 |
Kat5 | 0.92 | 0.93 |
daxx | 0.92 | 0.93 |
PRPF31 | 0.91 | 0.90 |
PUF60 | 0.91 | 0.91 |
DHP | 0.91 | 0.93 |
前10个负共表达基因 | ||
Gene | 皮尔逊的相关性 | 斯皮尔曼的相关性 |
AF347015.27 | -0.83 | -0.89 |
AF347015.31 | -0.83 | -0.87 |
MT-CO2 | -0.83 | -0.86 |
AF347015.8 | -0.82 | -0.88 |
mt-cyb | -0.82 | -0.87 |
AF347015.33 | -0.81 | -0.85 |
AF347015.15 | -0.80 | -0.86 |
AF347015.2 | -0.78 | -0.86 |
AF347015.21 | -0.77 | -0.87 |
AF347015.26 | -0.76 | -0.86 |
第三节。基因本体论注释
分子功能 | 去学期 | 证据 | 神经关键字 | PubMed ID |
---|---|---|---|---|
去:0008270 | 锌离子结合 | IEA | - | |
GO:0019904 | 蛋白质域特异性结合 | IPI | 11984006 | |
GO:0046872 | metal ion binding | IEA | - | |
生物过程 | 去学期 | 证据 | 神经关键字 | PubMed ID |
GO:0007165 | 信号转导 | TAS | 9407053 | |
GO:0008285 | 负调节细胞proliferation | TAS | 9407053 | |
去:0006886 | 细胞内蛋白转运 | IEA | - | |
GO:0016197 | 内体运输 | nas | 10861283 | |
GO:0042176 | 调节蛋白质分解代谢过程 | TAS | 15611048 | |
GO:0046426 | JAK-STAT级联的负调节 | 艾达 | 12444102 | |
Cellular component | 去学期 | 证据 | 神经关键字 | PubMed ID |
GO:0005829 | 细胞质 | 经验 | 10567358|12218189|15962011 |
|
去:0005737 | cytoplasm | IEA | - | |
去:0016020 | membrane | IEA | - | |
GO:0031901 | 早期内体膜 | IEA | - |
Section IV. Protein-protein interaction annotation
互动者 | 别名b | 官方全名b | 实验 | Source | PubMed ID |
---|---|---|---|---|---|
开始 | KIAA1446 | 富含脑添加的鸟苷酸激酶相关同源物(大鼠) | Two-hybrid | Biogrid | 16189514 |
C1orf190 | FLJ25163 | 染色体1开放阅读框190 | Two-hybrid | Biogrid | 16189514 |
CCDC33 | FLJ23168 |FLJ32855 |MGC34145 | coiled-coil domain containing 33 | Two-hybrid | Biogrid | 16189514 |
cltc | CHC |CHC17 |CLH-17 |cltcl2 |HC |KIAA0034 | 网状蛋白,重链(HC) | - | HPRD,BioGRID | 11532964 |
DAZAP2 | KIAA0058 | MGC14319 | MGC766 | PRTB | DAZ相关蛋白2 | Two-hybrid | Biogrid | 16189514 |
DLG4 | FLJ97752 |FLJ98574 |PSD95 |SAP90 | 圆盘,大型同源物4(果蝇) | - | HPRD,BioGRID | 12151521 |
EHMT2 | BAT8 |C6orf30 |DKFZP686H08213 |FLJ35547 |g9a |KMT1C |NG36 |NG36/G9A | 正式组蛋白 - 赖氨酸N-甲基转移酶2 | Two-hybrid | Biogrid | 16189514 |
EPS15 | AF-1P | AF1P | MLLT5 | 表皮生长因子受体途径底物15 | - | HPRD,BioGRID | 12551915 |
Exoc7 | 2-5-3p | DKFZp686J04253 | EX070 | EXO70 | EXOC1 | Exo70p | FLJ40965 | FLJ46415 | YJL085W | exocyst complex component 7 | Two-hybrid | Biogrid | 16189514 |
exoc8 | exo84 |exo84p |SEC84 | exocyst complex component 8 | Two-hybrid | Biogrid | 16189514 |
GKAP1 | FKSG21 |FLJ25469 |GKAP42 | G激酶锚定蛋白1 | Two-hybrid | Biogrid | 16189514 |
hap1 | hap2 |hip5 |HLP |HHLP1 | 亨廷顿相关蛋白1 | - | HPRD,BioGRID | 12021262 |
KRT18 | CYK18 | K18 | 角蛋白18 | Two-hybrid | Biogrid | 16189514 |
KRT19 | CK19 |K19 |k1cs |MGC15366 | 角蛋白19 | Two-hybrid | Biogrid | 16189514 |
LDOC1 | BCUR1 | Mar7 | Mart7 | 亮氨酸拉链,在癌症中下调1 | Two-hybrid | Biogrid | 16189514 |
莱斯特 | CHS |CHS1 | 溶酶体贩运调节剂 | - | HPRD,BioGRID | 11984006 |
MAP3K7 | TAK1 | TGF1a | 有丝分裂原激活的蛋白激酶激酶激酶7 | - | HPRD,BioGRID | 11397816 |
Med7 | CRSP33 |CRSP9 |MGC12284 | 中介复合体亚基7 | Two-hybrid | Biogrid | 16189514 |
见面 | auts9 |HGFR |RCCP2 |C-MET | met proto-oncogene (hepatocyte growth factor receptor) | - | HPRD | 8380735 |
mif4gd | AD023 | MGC45027 | MIFD | SLIP1 | MIF4G domain containing | Two-hybrid | Biogrid | 16189514 |
NEDD4 | KIAA0093 |MGC176705 |nedd4-1 |RPF1 | 神经前体细胞表达,发育下调4 | - | HPRD,BioGRID | 12230472 |
NF2 | ACN | BANF | SCH | neurofibromin 2 (merlin) | - | HPRD,BioGRID | 10861283|11285248 |
NF2 | ACN | BANF | SCH | neurofibromin 2 (merlin) | merlin interacts with HRS. | 绑定 | 12444101 |
NMI | - | N-myc (and STAT) interactor | Two-hybrid | Biogrid | 16189514 |
PAK1 | MGC130000 |MGC130001 |pakalpha | P21蛋白(CDC42/RAC)激活激酶1 | - | HPRD,BioGRID | 11397816 |
PIK3R1 | GRB1 | p85 | p85-ALPHA | 磷酸肌醇3-激酶,调节亚基1(alpha) | - | HPRD | 10970851 |
snap25 | FLJ23079 |RIC-4 |Ric4 |sec9 |快照|Snap-25 |BA416N4.2 |DJ1068F16.2 | 突触小体相关蛋白,25KDA | - | HPRD | 10825299|11493665|11493665 |
snap25 | FLJ23079 |RIC-4 |Ric4 |sec9 |快照|Snap-25 |BA416N4.2 |DJ1068F16.2 | 突触小体相关蛋白,25KDA | - | HPRD | 11493665 |
SNX1 | HsT17379 | MGC8664 | SNX1A | Vps5 | 排序Nexin 1 | - | HPRD,BioGRID | 11110793 |
斯坦 | DKFZp686J2352 | STAM1 | signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 | - | HPRD,BioGRID | 9407053 |
斯坦2 | DKFZP564C047 |HBP |stam2a |Stam2b | signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 | 亲和力捕获 - 韦斯特恩 共同分级 Two-hybrid |
Biogrid | 12551915|16189514 |
tada2l | ADA2 | ADA2A | FLJ12705 | KL04P | hADA2 | 反式criptional adaptor 2 (ADA2 homolog, yeast)-like | Two-hybrid | Biogrid | 16189514 |
TSG101 | TSG10 |VPS23 | 肿瘤敏感性基因101 | TSG101与HGS(HRS)相互作用。 | 绑定 | 14519844 |
TSG101 | TSG10 |VPS23 | 肿瘤敏感性基因101 | 亲和力捕获 - 韦斯特恩 Two-hybrid |
Biogrid | 12802020|16189514 |
TSG101 | TSG10 |VPS23 | 肿瘤敏感性基因101 | HRSinteracts with TSG101. | 绑定 | 12802020 |
UBE2I | C358B7.1 | P18 | UBC9 | ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) | Two-hybrid | Biogrid | 16189514 |
UBQLN1 | DA41 |DSK2 |FLJ90054 |plic-1 |XDRP1 | ubiquilin 1 | Two-hybrid | Biogrid | 16189514 |
USHBP1 | AIEBP |FLJ38709 |FLJ90681 |MCC2 | Usher综合征1C结合蛋白1 | Two-hybrid | Biogrid | 16189514 |
VPS37A | FLJ32642 |FLJ42616 |HCRP1 |PQBP2 | 液泡蛋白排序37同源物A(酿酒酵母) | - | HPRD | 15240819|15509564 |
VPS37C | FLJ20847 | 液泡蛋白排序37个同源物C(酿酒酵母) | - | HPRD,BioGRID | 15509564 |