Summary?
GeneID 91612
Symbol CHURC1
Synonyms C14orf52|My015|chch
Description churchill domain containing 1
Reference MIM:608577|HGNC:HGNC:20099|Ensembl:ENSG00000258289|HPRD:12262|Vega:OTTHUMG00000170218
Gene type protein-coding
Map location 14q23.3
Sherlock p-value 0.68
Fetal beta -0.697
eGene Anterior cingulate cortex BA24
Caudate basal ganglia
Cerebellar Hemisphere
Cerebellum
Cortex
Frontal Cortex BA9
Hippocampus
Hypothalamus
Nucleus accumbens basal ganglia
Putamen basal ganglia
Myers' cis & trans
Meta

Gene in Data Sources
Gene set name Method of gene set Description Info
CV:PGCnp Genome-wide Association Study GWAS
PMID:cooccur High-throughput literature-search Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included.
Literature High-throughput literature-search Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenias Click to show details

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP ID Chromosome Position eGene Gene Entrez ID pvalue qvalue TSS distance eQTL type
rs10498518 chr14 65357541 CHURC1 91612 0 cis
rs12590986 chr14 65357691 CHURC1 91612 0 cis
rs2412065 chr14 65407656 CHURC1 91612 6.73E-5 cis
rs2737844 chr14 65408508 CHURC1 91612 0.01 cis
rs2898885 chr14 65421273 CHURC1 91612 0.06 cis
rs8007405 chr14 65430327 CHURC1 91612 0.08 cis
rs4899158 chr14 65433330 CHURC1 91612 0.08 cis
rs13019783 chr2 212538414 CHURC1 91612 0.02 trans
rs6856051 chr4 71600251 CHURC1 91612 0.19 trans
rs6834662 chr4 71605100 CHURC1 91612 0.05 trans
rs4886102 chr13 59338292 CHURC1 91612 0.19 trans
rs7326372 chr13 59355547 CHURC1 91612 0.19 trans
rs10498518 chr14 65357541 CHURC1 91612 0.14 trans
rs12590986 chr14 65357691 CHURC1 91612 0.1 trans
rs2412065 chr14 65407656 CHURC1 91612 0.01 trans
rs16939915 chr15 87664652 CHURC1 91612 0.09 trans
rs12889323 14 65352592 CHURC1 ENSG00000258289.3 1.382E-6 0 -44926 gtex_brain_ba24
rs10142379 14 65354946 CHURC1 ENSG00000258289.3 7.828E-8 0 -42572 gtex_brain_ba24
rs10144942 14 65355042 CHURC1 ENSG00000258289.3 7.874E-8 0 -42476 gtex_brain_ba24
rs1957426 14 65355575 CHURC1 ENSG00000258289.3 7.982E-10 0 -41943 gtex_brain_ba24
rs11626982 14 65355904 CHURC1 ENSG00000258289.3 8.253E-10 0 -41614 gtex_brain_ba24
rs762071 14 65356644 CHURC1 ENSG00000258289.3 8.441E-10 0 -40874 gtex_brain_ba24
rs743264 14 65356936 CHURC1 ENSG00000258289.3 8.554E-10 0 -40582 gtex_brain_ba24
rs2357867 14 65357303 CHURC1 ENSG00000258289.3 7.831E-8 0 -40215 gtex_brain_ba24
rs2357868 14 65357355 CHURC1 ENSG00000258289.3 8.63E-10 0 -40163 gtex_brain_ba24
rs10498518 14 65357542 CHURC1 ENSG00000258289.3 8.69E-10 0 -39976 gtex_brain_ba24
rs12590986 14 65357692 CHURC1 ENSG00000258289.3 8.685E-10 0 -39826 gtex_brain_ba24
rs1957425 14 65358576 CHURC1 ENSG00000258289.3 8.746E-10 0 -38942 gtex_brain_ba24
rs1957424 14 65358787 CHURC1 ENSG00000258289.3 8.776E-10 0 -38731 gtex_brain_ba24
rs7151401 14 65359480 CHURC1 ENSG00000258289.3 4.924E-10 0 -38038 gtex_brain_ba24
rs7151780 14 65359699 CHURC1 ENSG00000258289.3 8.833E-10 0 -37819 gtex_brain_ba24
rs71123889 14 65359787 CHURC1 ENSG00000258289.3 7.044E-9 0 -37731 gtex_brain_ba24
rs12889417 14 65359884 CHURC1 ENSG00000258289.3 8.833E-10 0 -37634 gtex_brain_ba24
rs12890654 14 65359901 CHURC1 ENSG00000258289.3 8.833E-10 0 -37617 gtex_brain_ba24
rs12881353 14 65363615 CHURC1 ENSG00000258289.3 9.098E-10 0 -33903 gtex_brain_ba24
rs1957421 14 65363804 CHURC1 ENSG00000258289.3 9.13E-10 0 -33714 gtex_brain_ba24
rs1957419 14 65364095 CHURC1 ENSG00000258289.3 9.13E-10 0 -33423 gtex_brain_ba24
rs35176965 14 65365207 CHURC1 ENSG00000258289.3 9.255E-10 0 -32311 gtex_brain_ba24
rs34201584 14 65365226 CHURC1 ENSG00000258289.3 7.032E-10 0 -32292 gtex_brain_ba24
rs12433639 14 65365291 CHURC1 ENSG00000258289.3 9.255E-10 0 -32227 gtex_brain_ba24
rs12436747 14 65365308 CHURC1 ENSG00000258289.3 7.032E-10 0 -32210 gtex_brain_ba24
rs12433641 14 65365311 CHURC1 ENSG00000258289.3 9.255E-10 0 -32207 gtex_brain_ba24
rs1957418 14 65365612 CHURC1 ENSG00000258289.3 9.248E-10 0 -31906 gtex_brain_ba24
rs11848113 14 65366261 CHURC1 ENSG00000258289.3 7.074E-10 0 -31257 gtex_brain_ba24
rs150382953 14 65367255 CHURC1 ENSG00000258289.3 2.112E-10 0 -30263 gtex_brain_ba24
rs201166446 14 65367269 CHURC1 ENSG00000258289.3 2.525E-7 0 -30249 gtex_brain_ba24
rs1024239 14 65367270 CHURC1 ENSG00000258289.3 8.747E-10 0 -30248 gtex_brain_ba24
rs12884463 14 65367703 CHURC1 ENSG00000258289.3 4.712E-10 0 -29815 gtex_brain_ba24
rs11622394 14 65367930 CHURC1 ENSG00000258289.3 7.074E-10 0 -29588 gtex_brain_ba24
rs11627589 14 65368360 CHURC1 ENSG00000258289.3 9.312E-10 0 -29158 gtex_brain_ba24
rs11627688 14 65368526 CHURC1 ENSG00000258289.3 7.074E-10 0 -28992 gtex_brain_ba24
rs1957417 14 65368991 CHURC1 ENSG00000258289.3 7.074E-10 0 -28527 gtex_brain_ba24
rs8021590 14 65371209 CHURC1 ENSG00000258289.3 7.074E-10 0 -26309 gtex_brain_ba24
rs200804505 14 65371361 CHURC1 ENSG00000258289.3 7.074E-10 0 -26157 gtex_brain_ba24
rs8022122 14 65371508 CHURC1 ENSG00000258289.3 7.074E-10 0 -26010 gtex_brain_ba24
rs8021876 14 65371556 CHURC1 ENSG00000258289.3 7.074E-10 0 -25962 gtex_brain_ba24
rs8021998 14 65371597 CHURC1 ENSG00000258289.3 7.074E-10 0 -25921 gtex_brain_ba24
rs12878467 14 65371918 CHURC1 ENSG00000258289.3 7.074E-10 0 -25600 gtex_brain_ba24
rs12897440 14 65371933 CHURC1 ENSG00000258289.3 6.213E-10 0 -25585 gtex_brain_ba24
rs1951488 14 65372213 CHURC1 ENSG00000258289.3 7.074E-10 0 -25305 gtex_brain_ba24
rs1951487 14 65372348 CHURC1 ENSG00000258289.3 7.074E-10 0 -25170 gtex_brain_ba24
rs55719259 14 65372524 CHURC1 ENSG00000258289.3 9.312E-10 0 -24994 gtex_brain_ba24
rs150330200 14 65372530 CHURC1 ENSG00000258289.3 9.312E-10 0 -24988 gtex_brain_ba24
rs11158568 14 65372704 CHURC1 ENSG00000258289.3 3.333E-9 0 -24814 gtex_brain_ba24
rs6573585 14 65373868 CHURC1 ENSG00000258289.3 7.074E-10 0 -23650 gtex_brain_ba24
rs8019971 14 65374464 CHURC1 ENSG00000258289.3 9.467E-10 0 -23054 gtex_brain_ba24
rs8019259 14 65374597 CHURC1 ENSG00000258289.3 9.889E-10 0 -22921 gtex_brain_ba24
rs8019750 14 65374863 CHURC1 ENSG00000258289.3 9.889E-10 0 -22655 gtex_brain_ba24
rs10129479 14 65375180 CHURC1 ENSG00000258289.3 1.028E-7 0 -22338 gtex_brain_ba24
rs10142016 14 65375444 CHURC1 ENSG00000258289.3 1.028E-7 0 -22074 gtex_brain_ba24
rs4902332 14 65375978 CHURC1 ENSG00000258289.3 1.028E-7 0 -21540 gtex_brain_ba24
rs4902333 14 65376086 CHURC1 ENSG00000258289.3 1.028E-7 0 -21432 gtex_brain_ba24
rs17102298 14 65376736 CHURC1 ENSG00000258289.3 1.028E-7 0 -20782 gtex_brain_ba24
rs7154406 14 65377189 CHURC1 ENSG00000258289.3 1.028E-7 0 -20329 gtex_brain_ba24
rs7153503 14 65377483 CHURC1 ENSG00000258289.3 1.647E-7 0 -20035 gtex_brain_ba24
rs7153990 14 65377550 CHURC1 ENSG00000258289.3 1.647E-7 0 -19968 gtex_brain_ba24
rs10139079 14 65378042 CHURC1 ENSG00000258289.3 1.055E-7 0 -19476 gtex_brain_ba24
rs10139595 14 65378259 CHURC1 ENSG00000258289.3 1.028E-7 0 -19259 gtex_brain_ba24
rs10151701 14 65378449 CHURC1 ENSG00000258289.3 1.028E-7 0 -19069 gtex_brain_ba24
rs7160518 14 65378698 CHURC1 ENSG00000258289.3 1.028E-7 0 -18820 gtex_brain_ba24
rs7143432 14 65379146 CHURC1 ENSG00000258289.3 1.65E-7 0 -18372 gtex_brain_ba24
rs7144811 14 65379147 CHURC1 ENSG00000258289.3 1.651E-7 0 -18371 gtex_brain_ba24
rs7143764 14 65379283 CHURC1 ENSG00000258289.3 1.028E-7 0 -18235 gtex_brain_ba24
rs10143017 14 65379618 CHURC1 ENSG00000258289.3 1.028E-7 0 -17900 gtex_brain_ba24
rs28451373 14 65383442 CHURC1 ENSG00000258289.3 1.028E-7 0 -14076 gtex_brain_ba24
rs28508270 14 65383555 CHURC1 ENSG00000258289.3 9.975E-8 0 -13963 gtex_brain_ba24
rs10148687 14 65384276 CHURC1 ENSG00000258289.3 1.028E-7 0 -13242 gtex_brain_ba24
rs4902335 14 65385898 CHURC1 ENSG00000258289.3 1.028E-7 0 -11620 gtex_brain_ba24
rs10132396 14 65386367 CHURC1 ENSG00000258289.3 1.028E-7 0 -11151 gtex_brain_ba24
rs10132742 14 65386922 CHURC1 ENSG00000258289.3 1.028E-7 0 -10596 gtex_brain_ba24
rs4899152 14 65387116 CHURC1 ENSG00000258289.3 1.028E-7 0 -10402 gtex_brain_ba24
rs4902336 14 65387262 CHURC1 ENSG00000258289.3 1.028E-7 0 -10256 gtex_brain_ba24
rs10138534 14 65387989 CHURC1 ENSG00000258289.3 1.028E-7 0 -9529 gtex_brain_ba24
rs59995630 14 65388188 CHURC1 ENSG00000258289.3 1.028E-7 0 -9330 gtex_brain_ba24
rs4902337 14 65388468 CHURC1 ENSG00000258289.3 1.028E-7 0 -9050 gtex_brain_ba24
rs4899153 14 65388711 CHURC1 ENSG00000258289.3 1.034E-7 0 -8807 gtex_brain_ba24
rs10131002 14 65389250 CHURC1 ENSG00000258289.3 1.029E-7 0 -8268 gtex_brain_ba24
rs10141986 14 65389403 CHURC1 ENSG00000258289.3 1.028E-7 0 -8115 gtex_brain_ba24
rs3033504 14 65392542 CHURC1 ENSG00000258289.3 1.216E-7 0 -4976 gtex_brain_ba24
rs2147615 14 65392918 CHURC1 ENSG00000258289.3 1.028E-7 0 -4600 gtex_brain_ba24
rs3949937 14 65393727 CHURC1 ENSG00000258289.3 1.028E-7 0 -3791 gtex_brain_ba24
rs4902338 14 65394068 CHURC1 ENSG00000258289.3 1.028E-7 0 -3450 gtex_brain_ba24
rs67330703 14 65395064 CHURC1 ENSG00000258289.3 1.028E-7 0 -2454 gtex_brain_ba24
rs4902340 14 65395381 CHURC1 ENSG00000258289.3 1.028E-7 0 -2137年 gtex_brain_ba24
rs11331213 14 65395443 CHURC1 ENSG00000258289.3 1.018E-7 0 -2075 gtex_brain_ba24
rs4902341 14 65395625 CHURC1 ENSG00000258289.3 1.028E-7 0 -1893 gtex_brain_ba24
rs4902343 14 65396180 CHURC1 ENSG00000258289.3 1.028E-7 0 -1338 gtex_brain_ba24
rs10147758 14 65396643 CHURC1 ENSG00000258289.3 1.028E-7 0 -875 gtex_brain_ba24
rs10137070 14 65396727 CHURC1 ENSG00000258289.3 1.028E-7 0 -791 gtex_brain_ba24
rs11158569 14 65400069 CHURC1 ENSG00000258289.3 1.028E-7 0 2551 gtex_brain_ba24
rs35743220 14 65400745 CHURC1 ENSG00000258289.3 1.018E-7 0 3227 gtex_brain_ba24
rs35683432 14 65400784 CHURC1 ENSG00000258289.3 8.842E-8 0 3266 gtex_brain_ba24
rs6745 14 65401695 CHURC1 ENSG00000258289.3 1.028E-7 0 4177 gtex_brain_ba24
rs10146885 14 65401819 CHURC1 ENSG00000258289.3 1.373E-7 0 4301 gtex_brain_ba24
rs10149617 14 65402161 CHURC1 ENSG00000258289.3 1.028E-7 0 4643 gtex_brain_ba24
rs4902345 14 65403904 CHURC1 ENSG00000258289.3 1.028E-7 0 6386 gtex_brain_ba24
rs10132858 14 65403978 CHURC1 ENSG00000258289.3 1.028E-7 0 6460 gtex_brain_ba24
rs10133054 14 65404116 CHURC1 ENSG00000258289.3 3.3E-7 0 6598 gtex_brain_ba24
rs10133290 14 65404442 CHURC1 ENSG00000258289.3 1.055E-7 0 6924 gtex_brain_ba24
rs17880380 14 65404899 CHURC1 ENSG00000258289.3 1.028E-7 0 7381 gtex_brain_ba24
rs17881498 14 65404932 CHURC1 ENSG00000258289.3 1.028E-7 0 7414 gtex_brain_ba24
rs12172810 14 65405382 CHURC1 ENSG00000258289.3 1.028E-7 0 7864 gtex_brain_ba24
rs4902346 14 65407160 CHURC1 ENSG00000258289.3 1.028E-7 0 9642 gtex_brain_ba24
rs2412065 14 65407657 CHURC1 ENSG00000258289.3 1.026E-7 0 10139 gtex_brain_ba24
rs3831077 14 65410200 CHURC1 ENSG00000258289.3 1.464E-7 0 12682 gtex_brain_ba24
rs2296327 14 65410547 CHURC1 ENSG00000258289.3 1.938E-7 0 13029 gtex_brain_ba24
rs3742599 14 65411908 CHURC1 ENSG00000258289.3 2.988E-7 0 14390 gtex_brain_ba24
rs1886506 14 65415366 CHURC1 ENSG00000258289.3 2.665E-7 0 17848 gtex_brain_ba24
rs373172394 14 65415472 CHURC1 ENSG00000258289.3 6.195E-7 0 17954 gtex_brain_ba24
rs111372722 14 65431401 CHURC1 ENSG00000258289.3 6.78E-7 0 33883 gtex_brain_ba24
rs2828 14 65336050 CHURC1 ENSG00000258289.3 1.619E-6 0 -61468 gtex_brain_putamen_basal
rs12889323 14 65352592 CHURC1 ENSG00000258289.3 9.705E-9 0 -44926 gtex_brain_putamen_basal
rs10142379 14 65354946 CHURC1 ENSG00000258289.3 3.121E-8 0 -42572 gtex_brain_putamen_basal
rs10144942 14 65355042 CHURC1 ENSG00000258289.3 3.092E-8 0 -42476 gtex_brain_putamen_basal
rs1957426 14 65355575 CHURC1 ENSG00000258289.3 3.31E-11 0 -41943 gtex_brain_putamen_basal
rs11626982 14 65355904 CHURC1 ENSG00000258289.3 3.35E-11 0 -41614 gtex_brain_putamen_basal
rs762071 14 65356644 CHURC1 ENSG00000258289.3 3.274E-11 0 -40874 gtex_brain_putamen_basal
rs743264 14 65356936 CHURC1 ENSG00000258289.3 3.267E-11 0 -40582 gtex_brain_putamen_basal
rs743263 14 65357098 CHURC1 ENSG00000258289.3 5.066E-9 0 -40420 gtex_brain_putamen_basal
rs2357867 14 65357303 CHURC1 ENSG00000258289.3 3.279E-11 0 -40215 gtex_brain_putamen_basal
rs2357868 14 65357355 CHURC1 ENSG00000258289.3 3.256E-11 0 -40163 gtex_brain_putamen_basal
rs3066783 14 65357498 CHURC1 ENSG00000258289.3 2.537E-6 0 -40020 gtex_brain_putamen_basal
rs10498518 14 65357542 CHURC1 ENSG00000258289.3 3.256E-11 0 -39976 gtex_brain_putamen_basal
rs12590986 14 65357692 CHURC1 ENSG00000258289.3 3.249E-11 0 -39826 gtex_brain_putamen_basal
rs1957425 14 65358576 CHURC1 ENSG00000258289.3 3.249E-11 0 -38942 gtex_brain_putamen_basal
rs1957424 14 65358787 CHURC1 ENSG00000258289.3 3.249E-11 0 -38731 gtex_brain_putamen_basal
rs1957423 14 65358789 CHURC1 ENSG00000258289.3 2.273E-9 0 -38729 gtex_brain_putamen_basal
rs7151401 14 65359480 CHURC1 ENSG00000258289.3 4.341E-11 0 -38038 gtex_brain_putamen_basal
rs7151780 14 65359699 CHURC1 ENSG00000258289.3 3.241 e-11 0 -37819 gtex_brain_putamen_basal
rs71123889 14 65359787 CHURC1 ENSG00000258289.3 2.307E-11 0 -37731 gtex_brain_putamen_basal
rs12889417 14 65359884 CHURC1 ENSG00000258289.3 3.241 e-11 0 -37634 gtex_brain_putamen_basal
rs12890654 14 65359901 CHURC1 ENSG00000258289.3 3.241 e-11 0 -37617 gtex_brain_putamen_basal
rs12881353 14 65363615 CHURC1 ENSG00000258289.3 3.219E-11 0 -33903 gtex_brain_putamen_basal
rs1957421 14 65363804 CHURC1 ENSG00000258289.3 8.349E-11 0 -33714 gtex_brain_putamen_basal
rs1957419 14 65364095 CHURC1 ENSG00000258289.3 3.219E-11 0 -33423 gtex_brain_putamen_basal
rs34969442 14 65365066 CHURC1 ENSG00000258289.3 2.251E-9 0 -32452 gtex_brain_putamen_basal
rs35176965 14 65365207 CHURC1 ENSG00000258289.3 3.191E-11 0 -32311 gtex_brain_putamen_basal
rs34201584 14 65365226 CHURC1 ENSG00000258289.3 3.049E-12 0 -32292 gtex_brain_putamen_basal
rs12433639 14 65365291 CHURC1 ENSG00000258289.3 3.191E-11 0 -32227 gtex_brain_putamen_basal
rs12436747 14 65365308 CHURC1 ENSG00000258289.3 3.049E-12 0 -32210 gtex_brain_putamen_basal
rs12433641 14 65365311 CHURC1 ENSG00000258289.3 3.191E-11 0 -32207 gtex_brain_putamen_basal
rs1957418 14 65365612 CHURC1 ENSG00000258289.3 3.205E-11 0 -31906 gtex_brain_putamen_basal
rs11848113 14 65366261 CHURC1 ENSG00000258289.3 3.06E-12 0 -31257 gtex_brain_putamen_basal
rs12878229 14 65366485 CHURC1 ENSG00000258289.3 2.247E-9 0 -31033 gtex_brain_putamen_basal
rs150382953 14 65367255 CHURC1 ENSG00000258289.3 6.787E-12 0 -30263 gtex_brain_putamen_basal
rs201166446 14 65367269 CHURC1 ENSG00000258289.3 4.423E-10 0 -30249 gtex_brain_putamen_basal
rs1024239 14 65367270 CHURC1 ENSG00000258289.3 7.492E-11 0 -30248 gtex_brain_putamen_basal
rs12884463 14 65367703 CHURC1 ENSG00000258289.3 2.932E-12 0 -29815 gtex_brain_putamen_basal
rs11622394 14 65367930 CHURC1 ENSG00000258289.3 3.06E-12 0 -29588 gtex_brain_putamen_basal
rs11627589 14 65368360 CHURC1 ENSG00000258289.3 3.205E-11 0 -29158 gtex_brain_putamen_basal
rs11627688 14 65368526 CHURC1 ENSG00000258289.3 3.06E-12 0 -28992 gtex_brain_putamen_basal
rs1957417 14 65368991 CHURC1 ENSG00000258289.3 3.06E-12 0 -28527 gtex_brain_putamen_basal
rs11308429 14 65370389 CHURC1 ENSG00000258289.3 1.997E-9 0 -27129 gtex_brain_putamen_basal
rs8016174 14 65370481 CHURC1 ENSG00000258289.3 2.247E-9 0 -27037 gtex_brain_putamen_basal
rs12891652 14 65370803 CHURC1 ENSG00000258289.3 2.247E-9 0 -26715 gtex_brain_putamen_basal
rs8021590 14 65371209 CHURC1 ENSG00000258289.3 3.06E-12 0 -26309 gtex_brain_putamen_basal
rs200804505 14 65371361 CHURC1 ENSG00000258289.3 3.06E-12 0 -26157 gtex_brain_putamen_basal
rs8022122 14 65371508 CHURC1 ENSG00000258289.3 3.06E-12 0 -26010 gtex_brain_putamen_basal
rs8021876 14 65371556 CHURC1 ENSG00000258289.3 3.06E-12 0 -25962 gtex_brain_putamen_basal
rs8021998 14 65371597 CHURC1 ENSG00000258289.3 3.06E-12 0 -25921 gtex_brain_putamen_basal
rs12878467 14 65371918 CHURC1 ENSG00000258289.3 3.06E-12 0 -25600 gtex_brain_putamen_basal
rs12897440 14 65371933 CHURC1 ENSG00000258289.3 4.523E-12 0 -25585 gtex_brain_putamen_basal
rs1951488 14 65372213 CHURC1 ENSG00000258289.3 3.06E-12 0 -25305 gtex_brain_putamen_basal
rs1951487 14 65372348 CHURC1 ENSG00000258289.3 3.06E-12 0 -25170 gtex_brain_putamen_basal
rs55719259 14 65372524 CHURC1 ENSG00000258289.3 3.205E-11 0 -24994 gtex_brain_putamen_basal
rs150330200 14 65372530 CHURC1 ENSG00000258289.3 3.205E-11 0 -24988 gtex_brain_putamen_basal
rs56271264 14 65372531 CHURC1 ENSG00000258289.3 7.076E-7 0 -24987 gtex_brain_putamen_basal
rs11158568 14 65372704 CHURC1 ENSG00000258289.3 2.448E-9 0 -24814 gtex_brain_putamen_basal
rs6573585 14 65373868 CHURC1 ENSG00000258289.3 3.06E-12 0 -23650 gtex_brain_putamen_basal
rs8019971 14 65374464 CHURC1 ENSG00000258289.3 1.226E-11 0 -23054 gtex_brain_putamen_basal
rs8019259 14 65374597 CHURC1 ENSG00000258289.3 1.26E-11 0 -22921 gtex_brain_putamen_basal
rs8019750 14 65374863 CHURC1 ENSG00000258289.3 1.26E-11 0 -22655 gtex_brain_putamen_basal
rs8003530 14 65375085 CHURC1 ENSG00000258289.3 2.053E-9 0 -22433 gtex_brain_putamen_basal
rs10129479 14 65375180 CHURC1 ENSG00000258289.3 1.39E-8 0 -22338 gtex_brain_putamen_basal
rs10142016 14 65375444 CHURC1 ENSG00000258289.3 4.883E-8 0 -22074 gtex_brain_putamen_basal
rs12879744 14 65375802 CHURC1 ENSG00000258289.3 2.247E-9 0 -21716 gtex_brain_putamen_basal
rs4902332 14 65375978 CHURC1 ENSG00000258289.3 1.39E-8 0 -21540 gtex_brain_putamen_basal
rs4902333 14 65376086 CHURC1 ENSG00000258289.3 1.39E-8 0 -21432 gtex_brain_putamen_basal
rs17102298 14 65376736 CHURC1 ENSG00000258289.3 1.304E-8 0 -20782 gtex_brain_putamen_basal
rs7154406 14 65377189 CHURC1 ENSG00000258289.3 1.39E-8 0 -20329 gtex_brain_putamen_basal
rs7153503 14 65377483 CHURC1 ENSG00000258289.3 2.158E-7 0 -20035 gtex_brain_putamen_basal
rs7153990 14 65377550 CHURC1 ENSG00000258289.3 2.078E-7 0 -19968 gtex_brain_putamen_basal
rs10139079 14 65378042 CHURC1 ENSG00000258289.3 1.392E-8 0 -19476 gtex_brain_putamen_basal
rs10139435 14 65378120 CHURC1 ENSG00000258289.3 2.646E-6 0 -19398 gtex_brain_putamen_basal
rs10139595 14 65378259 CHURC1 ENSG00000258289.3 1.39E-8 0 -19259 gtex_brain_putamen_basal
rs10151701 14 65378449 CHURC1 ENSG00000258289.3 1.39E-8 0 -19069 gtex_brain_putamen_basal
rs7160518 14 65378698 CHURC1 ENSG00000258289.3 1.39E-8 0 -18820 gtex_brain_putamen_basal
rs7143358 14 65378962 CHURC1 ENSG00000258289.3 1.963E-8 0 -18556 gtex_brain_putamen_basal
rs7143432 14 65379146 CHURC1 ENSG00000258289.3 2.494E-7 0 -18372 gtex_brain_putamen_basal
rs7144811 14 65379147 CHURC1 ENSG00000258289.3 2.504E-7 0 -18371 gtex_brain_putamen_basal
rs7143764 14 65379283 CHURC1 ENSG00000258289.3 1.39E-8 0 -18235 gtex_brain_putamen_basal
rs10143017 14 65379618 CHURC1 ENSG00000258289.3 1.39E-8 0 -17900 gtex_brain_putamen_basal
rs28451373 14 65383442 CHURC1 ENSG00000258289.3 1.39E-8 0 -14076 gtex_brain_putamen_basal
rs28508270 14 65383555 CHURC1 ENSG00000258289.3 1.375E-8 0 -13963 gtex_brain_putamen_basal
rs10148687 14 65384276 CHURC1 ENSG00000258289.3 1.39E-8 0 -13242 gtex_brain_putamen_basal
rs4902334 14 65385820 CHURC1 ENSG00000258289.3 2.247E-9 0 -11698 gtex_brain_putamen_basal
rs4902335 14 65385898 CHURC1 ENSG00000258289.3 1.396E-8 0 -11620 gtex_brain_putamen_basal
rs10132396 14 65386367 CHURC1 ENSG00000258289.3 1.39E-8 0 -11151 gtex_brain_putamen_basal
rs10132742 14 65386922 CHURC1 ENSG00000258289.3 1.39E-8 0 -10596 gtex_brain_putamen_basal
rs4899152 14 65387116 CHURC1 ENSG00000258289.3 1.39E-8 0 -10402 gtex_brain_putamen_basal
rs4902336 14 65387262 CHURC1 ENSG00000258289.3 1.39E-8 0 -10256 gtex_brain_putamen_basal
rs10136196 14 65387953 CHURC1 ENSG00000258289.3 7.558E-9 0 -9565 gtex_brain_putamen_basal
rs10138534 14 65387989 CHURC1 ENSG00000258289.3 1.39E-8 0 -9529 gtex_brain_putamen_basal
rs59995630 14 65388188 CHURC1 ENSG00000258289.3 1.39E-8 0 -9330 gtex_brain_putamen_basal
rs4902337 14 65388468 CHURC1 ENSG00000258289.3 1.39E-8 0 -9050 gtex_brain_putamen_basal
rs4899153 14 65388711 CHURC1 ENSG00000258289.3 1.727E-8 0 -8807 gtex_brain_putamen_basal
rs10131002 14 65389250 CHURC1 ENSG00000258289.3 1.675E-8 0 -8268 gtex_brain_putamen_basal
rs10141986 14 65389403 CHURC1 ENSG00000258289.3 1.39E-8 0 -8115 gtex_brain_putamen_basal
rs2147616 14 65391102 CHURC1 ENSG00000258289.3 2.247E-9 0 -6416 gtex_brain_putamen_basal
rs4243629 14 65392367 CHURC1 ENSG00000258289.3 2.247E-9 0 -5151 gtex_brain_putamen_basal
rs2898874 14 65392474 CHURC1 ENSG00000258289.3 2.247E-9 0 -5044 gtex_brain_putamen_basal
rs3033504 14 65392542 CHURC1 ENSG00000258289.3 1.39E-8 0 -4976 gtex_brain_putamen_basal
rs2147615 14 65392918 CHURC1 ENSG00000258289.3 1.39E-8 0 -4600 gtex_brain_putamen_basal
rs2147612 14 65393634 CHURC1 ENSG00000258289.3 2.484E-9 0 -3884 gtex_brain_putamen_basal
rs3949937 14 65393727 CHURC1 ENSG00000258289.3 1.39E-8 0 -3791 gtex_brain_putamen_basal
rs4902338 14 65394068 CHURC1 ENSG00000258289.3 1.39E-8 0 -3450 gtex_brain_putamen_basal
rs4902339 14 65394290 CHURC1 ENSG00000258289.3 2.247E-9 0 -3228年 gtex_brain_putamen_basal
rs67330703 14 65395064 CHURC1 ENSG00000258289.3 1.394E-8 0 -2454 gtex_brain_putamen_basal
rs4902340 14 65395381 CHURC1 ENSG00000258289.3 1.39E-8 0 -2137年 gtex_brain_putamen_basal
rs11331213 14 65395443 CHURC1 ENSG00000258289.3 1.55E-8 0 -2075 gtex_brain_putamen_basal
rs4902341 14 65395625 CHURC1 ENSG00000258289.3 1.39E-8 0 -1893 gtex_brain_putamen_basal
rs4902343 14 65396180 CHURC1 ENSG00000258289.3 1.39E-8 0 -1338 gtex_brain_putamen_basal
rs10147758 14 65396643 CHURC1 ENSG00000258289.3 1.39E-8 0 -875 gtex_brain_putamen_basal
rs10137070 14 65396727 CHURC1 ENSG00000258289.3 1.39E-8 0 -791 gtex_brain_putamen_basal
rs1951993 14 65396924 CHURC1 ENSG00000258289.3 2.247E-9 0 -594 gtex_brain_putamen_basal
rs8943 14 65399263 CHURC1 ENSG00000258289.3 1.691E-8 0 1745 gtex_brain_putamen_basal
rs9281 14 65399291 CHURC1 ENSG00000258289.3 1.691E-8 0 1773 gtex_brain_putamen_basal
rs8984 14 65399306 CHURC1 ENSG00000258289.3 1.691E-8 0 1788 gtex_brain_putamen_basal
rs11158569 14 65400069 CHURC1 ENSG00000258289.3 1.39E-8 0 2551 gtex_brain_putamen_basal
rs1064108 14 65400265 CHURC1 ENSG00000258289.3 2.247E-9 0 2747 gtex_brain_putamen_basal
rs35743220 14 65400745 CHURC1 ENSG00000258289.3 1.28E-8 0 3227 gtex_brain_putamen_basal
rs35683432 14 65400784 CHURC1 ENSG00000258289.3 1.378E-8 0 3266 gtex_brain_putamen_basal
rs6745 14 65401695 CHURC1 ENSG00000258289.3 1.39E-8 0 4177 gtex_brain_putamen_basal
rs10146885 14 65401819 CHURC1 ENSG00000258289.3 1.946E-6 0 4301 gtex_brain_putamen_basal
rs10149617 14 65402161 CHURC1 ENSG00000258289.3 1.39E-8 0 4643 gtex_brain_putamen_basal
rs4902345 14 65403904 CHURC1 ENSG00000258289.3 1.39E-8 0 6386 gtex_brain_putamen_basal
rs10132858 14 65403978 CHURC1 ENSG00000258289.3 1.39E-8 0 6460 gtex_brain_putamen_basal
rs10133054 14 65404116 CHURC1 ENSG00000258289.3 1.178E-7 0 6598 gtex_brain_putamen_basal
rs10133290 14 65404442 CHURC1 ENSG00000258289.3 1.392E-8 0 6924 gtex_brain_putamen_basal
rs17880380 14 65404899 CHURC1 ENSG00000258289.3 1.39E-8 0 7381 gtex_brain_putamen_basal
rs17881498 14 65404932 CHURC1 ENSG00000258289.3 1.39E-8 0 7414 gtex_brain_putamen_basal
rs12172810 14 65405382 CHURC1 ENSG00000258289.3 1.39E-8 0 7864 gtex_brain_putamen_basal
rs2071566 14 65407000 CHURC1 ENSG00000258289.3 2.247E-9 0 9482 gtex_brain_putamen_basal
rs4902346 14 65407160 CHURC1 ENSG00000258289.3 1.39E-8 0 9642 gtex_brain_putamen_basal
rs2412065 14 65407657 CHURC1 ENSG00000258289.3 1.395E-8 0 10139 gtex_brain_putamen_basal
rs10145845 14 65407973 CHURC1 ENSG00000258289.3 2.454E-9 0 10455 gtex_brain_putamen_basal
rs2737844 14 65408509 CHURC1 ENSG00000258289.3 2.871E-9 0 10991 gtex_brain_putamen_basal
rs2296327 14 65410547 CHURC1 ENSG00000258289.3 3.849E-8 0 13029 gtex_brain_putamen_basal
rs2277501 14 65412441 CHURC1 ENSG00000258289.3 8.53E-10 0 14923 gtex_brain_putamen_basal
rs3087955 14 65412748 CHURC1 ENSG00000258289.3 3.945E-8 0 15230 gtex_brain_putamen_basal
rs3759681 14 65413606 CHURC1 ENSG00000258289.3 2.151E-8 0 16088 gtex_brain_putamen_basal
rs2296326 14 65414372 CHURC1 ENSG00000258289.3 1.835E-9 0 16854 gtex_brain_putamen_basal
rs11540873 14 65414659 CHURC1 ENSG00000258289.3 2.175E-8 0 17141 gtex_brain_putamen_basal
rs11540872 14 65414738 CHURC1 ENSG00000258289.3 1.47E-6 0 17220 gtex_brain_putamen_basal
rs1886506 14 65415366 CHURC1 ENSG00000258289.3 1.862E-6 0 17848 gtex_brain_putamen_basal
rs45454295 14 65419293 CHURC1 ENSG00000258289.3 2.176E-8 0 21775 gtex_brain_putamen_basal
rs11623886 14 65423262 CHURC1 ENSG00000258289.3 5.982E-9 0 25744 gtex_brain_putamen_basal
rs7359095 14 65426794 CHURC1 ENSG00000258289.3 1.142E-7 0 29276 gtex_brain_putamen_basal
rs2412106 14 65427810 CHURC1 ENSG00000258289.3 9.281E-8 0 30292 gtex_brain_putamen_basal
rs34852276 14 65428165 CHURC1 ENSG00000258289.3 4.256E-8 0 30647 gtex_brain_putamen_basal
rs6573586 14 65428658 CHURC1 ENSG00000258289.3 6.266E-7 0 31140 gtex_brain_putamen_basal
rs4899155 14 65429186 CHURC1 ENSG00000258289.3 2.408E-7 0 31668 gtex_brain_putamen_basal
rs2412105 14 65429519 CHURC1 ENSG00000258289.3 3.137E-8 0 32001 gtex_brain_putamen_basal
rs8007405 14 65430328 CHURC1 ENSG00000258289.3 4.045E-7 0 32810 gtex_brain_putamen_basal
rs67447889 14 65431248 CHURC1 ENSG00000258289.3 9.071E-7 0 33730 gtex_brain_putamen_basal
rs4899158 14 65433331 CHURC1 ENSG00000258289.3 1.099E-6 0 35813 gtex_brain_putamen_basal

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

(B基因表达的时空变化rainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway name Pathway size # SZGR 2.0 genes in pathway Info
WANG LMO4 TARGETS DN 352 225 All SZGR 2.0 genes in this pathway
OSMAN BLADDER CANCER UP 404 246 All SZGR 2.0 genes in this pathway
GINESTIER BREAST CANCER ZNF217 AMPLIFIED UP 78 48 All SZGR 2.0 genes in this pathway
NUYTTEN NIPP1 TARGETS UP 769 437 All SZGR 2.0 genes in this pathway
SCHAEFFER PROSTATE DEVELOPMENT 6HR UP 176 115 All SZGR 2.0 genes in this pathway
RADMACHER AML PROGNOSIS 78 52 All SZGR 2.0 genes in this pathway
ZHENG BOUND BY FOXP3 491 310 All SZGR 2.0 genes in this pathway
LIM MAMMARY STEM CELL DN 428 246 All SZGR 2.0 genes in this pathway