基因页:mapt
Summary?
基因 | 4137 |
Symbol | mapt |
同义词 | ddpac | ftdp-17 | maptl | mstd | mtbt1 | mtbt2 | ppnd | ppp1r103 | tau |
描述 | microtubule associated protein tau |
参考 | MIM:157140|HGNC:HGNC:6893|Ensembl:ENSG00000186868|HPRD:01142|Vega:Otthumg00000168833 |
基因type | 蛋白质编码 |
地图位置 | 17q21.1 |
Sherlock p-value | 0.004 |
胎儿β | -2.487 |
主持人 | 小脑半球 Cerebellum Cortex Frontal Cortex BA9 Myers' cis & trans 元 |
支持 | STRUCTURAL PLASTICITY g2cdb.humanpsd G2CDB.HUMANPSP COMPOSITESET potential synaptic genes |
基因in Data Sources
基因set name | 基因组方法 | 描述 | 信息 |
---|---|---|---|
简历:PGCNP | 全基因组协会研究 | GWAS | |
CV:PheWAS | 全球整个关联研究(PHEWAS) | 157个与精神分裂症相关的SNP | 1 |
PMID:cooccur | 高通量文献搜索 | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
文学 | 高通量文献搜索 | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenic,schizophrenias | 点击显示详细信息 |
go_annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 8 | |
网络 | Shortest path distance of core genes in the Human protein-protein interaction network | PPI网络中最短路径的贡献:3.6916 |
Section I. Genetics and epigenetics annotation
CV:PheWAS
SNP ID | Chromosome | position | 等位基因 | p | 功能 | 基因 | Up/Down Distance |
---|---|---|---|---|---|---|---|
RS242557 | 17 | 0 | null | 1.576 | mapt | null |
EQTL注释
SNP ID | Chromosome | position | 主持人 | Gene Entrez ID | PVALUE | QVALUE | TSS距离 | EQTL类型 |
---|---|---|---|---|---|---|---|---|
rs12947718 | CHR17 | 43493100 | mapt | 4137 | 0 | 顺式 | ||
RS17631303 | CHR17 | 43516401 | mapt | 4137 | 0 | 顺式 | ||
RS3946526 | CHR17 | 43541655 | mapt | 4137 | 1.764E-4 | 顺式 | ||
RS2696425 | CHR17 | 43666905 | mapt | 4137 | 8.37E-4 | 顺式 | ||
RS418891 | CHR17 | 43693537 | mapt | 4137 | 0 | 顺式 | ||
rs413778 | CHR17 | 43716884 | mapt | 4137 | 0 | 顺式 | ||
RS453997 | CHR17 | 43727060 | mapt | 4137 | 5.899E-4 | 顺式 | ||
RS422112 | CHR17 | 43728136 | mapt | 4137 | 0 | 顺式 | ||
RS241033 | CHR17 | 43733982 | mapt | 4137 | 5.899E-4 | 顺式 | ||
RS241032 | CHR17 | 43734144 | mapt | 4137 | 0 | 顺式 | ||
RS241031 | CHR17 | 43734303 | mapt | 4137 | 5.899E-4 | 顺式 | ||
RS17760733 | CHR17 | 43746275 | mapt | 4137 | 0.01 | 顺式 | ||
RS17687571 | CHR17 | 43750009 | mapt | 4137 | 0 | 顺式 | ||
rs17687667 | CHR17 | 43754098 | mapt | 4137 | 6.42E-4 | 顺式 | ||
RS17688002 | CHR17 | 43762593 | mapt | 4137 | 5.899E-4 | 顺式 | ||
rs17688068 | CHR17 | 43763934 | mapt | 4137 | 0.02 | 顺式 | ||
rs17688391 | CHR17 | 43772108 | mapt | 4137 | 9.156E-4 | 顺式 | ||
RS17688434 | CHR17 | 43772539 | mapt | 4137 | 0 | 顺式 | ||
rs12150610 | CHR17 | 43775478 | mapt | 4137 | 0 | 顺式 | ||
rs12150547 | CHR17 | 43775545 | mapt | 4137 | 5.899E-4 | 顺式 | ||
rs17762165 | CHR17 | 43778601 | mapt | 4137 | 8.734e-4 | 顺式 | ||
RS17688922 | CHR17 | 43779350 | mapt | 4137 | 0 | 顺式 | ||
RS17688944 | CHR17 | 43779418 | mapt | 4137 | 5.878E-4 | 顺式 | ||
rs1526128 | CHR17 | 43779623 | mapt | 4137 | 7.6e-4 | 顺式 | ||
rs1526129 | CHR17 | 43779656 | mapt | 4137 | 0 | 顺式 | ||
rs1724425 | CHR17 | 43781746 | mapt | 4137 | 0.01 | 顺式 | ||
RS17563501 | CHR17 | 43801694 | mapt | 4137 | 7.043E-4 | 顺式 | ||
RS2902662 | CHR17 | 43806924 | mapt | 4137 | 0 | 顺式 | ||
RS17563787 | CHR17 | 43813251 | mapt | 4137 | 5.878E-4 | 顺式 | ||
rs17563827 | CHR17 | 43818221 | mapt | 4137 | 7.176E-4 | 顺式 | ||
RS12150672 | CHR17 | 43826636 | mapt | 4137 | 0.01 | 顺式 | ||
RS17426106 | CHR17 | 43828934 | mapt | 4137 | 5.452E-4 | 顺式 | ||
RS17426195 | CHR17 | 43832366 | mapt | 4137 | 7.513E-4 | 顺式 | ||
rs6503447 | CHR17 | 43834911 | mapt | 4137 | 0.06 | 顺式 | ||
rs4074462 | CHR17 | 43855227 | mapt | 4137 | 0 | 顺式 | ||
rs17689471 | CHR17 | 43892972 | mapt | 4137 | 7.043E-4 | 顺式 | ||
rs17762769 | CHR17 | 43893402 | mapt | 4137 | 0 | 顺式 | ||
RS171440 | CHR17 | 43893486 | mapt | 4137 | 0.08 | 顺式 | ||
rs8072451 | CHR17 | 43893715 | mapt | 4137 | 0 | 顺式 | ||
rs4277389 | CHR17 | 43895652 | mapt | 4137 | 5.878E-4 | 顺式 | ||
rs17689824 | CHR17 | 43904396 | mapt | 4137 | 6.987E-4 | 顺式 | ||
rs17763086 | CHR17 | 43905480 | mapt | 4137 | 0.02 | 顺式 | ||
rs17689882 | CHR17 | 43906827 | mapt | 4137 | 5.878E-4 | 顺式 | ||
RS17769552 | CHR17 | 43927289 | mapt | 4137 | 9.779E-4 | 顺式 | ||
RS916793 | CHR17 | 43954685 | mapt | 4137 | 7.043E-4 | 顺式 | ||
RS17649553 | CHR17 | 43994647 | mapt | 4137 | 0 | 顺式 | ||
RS17649641 | CHR17 | 43997371 | mapt | 4137 | 0 | 顺式 | ||
RS17564223 | CHR17 | 43997519 | mapt | 4137 | 0 | 顺式 | ||
RS17649954 | CHR17 | 44001660 | mapt | 4137 | 5.441E-4 | 顺式 | ||
RS17564619 | CHR17 | 44002137 | mapt | 4137 | 9.354e-4 | 顺式 | ||
RS17650063 | CHR17 | 44002554 | mapt | 4137 | 7.043E-4 | 顺式 | ||
rs17564780 | CHR17 | 44005412 | mapt | 4137 | 7.043E-4 | 顺式 | ||
rs17650381 | CHR17 | 44013023 | mapt | 4137 | 0 | 顺式 | ||
rs12150111 | CHR17 | 44013937 | mapt | 4137 | 7.043E-4 | 顺式 | ||
rs2316784 | CHR17 | 44021698 | mapt | 4137 | 8.505E-4 | 顺式 | ||
RS4327091 | CHR17 | 44021716 | mapt | 4137 | 5.878E-4 | 顺式 | ||
RS242559 | CHR17 | 44025887 | mapt | 4137 | 0 | 顺式 | ||
RS17571718 | CHR17 | 44032767 | mapt | 4137 | 4.555e-4 | 顺式 | ||
RS17571739 | CHR17 | 44032914 | mapt | 4137 | 5.878E-4 | 顺式 | ||
RS17650872 | CHR17 | 44039515 | mapt | 4137 | 7.043E-4 | 顺式 | ||
rs17572169 | CHR17 | 44045973 | mapt | 4137 | 5.878E-4 | 顺式 | ||
rs17651213 | CHR17 | 44051923 | mapt | 4137 | 0.01 | 顺式 | ||
rs17572361 | CHR17 | 44052008 | mapt | 4137 | 0 | 顺式 | ||
RS17572851 | CHR17 | 44063765 | mapt | 4137 | 0 | 顺式 | ||
RS17572893 | CHR17 | 44064207 | mapt | 4137 | 5.878E-4 | 顺式 | ||
RS17573175 | CHR17 | 44071088 | mapt | 4137 | 8.2E-4 | 顺式 | ||
RS1078268 | CHR17 | 44075900 | mapt | 4137 | 0 | 顺式 | ||
rs8070723 | CHR17 | 44081063 | mapt | 4137 | 5.878E-4 | 顺式 | ||
RS17652449 | CHR17 | 44088936 | mapt | 4137 | 0 | 顺式 | ||
RS17652502 | CHR17 | 44094470 | mapt | 4137 | 7.043E-4 | 顺式 | ||
RS17574228 | CHR17 | 44104508 | mapt | 4137 | 5.878E-4 | 顺式 | ||
rs1076222 | CHR17 | 44109768 | mapt | 4137 | 0 | 顺式 | ||
rs7350980 | CHR17 | 44110270 | mapt | 4137 | 0 | 顺式 | ||
RS4597358 | CHR17 | 44110669 | mapt | 4137 | 5.878E-4 | 顺式 | ||
RS17653162 | CHR17 | 44111826 | mapt | 4137 | 3.466E-4 | 顺式 | ||
RS17574824 | CHR17 | 44115106 | mapt | 4137 | 0 | 顺式 | ||
RS12150090 | CHR17 | 44115885 | mapt | 4137 | 7.043E-4 | 顺式 | ||
RS7221390 | CHR17 | 44116949 | mapt | 4137 | 7.043E-4 | 顺式 | ||
RS17575556 | CHR17 | 44135826 | mapt | 4137 | 8.802E-4 | 顺式 | ||
RS17659881 | CHR17 | 44157596 | mapt | 4137 | 7.043E-4 | 顺式 | ||
RS17660132 | CHR17 | 44165802 | mapt | 4137 | 3.611E-4 | 顺式 | ||
RS17577094 | CHR17 | 44187491 | mapt | 4137 | 0 | 顺式 | ||
RS17660907 | CHR17 | 44191084 | mapt | 4137 | 0 | 顺式 | ||
rs8070942 | CHR17 | 44208673 | mapt | 4137 | 5.515E-4 | 顺式 | ||
rs2532316 | CHR17 | 44213711 | mapt | 4137 | 5.878E-4 | 顺式 | ||
RS2696600 | CHR17 | 44216225 | mapt | 4137 | 0 | 顺式 | ||
RS1406068 | CHR17 | 44234525 | mapt | 4137 | 5.878E-4 | 顺式 | ||
rs2532292 | CHR17 | 44237067 | mapt | 4137 | 7.043E-4 | 顺式 | ||
rs2532286 | CHR17 | 44241663 | mapt | 4137 | 7.544E-4 | 顺式 | ||
rs2532276 | CHR17 | 44246623 | mapt | 4137 | 0 | 顺式 | ||
rs2532275 | CHR17 | 44246996 | mapt | 4137 | 7.043E-4 | 顺式 | ||
RS2532259 | CHR17 | 44253363 | mapt | 4137 | 7.043E-4 | 顺式 | ||
rs2732646 | CHR17 | 44254378 | mapt | 4137 | 5.878E-4 | 顺式 | ||
rs2732589 | CHR17 | 44266021 | mapt | 4137 | 0 | 顺式 | ||
RS1918788 | CHR17 | 44267616 | mapt | 4137 | 7.043E-4 | 顺式 | ||
rs2732596 | CHR17 | 44269545 | mapt | 4137 | 0.01 | 顺式 | ||
RS2732675 | CHR17 | 44280187 | mapt | 4137 | 0 | 顺式 | ||
RS2732674 | CHR17 | 44280696 | mapt | 4137 | 0.01 | 顺式 | ||
RS2668695 | CHR17 | 44292125 | mapt | 4137 | 6.7E-4 | 顺式 | ||
rs2532332 | CHR17 | 44347726 | mapt | 4137 | 0.08 | 顺式 | ||
RS2732706 | CHR17 | 44351685 | mapt | 4137 | 0 | 顺式 | ||
RS2668624 | CHR17 | 44352871 | mapt | 4137 | 0.01 | 顺式 | ||
RS199436 | CHR17 | 44789284 | mapt | 4137 | 0.17 | 顺式 | ||
RS142167 | CHR17 | 44795233 | mapt | 4137 | 0.12 | 顺式 | ||
RS199452 | CHR17 | 44801339 | mapt | 4137 | 0.13 | 顺式 | ||
RS199449 | CHR17 | 44808901 | mapt | 4137 | 0.15 | 顺式 | ||
RS199535 | CHR17 | 44822661 | mapt | 4137 | 0.04 | 顺式 | ||
rs199515 | CHR17 | 44856640 | mapt | 4137 | 0.1 | 顺式 | ||
rs12947718 | CHR17 | 43493100 | mapt | 4137 | 0.17 | trans | ||
RS17631303 | CHR17 | 43516401 | mapt | 4137 | 0.1 | trans | ||
RS3946526 | CHR17 | 43541655 | mapt | 4137 | 0.02 | trans | ||
RS2696425 | CHR17 | 43666905 | mapt | 4137 | 0.06 | trans | ||
RS418891 | CHR17 | 43693537 | mapt | 4137 | 0.17 | trans | ||
rs413778 | CHR17 | 43716884 | mapt | 4137 | 0.13 | trans | ||
RS453997 | CHR17 | 43727060 | mapt | 4137 | 0.05 | trans | ||
RS422112 | CHR17 | 43728136 | mapt | 4137 | 0.13 | trans | ||
RS241033 | CHR17 | 43733982 | mapt | 4137 | 0.05 | trans | ||
RS241031 | CHR17 | 43734303 | mapt | 4137 | 0.05 | trans | ||
RS17687571 | CHR17 | 43750009 | mapt | 4137 | 0.18 | trans | ||
rs17687667 | CHR17 | 43754098 | mapt | 4137 | 0.05 | trans | ||
RS17688002 | CHR17 | 43762593 | mapt | 4137 | 0.05 | trans | ||
rs17688391 | CHR17 | 43772108 | mapt | 4137 | 0.07 | trans | ||
RS17688434 | CHR17 | 43772539 | mapt | 4137 | 0.11 | trans | ||
rs12150610 | CHR17 | 43775478 | mapt | 4137 | 0.1 | trans | ||
rs12150547 | CHR17 | 43775545 | mapt | 4137 | 0.05 | trans | ||
rs17762165 | CHR17 | 43778601 | mapt | 4137 | 0.06 | trans | ||
RS17688922 | CHR17 | 43779350 | mapt | 4137 | 0.07 | trans | ||
RS17688944 | CHR17 | 43779418 | mapt | 4137 | 0.05 | trans | ||
rs1526128 | CHR17 | 43779623 | mapt | 4137 | 0.06 | trans | ||
rs1526129 | CHR17 | 43779656 | mapt | 4137 | 0.08 | trans | ||
RS17563501 | CHR17 | 43801694 | mapt | 4137 | 0.05 | trans | ||
RS2902662 | CHR17 | 43806924 | mapt | 4137 | 0.1 | trans | ||
RS17563787 | CHR17 | 43813251 | mapt | 4137 | 0.05 | trans | ||
rs17563827 | CHR17 | 43818221 | mapt | 4137 | 0.05 | trans | ||
RS17426106 | CHR17 | 43828934 | mapt | 4137 | 0.04 | trans | ||
RS17426195 | CHR17 | 43832366 | mapt | 4137 | 0.06 | trans | ||
rs4074462 | CHR17 | 43855227 | mapt | 4137 | 0.09 | trans | ||
rs17689471 | CHR17 | 43892972 | mapt | 4137 | 0.05 | trans | ||
rs17762769 | CHR17 | 43893402 | mapt | 4137 | 0.1 | trans | ||
rs8072451 | CHR17 | 43893715 | mapt | 4137 | 0.08 | trans | ||
rs4277389 | CHR17 | 43895652 | mapt | 4137 | 0.05 | trans | ||
rs17689824 | CHR17 | 43904396 | mapt | 4137 | 0.05 | trans | ||
RS17769552 | CHR17 | 43927289 | mapt | 4137 | 0.07 | trans | ||
SNP_A-2150382 | 0 | mapt | 4137 | 0.04 | trans | |||
RS916793 | CHR17 | 43954685 | mapt | 4137 | 0.05 | trans | ||
RS17649553 | CHR17 | 43994647 | mapt | 4137 | 0.09 | trans | ||
RS17649641 | CHR17 | 43997371 | mapt | 4137 | 0.17 | trans | ||
RS17564223 | CHR17 | 43997519 | mapt | 4137 | 0.09 | trans | ||
RS17649954 | CHR17 | 44001660 | mapt | 4137 | 0.04 | trans | ||
RS17564619 | CHR17 | 44002137 | mapt | 4137 | 0.07 | trans | ||
RS17650063 | CHR17 | 44002554 | mapt | 4137 | 0.05 | trans | ||
rs17564780 | CHR17 | 44005412 | mapt | 4137 | 0.05 | trans | ||
rs17650381 | CHR17 | 44013023 | mapt | 4137 | 0.11 | trans | ||
rs12150111 | CHR17 | 44013937 | mapt | 4137 | 0.05 | trans | ||
rs2316784 | CHR17 | 44021698 | mapt | 4137 | 0.06 | trans | ||
RS4327091 | CHR17 | 44021716 | mapt | 4137 | 0.05 | trans | ||
RS242559 | CHR17 | 44025887 | mapt | 4137 | 0.08 | trans | ||
RS17571718 | CHR17 | 44032767 | mapt | 4137 | 0.04 | trans | ||
RS17571739 | CHR17 | 44032914 | mapt | 4137 | 0.05 | trans | ||
RS17650872 | CHR17 | 44039515 | mapt | 4137 | 0.05 | trans | ||
rs17572169 | CHR17 | 44045973 | mapt | 4137 | 0.05 | trans | ||
rs17572361 | CHR17 | 44052008 | mapt | 4137 | 0.18 | trans | ||
RS17572851 | CHR17 | 44063765 | mapt | 4137 | 0.1 | trans | ||
RS17572893 | CHR17 | 44064207 | mapt | 4137 | 0.05 | trans | ||
RS17573175 | CHR17 | 44071088 | mapt | 4137 | 0.06 | trans | ||
RS1078268 | CHR17 | 44075900 | mapt | 4137 | 0.09 | trans | ||
rs8070723 | CHR17 | 44081063 | mapt | 4137 | 0.05 | trans | ||
RS17652449 | CHR17 | 44088936 | mapt | 4137 | 0.15 | trans | ||
RS17652502 | CHR17 | 44094470 | mapt | 4137 | 0.05 | trans | ||
RS17574228 | CHR17 | 44104508 | mapt | 4137 | 0.05 | trans | ||
rs1076222 | CHR17 | 44109768 | mapt | 4137 | 0.09 | trans | ||
rs7350980 | CHR17 | 44110270 | mapt | 4137 | 0.08 | trans | ||
RS4597358 | CHR17 | 44110669 | mapt | 4137 | 0.05 | trans | ||
RS17653162 | CHR17 | 44111826 | mapt | 4137 | 0.03 | trans | ||
RS17574824 | CHR17 | 44115106 | mapt | 4137 | 0.2 | trans | ||
RS12150090 | CHR17 | 44115885 | mapt | 4137 | 0.05 | trans | ||
snp_a-1855473 | 0 | mapt | 4137 | 0.05 | trans | |||
RS7221390 | CHR17 | 44116949 | mapt | 4137 | 0.05 | trans | ||
snp_a-1823652 | 0 | mapt | 4137 | 0.18 | trans | |||
RS17575556 | CHR17 | 44135826 | mapt | 4137 | 0.06 | trans | ||
RS17659881 | CHR17 | 44157596 | mapt | 4137 | 0.05 | trans | ||
RS17660132 | CHR17 | 44165802 | mapt | 4137 | 0.03 | trans | ||
RS17577094 | CHR17 | 44187491 | mapt | 4137 | 0.15 | trans | ||
RS17660907 | CHR17 | 44191084 | mapt | 4137 | 0.07 | trans | ||
rs8070942 | CHR17 | 44208673 | mapt | 4137 | 0.04 | trans | ||
rs2532316 | CHR17 | 44213711 | mapt | 4137 | 0.05 | trans | ||
RS2696600 | CHR17 | 44216225 | mapt | 4137 | 0.13 | trans | ||
RS1406068 | CHR17 | 44234525 | mapt | 4137 | 0.05 | trans | ||
rs2532292 | CHR17 | 44237067 | mapt | 4137 | 0.05 | trans | ||
rs2532286 | CHR17 | 44241663 | mapt | 4137 | 0.06 | trans | ||
rs2532276 | CHR17 | 44246623 | mapt | 4137 | 0.07 | trans | ||
rs2532275 | CHR17 | 44246996 | mapt | 4137 | 0.05 | trans | ||
RS2532259 | CHR17 | 44253363 | mapt | 4137 | 0.05 | trans | ||
rs2732646 | CHR17 | 44254378 | mapt | 4137 | 0.05 | trans | ||
rs2732589 | CHR17 | 44266021 | mapt | 4137 | 0.16 | trans | ||
RS1918788 | CHR17 | 44267616 | mapt | 4137 | 0.05 | trans | ||
RS2732675 | CHR17 | 44280187 | mapt | 4137 | 0.14 | trans | ||
RS2668695 | CHR17 | 44292125 | mapt | 4137 | 0.05 | trans | ||
RS2732706 | CHR17 | 44351685 | mapt | 4137 | 0.11 | trans | ||
RS2668622 | 0 | mapt | 4137 | 0.04 | trans |
第二节。转录组注释
一般基因表达(GTEX)
基因expression during devlopment (BrainCloud)
脚注:
总共绘制了269个时间点,n = 38个胎儿样品(x = 1:38)。每个三角形代表一个时间点。
基因expression of temporal and spatial changes (BrainSpan)
脚注:
SC:亚皮质区域;SM:感觉运动区域;FC:额叶皮层;和TP:颞顶皮层
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
前10个积极共表达的基因 | ||
基因 | 皮尔逊的相关性 | Spearman's Correlation |
TNS1 | 0.83 | 0.86 |
TLN1 | 0.80 | 0.81 |
RRBP1 | 0.79 | 0.83 |
SLC20A2 | 0.78 | 0.82 |
GSN | 0.77 | 0.78 |
ANGPTL2 | 0.77 | 0.79 |
TJP2 | 0.77 | 0.82 |
UNC5B | 0.77 | 0.80 |
mylk | 0.77 | 0.79 |
ERBB3 | 0.77 | 0.77 |
前10个负共表达基因 | ||
基因 | 皮尔逊的相关性 | Spearman's Correlation |
NR2C2AP | -0.53 | -0.56 |
RPL27 | -0.52 | -0.67 |
RPL31 | -0.52 | -0.66 |
polb | -0.52 | -0.58 |
RPS23 | -0.52 | -0.66 |
FRG1 | -0.52 | -0.61 |
RPL24 | -0.52 | -0.68 |
CYP2R1 | -0.52 | -0.57 |
RPS18 | -0.52 | -0.64 |
RPL32 | -0.51 | -0.64 |
第三节。基因本体论注释
分子功能 | 去学期 | 证据 | 神经关键字 | pubMed ID |
---|---|---|---|---|
GO:0005200 | 细胞骨架的结构成分 | TAS | 2498079 | |
去:0008034 | lipoprotein binding | IPI | 7972031 | |
GO:0017124 | SH3 domain binding | IPI | 9763511 | |
去:0008017 | microtubule binding | 艾达 | 1918161 | |
去:0008017 | microtubule binding | ISS | - | |
GO:0019899 | 酶结合 | IPI | 9736630|12888622 | |
GO:0034187 | 载脂蛋白E结合 | IPI | 7566652 | |
生物过程 | 去学期 | 证据 | 神经关键字 | pubMed ID |
GO:0048699 | 神经元的产生 | NAS | 神经元,神经发生(GO期限:7) | 8522593 |
GO:0045773 | 轴突延伸的正调节 | 艾达 | Axon(GO术语级别:15) | 1389180 |
GO:0045773 | 轴突延伸的正调节 | ISS | Axon(GO术语级别:15) | - |
去:0000226 | 微管细胞骨架组织 | 艾达 | 1057175 | |
去:0000226 | 微管细胞骨架组织 | ISS | - | |
去:0007026 | 微管解聚的负调节 | IEA | - | |
去:0031116 | 微管聚合的阳性调节 | 艾达 | 1421571 | |
去:0031116 | 微管聚合的阳性调节 | ISS | - | |
细胞分量 | 去学期 | 证据 | 神经关键字 | pubMed ID |
GO:0042995 | 细胞投影 | IEA | 轴突(GO term level: 4) | - |
GO:0030426 | growth cone | 艾达 | Axon,Dendrite(GO期限:5) | 8642405 |
GO:0030426 | growth cone | ISS | Axon,Dendrite(GO期限:5) | - |
GO:0030424 | 轴突 | 艾达 | 神经元,轴突,神经递质(GO期限:6) | 8642405 |
GO:0030424 | 轴突 | ISS | 神经元,轴突,神经递质(GO期限:6) | - |
去:0005829 | cytosol | TAS | 10747907 | |
GO:0005856 | 细胞骨架 | IEA | - | |
GO:0005875 | 微管相关的复合物 | TAS | 10747907 | |
去:0005737 | 细胞质 | IEA | - | |
GO:0005886 | 质膜 | 艾达 | 8522593 | |
GO:0005886 | 质膜 | ISS | - | |
GO:0045298 | 微管蛋白复合物 | 艾达 | 8642405 | |
GO:0045298 | 微管蛋白复合物 | ISS | - |
Section IV. Protein-protein interaction annotation
Interactors | Aliases B | Official full name B | 实验 | 资源 | pubMed ID |
---|---|---|---|---|---|
AATF | CHE-1 | CHE1 | DED | 凋亡拮抗转录因子 | - | HPRD,Biogrid | 14697667 |
apoe | AD2 | LPG | MGC1571 | apoprotein | apolipoprotein E | 重构的复合物 | Biogrid | 8620924 |
apoe | AD2 | LPG | MGC1571 | apoprotein | apolipoprotein E | - | HPRD | 7566652|9147408 |
平静1 | Calml2 |CAMI |DD132 |PHKD | calmodulin 1 (phosphorylase kinase, delta) | - | HPRD,Biogrid | 2123288 |
Fyn | MGC45350 |SLK |syn | Fynoncogene related to SRC, FGR, YES | - | HPRD,Biogrid | 11826099 |
GSK3B | - | 糖原合酶激酶3β | GSK3BETA磷酸化FTAU。这种相互作用是在兔GSK3Beta和人FTAU之间的相互作用上建模的。 | BIND | 14636947 |
标记4 | FLJ90097 |KIAA1860 |markl1 |NBLA00650 | MAP/microtubule affinity-regulating kinase 4 | - | HPRD,Biogrid | 14594945 |
OGT | FLJ23071 | HRNT1 | MGC22921 | O-GLCNAC | O连接的N-乙酰葡萄糖胺(GlcNAC)转移酶(UDP-N-乙酰葡萄糖:多肽-N-乙酰葡萄糖苷转移酶) | - | HPRD,Biogrid | 8910513|12911634 |
PIN1 | DOD | UBL5 | peptidylprolyl cis/trans isomerase, NIMA-interacting 1 | - | HPRD,Biogrid | 10391244 |
PSEN1 | ad3 |时尚|PS1 |S182 | presenilin 1 | - | HPRD,Biogrid | 9689133 |
S100B | NEF | S100 | S100beta | S100钙结合蛋白B | - | HPRD | 11264299 |
S100B | NEF | S100 | S100beta | S100钙结合蛋白B | - | HPRD,Biogrid | 2833519 |
SNCA | MGC110988 | NACP | PARK1 | PARK4 | PD1 | 突触核蛋白,α(淀粉样蛋白前体的非A4成分) | - | HPRD,Biogrid | 10464279 |
SPTB | HSPTB1 | spectrin, beta, erythrocytic | - | HPRD,Biogrid | 6743699 |
STXBP1 | EIEE4 |munc18-1 |UNC18 |Hunc18 |RBSEC1 | 语法素结合蛋白1 | - | HPRD,Biogrid | 12963086 |
TUBB2A | tubb |tubb2 |DJ40E16.7 | 微管蛋白,β2A | - | HPRD | 9922135 |
USP9Y | AZF |AZF1 |azfa |dffry |FLJ33043 |SP3 | 泛素特异性肽酶9,Y连锁(类似脂肪的果蝇) | - | HPRD,Biogrid | 1723470 |
YWHAA | - | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, alpha polypeptide | 亲和力捕获 - 韦斯特恩 | Biogrid | 12176984 |
YWHAB | GW128 |HS1 |KCIP-1 | 酪氨酸3-单加氧酶/色氨酸5-单加氧酶激活蛋白,β多肽 | - | HPRD,Biogrid | 10840038 |
YWHAZ | KCIP-1|MGC111427 | MGC126532 | MGC138156 | 酪氨酸3-单加氧酶/色氨酸5-单加氧酶激活蛋白,Zeta多肽 | Tau与14-3-3-Zeta相互作用。 | BIND | 12176984 |
YWHAZ | KCIP-1|MGC111427 | MGC126532 | MGC138156 | 酪氨酸3-单加氧酶/色氨酸5-单加氧酶激活蛋白,Zeta多肽 | - | HPRD,Biogrid | 10840038 |
Section V. Pathway annotation
Section VI. microRNA annotation
miRNA family | 目标位置 | mirna id | mirna seq | ||
---|---|---|---|---|---|
UTR开始 | UTR结束 | 匹配方法 | |||
mir-181 | 4068 | 4074 | m8 | HSA-MIR-181A脑 | aacauucaacgcugucggugagu |
HSA-MIR-181BSZ | aacauucauugcugucggggg | ||||
HSA-MIR-181C脑 | aacauucaaccugucggugagu | ||||
HSA-MIR-181D脑 | AACAUUCAUUGUUGUCGGUGGGUU | ||||
miR-214 | 2039 | 2045 | m8 | hsa-miR-214脑 | acagcaggcacagacaggcag |
miR-219 | 3175 | 3181 | m8 | hsa-miR-219脑 | UGAUUGUCCAAACGCAAUUCU |
mir-27 | 4065 | 4071 | 1A | hsa-miR-27a脑 | uucacaguggcuaaguuccgc |
hsa-miR-27b脑 | uucacaguggcuaaguucugc | ||||
mir-34/449 | 1187 | 1193 | m8 | HSA-MIR-34A脑 | uggcaguguuaguguguuuu |
HSA-MIR-34C | AGGCAGUGUAGUUAGCUGAUUGC | ||||
hsa-miR-449 | UGGCAGUGUAUUGUUAGCUGGU | ||||
HSA-MIR-449B | Aggcaguguauuguuagcuggc |