Summary
基因 4137
Symbol mapt
同义词 ddpac | ftdp-17 | maptl | mstd | mtbt1 | mtbt2 | ppnd | ppp1r103 | tau
描述 microtubule associated protein tau
参考 MIM:157140|HGNC:HGNC:6893|Ensembl:ENSG00000186868|HPRD:01142|Vega:Otthumg00000168833
基因type 蛋白质编码
地图位置 17q21.1
Sherlock p-value 0.004
胎儿β -2.487
主持人 小脑半球
Cerebellum
Cortex
Frontal Cortex BA9
Myers' cis & trans
支持 STRUCTURAL PLASTICITY
g2cdb.humanpsd
G2CDB.HUMANPSP
COMPOSITESET
potential synaptic genes

基因in Data Sources
基因set name 基因组方法 描述 信息
简历:PGCNP 全基因组协会研究 GWAS
CV:PheWAS 全球整个关联研究(PHEWAS) 157个与精神分裂症相关的SNP 1
PMID:cooccur 高通量文献搜索 Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included.
文学 高通量文献搜索 Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenic,schizophrenias 点击显示详细信息
go_annotation Mapping neuro-related keywords to Gene Ontology annotations Hits with neuro-related keywords: 8
网络 Shortest path distance of core genes in the Human protein-protein interaction network PPI网络中最短路径的贡献:3.6916

Section I. Genetics and epigenetics annotation

@CV:PheWAS

SNP ID Chromosome position 等位基因 p 功能 基因 Up/Down Distance
RS242557 17 0 null 1.576 mapt null

@EQTL注释

SNP ID Chromosome position 主持人 Gene Entrez ID PVALUE QVALUE TSS距离 EQTL类型
rs12947718 CHR17 43493100 mapt 4137 0 顺式
RS17631303 CHR17 43516401 mapt 4137 0 顺式
RS3946526 CHR17 43541655 mapt 4137 1.764E-4 顺式
RS2696425 CHR17 43666905 mapt 4137 8.37E-4 顺式
RS418891 CHR17 43693537 mapt 4137 0 顺式
rs413778 CHR17 43716884 mapt 4137 0 顺式
RS453997 CHR17 43727060 mapt 4137 5.899E-4 顺式
RS422112 CHR17 43728136 mapt 4137 0 顺式
RS241033 CHR17 43733982 mapt 4137 5.899E-4 顺式
RS241032 CHR17 43734144 mapt 4137 0 顺式
RS241031 CHR17 43734303 mapt 4137 5.899E-4 顺式
RS17760733 CHR17 43746275 mapt 4137 0.01 顺式
RS17687571 CHR17 43750009 mapt 4137 0 顺式
rs17687667 CHR17 43754098 mapt 4137 6.42E-4 顺式
RS17688002 CHR17 43762593 mapt 4137 5.899E-4 顺式
rs17688068 CHR17 43763934 mapt 4137 0.02 顺式
rs17688391 CHR17 43772108 mapt 4137 9.156E-4 顺式
RS17688434 CHR17 43772539 mapt 4137 0 顺式
rs12150610 CHR17 43775478 mapt 4137 0 顺式
rs12150547 CHR17 43775545 mapt 4137 5.899E-4 顺式
rs17762165 CHR17 43778601 mapt 4137 8.734e-4 顺式
RS17688922 CHR17 43779350 mapt 4137 0 顺式
RS17688944 CHR17 43779418 mapt 4137 5.878E-4 顺式
rs1526128 CHR17 43779623 mapt 4137 7.6e-4 顺式
rs1526129 CHR17 43779656 mapt 4137 0 顺式
rs1724425 CHR17 43781746 mapt 4137 0.01 顺式
RS17563501 CHR17 43801694 mapt 4137 7.043E-4 顺式
RS2902662 CHR17 43806924 mapt 4137 0 顺式
RS17563787 CHR17 43813251 mapt 4137 5.878E-4 顺式
rs17563827 CHR17 43818221 mapt 4137 7.176E-4 顺式
RS12150672 CHR17 43826636 mapt 4137 0.01 顺式
RS17426106 CHR17 43828934 mapt 4137 5.452E-4 顺式
RS17426195 CHR17 43832366 mapt 4137 7.513E-4 顺式
rs6503447 CHR17 43834911 mapt 4137 0.06 顺式
rs4074462 CHR17 43855227 mapt 4137 0 顺式
rs17689471 CHR17 43892972 mapt 4137 7.043E-4 顺式
rs17762769 CHR17 43893402 mapt 4137 0 顺式
RS171440 CHR17 43893486 mapt 4137 0.08 顺式
rs8072451 CHR17 43893715 mapt 4137 0 顺式
rs4277389 CHR17 43895652 mapt 4137 5.878E-4 顺式
rs17689824 CHR17 43904396 mapt 4137 6.987E-4 顺式
rs17763086 CHR17 43905480 mapt 4137 0.02 顺式
rs17689882 CHR17 43906827 mapt 4137 5.878E-4 顺式
RS17769552 CHR17 43927289 mapt 4137 9.779E-4 顺式
RS916793 CHR17 43954685 mapt 4137 7.043E-4 顺式
RS17649553 CHR17 43994647 mapt 4137 0 顺式
RS17649641 CHR17 43997371 mapt 4137 0 顺式
RS17564223 CHR17 43997519 mapt 4137 0 顺式
RS17649954 CHR17 44001660 mapt 4137 5.441E-4 顺式
RS17564619 CHR17 44002137 mapt 4137 9.354e-4 顺式
RS17650063 CHR17 44002554 mapt 4137 7.043E-4 顺式
rs17564780 CHR17 44005412 mapt 4137 7.043E-4 顺式
rs17650381 CHR17 44013023 mapt 4137 0 顺式
rs12150111 CHR17 44013937 mapt 4137 7.043E-4 顺式
rs2316784 CHR17 44021698 mapt 4137 8.505E-4 顺式
RS4327091 CHR17 44021716 mapt 4137 5.878E-4 顺式
RS242559 CHR17 44025887 mapt 4137 0 顺式
RS17571718 CHR17 44032767 mapt 4137 4.555e-4 顺式
RS17571739 CHR17 44032914 mapt 4137 5.878E-4 顺式
RS17650872 CHR17 44039515 mapt 4137 7.043E-4 顺式
rs17572169 CHR17 44045973 mapt 4137 5.878E-4 顺式
rs17651213 CHR17 44051923 mapt 4137 0.01 顺式
rs17572361 CHR17 44052008 mapt 4137 0 顺式
RS17572851 CHR17 44063765 mapt 4137 0 顺式
RS17572893 CHR17 44064207 mapt 4137 5.878E-4 顺式
RS17573175 CHR17 44071088 mapt 4137 8.2E-4 顺式
RS1078268 CHR17 44075900 mapt 4137 0 顺式
rs8070723 CHR17 44081063 mapt 4137 5.878E-4 顺式
RS17652449 CHR17 44088936 mapt 4137 0 顺式
RS17652502 CHR17 44094470 mapt 4137 7.043E-4 顺式
RS17574228 CHR17 44104508 mapt 4137 5.878E-4 顺式
rs1076222 CHR17 44109768 mapt 4137 0 顺式
rs7350980 CHR17 44110270 mapt 4137 0 顺式
RS4597358 CHR17 44110669 mapt 4137 5.878E-4 顺式
RS17653162 CHR17 44111826 mapt 4137 3.466E-4 顺式
RS17574824 CHR17 44115106 mapt 4137 0 顺式
RS12150090 CHR17 44115885 mapt 4137 7.043E-4 顺式
RS7221390 CHR17 44116949 mapt 4137 7.043E-4 顺式
RS17575556 CHR17 44135826 mapt 4137 8.802E-4 顺式
RS17659881 CHR17 44157596 mapt 4137 7.043E-4 顺式
RS17660132 CHR17 44165802 mapt 4137 3.611E-4 顺式
RS17577094 CHR17 44187491 mapt 4137 0 顺式
RS17660907 CHR17 44191084 mapt 4137 0 顺式
rs8070942 CHR17 44208673 mapt 4137 5.515E-4 顺式
rs2532316 CHR17 44213711 mapt 4137 5.878E-4 顺式
RS2696600 CHR17 44216225 mapt 4137 0 顺式
RS1406068 CHR17 44234525 mapt 4137 5.878E-4 顺式
rs2532292 CHR17 44237067 mapt 4137 7.043E-4 顺式
rs2532286 CHR17 44241663 mapt 4137 7.544E-4 顺式
rs2532276 CHR17 44246623 mapt 4137 0 顺式
rs2532275 CHR17 44246996 mapt 4137 7.043E-4 顺式
RS2532259 CHR17 44253363 mapt 4137 7.043E-4 顺式
rs2732646 CHR17 44254378 mapt 4137 5.878E-4 顺式
rs2732589 CHR17 44266021 mapt 4137 0 顺式
RS1918788 CHR17 44267616 mapt 4137 7.043E-4 顺式
rs2732596 CHR17 44269545 mapt 4137 0.01 顺式
RS2732675 CHR17 44280187 mapt 4137 0 顺式
RS2732674 CHR17 44280696 mapt 4137 0.01 顺式
RS2668695 CHR17 44292125 mapt 4137 6.7E-4 顺式
rs2532332 CHR17 44347726 mapt 4137 0.08 顺式
RS2732706 CHR17 44351685 mapt 4137 0 顺式
RS2668624 CHR17 44352871 mapt 4137 0.01 顺式
RS199436 CHR17 44789284 mapt 4137 0.17 顺式
RS142167 CHR17 44795233 mapt 4137 0.12 顺式
RS199452 CHR17 44801339 mapt 4137 0.13 顺式
RS199449 CHR17 44808901 mapt 4137 0.15 顺式
RS199535 CHR17 44822661 mapt 4137 0.04 顺式
rs199515 CHR17 44856640 mapt 4137 0.1 顺式
rs12947718 CHR17 43493100 mapt 4137 0.17 trans
RS17631303 CHR17 43516401 mapt 4137 0.1 trans
RS3946526 CHR17 43541655 mapt 4137 0.02 trans
RS2696425 CHR17 43666905 mapt 4137 0.06 trans
RS418891 CHR17 43693537 mapt 4137 0.17 trans
rs413778 CHR17 43716884 mapt 4137 0.13 trans
RS453997 CHR17 43727060 mapt 4137 0.05 trans
RS422112 CHR17 43728136 mapt 4137 0.13 trans
RS241033 CHR17 43733982 mapt 4137 0.05 trans
RS241031 CHR17 43734303 mapt 4137 0.05 trans
RS17687571 CHR17 43750009 mapt 4137 0.18 trans
rs17687667 CHR17 43754098 mapt 4137 0.05 trans
RS17688002 CHR17 43762593 mapt 4137 0.05 trans
rs17688391 CHR17 43772108 mapt 4137 0.07 trans
RS17688434 CHR17 43772539 mapt 4137 0.11 trans
rs12150610 CHR17 43775478 mapt 4137 0.1 trans
rs12150547 CHR17 43775545 mapt 4137 0.05 trans
rs17762165 CHR17 43778601 mapt 4137 0.06 trans
RS17688922 CHR17 43779350 mapt 4137 0.07 trans
RS17688944 CHR17 43779418 mapt 4137 0.05 trans
rs1526128 CHR17 43779623 mapt 4137 0.06 trans
rs1526129 CHR17 43779656 mapt 4137 0.08 trans
RS17563501 CHR17 43801694 mapt 4137 0.05 trans
RS2902662 CHR17 43806924 mapt 4137 0.1 trans
RS17563787 CHR17 43813251 mapt 4137 0.05 trans
rs17563827 CHR17 43818221 mapt 4137 0.05 trans
RS17426106 CHR17 43828934 mapt 4137 0.04 trans
RS17426195 CHR17 43832366 mapt 4137 0.06 trans
rs4074462 CHR17 43855227 mapt 4137 0.09 trans
rs17689471 CHR17 43892972 mapt 4137 0.05 trans
rs17762769 CHR17 43893402 mapt 4137 0.1 trans
rs8072451 CHR17 43893715 mapt 4137 0.08 trans
rs4277389 CHR17 43895652 mapt 4137 0.05 trans
rs17689824 CHR17 43904396 mapt 4137 0.05 trans
RS17769552 CHR17 43927289 mapt 4137 0.07 trans
SNP_A-2150382 0 mapt 4137 0.04 trans
RS916793 CHR17 43954685 mapt 4137 0.05 trans
RS17649553 CHR17 43994647 mapt 4137 0.09 trans
RS17649641 CHR17 43997371 mapt 4137 0.17 trans
RS17564223 CHR17 43997519 mapt 4137 0.09 trans
RS17649954 CHR17 44001660 mapt 4137 0.04 trans
RS17564619 CHR17 44002137 mapt 4137 0.07 trans
RS17650063 CHR17 44002554 mapt 4137 0.05 trans
rs17564780 CHR17 44005412 mapt 4137 0.05 trans
rs17650381 CHR17 44013023 mapt 4137 0.11 trans
rs12150111 CHR17 44013937 mapt 4137 0.05 trans
rs2316784 CHR17 44021698 mapt 4137 0.06 trans
RS4327091 CHR17 44021716 mapt 4137 0.05 trans
RS242559 CHR17 44025887 mapt 4137 0.08 trans
RS17571718 CHR17 44032767 mapt 4137 0.04 trans
RS17571739 CHR17 44032914 mapt 4137 0.05 trans
RS17650872 CHR17 44039515 mapt 4137 0.05 trans
rs17572169 CHR17 44045973 mapt 4137 0.05 trans
rs17572361 CHR17 44052008 mapt 4137 0.18 trans
RS17572851 CHR17 44063765 mapt 4137 0.1 trans
RS17572893 CHR17 44064207 mapt 4137 0.05 trans
RS17573175 CHR17 44071088 mapt 4137 0.06 trans
RS1078268 CHR17 44075900 mapt 4137 0.09 trans
rs8070723 CHR17 44081063 mapt 4137 0.05 trans
RS17652449 CHR17 44088936 mapt 4137 0.15 trans
RS17652502 CHR17 44094470 mapt 4137 0.05 trans
RS17574228 CHR17 44104508 mapt 4137 0.05 trans
rs1076222 CHR17 44109768 mapt 4137 0.09 trans
rs7350980 CHR17 44110270 mapt 4137 0.08 trans
RS4597358 CHR17 44110669 mapt 4137 0.05 trans
RS17653162 CHR17 44111826 mapt 4137 0.03 trans
RS17574824 CHR17 44115106 mapt 4137 0.2 trans
RS12150090 CHR17 44115885 mapt 4137 0.05 trans
snp_a-1855473 0 mapt 4137 0.05 trans
RS7221390 CHR17 44116949 mapt 4137 0.05 trans
snp_a-1823652 0 mapt 4137 0.18 trans
RS17575556 CHR17 44135826 mapt 4137 0.06 trans
RS17659881 CHR17 44157596 mapt 4137 0.05 trans
RS17660132 CHR17 44165802 mapt 4137 0.03 trans
RS17577094 CHR17 44187491 mapt 4137 0.15 trans
RS17660907 CHR17 44191084 mapt 4137 0.07 trans
rs8070942 CHR17 44208673 mapt 4137 0.04 trans
rs2532316 CHR17 44213711 mapt 4137 0.05 trans
RS2696600 CHR17 44216225 mapt 4137 0.13 trans
RS1406068 CHR17 44234525 mapt 4137 0.05 trans
rs2532292 CHR17 44237067 mapt 4137 0.05 trans
rs2532286 CHR17 44241663 mapt 4137 0.06 trans
rs2532276 CHR17 44246623 mapt 4137 0.07 trans
rs2532275 CHR17 44246996 mapt 4137 0.05 trans
RS2532259 CHR17 44253363 mapt 4137 0.05 trans
rs2732646 CHR17 44254378 mapt 4137 0.05 trans
rs2732589 CHR17 44266021 mapt 4137 0.16 trans
RS1918788 CHR17 44267616 mapt 4137 0.05 trans
RS2732675 CHR17 44280187 mapt 4137 0.14 trans
RS2668695 CHR17 44292125 mapt 4137 0.05 trans
RS2732706 CHR17 44351685 mapt 4137 0.11 trans
RS2668622 0 mapt 4137 0.04 trans

第二节。转录组注释

一般基因表达(GTEX)

无法使用

基因expression during devlopment (BrainCloud)

脚注:
总共绘制了269个时间点,n = 38个胎儿样品(x = 1:38)。每个三角形代表一个时间点。

基因expression of temporal and spatial changes (BrainSpan)

脚注:
SC:亚皮质区域;SM:感觉运动区域;FC:额叶皮层;和TP:颞顶皮层
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

前10个积极共表达的基因
基因 皮尔逊的相关性 Spearman's Correlation
TNS1 0.83 0.86
TLN1 0.80 0.81
RRBP1 0.79 0.83
SLC20A2 0.78 0.82
GSN 0.77 0.78
ANGPTL2 0.77 0.79
TJP2 0.77 0.82
UNC5B 0.77 0.80
mylk 0.77 0.79
ERBB3 0.77 0.77
前10个负共表达基因
基因 皮尔逊的相关性 Spearman's Correlation
NR2C2AP -0.53 -0.56
RPL27 -0.52 -0.67
RPL31 -0.52 -0.66
polb -0.52 -0.58
RPS23 -0.52 -0.66
FRG1 -0.52 -0.61
RPL24 -0.52 -0.68
CYP2R1 -0.52 -0.57
RPS18 -0.52 -0.64
RPL32 -0.51 -0.64

第三节。基因本体论注释

分子功能 去学期 证据 神经关键字 pubMed ID
GO:0005200 细胞骨架的结构成分 TAS 2498079
去:0008034 lipoprotein binding IPI 7972031
GO:0017124 SH3 domain binding IPI 9763511
去:0008017 microtubule binding 艾达 1918161
去:0008017 microtubule binding ISS -
GO:0019899 酶结合 IPI 9736630|12888622
GO:0034187 载脂蛋白E结合 IPI 7566652
生物过程 去学期 证据 神经关键字 pubMed ID
GO:0048699 神经元的产生 NAS 神经元,神经发生(GO期限:7) 8522593
GO:0045773 轴突延伸的正调节 艾达 Axon(GO术语级别:15) 1389180
GO:0045773 轴突延伸的正调节 ISS Axon(GO术语级别:15) -
去:0000226 微管细胞骨架组织 艾达 1057175
去:0000226 微管细胞骨架组织 ISS -
去:0007026 微管解聚的负调节 IEA -
去:0031116 微管聚合的阳性调节 艾达 1421571
去:0031116 微管聚合的阳性调节 ISS -
细胞分量 去学期 证据 神经关键字 pubMed ID
GO:0042995 细胞投影 IEA 轴突(GO term level: 4) -
GO:0030426 growth cone 艾达 Axon,Dendrite(GO期限:5) 8642405
GO:0030426 growth cone ISS Axon,Dendrite(GO期限:5) -
GO:0030424 轴突 艾达 神经元,轴突,神经递质(GO期限:6) 8642405
GO:0030424 轴突 ISS 神经元,轴突,神经递质(GO期限:6) -
去:0005829 cytosol TAS 10747907
GO:0005856 细胞骨架 IEA -
GO:0005875 微管相关的复合物 TAS 10747907
去:0005737 细胞质 IEA -
GO:0005886 质膜 艾达 8522593
GO:0005886 质膜 ISS -
GO:0045298 微管蛋白复合物 艾达 8642405
GO:0045298 微管蛋白复合物 ISS -

Section IV. Protein-protein interaction annotation

Interactors Aliases B Official full name B 实验 资源 pubMed ID
AATF CHE-1 | CHE1 | DED 凋亡拮抗转录因子 - HPRD,Biogrid 14697667
apoe AD2 | LPG | MGC1571 | apoprotein apolipoprotein E 重构的复合物 Biogrid 8620924
apoe AD2 | LPG | MGC1571 | apoprotein apolipoprotein E - HPRD 7566652|9147408
平静1 Calml2 |CAMI |DD132 |PHKD calmodulin 1 (phosphorylase kinase, delta) - HPRD,Biogrid 2123288
Fyn MGC45350 |SLK |syn Fynoncogene related to SRC, FGR, YES - HPRD,Biogrid 11826099
GSK3B - 糖原合酶激酶3β GSK3BETA磷酸化FTAU。这种相互作用是在兔GSK3Beta和人FTAU之间的相互作用上建模的。 BIND 14636947
标记4 FLJ90097 |KIAA1860 |markl1 |NBLA00650 MAP/microtubule affinity-regulating kinase 4 - HPRD,Biogrid 14594945
OGT FLJ23071 | HRNT1 | MGC22921 | O-GLCNAC O连接的N-乙酰葡萄糖胺(GlcNAC)转移酶(UDP-N-乙酰葡萄糖:多肽-N-乙酰葡萄糖苷转移酶) - HPRD,Biogrid 8910513|12911634
PIN1 DOD | UBL5 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 - HPRD,Biogrid 10391244
PSEN1 ad3 |时尚|PS1 |S182 presenilin 1 - HPRD,Biogrid 9689133
S100B NEF | S100 | S100beta S100钙结合蛋白B - HPRD 11264299
S100B NEF | S100 | S100beta S100钙结合蛋白B - HPRD,Biogrid 2833519
SNCA MGC110988 | NACP | PARK1 | PARK4 | PD1 突触核蛋白,α(淀粉样蛋白前体的非A4成分) - HPRD,Biogrid 10464279
SPTB HSPTB1 spectrin, beta, erythrocytic - HPRD,Biogrid 6743699
STXBP1 EIEE4 |munc18-1 |UNC18 |Hunc18 |RBSEC1 语法素结合蛋白1 - HPRD,Biogrid 12963086
TUBB2A tubb |tubb2 |DJ40E16.7 微管蛋白,β2A - HPRD 9922135
USP9Y AZF |AZF1 |azfa |dffry |FLJ33043 |SP3 泛素特异性肽酶9,Y连锁(类似脂肪的果蝇) - HPRD,Biogrid 1723470
YWHAA - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, alpha polypeptide 亲和力捕获 - 韦斯特恩 Biogrid 12176984
YWHAB GW128 |HS1 |KCIP-1 酪氨酸3-单加氧酶/色氨酸5-单加氧酶激活蛋白,β多肽 - HPRD,Biogrid 10840038
YWHAZ KCIP-1|MGC111427 | MGC126532 | MGC138156 酪氨酸3-单加氧酶/色氨酸5-单加氧酶激活蛋白,Zeta多肽 Tau与14-3-3-Zeta相互作用。 BIND 12176984
YWHAZ KCIP-1|MGC111427 | MGC126532 | MGC138156 酪氨酸3-单加氧酶/色氨酸5-单加氧酶激活蛋白,Zeta多肽 - HPRD,Biogrid 10840038


Section V. Pathway annotation

pathway name 路径大小 #szgr 2.0基因 信息
kegg mapk信号通路 267 205 All SZGR 2.0 genes in this pathway
Kegg阿尔茨海默氏病 169 110 All SZGR 2.0 genes in this pathway
生物卡丁生物肽途径 45 35 All SZGR 2.0 genes in this pathway
Biocarta P35alzheimers途径 11 9 All SZGR 2.0 genes in this pathway
pID LYSOPHOSPHOLIPID PATHWAY 66 53 All SZGR 2.0 genes in this pathway
pid reelin途径 29 29 All SZGR 2.0 genes in this pathway
PID LKB1途径 47 37 All SZGR 2.0 genes in this pathway
pID P38 GAMMA DELTA PATHWAY 11 9 All SZGR 2.0 genes in this pathway
反应组凋亡的细胞蛋白裂解 40 26 All SZGR 2.0 genes in this pathway
Reactome caspase介导的细胞骨架蛋白的切割 13 11 All SZGR 2.0 genes in this pathway
反应组凋亡 148 94 All SZGR 2.0 genes in this pathway
REACTOME APOPTOTIC EXECUTION PHASE 54 37 All SZGR 2.0 genes in this pathway
Liu Sox4靶向DN 309 191 All SZGR 2.0 genes in this pathway
THUM收缩心力衰竭DN 244 147 All SZGR 2.0 genes in this pathway
CHARAFE BREAST CANCER LUMINAL VS BASAL UP 380 215 All SZGR 2.0 genes in this pathway
Doane对雄激素的反应 184 125 All SZGR 2.0 genes in this pathway
Doane乳腺癌ESR1 UP 112 72 All SZGR 2.0 genes in this pathway
GINESTIER BREAST CANCER 20Q13 AMPLIFICATION UP 119 66 All SZGR 2.0 genes in this pathway
GRAESSMANN APOPTOSIS BY DOXORUBICIN DN 1781 1082 All SZGR 2.0 genes in this pathway
GAUSSMANN MLL AF4 FUSION TARGETS G UP 238 135 All SZGR 2.0 genes in this pathway
FARMER BREAST CANCER APOCRINE VS BASAL 330 217 All SZGR 2.0 genes in this pathway
农民乳腺癌基础与仙女 330 215 All SZGR 2.0 genes in this pathway
SCHLOSSER SERUM RESPONSE UP 134 93 All SZGR 2.0 genes in this pathway
Teramoto OPN目标集群8 8 7 All SZGR 2.0 genes in this pathway
YANG乳腺癌ESR1 UP 36 22 All SZGR 2.0 genes in this pathway
Pujana ATM PCC网络 1442 892 All SZGR 2.0 genes in this pathway
Benporath Suz12目标 1038 678 All SZGR 2.0 genes in this pathway
BENPORATH EED TARGETS 1062 725 All SZGR 2.0 genes in this pathway
与H3K27me3的Benporath ES 1118 744 All SZGR 2.0 genes in this pathway
BENPORATH PRC2 TARGETS 652 441 All SZGR 2.0 genes in this pathway
阿斯顿主要抑郁症DN 160 110 All SZGR 2.0 genes in this pathway
FRASOR RESPONSE TO ESTRADIOL UP 37 28 All SZGR 2.0 genes in this pathway
EWSR1 FLI1融合的Zhang目标 88 68 All SZGR 2.0 genes in this pathway
Browne HCMV感染20小时 240 152 All SZGR 2.0 genes in this pathway
lu衰老的脑dn 153 120 All SZGR 2.0 genes in this pathway
伊万诺娃造血干细胞长期 302 191 All SZGR 2.0 genes in this pathway
CUI TCF21目标2 DN 830 547 All SZGR 2.0 genes in this pathway
CUI TCF21 TARGETS DN 31 23 All SZGR 2.0 genes in this pathway
kayo卡路里限制肌肉 95 64 All SZGR 2.0 genes in this pathway
MCDOWELL ACUTE LUNG INJURY DN 48 33 All SZGR 2.0 genes in this pathway
Creighton内分泌疗法抗性1 528 324 All SZGR 2.0 genes in this pathway
Creighton内分泌疗法抗性4 307 185 All SZGR 2.0 genes in this pathway
H3K27me3 97 72 All SZGR 2.0 genes in this pathway
Heller HDAC靶向被甲基化的沉默 461 298 All SZGR 2.0 genes in this pathway
Lee转移和替代剪接DN 45 31 All SZGR 2.0 genes in this pathway
Massarweh他莫昔芬抵抗DN 258 160 All SZGR 2.0 genes in this pathway
Massarweh对雌二醇的反应 61 47 All SZGR 2.0 genes in this pathway
OUILLETTE CLL 13Q14删除DN 60 38 All SZGR 2.0 genes in this pathway
RIGGI EWING SARCOMA PROGENITOR UP 430 288 All SZGR 2.0 genes in this pathway
脑DN中的乳腺癌复发 85 58 All SZGR 2.0 genes in this pathway
SMID乳腺癌腔内B 172 109 All SZGR 2.0 genes in this pathway
Smid乳腺癌基础DN 701 446 All SZGR 2.0 genes in this pathway
Mir34b和Mir34C的丰田目标 463 262 All SZGR 2.0 genes in this pathway
Zheng胶质母细胞瘤可塑性DN 58 39 All SZGR 2.0 genes in this pathway
HUANG DASATINIB RESISTANCE DN 69 44 All SZGR 2.0 genes in this pathway
Yoshimura mapk8靶向 1305 895 All SZGR 2.0 genes in this pathway
SWEET LUNG CANCER KRAS DN 435 289 All SZGR 2.0 genes in this pathway
霍夫曼(Hoffmann 36 24 All SZGR 2.0 genes in this pathway
肌肉中的罗马胰岛素靶标 442 263 All SZGR 2.0 genes in this pathway
Poola侵入性乳腺癌DN 134 83 All SZGR 2.0 genes in this pathway
金双相情感障碍少突胶质细胞密度相关 682 440 All SZGR 2.0 genes in this pathway
Kim所有疾病Calb1 Corr Up 548 370 All SZGR 2.0 genes in this pathway
verhaak胶质母细胞瘤pro 177 132 All SZGR 2.0 genes in this pathway
DUTERTRE ESTRADIOL RESPONSE 6HR UP 229 149 All SZGR 2.0 genes in this pathway
BHAT ESR1通过AKT1 UP目标 281 183 All SZGR 2.0 genes in this pathway
FARDIN HYPOXIA 11 32 29 All SZGR 2.0 genes in this pathway
TORCHIA TARGETS OF EWSR1 FLI1 FUSION UP 271 165 All SZGR 2.0 genes in this pathway
GOBERT OLIGODENDROCYTE DIFFERENTIATION DN 1080 713 All SZGR 2.0 genes in this pathway
由SALL4同工型绑定的RAO A 182 108 All SZGR 2.0 genes in this pathway
ghandhi旁观者辐射DN 12 10 All SZGR 2.0 genes in this pathway
Zwang仅通过第二EGF脉冲瞬时向上 1725年 838 All SZGR 2.0 genes in this pathway

Section VI. microRNA annotation

miRNA family 目标位置 mirna id mirna seq
UTR开始 UTR结束 匹配方法
mir-181 4068 4074 m8 HSA-MIR-181A aacauucaacgcugucggugagu
HSA-MIR-181BSZ aacauucauugcugucggggg
HSA-MIR-181C aacauucaaccugucggugagu
HSA-MIR-181D AACAUUCAUUGUUGUCGGUGGGUU
miR-214 2039 2045 m8 hsa-miR-214 acagcaggcacagacaggcag
miR-219 3175 3181 m8 hsa-miR-219 UGAUUGUCCAAACGCAAUUCU
mir-27 4065 4071 1A hsa-miR-27a uucacaguggcuaaguuccgc
hsa-miR-27b uucacaguggcuaaguucugc
mir-34/449 1187 1193 m8 HSA-MIR-34A uggcaguguuaguguguuuu
HSA-MIR-34C AGGCAGUGUAGUUAGCUGAUUGC
hsa-miR-449 UGGCAGUGUAUUGUUAGCUGGU
HSA-MIR-449B Aggcaguguauuguuagcuggc