Search results: The pahtwayp1111has 478 genes in the original annotation. Currently, there are 302 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
5305 PIP4K2A PI5P4KA | PIP5K2A | PIP5KII-alpha | PIP5KIIA | PIPK phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 10p12.2 Association
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8029 CUBN IFCR | MGA1 | gp280 cubilin 10p12.31 CV:PGCnp
DMG:Wockner_2014
5264 PHYH LN1 | LNAP1 | PAHX | PHYH1 | RD phytanoyl-CoA 2-hydroxylase 10p13 CV:PGCnp
GO_Annotation
PMID:cooccur
3422 IDI1 IPP1 | IPPI1 isopentenyl-diphosphate delta isomerase 1 10p15.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
1103 CHAT CHOACTASE | CMS1A | CMS1A2 | CMS6 choline O-acetyltransferase 10q11.2 Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
259230 SGMS1 MOB | MOB1 | SMS1 | TMEM23 | hmob33 sphingomyelin synthase 1 10q11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5660 PSAP GLBA | SAP1 prosaposin 10q21-q22 Association
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5728 PTEN 10q23del | BZS | CWS1 | DEC | GLM2 | MHAM | MMAC1 | PTEN1 | TEP1 phosphatase and tensin homolog 10q23.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
27063 ANKRD1 ALRP | C-193 | CARP | CVARP | MCARP | bA320F15.2 ankyrin repeat domain 1 10q23.31 CV:PGCnp
PMID:cooccur
1586 CYP17A1 CPT7 | CYP17 | P450C17 | S17AH cytochrome P450 family 17 subfamily A member 1 10q24.3 CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
LK:YES
83401 ELOVL3 CIG-30 | CIG30 ELOVL fatty acid elongase 3 10q24.32 CV:PGCnp
51703 ACSL5 ACS2 | ACS5 | FACL5 acyl-CoA synthetase long-chain family member 5 10q25.2 CV:PGCnp
DNM:Fromer_2014
CompositeSet
1892 ECHS1 ECHS1D | SCEH enoyl-CoA hydratase, short chain, 1, mitochondrial 10q26.2-q26.3 CV:PGCnp
GSMA_IIA
Network
406 ARNTL BMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5 aryl hydrocarbon receptor nuclear translocator like 11p15 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
7003 TEAD1 AA | NTEF-1 | REF1 | TCF-13 | TCF13 | TEAD-1 | TEF-1 TEA domain transcription factor 1 11p15.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
120227 CYP2R1 - cytochrome P450 family 2 subfamily R member 1 11p15.2 CV:PGCnp
PMID:cooccur
6609 SMPD1 ASM | ASMASE | NPD sphingomyelin phosphodiesterase 1 11p15.4-p15.1 ADT:Sun_2012
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
81490 PTDSS2 PSS2 phosphatidylserine synthase 2 11p15.5 CV:PGCnp
DMG:Jaffe_2016
5286 PIK3C2A CPK | PI3-K-C2(ALPHA) | PI3-K-C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha 11p15.5-p14 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
219541 MED19 DT2P1G7 | LCMR1 | MED19AS mediator complex subunit 19 11q12.1 CV:PGCnp
DMG:Nishioka_2013
Network
9415 FADS2 D6D | DES6 | FADSD6 | LLCDL2 | SLL0262 | TU13 脂肪交流id desaturase 2 11q12.2 CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3992 FADS1 D5D | FADS6 | FADSD5 | LLCDL1 | TU12 脂肪交流id desaturase 1 11q12.2-q13.1 DEG:Sanders_2013
PMID:cooccur
5499 PPP1CA PP-1A | PP1A | PP1alpha | PPP1A protein phosphatase 1 catalytic subunit alpha 11q13 DMG:Montano_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Chromatin Remodeling Genes
10413 YAP1 COB1 | YAP | YAP2 | YAP65 | YKI Yes associated protein 1 11q13 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
Network
7108 TM7SF2 ANG1 | DHCR14A | NET47 transmembrane 7 superfamily member 2 11q13 DMG:Wockner_2014 G2Cdb.humanPSD
G2Cdb.humanPSP
1374 CPT1A CPT1 | CPT1-L | L-CPT1 carnitine palmitoyltransferase 1A 11q13.2 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Expression
PMID:cooccur
1717 DHCR7 SLOS 7-dehydrocholesterol reductase 11q13.4 CV:PGCnp
PMID:cooccur
8898 MTMR2 CMT4B | CMT4B1 myotubularin related protein 2 11q22 CV:PGCnp
116519 APOA5 APOAV | RAP3 apolipoprotein A-V 11q23 CV:PGCnp
GSMA_I
PMID:cooccur
335 APOA1 apo(a) apolipoprotein A-I 11q23-q24 GSMA_I
Network
PMID:cooccur
345 APOC3 APOCIII | HALP2 apolipoprotein C-III 11q23.3 GSMA_I
PMID:cooccur
55711 FAR2 HEL-S-81 | MLSTD1 | SDR10E2 脂肪交流yl-CoA reductase 2 12p11.22 CV:PGCnp
5288 PIK3C2G PI3K-C2-gamma | PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma 12p12 Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
79887 PLBD1 - phospholipase B domain containing 1 12p13.1 CV:PGCnp
2 A2M A2MD | CPAMD5 | FWP007 | S863-7 alpha-2-macroglobulin 12p13.31 CV:PGCnp
DMG:Wockner_2014
Network
377 ARF3 - ADP ribosylation factor 3 12q13 DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2819 GPD1 GPD-C | GPDH-C | HTGTI glycerol-3-phosphate dehydrogenase 1 12q13.12 CV:PGCnp CELL METABOLISM
91012 CERS5 LASS5 | Trh4 ceramide synthase 5 12q13.12 CV:PGCnp
1594 CYP27B1 CP2B | CYP1 | CYP1alpha | CYP27B | P450c1 | PDDR | VDD1 | VDDR | VDDRI | VDR cytochrome P450 family 27 subfamily B member 1 12q14.1 DMG:Wockner_2014
PMID:cooccur
4801 NFYB CBF-A | CBF-B | HAP3 | NF-YB nuclear transcription factor Y subunit beta 12q23.3 CV:PGCnp
DMG:Jaffe_2016
7296 TXNRD1 GRIM-12 | TR | TR1 | TRXR1 | TXNR thioredoxin reductase 1 12q23.3 CV:PGCnp
4598 MVK LRBP | MK | MVLK | POROK3 mevalonate kinase 12q24 CV:PGCnp
9612 NCOR2 CTG26 | N-CoR2 | SMAP270 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC | TRAC-1 | TRAC1 nuclear receptor corepressor 2 12q24 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
CompositeSet
Darnell FMRP targets
5501 PPP1CC PP-1G | PP1C | PPP1G protein phosphatase 1 catalytic subunit gamma 12q24.1-q24.2 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
Potential synaptic genes
32 ACACB ACC2 | ACCB | HACC275 acetyl-CoA carboxylase beta 12q24.11 CV:PGCnp
DMG:Wockner_2014
23389 MED13L MRFACD | PROSIT240 | THRAP2 | TRAP240L mediator complex subunit 13 like 12q24.21 CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
949 SCARB1 CD36L1 | CLA-1 | CLA1 | HDLQTL6 | SR-BI | SRB1 scavenger receptor class B member 1 12q24.31 CV:PGCnp
DMG:Wockner_2014
35 ACADS ACAD3 | SCAD acyl-CoA dehydrogenase, C-2 to C-3 short chain 12q24.31 CV:PGCnp
5319 PLA2G1B PLA2 | PLA2A | PPLA2 phospholipase A2 group IB 12q24.31 CV:PGCnp
GO_Annotation
PMID:cooccur
9107 MTMR6 - myotubularin related protein 6 13q12 CV:PGCnp
DMG:Jaffe_2016
29079 MED4 ARC36 | DRIP36 | HSPC126 | TRAP36 | VDRIP mediator complex subunit 4 13q14.2 CV:PGCnp
DMG:Jaffe_2016
5095 PCCA - propionyl-CoA carboxylase alpha subunit 13q32 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
5587 PRKD1 PKC-MU | PKCM | PKD | PRKCM protein kinase D1 14q11 CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_I
81537 SGPP1 SPPase1 sphingosine-1-phosphate phosphatase 1 14q23.2 CV:PGCnp
PMID:cooccur
9517 SPTLC2 HSN1C | LCB2 | LCB2A | NSAN1C | SPT2 | hLCB2a serine palmitoyltransferase long chain base subunit 2 14q24.3 CV:PGCnp
Expression
PMID:cooccur
Ascano FMRP targets
2581 GALC - galactosylceramidase 14q31 CV:PGCnp
PMID:cooccur
5641 LGMN AEP | LGMN1 | PRSC1 legumain 14q32.1 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
10858 CYP46A1 CP46 | CYP46 cytochrome P450 family 46 subfamily A member 1 14q32.1 CV:PGCnp
GO_Annotation
PMID:cooccur
123099 DEGS2 C14orf66 | DES2 | FADS8 delta(4)-desaturase, sphingolipid 2 14q32.2 CV:PGCnp
PMID:cooccur
81693 AMN PRO1028 | amnionless amnion associated transmembrane protein 14q32.3 CV:PGCnp
PMID:cooccur
254531 LPCAT4 AGPAT7 | AYTL3 | LPAAT-eta |简述AT2 lysophosphatidylcholine acyltransferase 4 15q14 CV:PGCnp
DMG:vanEijk_2014
283748 PLA2G4D cPLA2delta phospholipase A2 group IVD 15q15.1 CV:PGCnp
PMID:cooccur
255189 PLA2G4F PLA2G4FZ phospholipase A2 group IVF 15q15.1 CV:PGCnp
1588 CYP19A1 ARO | ARO1 | CPV1 | CYAR | CYP19 | CYPXIX | P-450AROM cytochrome P450 family 19 subfamily A member 1 15q21.1 CV:PGCnp
CV:PheWAS
3990 LIPC HDLCQ12 | HL | HTGL | LIPH lipase C, hepatic type 15q21.3 CV:PGCnp
PMID:cooccur
6095 RORA NR1F1 | ROR1 | ROR2 | ROR3 | RZR-ALPHA | RZRA RAR related orphan receptor A 15q22.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
3073 HEXA TSD hexosaminidase subunit alpha 15q24.1 CV:PGCnp
GO_Annotation
PMID:cooccur
1543 CYP1A1 AHH | AHRR | CP11 | CYP1 | CYPIA1 | P1-450 | P450-C | P450DX cytochrome P450 family 1 subfamily A member 1 15q24.1 CV:PGCnp
CV:PheWAS
PMID:cooccur
80765 STARD5 - StAR related lipid transfer domain containing 5 15q26 CV:PGCnp
DMG:Nishioka_2013
5346 PLIN1 FPLD4 | PERI | PLIN perilipin 1 15q26 CV:PGCnp
PMID:cooccur
204219 CERS3 ARCI9 | LASS3 ceramide synthase 3 15q26.3 CV:PGCnp
Expression
PMID:cooccur
10423 CDIPT PIS | PIS1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase 16p11.2 CNV:YES
CV:PGCnp
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
1387 CREBBP CBP | KAT3A | RSTS CREB binding protein 16p13.3 CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
1071 CETP BPIFF | HDLCQ10 cholesteryl ester transfer protein, plasma 16q21 CV:GWAScat
CV:GWASdb
CV:PGCnp
55697 VAC14 ArPIKfyve | TAX1BP2 | TRX Vac14 homolog (S. cerevisiae) 16q22.1 CV:PGCnp
DMG:Jaffe_2016
3931 LCAT - lecithin-cholesterol acyltransferase 16q22.1 CV:PGCnp
55512 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 16q22.1 CV:PGCnp INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
4597 MVD FP17780 | MDDase | MPD | POROK7 mevalonate diphosphate decarboxylase 16q24.3 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6720 SREBF1 SREBP-1c | SREBP1 | SREBP1a | bHLHd1 sterol regulatory element binding transcription factor 1 17p11.2 CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
10400 PEMT PEAMT | PEMPT | PEMT2 | PNMT phosphatidylethanolamine N-methyltransferase 17p11.2 Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55090 MED9 MED25 mediator complex subunit 9 17p11.2 CV:PGCnp
37 ACADVL ACAD6 | LCACD | VLCAD acyl-CoA dehydrogenase, very long chain 17p13.1 CV:PGCnp
DEG:Sanders_2013
DMG:vanEijk_2014
51003 MED31 3110004H13Rik | CGI-125 | Soh1 mediator complex subunit 31 17p13.1 CV:PGCnp
DMG:Jaffe_2016
146850 PIK3R6 C17orf38 | HsT41028 | p84 PIKAP | p87(PIKAP) | p87PIKAP phosphoinositide-3-kinase regulatory subunit 6 17p13.1 CV:PGCnp
DMG:Wockner_2014
23533 PIK3R5 F730038I15Rik | FOAP-2 | P101-PI3K | p101 phosphoinositide-3-kinase regulatory subunit 5 17p13.1 CV:GWASdb
CV:PGCnp
5338 PLD2 - phospholipase D2 17p13.1 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
51763 INPP5K PPS | SKIP inositol polyphosphate-5-phosphatase K 17p13.3 CV:PGCnp
GO_Annotation
9572 NR1D1 EAR1 | THRA1 | THRAL | ear-1 | hRev nuclear receptor subfamily 1 group D member 1 17q11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
5469 MED1 CRSP1 | CRSP200 | DRIP205 | DRIP230 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2 mediator complex subunit 1 17q12 CV:PGCnp
8396 PIP4K2B PI5P4KB | PIP5K2B | PIP5KIIB | PIP5KIIbeta | PIP5P4KB phosphatidylinositol-5-phosphate 4-kinase, type II, beta 17q12 CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
31 ACACA ACAC | ACACAD | ACC | ACC1 | ACCA acetyl-CoA carboxylase alpha 17q21 CNV:YES
CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
9862 MED24 ARC100 | CRSP100 | CRSP4 | DRIP100 | MED5 | THRAP4 | TRAP100 mediator complex subunit 24 17 q21.1 CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
9110 MTMR4 FYVE-DSP2 | ZFYVE11 myotubularin related protein 4 17q22 CV:PGCnp CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8714 ABCC3 ABC31 | EST90757 | MLP2 | MOAT-D | MRP3 | cMOAT2 ATP binding cassette subfamily C member 3 17q22 CV:PGCnp
DNM:McCarthy_2014
22901 ARSG - arylsulfatase G 17q24.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
5034 P4HB CLCRP1 | DSI | ERBA2L | GIT | P4Hbeta | PDI | PDIA1 | PHDB | PO4DB | PO4HB | PROHB prolyl 4-hydroxylase subunit beta 17q25 CV:PGCnp
DMG:Nishioka_2013
Network
RNA AND PROTEIN SYNTHESIS
2194 FASN FAS | OA-519 | SDR27X1 脂肪交流id synthase 17q25 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8877 SPHK1 SPHK sphingosine kinase 1 17q25.2 CV:PGCnp
339221 ENPP7 ALK-SMase | E-NPP 7 | NPP-7 | NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 17q25.3 CV:PGCnp
DMG:Wockner_2014
9663 LPIN2 - lipin 2 18p11.31 CV:PGCnp
CV:PheWAS
CompositeSet
Darnell FMRP targets
5289 PIK3C3 VPS34 | Vps34 | hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 18q12.3 Association
CV:PGCnp
GR_WM
PMID:cooccur
2531 KDSR DHSR | FVT1 | SDR35C1 3-ketodihydrosphingosine reductase 18q21.3 CV:PGCnp
57153 SLC44A2 CTL2 | PP1292 solute carrier family 44 member 2 19p13.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
9441 MED26 CRSP7 | CRSP70 mediator complex subunit 26 19p13.11 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
376497 SLC27A1 ACSVL5 | FATP | FATP-1 | FATP1 solute carrier family 27 member 1 19p13.11 CV:PGCnp
DMG:Wockner_2014
9524 TECR GPSN2 | MRT14 | SC2 | TER trans-2,3-enoyl-CoA reductase 19p13.12 CV:PGCnp
3949 LDLR FH | FHC | LDLCQ2 low density lipoprotein receptor 19p13.2 CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1455 CSNK1G2 CK1g2 casein kinase 1 gamma 2 19p13.3 CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
51129 ANGPTL4 ARP4 | FIAF | HARP | HFARP | NL2 | PGAR | TGQTL | UNQ171 | pp1158 angiopoietin like 4 19p13.3 CV:PGCnp
GO_Annotation
PMID:cooccur
344 APOC2 APO-CII | APOC-II apolipoprotein C-II 19q13.2 CV:PGCnp
348 APOE AD2 | APO-E | LDLCQ5 | LPG apolipoprotein E 19q13.2 Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
56848 SPHK2 SK 2 | SK-2 | SPK 2 | SPK-2 sphingosine kinase 2 19q13.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3991 时间 AOMS4 | FPLD6 | HSL | LHS lipase E, hormone sensitive type 19q13.2 PMID:cooccur
55588 MED29 IXL | MED2 mediator complex subunit 29 19q13.2 DNM:Fromer_2014
Network
CompositeSet
5296 PIK3R2 MPPH | MPPH1 | P85B | p85 | p85-BETA phosphoinositide-3-kinase regulatory subunit 2 19q13.2-q13.4 CV:PGCnp
DMG:Wockner_2014
Network
8463 TEAD2 ETF | TEAD-2 | TEF-4 | TEF4 TEA domain transcription factor 2 19q13.3 DMG:Wockner_2014
81857 MED25 ACID1 | ARC92 | BVSYS | CMT2B2 | P78 | PTOV2 | TCBAP0758 mediator complex subunit 25 19q13.3 CV:PGCnp
DMG:Wockner_2014
8605 PLA2G4C CPLA2-gamma phospholipase A2 group IVC 19q13.3 Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
3972 LHB CGB4 | HH23 | LSH-B | LSH-beta luteinizing hormone beta polypeptide 19q13.32 PMID:cooccur
79143 MBOAT7 BB1 | LENG4 | LPIAT | LRC4 | MBOA7 | OACT7 | hMBOA-7 membrane bound O-acyltransferase domain containing 7 19q13.4 CV:PGCnp
DMG:Jaffe_2016
10998 SLC27A5 ACSB | ACSVL6 | BACS | BAL | FACVL3 | FATP-5 | FATP5 | VLACSR | VLCS-H2 | VLCSH2 solute carrier family 27 member 5 19q13.43 CV:PGCnp
3283 HSD3B1 3BETAHSD | HSD3B | HSDB3 | HSDB3A | I | SDR11E1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 1p13.1 CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
3284 HSD3B2 HSD3B | HSDB | SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 1p13.1 CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
34 ACADM ACAD1 | MCAD | MCADH acyl-CoA dehydrogenase, C-4 to C-12 straight chain 1p31 CV:PGCnp
GSMA_IIA
5563 PRKAA2 AMPK | AMPK2 | AMPKa2 | PRKAA protein kinase AMP-activated catalytic subunit alpha 2 1p31 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5567 PRKACB PKA C-beta | PKACB protein kinase cAMP-activated catalytic subunit beta 1p31.1 CV:PGCnp
GSMA_IIA
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1376 CPT2 CPT1 | CPTASE | IIAE4 carnitine palmitoyltransferase 2 1p32 CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
6342 SCP2 NLTP | NSL-TP | SCP-2 | SCP-CHI | SCP-X | SCPX sterol carrier protein 2 1p32 CV:PGCnp
DMG:Wockner_2014
1718 DHCR24 DCE | Nbla03646 | SELADIN1 | seladin-1 24-dehydrocholesterol reductase 1p32.3 CV:PGCnp
DMG:Montano_2016
GO_Annotation
8503 PIK3R3 p55 | p55-GAMMA | p55PIK phosphoinositide-3-kinase regulatory subunit 3 1p34.1 CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
112950 MED8 ARC32 mediator complex subunit 8 1p34.2 CV:PGCnp
64834 ELOVL1 CGI-88 | Ssc1 ELOVL fatty acid elongase 1 1p34.2 CV:PGCnp
54797 MED18 p28b mediator complex subunit 18 1p35.3 CV:PGCnp
DMG:Jaffe_2016
3339 HSPG2 HSPG | PLC | PRCAN | SJA | SJS | SJS1 heparan sulfate proteoglycan 2 1p36.1-p34 CV:PGCnp
DNM:Ambalavanan_2016
PMID:cooccur
26119 LDLRAP1 ARH | ARH1 | ARH2 | FHCB1 | FHCB2 low density lipoprotein receptor adaptor protein 1 1p36.11 CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
5293 PIK3CD APDS | IMD14 | P110DELTA | PI3K | p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta 1p36.2 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2629 GBA GBA1 | GCB | GLUC glucosidase, beta, acid 1q21 CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
5298 PI4KB NPIK | PI4K-BETA | PI4K92 | PI4KBETA | PI4KIIIBETA | PIK4CB phosphatidylinositol 4-kinase beta 1q21 CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
5565 PRKAB2 - protein kinase AMP-activated non-catalytic subunit beta 2 1q21.1 CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
PMID:cooccur
2224 FDPS FPPS | FPS | POROK9 farnesyl diphosphate synthase 1q22 CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
10654 PMVK HUMPMKI | PMK | PMKA | PMKASE | POROK1 phosphomevalonate kinase 1q22 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
5321 PLA2G4A PLA2G4 | cPLA2 | cPLA2-alpha phospholipase A2 group IVA 1q31.1 Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
5287 PIK3C2B C2-PI3K phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 1q32 CV:PGCnp
DNM:Fromer_2014
CompositeSet
3290 HSD11B1 11-DH | 11-beta-HSD1 | CORTRD2 | HDL | HSD11 | HSD11B | HSD11L | SDR26C1 hydroxysteroid (11-beta) dehydrogenase 1 1q32-q41 CV:PGCnp
Expression
PMID:cooccur
8443 GNPAT DAP-AT | DAPAT | DHAPAT | RCDP2 glyceronephosphate O-acyltransferase 1q42 Association
CV:PGCnp
PMID:cooccur
CompositeSet
183 AGT ANHU | SERPINA8 angiotensinogen 1q42.2 CV:PGCnp
GO_Annotation
PMID:cooccur
9453 GGPS1 GGPPS | GGPPS1 geranylgeranyl diphosphate synthase 1 1q43 CV:PGCnp
DMG:Nishioka_2013
57761 TRIB3 C20orf97 | NIPK | SINK | SKIP3 | TRB3 tribbles pseudokinase 3 20p13-p12.2 CV:PGCnp
Network
PMID:cooccur
23054 NCOA6 AIB3 | ASC2 | NRC | PRIP | RAP250 | TRBP nuclear receptor coactivator 6 20q11 CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
64900 LPIN3 LIPN3L | SMP2 lipin 3 20q12 CV:PGCnp
1591 CYP24A1 CP24 | CYP24 | HCAI | P450-CC24 cytochrome P450 family 24 subfamily A member 1 20q13 CV:PGCnp
PMID:cooccur
5476 CTSA GLB2 | GSL | NGBE | PPCA | PPGB cathepsin A 20q13.1 DMG:Wockner_2014
GO_Annotation
9217 VAPB ALS8 | VAMP-B | VAP-B VAMP (vesicle-associated membrane protein)-associated protein B and C 20q13.33 CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
8867 SYNJ1 INPP5G | PARK20 synaptojanin 1 21q22.2 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
56894 AGPAT3 LPAAT-GAMMA1 | LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 21q22.3 CV:PGCnp CompositeSet
Darnell FMRP targets
4047 LSS CTRCT44 | OSC lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 21q22.3 CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
51586 MED15 ARC105 | CAG7A | CTG7A | PCQAP | TIG-1 | TIG1 | TNRC7 mediator complex subunit 15 22q11.2 Association
CNV:YES
CV:PGCnp
GSMA_I
Network
PMID:cooccur
5297 PI4KA PI4K-ALPHA | PIK4CA | PMGYCHA | pi4K230 phosphatidylinositol 4-kinase alpha 22q11.21 Association
CNV:YES
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CELL METABOLISM
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6576 SLC25A1 CTP | D2L2AD | SEA | SLC20A3 solute carrier family 25 member 1 22q11.21 CNV:YES
CV:PGCnp
DNM:Gulsuner_2013
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
23760 PITPNB PI-TP-beta | PtdInsTP | VIB1B phosphatidylinositol transfer protein beta 22q12.1 CV:PGCnp
Expression
GSMA_I
9514 GAL3ST1 CST galactose-3-O-sulfotransferase 1 22q12.2 CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
50487 PLA2G3 GIII-SPLA2 | SPLA2III | sPLA2-III phospholipase A2 group III 22q12.2 CV:PGCnp
GSMA_I
27124 INPP5J INPP5 | PIB5PA | PIPP inositol polyphosphate-5-phosphatase J 22q12.2 CV:GWASdb
CV:PGCnp
PMID:cooccur
6721 SREBF2 SREBP-2 | SREBP2 | bHLHd2 sterol regulatory element binding transcription factor 2 22q13 CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
8398 PLA2G6 CaI-PLA2 | GVI | INAD1 | IPLA2-VIA | NBIA2 | NBIA2A | NBIA2B | PARK14 | PLA2 | PNPLA9 | iPLA2 | iPLA2beta phospholipase A2 group VI 22q13.1 Association
CV:PGCnp
GR_Ng
GR_WM
PMID:cooccur
2033 EP300 KAT3B | RSTS2 | p300 E1A binding protein p300 22q13.2 CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
10478 SLC25A17 PMP34 solute carrier family 25 member 17 22q13.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
80339 PNPLA3 ADPN | C22orf20 | iPLA(2)epsilon patatin like phospholipase domain containing 3 22q13.31 CV:PGCnp
5465 PPARA NR1C1 | PPAR | PPARalpha | hPPAR peroxisome proliferator activated receptor alpha 22q13.31 CV:PGCnp
PMID:cooccur
64781 CERK LK4 | dA59H18.2 | dA59H18.3 | hCERK ceramide kinase 22q13.31 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Expression
CompositeSet
410 ARSA MLD arylsulfatase A 22q13.33 CV:PGCnp
PMID:cooccur
1375 CPT1B CPT1-M | CPT1M | CPTI | CPTI-M | M-CPT1 | MCCPT1 | MCPT1 carnitine palmitoyltransferase 1B 22q13.33 CV:PGCnp
PMID:cooccur
84693 MCEE GLOD2 methylmalonyl-CoA epimerase 2p13.3 CV:PGCnp
64241 ABCG8 GBD4 | STSL ATP binding cassette subfamily G member 8 2p21 CV:PGCnp
DMG:Wockner_2014
6716 SRD5A2 - steroid 5 alpha-reductase 2 2p23 CV:PGCnp
PMID:cooccur
5500 PPP1CB HEL-S-80p | PP-1B | PP1B | PP1beta | PPP1CD protein phosphatase 1 catalytic subunit beta 2p23 CV:PGCnp INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
3030 HADHA ECHA | GBP | HADH | LCEH | LCHAD | MTPA | TP-ALPHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 2p23 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5443 POMC ACTH | CLIP | LPH | MSH | NPP | POC proopiomelanocortin 2p23.3 CV:PGCnp
GO_Annotation
PMID:cooccur
338 APOB FLDB | LDLCQ4 | apoB-100 | apoB-48 apolipoprotein B 2p24-p23 CV:PGCnp
PMID:cooccur
6382 SDC1 CD138 | SDC | SYND1 | syndecan syndecan 1 2p24.1 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
29841 GRHL1 LBP32 | MGR | NH32 | TFCP2L2 grainyhead like transcription factor 1 2p25.1 CV:PGCnp
Expression
23175 LPIN1 PAP1 lipin 1 2p25.1 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
129642 MBOAT2 LPCAT4 | OACT2 membrane bound O-acyltransferase domain containing 2 2p25.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4862 NPAS2 MOP4 | PASD4 | bHLHe9 neuronal PAS domain protein 2 2q11.2 CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
253782 CERS6 CERS5 | LASS6 ceramide synthase 6 2q24.3 CV:PGCnp
GSMA_IIA
4036 LRP2 DBS | GP330 LDL receptor related protein 2 2 q31.1 CV:PGCnp
GO_Annotation
GSMA_IIA
Network
PMID:cooccur
Ascano FMRP targets
3417 IDH1 HEL-216 | HEL-S-26 | IDCD | IDH | IDP | IDPC | PICD isocitrate dehydrogenase 1 (NADP+) 2q33.3 CV:PGCnp
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL METABOLISM
Chromatin Remodeling Genes
2181 ACSL3 ACS3 | FACL3 | PRO2194 acyl-CoA synthetase long-chain family member 3 2q34-q35 CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
CELL METABOLISM
CompositeSet
1593 CYP27A1 CP27 | CTX | CYP27 cytochrome P450 family 27 subfamily A member 1 2q35 GSMA_IIA
GSMA_IIE
PMID:cooccur
54600 UGT1A9 HLUGP4 | LUGP4 | UDPGT | UDPGT 1 - 9 | UGT-1I | UGT1-09 | UGT1-9 | UGT1.9 | UGT1A9S | UGT1AI | UGT1I UDP glucuronosyltransferase family 1 member A9 2q37 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4759 NEU2 SIAL2 neuraminidase 2 (cytosolic sialidase) 2q37 CV:GWAScat
CV:PGCnp
51099 ABHD5 CDS | CGI58 | IECN2 | NCIE2 abhydrolase domain containing 5 3p21 CV:PGCnp
DMG:Jaffe_2016
211 ALAS1 ALAS | ALAS-H | ALAS3 | ALASH | MIG4 5'-aminolevulinate synthase 1 3p21.1 CV:PGCnp
DNM:Fromer_2014
LK:YES
CompositeSet
Ascano FMRP targets
788 SLC25A20 CAC | CACT solute carrier family 25 member 20 3p21.31 CV:PGCnp
DMG:Wockner_2014
Expression
2720 GLB1 EBP | ELNR1 | MPS4B galactosidase beta 1 3p21.33 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
Ascano FMRP targets
23171 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1-like 3p22.3 CV:PGCnp
GSMA_I
5468 PPARG CIMT1 | GLM1 | NR1C3 | PPARG1 | PPARG2 | PPARgamma peroxisome proliferator activated receptor gamma 3p25 CV:PGCnp
GSMA_I
PMID:cooccur
64419 MTMR14 C3orf29 myotubularin related protein 14 3p26 CV:PGCnp
DMG:vanEijk_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
5096 PCCB - propionyl-CoA carboxylase beta subunit 3q21-q22 CV:PGCnp
DMG:Jaffe_2016
11343 MGLL HU-K5 | HUK5 | MAGL | MGL monoglyceride lipase 3q21.3 CV:PGCnp
PMID:cooccur
CANABINOID
CELL METABOLISM
30849 PIK3R4 VPS15 | p150 phosphoinositide-3-kinase regulatory subunit 4 3q22.1 CV:PGCnp Ascano FMRP targets
5291 PIK3CB P110BETA | PI3K | PI3KBETA | PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta 3q22.3 CV:PGCnp
DNM:Girard_2011
Network
CompositeSet
25937 WWTR1 TAZ WW domain containing transcription regulator 1 3q23-q24 CV:PGCnp
5337 PLD1 - phospholipase D1 3q26 CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
151742 PPM1L PP2C-epsilon | PP2CE | PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L 3q26.1 CV:PGCnp
5290 PIK3CA CLOVE | CWS5 | MCAP | MCM | MCMTC | PI3K | p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha 3q26.3 CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
79718 TBL1XR1 C21 | DC42 | IRA1 | TBLR1 transducin (beta)-like 1 X-linked receptor 1 3q26.32 CV:GWASdb
CV:PGCnp
5130 PCYT1A CCTA | CT | CTA | CTPCT | PCYT1 | SMDCRD phosphate cytidylyltransferase 1, choline, alpha 3q29 CNV:YES
CV:PGCnp
622 BDH1 BDH | SDR9C1 3-hydroxybutyrate dehydrogenase, type 1 3q29 CNV:YES
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
10891 PPARGC1A LEM6 | PGC-1(alpha) | PGC-1alpha | PGC-1v | PGC1 | PGC1A | PPARGC1 PPARG coactivator 1 alpha 4p15.1 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
55300 PI4K2B PI4KIIB | PIK42B phosphatidylinositol 4-kinase type 2 beta 4p15.2 CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
8310 ACOX3 - acyl-CoA oxidase 3, pristanoyl 4p15.3 CV:PGCnp
DMG:Nishioka_2013
9575 CLOCK KAT13D | bHLHe8 clock circadian regulator 4q12 Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2638 GC DBP | DBP/GC | GRD3 | Gc-MAF | GcMAF | HEL-S-51 | VDBG | VDBP group-specific component (vitamin D binding protein) 4q12-q13 Association
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GR_WM
PMID:cooccur
4547 MTTP ABL | MTP microsomal triglyceride transfer protein 4q24 CV:PGCnp
PMID:cooccur
81579 PLA2G12A GXII | PLA2G12 | ROSSY phospholipase A2 group XIIA 4q25 CV:PGCnp
DMG:Wockner_2014
79071 ELOVL6 FACE | FAE | LCE ELOVL fatty acid elongase 6 4q25 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
166929 SGMS2 SMS2 sphingomyelin synthase 2 4q25 CV:PGCnp
8821 INPP4B - inositol polyphosphate-4-phosphatase type II B 4q31.21 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
9227 LRAT LCA14 lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) 4q32.1 CV:PGCnp
CV:PheWAS
3157 HMGCS1 HMGCS 3-hydroxy-3-methylglutaryl-CoA synthase 1 5p12 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23600 AMACR AMACRD | CBAS4 | RACE | RM alpha-methylacyl-CoA racemase 5p13 PMID:cooccur
6715 SRD5A1 S5AR 1 steroid 5 alpha-reductase 1 5p15 CV:PGCnp
PMID:cooccur
84246 MED10 L6 | NUT2 | TRG20 mediator complex subunit 10 5p15.31 CV:GWASdb
CV:PGCnp
79888 LPCAT1 AGPAT10 | AGPAT9 | AYTL2 | PFAAP3 | lpcat lysophosphatidylcholine acyltransferase 1 5p15.33 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
79993 ELOVL7 - ELOVL fatty acid elongase 7 5q12.1 CV:PGCnp
DMG:Wockner_2014
3074 HEXB ENC-1AS | HEL-248 | HEL-S-111 hexosaminidase subunit beta 5q13 CV:PGCnp
GO_Annotation
PMID:cooccur
5295 PIK3R1 AGM7 | GRB1 | IMD36 | p85 | p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 5q13.1 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
PMID:cooccur
10087 COL4A3BP CERT | CERTL | GPBP | MRD34 | STARD11 collagen type IV alpha 3 binding protein 5q13.3 CV:PGCnp
3156 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase 5q13.3-q14 CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
134429 STARD4 - StAR related lipid transfer domain containing 4 5q22.1 CV:PGCnp
DMG:Wockner_2014
Expression
8841 HDAC3 HD3 | RPD3 | RPD3-2 histone deacetylase 3 5q31 GSMA_I
PMID:cooccur
Chromatin Remodeling Genes
51128 SAR1B ANDD | CMRD | GTBPB | SARA2 secretion associated Ras related GTPase 1B 5q31.1 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
23305 ACSL6 ACS2 | FACL6 | LACS 6 | LACS2 | LACS5 acyl-CoA synthetase long-chain family member 6 5q31.1 Association
CV:GWASdb
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
133522 PPARGC1B ERRL1 | PERC | PGC-1(beta) | PGC1B PPARG coactivator 1 beta 5q32 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
2172 FABP6 I-15P | I-BABP | I-BALB | I-BAP | ILBP | ILBP3 | ILLBP 脂肪交流id binding protein 6 5q33.3-q34 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
60481 ELOVL5 HELO1 | SCA38 | dJ483K16.1 ELOVL fatty acid elongase 5 6p12.1 CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
51302 CYP39A1 - cytochrome P450 family 39 subfamily A member 1 6p12.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
4594 MUT MCM methylmalonyl-CoA mutase 6p12.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_IIE
PMID:cooccur
27242 TNFRSF21 BM-018 | CD358 | DR6 tumor necrosis factor receptor superfamily member 21 6p21.1 CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
7005 TEAD3 DTEF-1 | ETFR-1 | TEAD-3 | TEAD5 | TEF-5 | TEF5 TEA domain transcription factor 3 6p21.2 CV:PGCnp
GSMA_I
GSMA_IIE
PMID:cooccur
4800 NFYA CBF-A | CBF-B | HAP2 | NF-YA nuclear transcription factor Y subunit alpha 6p21.3 CV:GWASdb
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
80736 SLC44A4 C6orf29 | CTL4 | NG22 | TPPT solute carrier family 44 member 4 6p21.3 CV:PGCnp
GSMA_I
PMID:cooccur
10554 AGPAT1 1-AGPAT1 | G15 | LPAAT-alpha | LPAATA 1-acylglycerol-3-phosphate O-acyltransferase 1 6p21.3 CV:PGCnp
GSMA_I
4758 NEU1 NANH | NEU | SIAL1 neuraminidase 1 (lysosomal sialidase) 6p21.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
1208 CLPS - colipase 6p21.31 CV:PGCnp
GSMA_I
GSMA_IIE
PMID:cooccur
154141 MBOAT1 LPEAT1 | LPLAT | LPLAT 1 | LPSAT | OACT1 | dJ434O11.1 membrane bound O-acyltransferase domain containing 1 6p22.3 CV:PGCnp
Expression
GSMA_I
54898 ELOVL2 SSC2 ELOVL fatty acid elongase 2 6p24.2 CV:PGCnp
GSMA_I
PMID:cooccur
4199 ME1 HUMNDME | MES malic enzyme 1, NADP(+)-dependent, cytosolic 6q12 CV:PGCnp
6785 ELOVL4 ADMD | CT118 | ISQMR | SCA34 | STGD2 | STGD3 ELOVL fatty acid elongase 4 6q14 CV:PGCnp
DMG:Wockner_2014
1081 CGA CG-ALPHA | FSHA | GPHA1 | GPHa | HCG | LHA | TSHA glycoprotein hormones, alpha polypeptide 6q14.3 CV:PGCnp
PMID:cooccur
23097 CDK19 CDC2L6 | CDK11 | bA346C16.3 cyclin-dependent kinase 19 6q21 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
9439 MED23 ARC130 | CRSP130 | CRSP133 | CRSP3 | DRIP130 |捷运18 | SUR-2 | SUR2 mediator complex subunit 23 6q22.33-q24.1 CV:PGCnp
DMG:Jaffe_2016
26230 TIAM2 STEF | TIAM-2 T-cell lymphoma invasion and metastasis 2 6q25.2 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
8871 SYNJ2 INPP5H synaptojanin 2 6q25.3 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
4018 LPA AK38 | APOA | LP lipoprotein, Lp(a) 6q26 CV:PGCnp
GO_Annotation
PMID:cooccur
25870 SUMF2 pFGE sulfatase modifying factor 2 7q11.1 CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
948 CD36 BDPLT10 | CHDS7 | FAT | GP3B | GP4 | GPIV | PASIV | SCARB3 CD36 molecule 7q11.2 CV:GWASdb
CV:PGCnp
PMID:cooccur
5244 ABCB4 ABC21 | GBD1 | ICP3 | MDR2 | MDR2/3 | MDR3 | PFIC-3 | PGY3 ATP binding cassette subfamily B member 4 7q21.1 CV:PGCnp
PMID:cooccur
54677 CROT COT carnitine O-octanoyltransferase 7q21.1 CV:PGCnp
1595 CYP51A1 CP51 | CYP51 | CYPL1 | LDM | P450-14DM | P450L1 cytochrome P450 family 51 subfamily A member 1 7q21.2 DMG:Jaffe_2016
DMG:Wockner_2014
43 ACHE ACEE | ARACHE | N-ACHE | YT acetylcholinesterase (Yt blood group) 7q22 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
50640 PNPLA8 IPLA2-2 | IPLA2G | MMLA | PNPLA-gamma | iPLA2gamma patatin like phospholipase domain containing 8 7q31 CV:PGCnp
DMG:Wockner_2014
857 CAV1 BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21 caveolin 1 7q31.1 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
6718 AKR1D1 3o5bred | CBAS2 | SRD5B1 aldo-keto reductase family 1, member D1 7q32-q33 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
231 AKR1B1 ADR | ALDR1 | ALR2 | AR aldo-keto reductase family 1, member B1 (aldose reductase) 7q35 CV:PGCnp
DMG:Jaffe_2016
6604 SMARCD3 BAF60C | CRACD3 | Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 7q35-q36 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
Chromatin Remodeling Genes
51422 PRKAG2 AAKG | AAKG2 | CMH6 | H91620p | WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 7q36.1 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6770 STAR STARD1 steroidogenic acute regulatory protein 8p11.2 CV:PGCnp
PMID:cooccur
649 BMP1 OI13 | PCOLC | PCP | PCP2 | TLD bone morphogenetic protein 1 8p21.3 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
9108 MTMR7 - myotubularin related protein 7 8p22 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
427 ASAH1 PHP AC | ACDase | ASAH表示| | PHP32 | SMAPME N-acylsphingosine amidohydrolase (acid ceramidase) 1 8p22 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4023 LPL HDLCQ11 | LIPD lipoprotein lipase 8p22 CV:GWASdb
CV:PGCnp
CV:PheWAS
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
55326 AGPAT5 1AGPAT5 | LPAATE 1-acylglycerol-3-phosphate O-acyltransferase 5 8p23.1 CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
2222 FDFT1 DGPT | ERG9 | SQS | SS farnesyl-diphosphate farnesyltransferase 1 8p23.1-p22 CV:PGCnp
DMG:Jaffe_2016
1581 CYP7A1 CP7A | CYP7 | CYPVII cytochrome P450 family 7 subfamily A member 1 8q11-q12 CV:PGCnp
2167 FABP4 A-FABP | AFABP | ALBP | HEL-S-104 | aP2 脂肪交流id binding protein 4 8q21 DNM:Fromer_2014
PMID:cooccur
CompositeSet
9420 CYP7B1 CBAS3 | CP7B | SPG5A cytochrome P450 family 7 subfamily B member 1 8q21.3 CV:GWASdb
CV:PGCnp
1666 DECR1 DECR | NADPH | SDR18C1 2,4-dienoyl-CoA reductase 1, mitochondrial 8q21.3 CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
9791 PTDSS1 LMHD | PSS1 | PSSA phosphatidylserine synthase 1 8q22 CV:PGCnp
6713 SQLE - squalene epoxidase 8q24.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
90390 MED30 MED30S | THRAP6 | TRAP25 mediator complex subunit 30 8q24.11 CV:PGCnp
123 PLIN2 ADFP | ADRP perilipin 2 9p22.1 CV:PGCnp
PMID:cooccur
340485 ACER2 ALKCDase2 | ASAH3L alkaline ceramidase 2 9p22.1 CV:GWASdb
CV:PGCnp
5568 PRKACG BDPLT19 | KAPG | PKACg protein kinase cAMP-activated catalytic subunit gamma 9q13 CV:PGCnp
DMG:Wockner_2014
8395 PIP5K1B MSS4 | STM7 phosphatidylinositol-4-phosphate 5-kinase, type I, beta 9q13 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
10558 SPTLC1 HSAN1 | HSN1 | LBC1 | LCB1 | SPT1 | SPTI serine palmitoyltransferase long chain base subunit 1 9q22.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
7357 UGCG GCS | GLCT1 UDP-glucose ceramide glucosyltransferase 9q31 CV:PGCnp
19 ABCA1 ABC-1 | ABC1 | CERP | HDLDT1 | TGD ATP结合盒亚科一员1 9q31.1 CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
1384 CRAT CAT1 carnitine O-acetyltransferase 9q34.1 CV:PGCnp
9442 MED27 CRAP34 | CRSP34 | CRSP8 | MED3 | TRAP37 mediator complex subunit 27 9q34.13 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
6837 MED22 MED24 | SURF5 | surf-5 mediator complex subunit 22 9q34.2 CV:PGCnp
56623 INPP5E CORS1 | CPD4 | JBTS1 | MORMS | PPI5PIV inositol polyphosphate-5-phosphatase E 9q34.3 CV:PGCnp
DMG:Jaffe_2016
6256 RXRA NR2B1 retinoid X receptor alpha 9q34.3 CV:GWAScat
CV:PGCnp
PMID:cooccur
10682 EBP CDPX2 | CHO2 | CPX | CPXD | MEND emopamil binding protein (sterol isomerase) Xp11.23-p11.22 CV:PGCnp
PMID:cooccur
2710 GK GK1 | GKD glycerol kinase Xp21.3 CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
CELL METABOLISM
415 ARSE ASE | CDPX | CDPX1 | CDPXR arylsulfatase E (chondrodysplasia punctata 1) Xp22.3 CV:PGCnp
DNM:Fromer_2014
CompositeSet
412 STS ARSC | ARSC1 | ASC | ES | SSDD | XLI steroid sulfatase (microsomal), isozyme S Xp22.32 CV:PGCnp
Expression
PMID:cooccur
9968 MED12 ARC240 | CAGH45 | FGS1 | HOPA | MED12S | OHDOX | OKS | OPA1 | TNRC11 | TRAP230 mediator complex subunit 12 Xq13 Association
CV:PGCnp
DEG:Zhao_2015
GR_Ng
GR_WM
PMID:cooccur
Ascano FMRP targets
2717 GLA GALA galactosidase alpha Xq22 GO_Annotation
PMID:cooccur
2182 ACSL4 ACS4 | FACL4 | LACS4 | MRX63 | MRX68 acyl-CoA synthetase long-chain family member 4 Xq22.3-q23 CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes
215 ABCD1 ABC42 | ALD | ALDP | AMN ATP binding cassette subfamily D member 1 Xq28 CV:GWAScat
CV:GWASdb
CV:PGCnp


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