Search results: The pahtwayp1348has 267 genes in the original annotation. Currently, there are 178 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
22921 MSRB2 CBS-1 | CBS1 | CGI-131 | MSRB | PILB methionine sulfoxide reductase B2 10p12 CV:PGCnp
PMID:cooccur
5264 PHYH LN1 | LNAP1 | PAHX | PHYH1 | RD phytanoyl-CoA 2-hydroxylase 10p13 CV:PGCnp
GO_Annotation
PMID:cooccur
7431 VIM CTRCT30 | HEL113 vimentin 10p13 CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7570 ZNF22 HKR-T1 | KOX15 | ZNF422 | Zfp422 zinc finger protein 22 10q11 CV:PGCnp
5092 PCBD1 DCOH | PCBD | PCD | PHS pterin-4 alpha-carbinolamine dehydratase 1 10q22 CV:PGCnp
11155 LDB3 CMD1C | CMH24 | CMPD3 | CYPHER | LDB3Z1 | LDB3Z4 | LVNC3 | MFM4 | ORACLE | PDLIM6 | ZASP LIM domain binding 3 10q22.3-q23.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
9446 GSTO1 GSTO 1-1 | GSTTLp28 | HEL-S-21 | P28 | SPG-R glutathione S-transferase omega 1 10q25.1 CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
9531 BAG3 BAG-3 | BIS | CAIR-1 | MFM6 BCL2 associated athanogene 3 10q25.2-q26.2 CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
7390 UROS UROIIIS uroporphyrinogen III synthase 10q25.2-q26.3 CV:PGCnp
GSMA_IIA
5896 RAG1 RAG-1 | RNF74 recombination activating gene 1 11p13 CV:PGCnp
54765 TRIM44 DIPB | HSA249128 | MC7 tripartite motif containing 44 11p13 CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
2188 FANCF FAF Fanconi anemia complementation group F 11p15 CV:PGCnp
DMG:Jaffe_2016
51700 CYB5R2 B5R.2 cytochrome b5 reductase 2 11p15.4 CV:PGCnp
23258 DENND5A RAB6IP1 DENN domain containing 5A 11p15.4 CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR TRAFFICKING
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8519 IFITM1 9-27 | CD225 | DSPA2a | IFI17 | LEU13 interferon induced transmembrane protein 1 11p15.5 DMG:Montano_2016
Expression
PMID:cooccur
9246 UBE2L6 RIG-B | UBCH8 ubiquitin conjugating enzyme E2 L6 11q12 CV:PGCnp
9415 FADS2 D6D | DES6 | FADSD6 | LLCDL2 | SLL0262 | TU13 fatty acid desaturase 2 11q12.2 CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3992 FADS1 D5D | FADS6 | FADSD5 | LLCDL1 | TU12 fatty acid desaturase 1 11q12.2-q13.1 DEG:Sanders_2013
PMID:cooccur
5499 PPP1CA PP-1A | PP1A | PP1alpha | PPP1A protein phosphatase 1 catalytic subunit alpha 11q13 DMG:Montano_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Chromatin Remodeling Genes
9846 GAB2 - GRB2 associated binding protein 2 11q14.1 CV:PGCnp
DMG:Wockner_2014
8898 MTMR2 CMT4B | CMT4B1 myotubularin related protein 2 11q22 CV:PGCnp
837 CASP4 ICE(rel)II | ICEREL-II | ICH-2 | Mih1/TX | TX caspase 4 11q22.2-q22.3 CV:PGCnp
DNM:Girard_2011
GSMA_I
Network
PMID:cooccur
CompositeSet
834 CASP1 ICE | IL1BC | P45 caspase 1 11q23 DEG:Sanders_2013
GSMA_I
Network
1027 CDKN1B CDKN4 | KIP1 | MEN1B | MEN4 | P27KIP1 cyclin-dependent kinase inhibitor 1B 12p13.1-p12 CV:PGCnp
Network
PMID:cooccur
25900 IFFO1 HOM-TES-103 | IFFO intermediate filament family orphan 1 12p13.3 DMG:Jaffe_2016
DMG:Wockner_2014
928 CD9 BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29 CD9 molecule 12p13.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
10206 TRIM13 CAR | DLEU5 | LEU5 | RFP2 | RNF77 tripartite motif containing 13 13q14 CV:PGCnp
9617 MTRF1 MRF1 | MTTRF1 | RF1 mitochondrial translational release factor 1 13q14.1-q14.3 CV:PGCnp
PMID:cooccur
4752 NEK3 HSPK36 NIMA related kinase 3 13q14.13 CV:PGCnp
55608 ANKRD10 - ankyrin repeat domain 10 13q34 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
5720 PSME1 HEL-S-129m | IFI5111 | PA28A | PA28alpha | REGalpha proteasome activator subunit 1 14q11.2 GSMA_I
PMID:cooccur
57820 CCNB1IP1 C14orf18 | HEI10 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 14q11.2 CV:GWASdb
CV:PGCnp
GSMA_I
60485 SAV1 SAV | WW45 | WWP4 salvador family WW domain containing protein 1 14q13-q23 CV:PGCnp
CV:PheWAS
6166 RPL36AL RPL36A ribosomal protein L36a like 14q21 CV:PGCnp
4247 MGAT2 CDG2A | CDGS2 | GLCNACTII | GNT-II | GNT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 14q21 CV:PGCnp
81542 TMX1 PDIA11 | TMX | TXNDC | TXNDC1 thioredoxin related transmembrane protein 1 14q22.1 CV:PGCnp
9240 PNMA1 MA1 paraneoplastic Ma antigen 1 14q24.3 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
10577 NPC2 EDDM1 | HE1 Niemann-Pick disease, type C2 14q24.3 CV:PGCnp
PMID:cooccur
9556 C14orf2 MP68 | PLPM chromosome 14 open reading frame 2 14q32.33 CV:PGCnp
2628 GATM AGAT | AT | CCDS3 glycine amidinotransferase 15q21.1 DMG:Wockner_2014
302 ANXA2 ANX2 | ANX2L4 | CAL1H | HEL-S-270 | LIP2 | LPC2 | LPC2D | P36 | PAP-IV annexin A2 15q22.2 CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
400451 FAM174B - family with sequence similarity 174 member B 15q26.1 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
29108 PYCARD ASC | CARD5 | TMS | TMS-1 | TMS1 PYD and CARD domain containing 16p11.2 CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
CompositeSet
23475 QPRT HEL-S-90n | QPRTase quinolinate phosphoribosyltransferase 16p11.2 CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
2975 GTF3C1 TFIIIC | TFIIIC220 | TFIIICalpha general transcription factor IIIC subunit 1 16p12 CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7874 USP7 HAUSP | TEF1 ubiquitin specific peptidase 7 (herpes virus-associated) 16p13.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
Ascano FMRP targets
4501 MT1X MT-1l | MT1 metallothionein 1X 16q13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3281 HSBP1 NPC-A-13 heat shock factor binding protein 1 16q23.3 CV:PGCnp
7157 TP53 BCC7 | LFS1 | P53 | TRP53 tumor protein p53 17p13.1 协会
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
64359 NXN NRX | TRG-4 nucleoredoxin 17p13.3 CV:PGCnp
DMG:Wockner_2014
5176 SERPINF1 EPC-1 | OI12 | OI6 | PEDF | PIG35 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 17p13.3 CV:PGCnp
GO_Annotation
9501 RPH3AL NOC2 rabphilin 3A-like (without C2 domains) 17p13.3 CV:GWASdb
CV:PGCnp
9527 GOSR1 GOLIM2 | GOS-28 | GOS28 | GOS28/P28 | GS28 | P28 golgi SNAP receptor complex member 1 17q11 CV:PGCnp
GO_Annotation
6605 SMARCE1 BAF57 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 17q21.2 CV:PGCnp
Network
PMID:cooccur
Chromatin Remodeling Genes
8631 SKAP1 HEL-S-81p | SCAP1 | SKAP55 src磷蛋白质相关激酶1 17q21.32 CV:PGCnp
DMG:Wockner_2014
58488 PCTP PC-TP | STARD2 phosphatidylcholine transfer protein 17q22 CV:PGCnp
DMG:Nishioka_2013
9123 SLC16A3 MCT 3 | MCT 4 | MCT-3 | MCT-4 | MCT3 | MCT4 solute carrier family 16 member 3 17q25 CV:PGCnp
DMG:Wockner_2014
3959 LGALS3BP 90K | BTBD17B | CyCAP | M2BP | MAC-2-BP | TANGO10B | gp90 凝集素,galactoside-binding, soluble, 3 binding protein 17q25 CV:PGCnp
DMG:vanEijk_2014
6925 TCF4 E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19 transcription factor 4 18q21.1 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
4155 MBP - myelin basic protein 18q23 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
55900 ZNF302 HSD16 | MST154 | MSTP154 | ZNF135L | ZNF140L | ZNF327 zinc finger protein 302 19q13.11 CV:PGCnp
DMG:Jaffe_2016
51070 NOSIP CGI-25 nitric oxide synthase interacting protein 19q13.33 CV:PGCnp
DMG:Jaffe_2016
27300 ZNF544 - zinc finger protein 544 19q13.43 CV:PGCnp
DMG:Wockner_2014
965 CD58 LFA-3 | LFA3 | ag3 CD58 molecule 1p13 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_I
GSMA_IIA
4853 NOTCH2 AGS2 | HJCYS | hN2 notch 2 1p13-p11 CV:PGCnp
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
57535 KIAA1324 EIG121 KIAA1324 1p13.3 CV:PGCnp
DMG:Wockner_2014
79961 DENND2D - DENN domain containing 2D 1p13.3 CV:PGCnp
DMG:vanEijk_2014
GSMA_I
5142 PDE4B DPDE4 | PDEIVB phosphodiesterase 4B 1p31 协会
CV:GWASdb
CV:PGCnp
GR_Ng
GSMA_IIA
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9903 KLHL21 - kelch like family member 21 1p36.31 CV:PGCnp Ascano FMRP targets
65220 NADK dJ283E3.1 NAD kinase 1p36.33 CV:PGCnp
DMG:Wockner_2014
6282 S100A11 HEL-S-43 | MLN70 | S100C S100 calcium binding protein A11 1q21 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
26092 TOR1AIP1 LAP1 | LAP1B torsin 1A interacting protein 1 1q24.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
认为:顾lsuner_2013
9019 MPZL1 MPZL1b | PZR | PZR1b | PZRa | PZRb myelin protein zero like 1 1q24.2 协会
CV:PGCnp
PMID:cooccur
7678 ZNF124 HZF-16 | HZF16 | ZK7 zinc finger protein 124 1q44 CV:GWAScat
CV:PGCnp
6238 RRBP1 ES/130 | ES130 | RRp | hES ribosome binding protein 1 20p12 CV:PGCnp
Expression
GSMA_I
RNA AND PROTEIN SYNTHESIS
Ascano FMRP targets
64601 VPS16 hVPS16 VPS16, CORVET/HOPS core subunit 20p13 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
655 BMP7 OP-1 bone morphogenetic protein 7 20q13 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
1002 CDH4 CAD4 | R-CAD | RCAD cadherin 4 20q13.3 CV:GWASdb
CV:PGCnp
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
9946 CRYZL1 4P11 | QOH-1 crystallin zeta like 1 21q21.3 CV:PGCnp
10069 RWDD2B C21orf6 | GL011 RWD domain containing 2B 21q22.11 CV:PGCnp
DMG:Wockner_2014
4600 MX2 MXB MX dynamin like GTPase 2 21q22.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9647 PPM1F CAMKP | CaMKPase | FEM-2 | POPX2 | hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F 22q11.22 CV:GWASdb
CV:PGCnp
GSMA_I
3543 IGLL1 14.1 | AGM2 | CD179b | IGL1 | IGL5 | IGLJ14.1 | IGLL | IGO | IGVPB | VPREB2 immunoglobulin lambda like polypeptide 1 22q11.23 CV:GWASdb
CV:PGCnp
CV:PheWAS
GSMA_I
613 BCR ALL | BCR1 | CML | D22S11 | D22S662 | PHL breakpoint cluster region 22q11.23 CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7494 XBP1 TREB-5 | TREB5 | XBP-1 | XBP2 X-box binding protein 1 22q12.1|22q12 协会
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
706 TSPO BPBS | BZRP | DBI | IBP | MBR | PBR | PBS | PKBS | PTBR | mDRC | pk18 translocator protein 22q13.31 ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
79174 CRELD2 - cysteine rich with EGF like domains 2 22q13.33 CV:PGCnp
10617 STAMBP AMSH | MICCAP STAM binding protein 2p13.1 CV:PGCnp
Network
6711 SPTBN1 ELF | HEL102 | SPTB2 | betaSpII spectrin beta, non-erythrocytic 1 2p21 CV:GWASdb
CV:PGCnp
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
80745 THUMPD2 C2orf8 THUMP domain containing 2 2p22.1|2p22-p21 CV:PGCnp
1788 DNMT3A DNMT3A2 | M.HsaIIIA | TBRS DNA (cytosine-5-)-methyltransferase 3 alpha 2p23 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
9577 BRE BRCC4 | BRCC45 brain and reproductive organ-expressed (TNFRSF1A modulator) 2p23.2 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1876 E2F6 E2F-6 E2F transcription factor 6 2p25.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
23505 TMEM131 CC28 | PRO1048 | RW1 | YR-23 transmembrane protein 131 2q11.2 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7535 ZAP70 SRK | STCD | STD | TZK | ZAP-70 zeta chain of T cell receptor associated protein kinase 70kDa 2q12 CV:PGCnp
GO_Annotation
GSMA_I
7852 CXCR4 CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMS C-X-C motif chemokine receptor 4 2q21 CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
64135 IFIH1 AGS7 | Hlcd | IDDM19 | MDA-5 | MDA5 | RLR-2 | SGMRT1 interferon induced, with helicase C domain 1 2q24 CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
4065 LY75 CD205 | CLEC13B | DEC-205 | GP200-MR6 | LY-75 lymphocyte antigen 75 2q24 CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
253782 CERS6 CERS5 | LASS6 ceramide synthase 6 2q24.3 CV:PGCnp
GSMA_IIA
6772 STAT1 CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91 signal transducer and activator of transcription 1 2q32.2 CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
23314 SATB2 GLSS SATB homeobox 2 2q33 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
9330 GTF3C3 TFIIIC102 | TFIIICgamma | TFiiiC2-102 general transcription factor IIIC subunit 3 2q33.1 CV:PGCnp Ascano FMRP targets
11262 SP140 LYSP100 | LYSP100-A | LYSP100-B SP140 nuclear body protein 2q37.1 CV:PGCnp
8801 SUCLG2 GBETA succinate-CoA ligase, GDP-forming, beta subunit 3p14.1 CV:PGCnp
2876 GPX1 GPXD | GSHPX1 glutathione peroxidase 1 3p21.3 CV:PGCnp
PMID:cooccur
4615 MYD88 MYD88D myeloid differentiation primary response 88 3p22 CV:PGCnp
GSMA_I
PMID:cooccur
9943 OXSR1 OSR1 oxidative stress responsive 1 3p22.2 CV:PGCnp
GSMA_I
PMID:cooccur
6304 SATB1 - SATB homeobox 1 3p23 CV:PGCnp
DMG:Montano_2016
GSMA_I
PMID:cooccur
Chromatin Remodeling Genes
6419 SETMAR METNASE | Mar1 SET domain and mariner transposase fusion gene 3p26.1 CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
10342 TFG HMSNP | SPG57 | TF6 | TRKT3 TRK-fused gene 3q12.2 DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CompositeSet
56954 NIT2 HEL-S-8a nitrilase family member 2 3q12.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
55081 IFT57 ESRRBL1 | HIPPI | MHS4R2 intraflagellar transport 57 3q13.13 CV:PGCnp
GSMA_IIA
GSMA_IIE
6184 RPN1 OST1 | RBPH1 ribophorin I 3q21.3 CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23129 PLXND1 PLEXD1 plexin D1 3q22.1 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
8706 B3GALNT1 B3GALT3 | GLCT3 | GLOB | Gb4Cer | P | P1 | beta3Gal-T3 | galT3 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 3q25 CV:PGCnp
DMG:Jaffe_2016
56925 LXN ECI | TCI latexin 3q25.32 DMG:vanEijk_2014
64778 FNDC3B FAD104 | PRO4979 | YVTM2421 fibronectin type III domain containing 3B 3q26.31 CV:PGCnp
Expression
323 APBB2 FE65L | FE65L1 amyloid beta precursor protein binding family B member 2 4p13 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7358 UGDH GDH | UDP-GlcDH | UDPGDH | UGD UDP-glucose 6-dehydrogenase 4p15.1 DMG:Wockner_2014
PMID:cooccur
4487 MSX1 ECTD3 | HOX7 | HYD1 | STHAG1 msh homeobox 1 4p16.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
55752 SEPT11 - septin 11 4q21.1 CV:GWASdb
CV:PGCnp
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5530 PPP3CA CALN | CALNA | CALNA1 | CCN1 | CNA1 | PPP2B protein phosphatase 3 catalytic subunit alpha 4q24 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
56898 BDH2 DHRS6 | EFA6R | PRO20933 | SDR15C1 | UCPA-OR | UNQ6308 3-hydroxybutyrate dehydrogenase, type 2 4q24 CV:PGCnp
79071 ELOVL6 FACE | FAE | LCE ELOVL fatty acid elongase 6 4q25 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
839 CASP6 MCH2 caspase 6 4q25 CV:PGCnp
Network
Ascano FMRP targets
27068 PPA2 HSPC124 | SID6-306 pyrophosphatase (inorganic) 2 4q25 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
4258 MGST2 GST2 | MGST-II microsomal glutathione S-transferase 2 4q28.3 CV:PGCnp
6897 水手 ThrRS threonyl-tRNA synthetase 5p13.2 CV:PGCnp
PMID:cooccur
8546 AP3B1 ADTB3 | ADTB3A | HPS | HPS2 | PE adaptor related protein complex 3 beta 1 subunit 5q14.1 CV:PGCnp
DMG:Jaffe_2016
9456 HOMER1 HOMER | HOMER1A | HOMER1B | HOMER1C | SYN47 | Ves-1 homer scaffolding protein 1 5q14.2 CV:PGCnp
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
1495 CTNNA1 CAP102 catenin alpha 1 5q31.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
821 CANX CNX | IP90 | P90 calnexin 5q35 CV:PGCnp
DNM:Xu_2012
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
CompositeSet
387032 ZKSCAN4 P1P373C6 | ZNF307 | ZNF427 | ZSCAN36 zinc finger with KRAB and SCAN domains 4 6p21 CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3106 HLA-B AS | Bw-47 | Bw-50 | HLAB | SPDA1 major histocompatibility complex, class I, B 6p21.3 CV:GWASdb
CV:PGCnp
GSMA_I
Network
PMID:cooccur
3107 HLA-C D6S204 | HLA-JY3 | HLAC | HLC-C | PSORS1 major histocompatibility complex, class I, C 6p21.3 CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_I
Network
PMID:cooccur
CompositeSet
3133 HLA-E EA1.2 | EA2.1 | HLA-6.2 | MHC | QA1 major histocompatibility complex, class I, E 6p21.3 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3134 HLA-F CDA12 | HLA-5.4 | HLA-CDA12 | HLAF major histocompatibility complex, class I, F 6p21.3 CV:PGCnp
GSMA_I
PMID:cooccur
3135 HLA-G MHC-G major histocompatibility complex, class I, G 6p21.3 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
10384 BTN3A3 BTF3 | BTN3.3 butyrophilin subfamily 3 member A3 6p21.3 CV:PGCnp
GSMA_I
PMID:cooccur
3006 HIST1H1C H1.2 | H1C | H1F2 | H1s-1 histone cluster 1, H1c 6p21.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10866 HCP5 6S2650E | D6S2650E | P5-1 HLA complex P5 (non-protein coding) 6p21.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
6891 TAP2 ABC18 | ABCB3 | APT2 | D6S217E | PSF-2 | PSF2 | RING11 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) 6p21.3 CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
5696 PSMB8 ALDD | D6S216 | D6S216E | JMP | LMP7 | NKJO | PSMB5i | RING10 proteasome subunit beta 8 6p21.3 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
5698 PSMB9 LMP2 | PSMB6i | RING12 | beta1i proteasome subunit beta 9 6p21.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
3137 HLA-J CDA12 | D6S203 | HLA-59 | HLA-CDA12 major histocompatibility complex, class I, J (pseudogene) 6p21.31 PMID:cooccur
8334 HIST1H2AC H2A/l | H2AFL | dJ221C16.4 histone cluster 1, H2ac 6p22.1 CV:GWASdb
CV:PGCnp
GSMA_I
8343 HIST1H2BF H2B/g | H2BFG histone cluster 1, H2bf 6p22.2 CV:PGCnp
GSMA_I
8344 HIST1H2BE H2B.h | H2B/h | H2BFH | dJ221C16.8 histone cluster 1, H2be 6p22.2 CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
55856 ACOT13 HT012 | PNAS-27 | THEM2 acyl-CoA thioesterase 13 6p22.3 CV:PGCnp
GSMA_I
2162 F13A1 F13A coagulation factor XIII A chain 6p25.3-p24.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
60468 BACH2 BTBD25 BTB domain and CNC homolog 2 6q15 CV:PGCnp
5723 PSPH PSP | PSPHD phosphoserine phosphatase 7p11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
23333 DPY19L1 - dpy-19 like 1 (C. elegans) 7p14.2 CV:PGCnp
11097 NUPL2 CG1 | NLP-1 | NLP_1 | hCG1 nucleoporin like 2 7p15 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
54504 CPVL HVLP carboxypeptidase, vitellogenic like 7p15.1 CV:PGCnp
GO_Annotation
PMID:cooccur
3206 HOXA10 HOX1 | HOX1.8 | HOX1H | PL homeobox A10 7p15.2 DMG:Jaffe_2016
9734 HDAC9 HD7 | HD7b | HD9 | HDAC | HDAC7 | HDAC7B | HDAC9B | HDAC9FL | HDRP | MITR histone deacetylase 9 7p21.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
4521 NUDT1 MTH1 nudix hydrolase 1 7p22 CV:PGCnp
LK:YES
5445 PON2 - paraoxonase 2 7q21.3 CV:GWASdb
CV:PGCnp
7205 TRIP6 OIP-1 | OIP1 | TRIP-6 | TRIP6i2 | ZRP-1 thyroid hormone receptor interactor 6 7q22 CV:PGCnp
Network
26136 TES TESS | TESS-2 testin LIM domain protein 7q31.2 CV:PGCnp
PMID:cooccur
56829 ZC3HAV1 ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2 zinc finger CCCH-type containing, antiviral 1 7q34 CV:PGCnp
23471 TRAM1 PNAS8 | TRAM | TRAMP translocation associated membrane protein 1 8q13.3 CV:PGCnp
DMG:Wockner_2014
1666 DECR1 DECR | NADPH | SDR18C1 2,4-dienoyl-CoA reductase 1, mitochondrial 8q21.3 CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
23167 EFR3A - EFR3 homolog A 8q24.22 CV:PGCnp
DMG:Jaffe_2016
65265 C8orf33 - chromosome 8 open reading frame 33 8q24.3 DMG:Jaffe_2016
1936 EEF1D EF-1D | EF1D | FP1047 eukaryotic translation elongation factor 1 delta 8q24.3 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
CompositeSet
7264 TSTA3 FX | P35B | SDR4E1 tissue specific transplantation antigen P35B 8q24.3 CV:PGCnp
6132 RPL8 L8 ribosomal protein L8 8q24.3 CV:PGCnp
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
79792 GSDMD DF5L | DFNA5L | FKSG10 | GSDMDC1 gasdermin D 8q24.3 CV:PGCnp
304 ANXA2P2 ANX2L2 | ANX2P2 | LPC2B annexin A2 pseudogene 2 9p13 CV:PGCnp
55958 KLHL9 - kelch like family member 9 9p22 CV:PGCnp
DMG:Jaffe_2016
7088 TLE1 ESG | ESG1 | GRG1 transducin like enhancer of split 1 9q21.32 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
23424 TDRD7 CATC4 | PCTAIRE2BP | TRAP tudor domain containing 7 9q22.33 CV:PGCnp
DMG:Wockner_2014
8019 BRD3 ORFX | RING3L bromodomain containing 3 9q34 CV:PGCnp
DMG:Wockner_2014
266655 LINC00094 LP2477 | NCRNA00094 | bA374P20.3 long intergenic non-protein coding RNA 94 9q34 CV:PGCnp
25 ABL1 ABL | JTK7 | bcr/abl | c-ABL | c-ABL1 | p150 | v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase 9q34.1 CV:PGCnp
Network
Ascano FMRP targets
7504 XK KX | MCLDS | NA | NAC | X1k | XKR1 X-linked Kx blood group Xp21.1 CV:PGCnp
PMID:cooccur


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