Search results: The pahtwayp1350has 481 genes in the original annotation. Currently, there are 290 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

因为基因页面包含很多信息;n, it takes on average 3-5 seconds to load. So when you click a gene ID, please be patient for the page to load.

Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
100505881 MAGI2-AS3 - MAGI2 antisense RNA 3 - CV:PGCnp
6840 SVIL - supervillin 10p11.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
8516 ITGA8 - integrin subunit alpha 8 10p13 CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
10133 OPTN ALS12 | FIP2 | GLC1E | HIP7 | HYPL | NRP | TFIIIA-INTP optineurin 10p13 CV:PGCnp
DMG:Nishioka_2013
2625 GATA3 HDR | HDRS GATA binding protein 3 10p15 CV:PGCnp
DEG:Maycox_2009
DMG: Jaffe_2016
7414 VCL CMD1W | CMH15 | HEL114 | MV | MVCL vinculin 10q22.2 CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
3778 KCNMA1 BKTM | KCa1.1 | MaxiK | SAKCA | SLO | SLO-ALPHA | SLO1 | bA205K10.1 | mSLO1 potassium calcium-activated channel subfamily M alpha 1 10q22.3 CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
59 ACTA2 AAT6 | ACTSA | MYMY5 actin, alpha 2, smooth muscle, aorta 10q23.3 CV:PGCnp
DMG: Jaffe_2016
DNM:Fromer_2014
CompositeSet
5950 RBP4 MCOPCB10 | RDCCAS retinol binding protein 4 10q23.33 CV:PGCnp
PMID:cooccur
10580 SORBS1 CAP | FLAF2 | R85FL | SH3D5 | SH3P12 | SORB1 sorbin and SH3 domain containing 1 10q23.33 CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
26509 MYOF FER1L3 myoferlin 10q24 CV:PGCnp
DNM:Fromer_2014
CompositeSet
9644 SH3PXD2A FISH | SH3MD1 | TKS5 SH3 and PX domains 2A 10q24.33 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Ascano FMRP targets
6571 SLC18A2 SVAT | SVMT | VAT2 | VMAT2 solute carrier family 18 member A2 10q25 ADT:Sun_2012
Association
CV:PGCnp
DNM:Gulsuner_2013
GR_Ng
PMID:cooccur
NEUROTRANSMITTER METABOLISM
2263 FGFR2 BBDS | BEK | BFR-1 | CD332 | CEK3 | CFD1 | ECT1 | JWS | K-SAM | KGFR | TK14 | TK25 fibroblast growth factor receptor 2 10q26 CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
2869 GRK5 GPRK5 G protein-coupled receptor kinase 5 10q26.11 CV:PGCnp
DMG: Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
90139 TSPAN18 TSPAN tetraspanin 18 11p11.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1643 DDB2 DDBB | UV-DDB2 | XPE damage specific DNA binding protein 2 11p11.2 CV:PGCnp
26298 EHF ESE3 | ESE3B | ESEJ ETS homologous factor 11p12 CV:GWAScat
CV:PGCnp
PMID:cooccur
10335 MRVI1 IRAG | JAW1L murine retrovirus integration site 1 homolog 11p15 CV:GWAScat
CV:GWASdb
CV:PGCnp
6764 ST5 DENND2B | HTS1 | p126 suppression of tumorigenicity 5 11p15 CV:PGCnp
DMG:Wockner_2014
89797 NAV2 HELAD1 | POMFIL2 | RAINB1 | STEERIN2 | UNC53H2 neuron navigator 2 11p15.1 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
10418 SPON1 VSGP/F-spondin | f-spondin spondin 1 11p15.2 CV:GWASdb
CV:PGCnp
PMID:cooccur
27122 DKK3 REIC | RIG dickkopf WNT signaling pathway inhibitor 3 11p15.2 CV:PGCnp
PMID:cooccur
7275 TUB RDOB | rd5 tubby bipartite transcription factor 11p15.5 CV:PGCnp
DNM:Xu_2012
CompositeSet
3992 FADS1 D5D | FADS6 | FADSD5 | LLCDL1 | TU12 fatty acid desaturase 1 11q12.2-q13.1 DEG:Sanders_2013
PMID:cooccur
57124 CD248 CD164L1 | TEM1 CD248 molecule 11q13 CV:PGCnp
DMG:Wockner_2014
2950 GSTP1 DFN7 | FAEES3 | GST3 | GSTP | HEL-S-22 | PI glutathione S-transferase pi 1 11q13 CV:PGCnp
GO_Annotation
PMID:cooccur
CELL METABOLISM
116535 MRGPRF GPR140 | GPR168 | MRGF | RTA MAS related GPR family member F 11q13.3 CV:PGCnp
55107 ANO1 DOG1 | ORAOV2 | TAOS2 | TMEM16A anoctamin 1 11q13.3 CV:PGCnp
DMG:Wockner_2014
11098 PRSS23 SIG13 | SPUVE | ZSIG13 protease, serine 23 11q14.1 CV:GWASdb
CV:PGCnp
GO_Annotation
5241 PGR NR3C3 | PR progesterone receptor 11q22-q23 CV:PGCnp
DMG: Jaffe_2016
PMID:cooccur
834 CASP1 ICE | IL1BC | P45 caspase 1 11q23 DEG:Sanders_2013
GSMA_I
Network
4684 NCAM1 CD56 | MSK39 | NCAM neural cell adhesion molecule 1 11q23.1 CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6876 TAGLN SM22 | SMCC | TAGLN1 | WS3-10 transgelin 11q23.2 GSMA_I
4162 MCAM CD146 | MUC18 melanoma cell adhesion molecule 11q23.3 CV:PGCnp
DMG:Wockner_2014
GSMA_I
53826 FXYD6 - FXYD domain containing ion transport regulator 6 11q23.3 Association
CV:PGCnp
DMG:Wockner_2014
GR_WM
GSMA_I
PMID:cooccur
10205 MPZL2 EVA | EVA1 myelin protein zero like 2 11q24 CV:PGCnp
GSMA_I
399959 MIR100HG AGD1 | lncRNA-N2 mir - 100 -让- 7 - 2集群主机基因 11q24.1 CV:GWASdb
CV:PGCnp
9638 FEZ1 UNC-76 fasciculation and elongation protein zeta 1 11q24.2 Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
8082 SSPN DAGA5 | KRAG | NSPN | SPN1 | SPN2 sarcospan 12p11.2 CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
3764 KCNJ8 KIR6.1 | uKATP-1 potassium voltage-gated channel subfamily J member 8 12p11.23 CV:PGCnp
DMG:vanEijk_2014
Expression
EXCITABILITY
715 C1R - complement C1r subcomponent 12p13 CV:PGCnp
GO_Annotation
2026 ENO2 HEL-S-279 | NSE enolase 2 (gamma, neuronal) 12p13 PMID:cooccur CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
894 CCND2 KIAK0002 | MPPH3 cyclin D2 12p13 CV:PGCnp
DMG: Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
57494 RIMKLB FAM80B | NAAGS | NAAGS-I ribosomal modification protein rimK-like family member B 12p13.31 CV:GWASdb
CV:PGCnp
25840 METTL7A AAM-B methyltransferase like 7A 12q13.12 CV:PGCnp
DEG:Zhao_2015
Expression
3855 KRT7 CK7 | K2C7 | K7 | SCL keratin 7 12q13.13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
22822 PHLDA1 DT1P1B11 | PHRIP | TDAG51 pleckstrin homology like domain family A member 1 12q15 CV:GWASdb
CV:PGCnp
PMID:cooccur
1466 CSRP2 CRP2 | LMO5 | SmLIM cysteine and glycine rich protein 2 12q21.1 CV:PGCnp
DMG:Wockner_2014
59277 NTN4 PRO3091 netrin 4 12q22 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
387882 C12orf75 AGD3 | OCC-1 | OCC1 chromosome 12 open reading frame 75 12q23.3 CV:GWASdb
CV:PGCnp
23603 CORO1C HCRNN4 coronin 1C 12q24.1 CV:PGCnp
DMG: Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
32 ACACB ACC2 | ACCB | HACC275 acetyl-CoA carboxylase beta 12q24.11 CV:PGCnp
DMG:Wockner_2014
217 ALDH2 ALDH-E2 | ALDHI | ALDM aldehyde dehydrogenase 2 family (mitochondrial) 12q24.2 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
CompositeSet
26353 HSPB8 CMT2L | DHMN2 | E2IG1 | H11 | HMN2 | HMN2A | HSP22 heat shock protein family B (small) member 8 12q24.23 CV:PGCnp
7223 TRPC4 HTRP-4 | HTRP4 | TRP4 transient receptor potential cation channel subfamily C member 4 13q13.3 CV:PGCnp
5101 PCDH9 - protocadherin 9 13q21.32 CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
CompositeSet
Darnell FMRP targets
10082 GPC6 OMIMD1 glypican 6 13q32 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
1282 COL4A1 BSVD | RATOR collagen type IV alpha 1 13q34 CV:GWASdb
CV:PGCnp
1284 COL4A2 ICH | POREN2 collagen type IV alpha 2 13q34 CV:GWAScat
CV:GWASdb
CV:PGCnp
10278 EFS CAS3 | CASS3 | EFS1 | EFS2 | HEFS | SIN embryonal Fyn-associated substrate 14q11.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
1690 COCH COCH-5B2 | COCH5B2 | DFNA9 cochlin 14q11.2-q13 CV:PGCnp
DEG:Sanders_2013
GSMA_I
1073 CFL2 NEM7 cofilin 2 14q12 CV:GWASdb
CV:PGCnp
122525 C14orf28 DRIP-1 | DRIP1 | c14_5270 chromosome 14 open reading frame 28 14q21.2 CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
10979 FERMT2 KIND2 | MIG2 | PLEKHC1 | UNC112 | UNC112B | mig-2 fermitin family member 2 14q22.1 CV:PGCnp
DMG:Wockner_2014
Expression
122786 FRMD6 C14orf31 | EX1 | Willin | c14_5320 FERM domain containing 6 14q22.1 CV:PGCnp
7043 TGFB3 ARVD | ARVD1 | LDS5 | RNHF | TGF-beta3 transforming growth factor beta 3 14q24 CV:PGCnp
2877 GPX2 GI-GPx | GPRP | GPRP-2 | GPx-2 | GPx-GI | GSHPX-GI | GSHPx-2 glutathione peroxidase 2 14q24.1 PMID:cooccur
64093 SMOC1 OAS SPARC related modular calcium binding 1 14q24.2 CV:PGCnp
DMG: Jaffe_2016
5228 PGF D12S1900 | PGFL | PLGF | PlGF-2 | SHGC-10760 placental growth factor 14q24.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55384 MEG3 FP504 | GTL2 | LINC00023 | NCRNA00023 | PRO0518 | PRO2160 | onco-lncRNA-83 | prebp1 maternally expressed 3 (non-protein coding) 14q32 CV:PGCnp
DMG:Wockner_2014
Expression
5104 SERPINA5 PAI-3 | PAI3 | PCI | PCI-B | PLANH3 | PROCI serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 14q32.1 CV:PGCnp
DNM:McCarthy_2014
Expression
145270 PRIMA1 PRIMA proline rich membrane anchor 1 14q32.12 CV:PGCnp
DMG: Jaffe_2016
GO_Annotation
PMID:cooccur
113146 AHNAK2 C14orf78 AHNAK nucleoprotein 2 14q32.33 CV:PGCnp
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
254531 LPCAT4 AGPAT7 | AYTL3 | LPAAT-eta | LPEAT2 lysophosphatidylcholine acyltransferase 4 15q14 CV:PGCnp
DMG:vanEijk_2014
2628 GATM AGAT | AT | CCDS3 glycine amidinotransferase 15q21.1 DMG:Wockner_2014
80031 SEMA6D - semaphorin 6D 15q21.1 CV:PGCnp
GO_Annotation
2200 FBN1 ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2 fibrillin 1 15q21.1 CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
145781 GCOM1 GRINL1A | Gcom2 | MYZAP | MYZAP-POLR2M | gcom GRINL1A complex locus 1 15q21.3 CV:GWAScat
CV:PGCnp
302 ANXA2 ANX2 | ANX2L4 | CAL1H | HEL-S-270 | LIP2 | LPC2 | LPC2D | P36 | PAP-IV annexin A2 15q22.2 CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
348094 ANKDD1A - ankyrin repeat and death domain containing 1A 15q22.31 CV:PGCnp
DMG: Jaffe_2016
DMG:Wockner_2014
56965 PARP6 ARTD17 | PARP-6-B1 | PARP-6-C | pART17 poly(ADP-ribose) polymerase family member 6 15q23 CV:PGCnp
DMG: Jaffe_2016
DMG:Wockner_2014
1381 CRABP1 CRABP | CRABP-I | CRABPI | RBP5 cellular retinoic acid binding protein 1 15q24 CV:PGCnp
79748 LMAN1L ERGIC-53L | ERGL lectin, mannose binding 1 like 15q24.1 CV:PGCnp
28232 SLCO3A1 OATP-D | OATP3A1 | OATPD | SLC21A11 solute carrier organic anion transporter family member 3A1 15q26 CV:GWAScat
CV:PGCnp
PMID:cooccur
112476 PRRT2 BFIC2 | BFIS2 | DSPB3 | DYT10 | EKD1 | FICCA | ICCA | IFITMD1 | PKC proline rich transmembrane protein 2 16p11.2 CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
7041 TGFB1I1 ARA55 | HIC-5 | HIC5 | TSC-5 transforming growth factor beta 1 induced transcript 1 16p11.2 CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
27327 TNRC6A CAGH26 | GW1 | GW182 | TNRC6 trinucleotide repeat containing 6A 16p11.2 CV:PGCnp
GSMA_IIE
29904 EEF2K HSU93850 | eEF-2K eukaryotic elongation factor 2 kinase 16p12.2 CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
CompositeSet
4629 MYH11 AAT4 | FAA4 | SMHC | SMMHC 肌凝蛋白重链11,光滑的音乐le 16p13.11 CNV:YES
CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
115 ADCY9 AC9 | ACIX adenylate cyclase 9 16p13.3 CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
INTRACELLULAR SIGNAL TRANSDUCTION
6376 CX3CL1 ABCD-3 | C3Xkine | CXC3 | CXC3C | NTN | NTT | SCYD1 | fractalkine | neurotactin C-X3-C motif chemokine ligand 1 16q13 CV:PGCnp
PMID:cooccur
51090 PLLP PMLP | TM4SF11 plasmolipin 16q13 CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
3931 LCAT - lecithin-cholesterol acyltransferase 16q22.1 CV:PGCnp
2294 FOXF1 ACDMPV | FKHL5 | FREAC1 forkhead box F1 16q24 DMG: Jaffe_2016
23174 ZCCHC14 BDG-29 | BDG29 zinc finger CCHC-type containing 14 16q24.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
58189 WFDC1 PS20 WAP four-disulfide core domain 1 16q24.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
55244 SLC47A1 MATE1 solute carrier family 47 member 1 17p11.2 CV:PGCnp
DMG:Wockner_2014
224 ALDH3A2 ALDH10 | FALDH | SLS aldehyde dehydrogenase 3 family member A2 17p11.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5376 PMP22 CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110 peripheral myelin protein 22 17p12 CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
5176 SERPINF1 EPC-1 | OI12 | OI6 | PEDF | PIG35 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 17p13.3 CV:PGCnp
GO_Annotation
84951 TNS4 CTEN | PP14434 tensin 4 17q21.2 CV:PGCnp
3866 KRT15 CK15 | K15 | K1CO keratin 15 17q21.2 CV:PGCnp
DNM:Fromer_2014
CompositeSet
284119 PTRF CAVIN | CAVIN1 | CGL4 | FKSG13 | cavin-1 polymerase I and transcript release factor 17q21.2 CV:PGCnp
DMG:Wockner_2014
10052 GJC1 CX45 | GJA7 gap junction protein gamma 1 17q21.31 CV:PGCnp
GO_Annotation
8714 ABCC3 ABC31 | EST90757 | MLP2 | MOAT-D | MRP3 | cMOAT2 ATP binding cassette subfamily C member 3 17q22 CV:PGCnp
DNM:McCarthy_2014
9902 MRC2 CD280 | CLEC13E | ENDO180 | UPARAP mannose receptor, C type 2 17q23.2 CV:PGCnp
DNM:Fromer_2014
CompositeSet
7077 TIMP2 CSC-21K | DDC8 TIMP metallopeptidase inhibitor 2 17q25 CV:PGCnp
DMG:vanEijk_2014
DNM:Guipponi_2014
GO_Annotation
Network
PMID:cooccur
439921 MXRA7 PS1TP1 | TMAP1 matrix-remodelling associated 7 17q25.1 CV:PGCnp
DMG:Wockner_2014
114897 C1QTNF1 CTRP1 | GIP | ZSIG37 C1q and tumor necrosis factor related protein 1 17q25.3 CV:PGCnp
84617 TUBB6 HsT1601 | TUBB-5 tubulin beta 6 class V 18p11.21 CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_TAP-PSD-95-CORE
2774 GNAL DYT25 G protein subunit alpha L 18p11.22-p11.21 Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23136 EPB41L3 4.1B | DAL-1 | DAL1 erythrocyte membrane protein band 4.1-like 3 18p11.32 CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
80206 FHOD3 FHOS2 | Formactin2 formin homology 2 domain containing 3 18问12 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
Ascano FMRP targets
1837 DTNA D18S892E | DRP3 | DTN | DTN-A | LVNC1 dystrobrevin alpha 18问12 CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1825 DSC3 CDHF3 | DSC | DSC1 | DSC2 | DSC4 | HT-CP desmocollin 3 18问12.1 CV:PGCnp
596 BCL2 bcl - 2 | PPP1R50 B-cell CLL/lymphoma 2 18问21.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
51477 ISYNA1 INO1 | INOS | IPS | IPS 1 | IPS-1 inositol-3-phosphate synthase 1 19p13.11 CV:PGCnp
5141 PDE4A DPDE2 | PDE4 | PDE46 phosphodiesterase 4A 19p13.2 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1675 CFD ADIPSIN | ADN | DF | PFD complement factor D (adipsin) 19p13.3 CV:PGCnp
GO_Annotation
PMID:cooccur
8857 FCGBP FC(GAMMA)BP Fc fragment of IgG binding protein 19q13.1 CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
4680 CEACAM6 CD66c | CEAL | NCA carcinoembryonic antigen related cell adhesion molecule 6 19q13.2 CV:PGCnp
PMID:cooccur
2944 GSTM1 GST1 | GSTM1-1 | GSTM1a-1a | GSTM1b-1b | GTH4 | GTM1 | H-B | MU | MU-1 glutathione S-transferase mu 1 1p13.3 Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
10451 VAV3 - vav guanine nucleotide exchange factor 3 1p13.3 CV:GWASdb
CV:PGCnp
DMG: Jaffe_2016
PMID:cooccur
5906 RAP1A C21KG | G-22K | KREV-1 | KREV1 | RAP1 | SMGP21 RAP1A, member of RAS oncogene family 1p13.3 CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1952 CELSR2 ADGRC2 | CDHF10 | EGFL2 | Flamingo1 | MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 1p21 CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
51375 SNX7 - sorting nexin 7 1p21.3 CV:PGCnp
DMG: Jaffe_2016
PMID:cooccur
2634 GBP2 - guanylate binding protein 2 1p22.2 CV:PGCnp
DEG:Sanders_2013
91624 NEXN CMH20 | NELIN nexilin (F actin binding protein) 1p31.1 CV:PGCnp
GSMA_IIA
55225 RAVER2 - ribonucleoprotein, PTB-binding 2 1p31.3 CV:GWASdb
CV:PGCnp
GSMA_IIA
57685 CACHD1 - cache domain containing 1 1p31.3 CV:GWASdb
CV:PGCnp
GSMA_IIA
Ascano FMRP targets
1580 CYP4B1 CYPIVB1 | P-450HP cytochrome P450 family 4 subfamily B member 1 1p33 CV:GWASdb
CV:PGCnp
7049 TGFBR3 BGCAN | betaglycan transforming growth factor beta receptor III 1p33-p32 CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
84879 MFSD2A MCPH15 | MFSD2 | NLS1 major facilitator superfamily domain containing 2A 1p34.2 CV:GWASdb
CV:PGCnp
399474 TMEM200B TTMB transmembrane protein 200B 1p35 CV:PGCnp
64766 S100PBP S100PBPR S100P binding protein 1p35.1 CV:PGCnp
1969 EPHA2 ARCC2 | CTPA | CTPP1 | CTRCT6 | ECK EPH receptor A2 1p36 CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
3339 HSPG2 HSPG | PLC | PRCAN | SJA | SJS | SJS1 heparan sulfate proteoglycan 2 1p36.1-p34 CV:PGCnp
DNM:Ambalavanan_2016
PMID:cooccur
26232 FBXO2 FBG1 | FBX2 | Fbs1 | NFB42 | OCP1 F-box protein 2 1p36.22 CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
8863 PER3 GIG13 period circadian clock 3 1p36.23 Association
CV:PGCnp
PMID:cooccur
1805 DPT TRAMP dermatopontin 1q12-q23 CV:PGCnp
PMID:cooccur
6277 S100A6 2A9 | 5B10 | CABP | CACY | PRA S100 calcium binding protein A6 1q21 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
148741 ANKRD35 - ankyrin repeat domain 35 1q21.1 CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
55243 KIRREL NEPH1 kin of IRRE like (Drosophila) 1q23.1 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
477 ATP1A2 FHM2 | MHP2 ATPase Na+/K+ transporting subunit alpha 2 1q23.2 CV:GWAScat
CV:PGCnp
GSMA_I
GSMA_IIA
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
57216 VANGL2 LPP1 | LTAP | STB1 | STBM | STBM1 VANGL planar cell polarity protein 2 1q23.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
4921 DDR2 MIG20a | NTRKR3 | TKT | TYRO10 discoidin domain receptor tyrosine kinase 2 1q23.3 CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
5396 PRRX1 AGOTC | PHOX1 | PMX1 | PRX-1 | PRX1 paired related homeobox 1 1q24 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
5549 PRELP MST161 | MSTP161 | SLRR2A proline/arginine-rich end leucine-rich repeat protein 1q32 CV:GWASdb
CV:PGCnp
7188 TRAF5 MGC:39780 | RNF84 TNF receptor associated factor 5 1q32 CV:PGCnp
DMG:Wockner_2014
493 ATP2B4 ATP2B2 | MXRA1 | PMCA4 | PMCA4b | PMCA4x ATPase plasma membrane Ca2+ transporting 4 1q32.1 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Awadalla_2010
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
4660 PPP1R12B MYPT2 | PP1bp55 protein phosphatase 1 regulatory subunit 12B 1q32.1 CV:PGCnp
DMG: Jaffe_2016
1130 LYST CHS | CHS1 lysosomal trafficking regulator 1q42.1-q42.2 CV:PGCnp
DMG:Wockner_2014
55740 ENAH ENA | MENA | NDPP1 enabled homolog (Drosophila) 1q42.12 CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
4811 NID1 NID nidogen 1 1q43 CV:GWASdb
CV:PGCnp
83959 SLC4A11 BTR1 | CDPD1 | CHED2 | NABC1 | dJ794I6.2 solute carrier family 4 member 11 20p12 CV:PGCnp
DMG:Wockner_2014
57419 SLC24A3 NCKX3 solute carrier family 24 member 3 20p13 CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
25943 C20orf194 - chromosome 20 open reading frame 194 20p13 CV:PGCnp
Expression
81610 FAM83D C20orf129 | CHICA | dJ616B8.3 family with sequence similarity 83 member D 20q11.23 CV:PGCnp
10950 BTG3 ANA | TOB5 | TOB55 | TOFA BTG family member 3 21q21.1 CV:PGCnp
DMG: Jaffe_2016
11096 ADAMTS5 ADAM-TS 11 | ADAM-TS 5 | ADAM-TS5 | ADAMTS-11 | ADAMTS-5 | ADAMTS11 | ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 21q21.3 CV:PGCnp
DMG: Jaffe_2016
54102 CLIC6 CLIC1L chloride intracellular channel 6 21q22.12 CV:PGCnp
DMG:Nishioka_2013
Network
2114 ETS2 ETS2IT1 ETS proto-oncogene 2, transcription factor 21q22.2 CV:PGCnp
DEG:Zhao_2015
23331 TTC28 TPRBK tetratricopeptide repeat domain 28 22q12.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
4744 NEFH NFH neurofilament, heavy polypeptide 22q12.2 CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7078 TIMP3 HSMRK222 | K222 | K222TA2 | SFD TIMP metallopeptidase inhibitor 3 22q12.3 Association
CV:PGCnp
GSMA_I
9145 SYNGR1 - synaptogyrin 1 22q13.1 Association
CV:PGCnp
GR_COR
GR_WM
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
64781 CERK LK4 | dA59H18.2 | dA59H18.3 | hCERK ceramide kinase 22q13.31 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Expression
CompositeSet
388969 C2orf68 HCRCN81 chromosome 2 open reading frame 68 2p11.2 CV:PGCnp
DEG:Zhao_2015
822 CAPG AFCP | HEL-S-66 | MCP capping actin protein, gelsolin like 2p11.2 CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
4211 MEIS1 - Meis homeobox 1 2p14 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
25927 CNRIP1 C2orf32 | CRIP1 cannabinoid receptor interacting protein 1 2p14 CV:PGCnp
DMG: Jaffe_2016
DMG:Wockner_2014
GPCR SIGNALLING
9736 USP34 - ubiquitin specific peptidase 34 2p15 CV:PGCnp
Expression
CompositeSet
Darnell FMRP targets
2202 EFEMP1 DHRD | DRAD | FBLN3 | FBNL | FIBL-3 | MLVT | MTLV | S1-5 EGF containing fibulin-like extracellular matrix protein 1 2p16 CV:PGCnp
PMID:cooccur
51232 CRIM1 CRIM-1 | S52 cysteine rich transmembrane BMP regulator 1 (chordin-like) 2p21 CV:PGCnp
GO_Annotation
130271 PLEKHH2 PLEKHH1L pleckstrin homology, MyTH4 and FERM domain containing H2 2p21 CV:PGCnp
DNM:McCarthy_2014
10602 CDC42EP3 BORG2 | CEP3 | UB1 CDC42 effector protein 3 2p21 CV:GWASdb
CV:PGCnp
PMID:cooccur
2034 EPAS1 ECYT4 | HIF2A | HLF | MOP2 | PASD2 | bHLHe73 endothelial PAS domain protein 1 2p21-p16 CV:PGCnp
DMG: Jaffe_2016
DMG:Wockner_2014
6716 SRD5A2 - steroid 5 alpha-reductase 2 2p23 CV:PGCnp
PMID:cooccur
79745 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 2p23.2 CV:PGCnp
PMID:cooccur
6382 SDC1 CD138 | SDC | SYND1 | syndecan syndecan 1 2p24.1 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
114818 KLHL29 KBTBD9 kelch like family member 29 2p24.1 CV:PGCnp
29841 GRHL1 LBP32 | MGR | NH32 | TFCP2L2 grainyhead like transcription factor 1 2p25.1 CV:PGCnp
Expression
84417 C2orf40 ECRG4 chromosome 2 open reading frame 40 2q12.2 CV:PGCnp
GSMA_I
GSMA_IIA
29842 TFCP2L1 CRTR1 | LBP-9 | LBP9 transcription factor CP2-like 1 2q14 CV:PGCnp
DNM:McCarthy_2014
Expression
GSMA_I
GSMA_IIA
8604 SLC25A12 AGC1 | ARALAR solute carrier family 25 member 12 2q24 CV:PGCnp
DMG: Jaffe_2016
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
3760 KCNJ3 GIRK1 | KGA | KIR3.1 potassium voltage-gated channel subfamily J member 3 2q24.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
CANABINOID
EXCITABILITY
SEROTONIN
5937 RBMS1 C2orf12 | HCC-4 | MSSP | MSSP-1 | MSSP-2 | MSSP-3 | SCR2 | YC1 RNA binding motif, single stranded interacting protein 1 2q24.2 CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
3236 HOXD10 HOX4 | HOX4D | HOX4E | Hox-4.4 homeobox D10 2 q31.1 CV:PGCnp
3239 HOXD13 BDE | BDSD | HOX4I | SPD homeobox D13 2 q31.1 CV:PGCnp
151556 GPR155 DEP.7 | DEPDC3 | PGR22 G protein-coupled receptor 155 2 q31.1 CV:PGCnp
DMG:Wockner_2014
5334 PLCL1 PLCE | PLCL | PLDL1 | PPP1R127 | PRIP phospholipase C like 1 2q33 CV:PGCnp
DMG: Jaffe_2016
65062 TMEM237 ALS2CR4 | JBTS14 transmembrane protein 237 2q33.2 CV:PGCnp
DMG: Jaffe_2016
10290 SPEG APEG-1 | APEG1 | BPEG | CNM5 | SPEGalpha | SPEGbeta SPEG complex locus 2q35 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
7145 TNS1 MST091 | MST122 | MST127 | MSTP091 | MSTP122 | MSTP127 | MXRA6 | PPP1R155 | TNS tensin 1 2q35-q36 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
151473 SLC16A14 MCT14 solute carrier family 16 member 14 2q36.3 CV:PGCnp
DMG:Wockner_2014
6091 ROBO1 DUTT1 | SAX3 roundabout guidance receptor 1 3p12 CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Ascano FMRP targets
166336 PRICKLE2 EPM5 prickle planar cell polarity protein 2 3p14.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
7318 UBA7 D8 | UBA1B | UBE1L | UBE2 ubiquitin like modifier activating enzyme 7 3p21 CV:PGCnp
3913 LAMB2 LAMS | NPHS5 laminin subunit beta 2 3p21 CV:PGCnp
GO_Annotation
1294 COL7A1 EBD1 | EBDCT | EBR1 | NDNC8 collagen type VII alpha 1 3p21.1 CV:PGCnp
7871 SLMAP SLAP sarcolemma associated protein 3p21.2-p14.3 CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanNRC
3680 ITGA9 ALPHA-RLC | ITGA4L | RLC integrin subunit alpha 9 3p21.3 CV:PGCnp
GSMA_I
92999 ZBTB47 ZNF651 zinc finger and BTB domain containing 47 3p22.1 CV:PGCnp
DMG:Wockner_2014
885 CCK - cholecystokinin 3p22.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
23171 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1-like 3p22.3 CV:PGCnp
GSMA_I
6533 SLC6A6 TAUT solute carrier family 6 member 6 3p25.1 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_I
CELL METABOLISM
152273 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 3p25.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
4045 LSAMP IGLON3 | LAMP limbic system-associated membrane protein 3q13.31 CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
22808 MRAS M-RAs | R-RAS3 | RRAS3 muscle RAS oncogene homolog 3q22.3 CV:PGCnp INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
5947 RBP1 CRABP-I | CRBP | CRBP1 | CRBPI | RBPC retinol binding protein 1 3q23 Association
PMID:cooccur
4311 MME CALLA | CD10 | NEP | SFE membrane metallo-endopeptidase 3q25.2 CV:PGCnp
DMG: Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
2122 MECOM AML1-EVI-1 | EVI1 | MDS1 | MDS1-EVI1 | PRDM3 | RUSAT2 MDS1 and EVI1 complex locus 3q26.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5648 MASP1 3MC1 | CRARF | CRARF1 | MAP1 | MASP | MASP3 | MAp44 | PRSS5 | RaRF mannan binding lectin serine peptidase 1 3q27-q28 CV:GWASdb
CV:PGCnp
GO_Annotation
8626 TP63 AIS | B(p51A) | B(p51B) | EEC3 | KET | LMS | NBP | OFC8 | RHS | SHFM4 | TP53CP | TP53L | TP73L | p40 | p51 | p53CP | p63 | p73H | p73L tumor protein p63 3q28 CV:PGCnp
CV:PheWAS
Network
152137 CCDC50 C3orf6 | DFNA44 | YMER coiled-coil domain containing 50 3q28 CV:PGCnp
23216 TBC1D1 TBC | TBC1 TBC1 domain family member 1 4p14 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
5099 PCDH7 BH-Pcdh | BHPCDH | PPP1R120 protocadherin 7 4p15 CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7466 WFS1 CTRCT41 | WFRS | WFS | WFSL wolframin ER transmembrane glycoprotein 4p16.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
3815 KIT C-Kit | CD117 | PBT | SCFR KIT proto-oncogene receptor tyrosine kinase 4q12 CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
5311 PKD2 APKD2 | PC2 | PKD4 | Pc-2 | TRPP2 polycystin 2, transient receptor potential cation channel 4q22.1 CV:PGCnp
CV:PheWAS
56898 BDH2 DHRS6 | EFA6R | PRO20933 | SDR15C1 |加州大学PA-OR | UNQ6308 3-hydroxybutyrate dehydrogenase, type 2 4q24 CV:PGCnp
287 ANK2 ANK-2 | LQT4 | brank-2 ankyrin 2, neuronal 4q25-q27 CV:GWASdb
CV:PGCnp
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
4306 NR3C2 MCR | MLR | MR | NR3C2VIT nuclear receptor subfamily 3 group C member 2 4q31.1 CV:GWASdb
CV:PGCnp
DMG: Jaffe_2016
PMID:cooccur
152485 ZNF827 - zinc finger protein 827 4q31.22 CV:PGCnp
DMG:vanEijk_2014
Darnell FMRP targets
85462 FHDC1 - FH2 domain containing 1 4q31.3 CV:PGCnp
CV:PheWAS
56034 PDGFC FALLOTEIN | SCDGF platelet derived growth factor C 4q32 CV:PGCnp
DMG: Jaffe_2016
23022 PALLD CGI-151 | CGI151 | MYN | PNCA1 | SIH002 palladin, cytoskeletal associated protein 4q32.3 CV:GWAScat
CV:PGCnp
Expression
PMID:cooccur
11341 SCRG1 SCRG-1 stimulator of chondrogenesis 1 4q34.1 CV:PGCnp
GO_Annotation
PMID:cooccur
56977 STOX2 - storkhead box 2 4q35.1 CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
23530 NNT GCCD4 nicotinamide nucleotide transhydrogenase 5p12 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
134111 UBE2QL1 - ubiquitin conjugating enzyme E2 Q family like 1 5p15.31 CV:GWASdb
CV:PGCnp
3673 ITGA2 BR | CD49B | GPIa | HPA-5 | VLA-2 | VLAA2 integrin subunit alpha 2 5q11.2 CV:PGCnp
DMG: Jaffe_2016
DMG:Montano_2016
Ascano FMRP targets
4131 MAP1B FUTSCH | MAP5 | PPP1R102 microtubule associated protein 1B 5q13 CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5295 PIK3R1 AGM7 | GRB1 | IMD36 | p85 | p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 5q13.1 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
PMID:cooccur
134429 STARD4 - StAR related lipid transfer domain containing 4 5q22.1 CV:PGCnp
DMG:Wockner_2014
Expression
5480 PPIC CYPC peptidylprolyl isomerase C 5q23.2 CV:PGCnp
PMID:cooccur
1809 DPYSL3 CRMP-4 | CRMP4 | DRP-3 | DRP3 | LCRMP | ULIP | ULIP-1 dihydropyrimidinase like 3 5q32 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
55568 GALNT10 GALNACT10 | PPGALNACT10 | PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 5q33.2 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
7422 VEGFA MVCD1 | VEGF | VPF vascular endothelial growth factor A 6p12 CV:PGCnp
DEG:Maycox_2009
GO_Annotation
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
667 DST BP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2 dystonin 6p12.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2938 GSTA1 GST-epsilon | GST2 | GSTA1-1 | GTH1 glutathione S-transferase alpha 1 6p12.1 CV:PGCnp
Expression
GSMA_IIE
PMID:cooccur
3133 HLA-E EA1.2 | EA2.1 | HLA-6.2 | MHC | QA1 major histocompatibility complex, class I, E 6p21.3 CV:GWASdb
CV:PGCnp
DMG: Jaffe_2016
GSMA_I
7754 ZNF204P ZNF184-Lp | ZNF204 | ZNF315P | b24o18.1 zinc finger protein 204, pseudogene 6p21.3 CV:PGCnp
11120 BTN2A1 BK14H9.1 | BT2.1 | BTF1 | BTN2.1 | DJ3E1.1 butyrophilin subfamily 2 member A1 6p22.1 CV:GWASdb
CV:PGCnp
DMG: Jaffe_2016
GSMA_I
Ascano FMRP targets
3400 ID4 IDB4 | bHLHb27 inhibitor of DNA binding 4, HLH protein 6p22.3 CV:GWASdb
CV:PGCnp
DMG: Jaffe_2016
GO_Annotation
GSMA_I
94234 FOXQ1 HFH1 forkhead box Q1 6p25 CV:PGCnp
GSMA_I
PMID:cooccur
2045 EPHA7 EHK-3 | EHK3 | EK11 | HEK11 EPH receptor A7 6q16.1 CV:GWASdb
CV:PGCnp
2534 FYN SLK | SYN | p59-FYN FYN proto-oncogene, Src family tyrosine kinase 6q21 CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
3910 LAMA4 CMD1JJ | LAMA3 | LAMA4*-1 laminin subunit alpha 4 6q21 CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
29940 DSE DSEP | DSEPI | EDSMC2 | SART-2 | SART2 dermatan sulfate epimerase 6q22 CV:PGCnp
PMID:cooccur
2697 GJA1 AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCA gap junction protein alpha 1 6q22.31 CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9590 AKAP12 AKAP250 | SSeCKS A-kinase anchoring protein 12 6q24-q25 CV:PGCnp
DMG: Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
5325 PLAGL1 LOT1 | ZAC | ZAC1 PLAG1 like zinc finger 1 6q24-q25 CV:PGCnp
DMG:Wockner_2014
9805 SCRN1 SES1 secernin 1 7p14.3 CV:PGCnp
DMG: Jaffe_2016
DNM:Fromer_2014
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
221895 JAZF1 TIP27 | ZNF802 JAZF zinc finger 1 7p15.2-p15.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
25928 SOSTDC1 CDA019 | ECTODIN | USAG1 sclerostin domain containing 1 7p21.1 CV:GWASdb
CV:PGCnp
3315 HSPB1 CMT2F | HEL-S-102 | HMN2B | HS.76067 | HSP27 | HSP28 | Hsp25 | SRP27 heat shock protein family B (small) member 1 7q11.23 CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1577 CYP3A5 CP35 | CYPIIIA5 | P450PCN3 | PCN3 cytochrome P450 family 3 subfamily A member 5 7q21.1 ADT:Sun_2012
CV:PGCnp
PMID:cooccur
9723 SEMA3E M-SEMAH | M-SemaK | SEMAH | coll-5 semaphorin 3E 7q21.11 CV:GWASdb
CV:PGCnp
GO_Annotation
5166 PDK4 - pyruvate dehydrogenase kinase 4 7q21.3 CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
Expression
8910 SGCE DYT11 | ESG sarcoglycan epsilon 7q21.3 CV:PGCnp
7205 TRIP6 OIP-1 | OIP1 | TRIP-6 | TRIP6i2 | ZRP-1 thyroid hormone receptor interactor 6 7q22 CV:PGCnp
Network
1278 COL1A2 OI4 collagen type I alpha 2 7q22.1 CV:GWASdb
CV:PGCnp
857 CAV1 BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21 caveolin 1 7q31.1 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
858 CAV2 CAV caveolin 2 7q31.1 CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
64753 CCDC136 NAG6 coiled-coil domain containing 136 7q33 CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
800 CALD1 CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22 caldesmon 1 7q33 CV:PGCnp
DMG:Wockner_2014
Expression
Network
231 AKR1B1 ADR | ALDR1 | ALR2 | AR aldo-keto reductase family 1, member B1 (aldose reductase) 7q35 CV:PGCnp
DMG: Jaffe_2016
59339 PLEKHA2 TAPP2 pleckstrin homology domain containing A2 8p11.22 CV:PGCnp
DMG: Jaffe_2016
6867 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 8p11.22 CV:PGCnp
DMG:Wockner_2014
2260 FGFR1 BFGFR | CD331 | CEK | FGFBR | FGFR-1 | FLG | FLT-2 | FLT2 | HBGFR | HH2 | HRTFDS | KAL2 | N-SAM | OGD | bFGF-R-1 fibroblast growth factor receptor 1 8p11.23-p11.22 Association
CV:PGCnp
Network
PMID:cooccur
11030 RBPMS HERMES RNA binding protein with multiple splicing 8p12 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
Network
1191 CLU AAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2 clusterin 8p21-p12 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG: Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5533 PPP3CC CALNA3 | CNA3 | PP2Bgamma protein phosphatase 3 catalytic subunit gamma 8p21.3 Association
Core
CV:PGCnp
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
1508 CTSB APPS | CPSB cathepsin B 8p22 CV:PGCnp
DMG: Jaffe_2016
DMG:Wockner_2014
Network
6591 SNAI2 SLUG | SLUGH1 | SNAIL2 | WS2D snail family zinc finger 2 8q11 CV:PGCnp
PMID:cooccur
5179 PENK PE | PENK-A proenkephalin 8q12.1 CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
80243 PREX2 6230420N16Rik | DEP.2 | DEPDC2 | P-REX2 | PPP1R129 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 8q13.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
7373 COL14A1 UND collagen type XIV alpha 1 8q23 CV:PGCnp
DMG: Jaffe_2016
7169 TPM2 AMCD1 | DA1 | DA2B | HEL-S-273 | NEM4 | TMSB tropomyosin 2 (beta) 9p13 CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
304 ANXA2P2 ANX2L2 | ANX2P2 | LPC2B annexin A2 pseudogene 2 9p13 CV:PGCnp
84909 C9orf3 AOPEP | AP-O | APO | C90RF3 | ONPEP chromosome 9 open reading frame 3 9q22.32 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
85301 COL27A1 STLS collagen type XXVII alpha 1 9q32 CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
153090 DAB2IP AF9Q34 | AIP-1 | AIP1 | DIP1/2 DAB2 interacting protein 9q33.1-q33.3 CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2040 STOM BND7 | EPB7 | EPB72 stomatin 9q34.1 CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5730 PTGDS L-PGDS | LPGDS | PDS | PGD2 | PGDS | PGDS2 prostaglandin D2 synthase 9q34.2-q34.3 PMID:cooccur
1756 DMD BMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85 dystrophin Xp21.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
4810 NHS CTRCT40 | CXN | SCML1 NHS actin remodeling regulator Xp22.13 CV:PGCnp
DNM:McCarthy_2014
PMID:cooccur
Ascano FMRP targets
2824 GPM6B M6B glycoprotein M6B Xp22.2 CV:PGCnp
DEG:Zhao_2015
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Potential synaptic genes


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