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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group? | Functional group? |
|---|---|---|---|---|---|---|
| 25805 | BAMBI | NMA | BMP and activin membrane-bound inhibitor | 10p12.3-p11.2 | CV:PGCnp | |
| 7431 | VIM | CTRCT30 | HEL113 | vimentin | 10p13 | CV:PGCnp PMID:cooccur |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet |
| 80312 | TET1 | CXXC6 | LCX | MLL-TET1 | TET1-MLL | bA119F7.1 | tet methylcytosine dioxygenase 1 | 10q21 | CV:PGCnp PMID:cooccur |
Chromatin Remodeling Genes |
| 288 | ANK3 | ANKYRIN-G | MRT37 | ankyrin 3, node of Ranvier (ankyrin G) | 10q21 | CV:GWAScat CV:GWASdb CV:PGCnp GO_Annotation PMID:cooccur |
STRUCTURAL PLASTICITY G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet Darnell FMRP targets Ascano FMRP targets Potential synaptic genes |
| 54536 | EXOC6 | EXOC6A | SEC15 | SEC15L | SEC15L1 | SEC15L3 | Sec15p | exocyst complex component 6 | 10q23.33 | CV:PGCnp DMG:Jaffe_2016 DMG:vanEijk_2014 DMG:Wockner_2014 |
EXOCYTOSIS |
| 5950 | RBP4 | MCOPCB10 | RDCCAS | retinol binding protein 4 | 10q23.33 | CV:PGCnp PMID:cooccur |
|
| 90993 | CREB3L1 | OASIS | cAMP responsive element binding protein 3-like 1 | 11p11.2 | CV:PGC128 CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 |
|
| 54503 | ZDHHC13 | HIP14L | HIP3RP | zinc finger DHHC-type containing 13 | 11p15.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 6947 | TCN1 | HC | TC-1 | TC1 | TCI | transcobalamin 1 | 11q11-q12 | CV:PGCnp DMG:vanEijk_2014 |
|
| 4312 | MMP1 | CLG | CLGN | matrix metallopeptidase 1 | 11q22.3 | PMID:cooccur | |
| 4322 | MMP13 | CLG3 | MANDP1 | MMP-13 | matrix metallopeptidase 13 | 11q22.3 | CV:GWASdb CV:PGCnp |
|
| 4837 | NNMT | - | nicotinamide N-methyltransferase | 11q23.1 | CV:PGCnp GSMA_I PMID:cooccur |
|
| 4162 | MCAM | CD146 | MUC18 | melanoma cell adhesion molecule | 11q23.3 | CV:PGCnp DMG:Wockner_2014 GSMA_I |
|
| 4013 | VWA5A | BCSC-1 | BCSC1 | LOH11CR2A | von Willebrand factor A domain containing 5A | 11q24.1 | CV:PGCnp | |
| 83857 | TMTC1 | ARG99 | OLF | TMTC1A | transmembrane and tetratricopeptide repeat containing 1 | 12p11.22 | CV:GWAScat CV:GWASdb CV:PGC128 CV:PGCnp |
|
| 2026 | ENO2 | HEL-S-279 | NSE | enolase 2 (gamma, neuronal) | 12p13 | PMID:cooccur | CELL METABOLISM G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.human_clathrin G2Cdb.human_Synaptosome G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet |
| 196528 | ARID2 | BAF200 | p200 | AT-rich interaction domain 2 | 12q12 | CV:PGCnp DNM:Fromer_2014 |
CompositeSet Darnell FMRP targets |
| 7103 | TSPAN8 | CO-029 | TM4SF3 | tetraspanin 8 | 12q21.1 | CV:PGCnp PMID:cooccur |
|
| 80018 | NAA25 | C12orf30 | MDM20 | NAP1 | N(alpha)-acetyltransferase 25, NatB auxiliary subunit | 12q24.13 | CV:PGCnp CV:PheWAS DMG:Wockner_2014 |
|
| 5911 | RAP2A | K-REV | KREV | RAP2 | RbBP-30 | RAP2A, member of RAS oncogene family | 13q34 | CV:PGCnp DMG:Jaffe_2016 Network |
INTRACELLULAR SIGNAL TRANSDUCTION G2Cdb.humanNRC G2Cdb.humanPSP Potential synaptic genes |
| 6038 | RNASE4 | RAB1 | RNS4 | ribonuclease A family member 4 | 14q11 | CV:GWASdb CV:PGCnp GSMA_I |
|
| 3169 | FOXA1 | HNF3A | TCF3A | forkhead box A1 | 14q21.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 145407 | C14orf37 | c14_5376 | chromosome 14 open reading frame 37 | 14q23.1 | CV:PGCnp DMG:Jaffe_2016 |
|
| 22846 | VASH1 | KIAA1036 | vasohibin 1 | 14q24.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 1396 | CRIP1 | CRHP | CRIP | CRP-1 | CRP1 | cysteine rich protein 1 | 14q32.33 | DMG:Wockner_2014 | |
| 56924 | PAK6 | PAK5 | p21 protein (Cdc42/Rac)-activated kinase 6 | 15q14 | CV:GWAScat CV:PGC128 CV:PGCnp |
CompositeSet Darnell FMRP targets |
| 145741 | C2CD4A | FAM148A | NLF1 | C2 calcium-dependent domain containing 4A | 15q22.2 | CV:PGCnp CV:PheWAS |
|
| 3658 | IREB2 | ACO3 | IRP2 | IRP2AD | iron responsive element binding protein 2 | 15q25.1 | CV:PGCnp CV:PheWAS |
|
| 2521 | FUS | ALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLS | FUS RNA binding protein | 16p11.2 | CV:PGCnp DMG:Jaffe_2016 GSMA_IIE PMID:cooccur |
G2Cdb.humanNRC G2Cdb.humanPSP Potential synaptic genes |
| 51760 | SYT17 | sytXVII | synaptotagmin 17 | 16p12.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 GO_Annotation GSMA_IIE |
|
| 5493 | PPL | - | periplakin | 16p13.3 | CV:PGCnp PMID:cooccur |
|
| 58191 | CXCL16 | CXCLG16 | SR-PSOX | SRPSOX | C-X-C motif chemokine ligand 16 | 17p13 | PMID:cooccur | |
| 9241 | NOG | SYM1 | SYNS1 | SYNS1A | noggin | 17q22 | CV:PGCnp CV:PheWAS GO_Annotation |
|
| 51129 | ANGPTL4 | ARP4 | FIAF | HARP | HFARP | NL2 | PGAR | TGQTL | UNQ171 | pp1158 | angiopoietin like 4 | 19p13.3 | CV:PGCnp GO_Annotation PMID:cooccur |
|
| 54855 | FAM46C | - | family with sequence similarity 46 member C | 1p12 | CV:PGCnp DMG:Jaffe_2016 DMG:Montano_2016 GSMA_I GSMA_IIA |
|
| 148534 | TMEM56 | - | transmembrane protein 56 | 1p21.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 55283 | MCOLN3 | TRP-ML3 | TRPML3 | mucolipin 3 | 1p22.3 | CV:PGCnp | |
| 3707 | ITPKB | IP3-3KB | IP3K | IP3K-B | IP3KB | PIG37 | inositol-trisphosphate 3-kinase B | 1q42.13 | CV:PGCnp DMG:Wockner_2014 Network |
|
| 54453 | RIN2 | MACS | RASSF4 | Ras and Rab interactor 2 | 20p11.22 | CV:GWAScat CV:GWASdb CV:PGCnp GSMA_I |
|
| 400931 | MIRLET7BHG | linc-Ppara | MIRLET7B host gene | 22q13.31 | CV:PGCnp | |
| 11037 | STON1 | SALF | SBLF | STN1 | STNB1 | stonin 1 | 2p16.3 | CV:PGCnp | |
| 238 | ALK | CD246 | NBLST3 | anaplastic lymphoma receptor tyrosine kinase | 2p23 | Association CV:GWASdb CV:PGCnp GO_Annotation PMID:cooccur |
|
| 28951 | TRIB2 | C5FW | GS3955 | TRB2 | tribbles pseudokinase 2 | 2p24.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 |
|
| 7852 | CXCR4 | CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMS | C-X-C motif chemokine receptor 4 | 2q21 | CV:GWASdb CV:PGCnp GO_Annotation GSMA_I GSMA_IIA PMID:cooccur |
|
| 7273 | TTN | CMD1G | CMH9 | CMPD4 | EOMFC | HMERF | LGMD2J | MYLK5 | TMD | titin | 2q31 | CV:PGCnp DNM:Fromer_2014 DNM:McCarthy_2014 Network |
CompositeSet |
| 5163 | PDK1 | - | pyruvate dehydrogenase kinase 1 | 2 q31.1 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
|
| 285025 | CCDC141 | CAMDI | coiled-coil domain containing 141 | 2 q31.2 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 |
|
| 9262 | STK17B | DRAK2 | serine/threonine kinase 17b | 2q32.3 | CV:PGCnp | |
| 284992 | CCDC150 | - | coiled-coil domain containing 150 | 2q33.1 | CV:GWASdb CV:PGCnp |
|
| 80055 | PGAP1 | Bst1 | ISPD3024 | MRT42 | SPG67 | post-GPI attachment to proteins 1 | 2q33.1 | CV:PGCnp | |
| 2335 | FN1 | CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSF | fibronectin 1 | 2q34 | CV:PGCnp DNM:Fromer_2014 DNM:Guipponi_2014 GR_Ng GSMA_IIA GSMA_IIE PMID:cooccur |
CompositeSet |
| 727936 | GXYLT2 | GLT8D4 | glucoside xylosyltransferase 2 | 3p13 | CV:PGCnp DMG:Montano_2016 DNM:Fromer_2014 GSMA_IIA GSMA_IIE |
CompositeSet |
| 5210 | PFKFB4 | - | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 | 3p22-p21 | DEG:Zhao_2015 | |
| 92999 | ZBTB47 | ZNF651 | zinc finger and BTB domain containing 47 | 3p22.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 9209 | LRRFIP2 | HUFI-2 | leucine rich repeat (in FLII) interacting protein 2 | 3p22.2 | CV:PGCnp GSMA_I |
|
| 9901 | SRGAP3 | ARHGAP14 | MEGAP | SRGAP2 | WRP | SLIT-ROBO Rho GTPase activating protein 3 | 3p25.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 PMID:cooccur |
CompositeSet Darnell FMRP targets Potential synaptic genes |
| 3708 | ITPR1 | ACV | CLA4 | INSP3R1 | IP3R | IP3R1 | PPP1R94 | SCA15 | SCA16 | SCA29 | inositol 1,4,5-trisphosphate receptor type 1 | 3p26.1 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 DNM:Fromer_2014 PMID:cooccur |
G2Cdb.human_mGluR5 G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 56987 | BBX | ARTC1 | HBP2 | HSPC339 | MDS001 | bobby sox homolog (Drosophila) | 3q13.1 | CV:GWASdb CV:PGCnp CV:PheWAS DEG:Zhao_2015 Expression GSMA_IIA GSMA_IIE |
|
| 4071 | TM4SF1 | H-L6 | L6 | M3S1 | TAAL6 | transmembrane 4 L six family member 1 | 3q21-q25 | DMG:Wockner_2014 | |
| 26996 | GPR160 | GPCR1 | GPCR150 | G protein-coupled receptor 160 | 3q26.2-q27 | CV:PGCnp | |
| 54165 | DCUN1D1 | DCNL1 | DCUN1L1 | RP42 | SCCRO | SCRO | Tes3 | defective in cullin neddylation 1 domain containing 1 | 3q26.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 2049 | EPHB3 | ETK2 | HEK2 | TYRO6 | EPH receptor B3 | 3q27.1 | CV:PGCnp DNM:Fromer_2014 GO_Annotation |
|
| 1010 | CDH12 | CDHB | cadherin 12 | 5p14.3 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
CELL ADHESION AND TRANSSYNAPTIC SIGNALING |
| 1767 | DNAH5 | CILD3 | DNAHC5 | HL1 | KTGNR | PCD | dynein axonemal heavy chain 5 | 5p15.2 | CV:GWASdb CV:PGCnp |
|
| 81848 | SPRY4 | HH17 | sprouty RTK signaling antagonist 4 | 5q31.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GO_Annotation GSMA_I PMID:cooccur |
|
| 23304 | UBR2 | C6orf133 | bA49A4.1 | dJ242G1.1 | dJ392M17.3 | ubiquitin protein ligase E3 component n-recognin 2 | 6p21.1 | CV:PGCnp DMG:Wockner_2014 GSMA_I GSMA_IIE |
|
| 7941 | PLA2G7 | LDL-PLA2 | LP-PLA2 | PAFAD | PAFAH | phospholipase A2 group VII | 6p21.2-p12 | CV:PGCnp GSMA_IIE PMID:cooccur |
|
| 6239 | RREB1 | FINB | HNT | LZ321 | RREB-1 | Zep-1 | ras responsive element binding protein 1 | 6p25 | CV:PGCnp DMG:Nishioka_2013 DMG:Wockner_2014 GSMA_I |
|
| 63027 | SLC22A23 | C6orf85 | solute carrier family 22 member 23 | 6p25.2 | CV:GWAScat CV:PGCnp DNM:Guipponi_2014 PMID:cooccur |
|
| 93664 | CADPS2 | - | Ca2+ dependent secretion activator 2 | 7q31.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 Network PMID:cooccur |
Potential synaptic genes |
| 11030 | RBPMS | HERMES | RNA binding protein with multiple splicing | 8p12 | CV:PGCnp CV:PheWAS DMG:Wockner_2014 GSMA_IIA GSMA_IIE Network |
|
| 55790 | CSGALNACT1 | CSGalNAcT-1 | ChGn | beta4GalNAcT | chondroitin sulfate N-acetylgalactosaminyltransferase 1 | 8p21.3 | CV:GWASdb CV:PGCnp GO_Annotation |
|
| 79660 | PPP1R3B | GL | PPP1R4 | PTG | protein phosphatase 1 regulatory subunit 3B | 8p23.1 | CV:PGCnp | |
| 10397 | NDRG1 | CAP43 | CMT4D | DRG-1 | DRG1 | GC4 | HMSNL | NDR1 | NMSL | PROXY1 | RIT42 | RTP | TARG1 | TDD5 | N-myc downstream regulated 1 | 8q24.3 | CV:PGCnp DEG:Zhao_2015 Network |
|
| 79937 | CNTNAP3 | CASPR3 | CNTNAP3A | contactin associated protein-like 3 | 9p13.1 | CV:PGCnp GO_Annotation PMID:cooccur |
|
| 4300 | MLLT3 | AF9 | YEATS3 | myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 | 9p22 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 PMID:cooccur |
|
| 727 | C5 | C5D | C5a | C5b | CPAMD4 | ECLZB | complement component 5 | 9q33-q34 | CV:PGCnp GO_Annotation PMID:cooccur |
|
| 65267 | WNK3 | PRKWNK3 | WNK lysine deficient protein kinase 3 | Xp11.22 | CV:PGCnp PMID:cooccur |
Potential synaptic genes |