Search results: The pahtwayp1436has 74 genes in the original annotation. Currently, there are 45 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
27063 ANKRD1 ALRP | C-193 | CARP | CVARP | MCARP | bA320F15.2 ankyrin repeat domain 1 10q23.31 CV:PGCnp
PMID:cooccur
4005 LMO2 RBTN2 | RBTNL1 | RHOM2 | TTG2 LIM domain only 2 11p13 CV:PGCnp
DMG:Jaffe_2016
359787 DPPA3 STELLA developmental pluripotency associated 3 12p13.31 CV:PGCnp
5801 PTPRR EC-PTP | PCPTP1 | PTP-SL | PTPBR7 | PTPRQ protein tyrosine phosphatase, receptor type R 12q15 CV:PGCnp
728215 FAM155A - family with sequence similarity 155 member A 13q33.3 CV:GWASdb
CV:PGCnp
9369 NRXN3 C14orf60 neurexin 3 14q31 CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
145741 C2CD4A FAM148A | NLF1 C2 calcium-dependent domain containing 4A 15q22.2 CV:PGCnp
CV:PheWAS
220 ALDH1A3 ALDH1A6 | ALDH6 | MCOP8 | RALDH3 aldehyde dehydrogenase 1 family member A3 15q26.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8140 SLC7A5 4F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1 solute carrier family 7 member 5 16q24.3 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
4642 MYO1D PPP1R108 | myr4 肌球蛋白ID 17q11.2 CV:PGCnp G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
3675 ITGA3 CD49C | FRP-2 | GAP-B3 | GAPB3 | ILNEB | MSK18 | VCA-2 | VL3A | VLA3a integrin subunit alpha 3 17q21.33 CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
10801 SEPT9 AF17q25 | MSF | MSF1 | NAPB | PNUTL4 | SINT1 | SeptD1 septin 9 17q25 CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2627 GATA6 - GATA binding protein 6 18q11.1-q11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5055 SERPINB2 HsT1201 | PAI | PAI-2 | PAI2 | PLANH2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 18q21.3 DMG:Wockner_2014
GO_Annotation
51129 ANGPTL4 ARP4 | FIAF | HARP | HFARP | NL2 | PGAR | TGQTL | UNQ171 | pp1158 angiopoietin like 4 19p13.3 CV:PGCnp
GO_Annotation
PMID:cooccur
5999 RGS4 RGP4 | SCZD9 regulator of G-protein signaling 4 1q23.3 Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
GSMA_IIA
Network
PMID:cooccur
Potential synaptic genes
343450 KCNT2 KCa4.2 | SLICK | SLO2.1 potassium sodium-activated channel subfamily T member 2 1q31.3 CV:PGCnp
DMG:Jaffe_2016
57419 SLC24A3 NCKX3 solute carrier family 24 member 3 20p13 CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
5740 PTGIS CYP8 | CYP8A1 | PGIS | PTGI prostaglandin I2 (prostacyclin) synthase 20q13.13 CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Ambalavanan_2016
64092 SAMSN1 HACS1 | NASH1 | SASH2 | SH3D6B | SLy2 SAM domain, SH3 domain and nuclear localization signals 1 21q11 CV:PGCnp
PMID:cooccur
23233 EXOC6B SEC15B | SEC15L2 exocyst complex component 6B 2p13.2 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
2646 GCKR FGQTL5 | GKRP glucokinase (hexokinase 4) regulator 2p23 CV:GWASdb
CV:PGCnp
3553 IL1B IL-1 | IL1-BETA | IL1F2 interleukin 1 beta 2q14 Association
Core
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
Network
PMID:cooccur
1803 DPP4 ADABP | ADCP2 | CD26 | DPPIV | TP103 二肽基肽酶4 2q24.3 CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
7857 SCG2 CHGC | EM66 | SN | SgII secretogranin II 2q35-q36 CV:GWASdb
CV:PGCnp
Expression
GR_Ng
GSMA_IIA
GSMA_IIE
神经营养蛋白信号传导
3700 ITIH4 GP120 | H4P | IHRP | ITI-HC4 | ITIHL1 | PK-120 | PK120 inter-alpha-trypsin inhibitor heavy chain family member 4 3p21.1 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
LK:YES
PMID:cooccur
5010 CLDN11 OSP | OTM claudin 11 3q26.2-q26.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.humanPSD
83891 SNX25 MSTP043 | SBBI31 sorting nexin 25 4q35.1 CV:PGCnp
DMG:vanEijk_2014
3673 ITGA2 BR | CD49B | GPIa | HPA-5 | VLA-2 | VLAA2 integrin subunit alpha 2 5 q11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
Ascano FMRP targets
401190 RGS7BP R7BP regulator of G-protein signaling 7 binding protein 5q12.3 CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
153830 RNF145 - ring finger protein 145 5q33.3 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
81792 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 5q35 CV:PGCnp
PMID:cooccur
6310 ATXN1 ATX1 | D6S504E | SCA1 ataxin 1 6p23 Association
CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
63027 SLC22A23 C6orf85 solute carrier family 22 member 23 6p25.2 CV:GWAScat
CV:PGCnp
DNM:Guipponi_2014
PMID:cooccur
10846 PDE10A HSPDE10A 磷酸二酯酶10 6q26 CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
5723 PSPH PSP | PSPHD phosphoserine phosphatase 7p11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5054 SERPINE1 PAI | PAI-1 | PAI1 | PLANH1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 7q22.1 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
1978 EIF4EBP1 4E-BP1 | 4EBP1 | BP-1 | PHAS-I eukaryotic translation initiation factor 4E binding protein 1 8p12 CV:PGCnp
DMG:Jaffe_2016
Network
5327 PLAT T-PA | TPA plasminogen activator, tissue type 8p12 CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
Potential synaptic genes
55790 CSGALNACT1 CSGalNAcT-1 | ChGn | beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 8p21.3 CV:GWASdb
CV:PGCnp
GO_Annotation
5157 PDGFRL PDGRL | PRLTS platelet derived growth factor receptor like 8p22-p21.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
83648 FAM167A C8orf13 | D8S265 family with sequence similarity 167 member A 8p23-p22 CV:PGCnp
1029 CDKN2A ARF | CDK4I | CDKN2 | CMM2 | INK4 | INK4A | MLM | MTS-1 | MTS1 | P14 | P14ARF | P16 | P16-INK4A | P16INK4 | P16INK4A | P19 | P19ARF | TP16 cyclin-dependent kinase inhibitor 2A 9p21 CV:PGCnp
DMG:Nishioka_2013
Network
7099 TLR4 ARMD10 |CD284 |TLR-4 |收费 toll like receptor 4 9q33.1 CV:PGCnp
PMID:cooccur
1756 DMD BMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85 dystrophin Xp21.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet


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