Search results: The pahtwayp1450has 43 genes in the original annotation. Currently, there are 30 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
83641 FAM107B C10orf45 family with sequence similarity 107 member B 10p13 CV:GWASdb
CV:PGCnp
2625 GATA3 HDR | HDRS GATA binding protein 3 10p15 CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
5795 PTPRJ CD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1 protein tyrosine phosphatase, receptor type J 11p11.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
56675 NRIP3 C11orf14 | NY-SAR-105 nuclear receptor interacting protein 3 11p15.3 CV:PGCnp
10938 EHD1 H-PAST | HPAST1 | PAST | PAST1 EH domain containing 1 11q13 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
81539 SLC38A1 ATA1 | NAT2 | SAT1 | SNAT1 38溶质载体家庭成员1 12q13.11 CV:PGCnp
GO_Annotation
51561 IL23A IL-23 | IL-23A | IL23P19 | P19 | SGRF interleukin 23 subunit alpha 12q13.3 CV:PGCnp
688 KLF5 BTEB2 | CKLF | IKLF Kruppel-like factor 5 (intestinal) 13q22.1 Association
CV:PGCnp
PMID:cooccur
1284 COL4A2 ICH | POREN2 collagen type IV alpha 2 13q34 CV:GWAScat
CV:GWASdb
CV:PGCnp
22856 CHSY1 CHSY | CSS1 | ChSy-1 | TPBS chondroitin sulfate synthase 1 15q26.3 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
57478 USP31 - ubiquitin specific peptidase 31 16p12.2 CV:GWASdb
CV:PGCnp
GSMA_IIE
4818 NKG7 GIG1 | GMP-17 | p15-TIA-1 natural killer cell granule protein 7 19q13.41 DMG:vanEijk_2014
3738 KCNA3 HGK5 | HLK3 | HPCN3 | HUKIII | KV1.3 | MK3 | PCN3 potassium voltage-gated channel subfamily A member 3 1p13.3 CV:GWASdb
CV:PGCnp
GSMA_I
9261 MAPKAPK2 MAPKAP-K2 | MK-2 | MK2 mitogen-activated protein kinase-activated protein kinase 2 1q32 CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
253782 CERS6 CERS5 | LASS6 ceramide synthase 6 2q24.3 CV:PGCnp
GSMA_IIA
54899 PXK MONaKA PX domain containing serine/threonine kinase like 3p14.3 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
55152 DALRD3 - DALR anticodon binding domain containing 3 3p21.31 CV:PGCnp
5021 OXTR OT-R oxytocin receptor 3p25 CV:PGCnp
Expression
PMID:cooccur
Potential synaptic genes
55840 EAF2 BM040 | TRAITS | U19 ELL associated factor 2 3q13.33 CV:PGCnp
4071 TM4SF1 H-L6 | L6 | M3S1 | TAAL6 transmembrane 4 L six family member 1 3q21-q25 DMG:Wockner_2014
83478 ARHGAP24 FILGAP | RC-GAP72 | RCGAP72 | p73 | p73RhoGAP Rho GTPase activating protein 24 4q22.1 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
23022 PALLD CGI-151 | CGI151 | MYN | PNCA1 | SIH002 palladin, cytoskeletal associated protein 4q32.3 CV:GWAScat
CV:PGCnp
Expression
PMID:cooccur
1462 VCAN CSPG2 | ERVR | GHAP | PG-M | WGN | WGN1 versican 5q14.3 CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
154 ADRB2 ADRB2R | ADRBR | B2AR | BAR | BETA2AR adrenoceptor beta 2 5q31-q32 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
GPCR SIGNALLING
1437 CSF2 GMCSF colony stimulating factor 2 5q31.1 CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
3593 IL12B CLMF | CLMF2 | IL-12B | IMD28 | IMD29 | NKSF | NKSF2 interleukin 12B 5q33.3 Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
8418 CMAHP CMAH | CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene 6p21.32 CV:PGCnp
3569 IL6 BSF-2 | BSF2 | CDF | HGF | HSF | IFN-beta-2 | IFNB2 | IL-6 interleukin 6 7p21 CV:GWASdb
CV:PGCnp
PMID:cooccur
5154 PDGFA PDGF-A | PDGF1 platelet derived growth factor subunit A 7p22 DMG:Jaffe_2016
Expression
55790 CSGALNACT1 CSGalNAcT-1 | ChGn | beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 8p21.3 CV:GWASdb
CV:PGCnp
GO_Annotation


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