Search results: The pahtwayp1451has 380 genes in the original annotation. Currently, there are 215 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
55691 FRMD4A CCAFCA | FRMD4 | bA295P9.4 FERM domain containing 4A 10p13 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
57713 SFMBT2 - Scm-like with four mbt domains 2 10p14 CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
2625 GATA3 HDR | HDRS GATA binding protein 3 10p15 CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
23185 LARP4B KIAA0217 | LARP5 La ribonucleoprotein domain family member 4B 10p15.3 CV:PGCnp
22982 DIP2C KIAA0934 disco interacting protein 2 homolog C 10p15.3 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23522 KAT6B GTPTS | MORF | MOZ2 | MYST4 | ZC2HC6B | qkf | querkopf lysine acetyltransferase 6B 10q22.2 CV:PGCnp
DMG:Jaffe_2016
Expression
57178 ZMIZ1 MIZ | RAI17 | TRAFIP10 | ZIMP10 | hZIMP10 zinc finger MIZ-type containing 1 10q22.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
29760 BLNK AGM4 | BASH | BLNK-S | LY57 | SLP-65 | SLP65 | bca B-cell linker 10q23.2-q23.33 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
90993 CREB3L1 OASIS cAMP responsive element binding protein 3-like 1 11p11.2 CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
4925 NUCB2 HEL-S-109 | NEFA nucleobindin 2 11p15.1 CV:GWASdb
CV:PGCnp
3263 HPX HX hemopexin 11p15.5-p15.4 PMID:cooccur
55048 VPS37C - VPS37C, ESCRT-I subunit 11q12.2 CV:GWASdb
CV:PGCnp
408 ARRB1 ARB1 | ARR1 arrestin, beta 1 11q13 CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
595 CCND1 BCL1 | D11S287E | PRAD1 | U21B31 cyclin D1 11q13 DMG:Jaffe_2016
Network
PMID:cooccur
22941 SHANK2 AUTS17 | CORTBP1 | CTTNBP1 | ProSAP1 | SHANK | SPANK-3 SH3 and multiple ankyrin repeat domains 2 11q13.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8322 FZD4 CD344 | EVR1 | FEVR | FZD4S | Fz-4 | Fz4 | FzE4 | GPCR | hFz4 frizzled class receptor 4 11q14.2 CV:PGCnp
DMG:Wockner_2014
5241 PGR NR3C3 | PR progesterone receptor 11q22-q23 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23705 CADM1 BL2 | IGSF4 | IGSF4A | NECL2 | Necl-2 | RA175 | ST17 | SYNCAM | TSLC1 | sTSLC-1 | sgIGSF | synCAM1 cell adhesion molecule 1 11q23.2 CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
196528 ARID2 BAF200 | p200 at富集作用域2 12q12 CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
377 ARF3 - ADP ribosylation factor 3 12q13 DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
784 CACNB3 CAB3 | CACNLB3 calcium voltage-gated channel auxiliary subunit beta 3 12q13 CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2065 ERBB3 ErbB-3 | HER3 | LCCS2 | MDA-BF-1 | c-erbB-3 | c-erbB3 | erbB3-S | p180-ErbB3 | p45-sErbB3 | p85-sErbB3 erb-b2 receptor tyrosine kinase 3 12q13 Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
81539 SLC38A1 ATA1 | NAT2 | SAT1 | SNAT1 solute carrier family 38 member 1 12q13.11 CV:PGCnp
GO_Annotation
140461 ASB8 PP14212 ankyrin repeat and SOCS box containing 8 12q13.11 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
112 ADCY6 AC6 | LCCS8 adenylate cyclase 6 12q13.12 CV:PGCnp
Network
9498 SLC4A8 NBC3 | NDCBE 溶质载体家庭4成员8 12q13.13 CV:PGCnp
DNM:Fromer_2014
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
5094 PCBP2 HNRNPE2 | HNRPE2 | hnRNP-E2 poly(rC) binding protein 2 12q13.13 CV:PGCnp
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6601 SMARCC2 BAF170 | CRACC2 | Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 12q13.2 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
4141 MARS CMT2U | ILFS2 | ILLD | METRS | MRS | MTRNS | SPG70 methionyl-tRNA synthetase 12q13.3 CV:PGCnp
Network
PMID:cooccur
11163 NUDT4 DIPP2 | DIPP2alpha | DIPP2beta | HDCMB47P nudix hydrolase 4 12q21 CV:PGCnp
6926 TBX3 TBX3-ISO | UMS | XHL T-box 3 12q24.21 CV:GWASdb
CV:PGCnp
5426 POLE CRCS12 | FILS | POLE1 polymerase (DNA) epsilon, catalytic subunit 12q24.3 CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7637 ZNF84 HPF2 zinc finger protein 84 12q24.33 DMG:Jaffe_2016
1602 DACH1 DACH dachshund family transcription factor 1 13q22 CV:PGCnp
2155 F7 SPCA coagulation factor VII 13q34 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
23428 SLC7A8 LAT2 | LPI-PC1 solute carrier family 7 member 8 14q11.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
253959 RALGAPA1 GARNL1 | GRIPE | RalGAPalpha1 | TULIP1 | p240 Ral GTPase activating protein catalytic alpha subunit 1 14q13.2 CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
3169 FOXA1 HNF3A | TCF3A forkhead box A1 14q21.1 CV:PGCnp
DMG:Wockner_2014
23002 DAAM1 - dishevelled associated activator of morphogenesis 1 14q23.1 Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
7043 TGFB3 ARVD | ARVD1 | LDS5 | RNHF | TGF-beta3 transforming growth factor beta 3 14q24 CV:PGCnp
57475 PLEKHH1 - pleckstrin homology, MyTH4 and FERM domain containing H1 14q24.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
161145 TMEM229B C14orf83 transmembrane protein 229B 14q24.1 CV:PGCnp
DMG:Wockner_2014
9517 SPTLC2 HSN1C | LCB2 | LCB2A | NSAN1C | SPT2 | hLCB2a serine palmitoyltransferase long chain base subunit 2 14q24.3 CV:PGCnp
Expression
PMID:cooccur
Ascano FMRP targets
123036 TC2N C14orf47 | C2CD1 | MTAC2D1 | Tac2-N tandem C2 domains, nuclear 14q32.12 CV:GWASdb
CV:PGCnp
123096 SLC25A29 C14orf69 | CACL | ORNT3 solute carrier family 25 member 29 14q32.2 CV:PGCnp
DMG:Jaffe_2016
Expression
123099 DEGS2 C14orf66 | DES2 | FADS8 delta(4)-desaturase, sphingolipid 2 14q32.2 CV:PGCnp
PMID:cooccur
51466 EVL RNB6 Enah/Vasp-like 14q32.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
3712 IVD ACAD2 isovaleryl-CoA dehydrogenase 15q14-q15 CV:PGCnp
PMID:cooccur
10169 SERF2 4F5REL | FAM2C | H4F5REL | HsT17089 small EDRK-rich factor 2 15q15.3 CV:PGCnp
771 CA12 CA-XII | CAXII | HsT18816 | T18816 carbonic anhydrase XII 15q22 CV:PGCnp
DMG:Wockner_2014
79875 THSD4 ADAMTSL-6 | ADAMTSL6 | FVSY9334 | PRO34005 thrombospondin type 1 domain containing 4 15q23 CV:PGCnp
112476 PRRT2 BFIC2 | BFIS2 | DSPB3 | DYT10 | EKD1 | FICCA | ICCA | IFITMD1 | PKC proline rich transmembrane protein 2 16p11.2 CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
2521 FUS ALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLS FUS RNA binding protein 16p11.2 CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
79874 RABEP2 FRA rabaptin, RAB GTPase binding effector protein 2 16p11.2 CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
INTRACELLULAR TRAFFICKING
388228 SBK1 SBK SH3 domain binding kinase 1 16p11.2 CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
2975 GTF3C1 TFIIIC | TFIIIC220 | TFIIICalpha general transcription factor IIIC subunit 1 16p12 CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23247 KIAA0556 JBTS26 KIAA0556 16p12.1 CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
55623 THUMPD1 Tan1 THUMP domain containing 1 16p12.3 CV:PGCnp
GSMA_IIE
2013 EMP2 XMP epithelial membrane protein 2 16p13.2 CV:PGCnp
DMG:Montano_2016
9727 RAB11FIP3 CART1 | Rab11-FIP3 RAB11 family interacting protein 3 (class II) 16p13.3 CV:PGCnp
21 ABCA3 ABC-C | ABC3 | EST111653 | LBM180 | SMDP3 ATP binding cassette subfamily A member 3 16p13.3 CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
64285 RHBDF1 C16orf8 | Dist1 | EGFR-RS | gene-89 | gene-90 | hDist1 rhomboid 5 homolog 1 (Drosophila) 16p13.3 DNM:Fromer_2014 CompositeSet
7874 USP7 HAUSP | TEF1 ubiquitin specific peptidase 7 (herpes virus-associated) 16p13.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
Ascano FMRP targets
57799 RAB40C RARL | RASL8C RAB40C, member RAS oncogene family 16p13.3 CV:PGCnp
23295 MGRN1 RNF156 mahogunin ring finger 1, E3 ubiquitin protein ligase 16p13.3 CV:PGCnp
DMG:Montano_2016
80004 ESRP2 RBM35B epithelial splicing regulatory protein 2 16q22.1 CV:PGCnp
DMG:Jaffe_2016
124044 SPATA2L C16orf76 | tamo spermatogenesis associated 2 like 16q24.3 CV:PGCnp
51701 NLK - nemo-like kinase 17q11.2 CV:PGCnp
4137 MAPT DDPAC | FTDP-17 | MAPTL | MSTD | MTBT1 | MTBT2 | PPND | PPP1R103 | TAU microtubule associated protein tau 17q21.1 CV:PGCnp
CV:PheWAS
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
55040 EPN3 - epsin 3 17q21.33 CV:PGCnp
DMG:Wockner_2014
92335 STRADA LYK5 | NY-BR-96 | PMSE | STRAD | Stlk STE20-related kinase adaptor alpha 17q23.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
11325 DDX42 DDX42P | RHELP | RNAHP | SF3B8 | SF3b125 DEAD-box helicase 42 17q23.3 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
1534 CYB561 CYB561A1 | FRRS2 cytochrome b561 17q23.3 CV:PGCnp
DMG:Wockner_2014
27092 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 17q24 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
CompositeSet
Potential synaptic genes
1453 CSNK1D ASPS | CKIdelta | FASPS2 | HCKID casein kinase 1 delta 17q25 DMG:Wockner_2014
Network
PMID:cooccur
3993 LLGL2 HGL | Hugl-2 | LGL2 lethal giant larvae homolog 2, scribble cell polarity complex component 17q25.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
57409 MIF4GD AD023 | MIFD | SLIP1 MIF4G domain containing 17q25.1 DMG:Jaffe_2016
9368 SLC9A3R1 EBP50 | NHERF | NHERF-1 | NHERF1 | NPHLOP2 SLC9A3 regulator 1 17q25.1 DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
ION BALANCE
CompositeSet
5831 PYCR1 ARCL2B | ARCL3B | P5C | P5CR | PIG45 | PP222 | PRO3 | PYCR pyrroline-5-carboxylate reductase 1 17q25.3 PMID:cooccur G2Cdb.humanPSD
G2Cdb.humanPSP
124565 SLC38A10 PP1744 solute carrier family 38 member 10 17q25.3 CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
124583 CANT1 DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPY calcium activated nucleotidase 1 17q25.3 CV:PGCnp
284129 SLC26A11 - solute carrier family 26 member 11 17q25.3 CV:PGCnp
Expression
125058 TBC1D16 - TBC1 domain family member 16 17q25.3 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Ascano FMRP targets
7572 ZNF24 KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191 zinc finger protein 24 18q12 CV:PGCnp
4645 MYO5B - myosin VB 18q21 CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Potential synaptic genes
9480 ONECUT2 OC-2 | OC2 one cut homeobox 2 18q21.31 CV:PGCnp
DMG:Jaffe_2016
5205 ATP8B1 ATPIC | BRIC | FIC1 | ICP1 | PFIC | PFIC1 ATPase phospholipid transporting 8B1 18q21.31 CV:PGCnp
CV:PheWAS
10365 KLF2 LKLF Kruppel-like factor 2 19p13.11 CV:PGCnp
PMID:cooccur
57662 CAMSAP3 KIAA1543 | NEZHA | PPP1R80 calmodulin regulated spectrin associated protein family member 3 19p13.2 CV:PGCnp
404217 CTXN1 CTXN cortexin 1 19p13.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
23030 KDM4B JMJD2B | TDRD14B lysine demethylase 4B 19p13.3 CV:PGCnp
DMG:Wockner_2014
Expression
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
10362 HMG20B BRAF25 | BRAF35 | HMGX2 | HMGXB2 | PP7706 | SMARCE1r | SOXL | pp8857 high mobility group 20B 19p13.3 DMG:Jaffe_2016 Chromatin Remodeling Genes
2593 GAMT CCDS2 | HEL-S-20 | PIG2 | TP53I2 guanidinoacetate N-methyltransferase 19p13.3 CV:PGCnp
DEG:Sanders_2013
1675 CFD ADIPSIN | ADN | DF | PFD complement factor D (adipsin) 19p13.3 CV:PGCnp
GO_Annotation
PMID:cooccur
4037 LRP3 - LDL receptor related protein 3 19q13.11 CV:PGCnp CompositeSet
Darnell FMRP targets
54855 FAM46C - family with sequence similarity 46 member C 1p12 CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
GSMA_IIA
57535 KIAA1324 EIG121 KIAA1324 1p13.3 CV:PGCnp
DMG:Wockner_2014
22996 TTC39A C1orf34 |同类群- - - - - -6 tetratricopeptide repeat domain 39A 1p32.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5792 PTPRF BNAH2 | LAR protein tyrosine phosphatase, receptor type F 1p34 CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
7802 DNALI1 P28 | dJ423B22.5 | hp28 dynein axonemal light intermediate chain 1 1p35.1 CV:PGCnp
79570 NKAIN1 FAM77C Na+/K+ transporting ATPase interacting 1 1p35.2 CV:PGCnp
23623 RUSC1 NESCA RUN and SH3 domain containing 1 1q21-q22 CV:PGCnp
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
81609 SNX27 MRT1 | MY014 sorting nexin family member 27 1q21.3 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
23126 POGZ MRD37 | WHSUS | ZNF280E | ZNF635 | ZNF635m pogo transposable element with ZNF domain 1q21.3 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
CompositeSet
55870 ASH1L ASH1 | ASH1L1 | KMT2H ash1 (absent, small, or homeotic)-like (Drosophila) 1q22 CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
5087 PBX1 - pre-B-cell leukemia homeobox 1 1q23 CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
126823 KLHDC9 KARCA1 kelch domain containing 9 1q23.3 DMG:Jaffe_2016
GSMA_IIA
23215 PRRC2C BAT2-iso | BAT2D1 | BAT2L2 | XTP2 proline rich coiled-coil 2C 1q23.3 CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
27101 CACYBP GIG5 | PNAS-107 | S100A6BP | SIP calcyclin binding protein 1q24-q25 CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
9674 KIAA0040 - KIAA0040 1q25.1 CV:GWASdb
CV:PGCnp
9857 CEP350 CAP350 | GM133 centrosomal protein 350kDa 1q25.2 CV:PGCnp
DMG:Jaffe_2016
4194 MDM4 HDMX | MDMX | MRP1 MDM4, p53 regulator 1q32 CV:PGCnp
Network
PMID:cooccur
9580 SOX13 ICA12 | Sox-13 SRY-box 13 1q32 CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
10753 CAPN9 GC36 | nCL-4 calpain 9 1q42.11-q42.3 CV:PGCnp
DNM:Fromer_2014
CompositeSet
26090 ABHD12 ABHD12A | BEM46L2 | C20orf22 | PHARC | dJ965G21.2 abhydrolase domain containing 12 20p11.21 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
Expression
CompositeSet
57419 SLC24A3 NCKX3 solute carrier family 24 member 3 20p13 CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
60436 TGIF2 - TGFB induced factor homeobox 2 20q11.23 CV:PGCnp
DMG:Wockner_2014
81031 SLC2A10 ATS | GLUT10 solute carrier family 2 member 10 20q13.1 CV:GWASdb
CV:PGCnp
57580 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 20q13.13 CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
8537 BCAS1 AIBC1 | NABC1 breast carcinoma amplified sequence 1 20q13.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2618 GART AIRS | GARS | GARTF | PAIS | PGFT | PRGS phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 21q22.11 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
7267 TTC3 DCRR1 | RNF105 | TPRDIII tetratricopeptide repeat domain 3 21q22.2 CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9980 DOPEY2 21orf5 | C21orf5 dopey family member 2 21q22.2 CV:PGCnp CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7033 TFF3 ITF | P1B | TFI trefoil factor 3 21q22.3 CV:PGCnp
PMID:cooccur
89765 RSPH1 CT79 | RSP44 | RSPH10A | TSA2 | TSGA2 radial spoke head 1 homolog (Chlamydomonas) 21q22.3 CV:PGCnp
7625 ZNF74 COS52 | ZFP520 | ZNF520 | hZNF7 zinc finger protein 74 22q11.21 CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
5297 PI4KA PI4K-ALPHA | PIK4CA | PMGYCHA | pi4K230 phosphatidylinositol 4-kinase alpha 22q11.21 Association
CNV:YES
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CELL METABOLISM
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
84861 KLHL22 KELCHL kelch like family member 22 22q11.21 CNV:YES
CV:PGCnp
GSMA_I
CompositeSet
Darnell FMRP targets
8216 LZTR1 BTBD29 | LZTR-1 | NS10 | SWNTS2 leucine-zipper-like transcription regulator 1 22q11.21|22q11.1-q11.2 CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
150244 ZDHHC8P1 ZDHHC8P zinc finger DHHC-type containing 8 pseudogene 1 22q11.23 CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
150275 CCDC117 dJ366L4.1 coiled-coil domain containing 117 22q12.1 CV:PGCnp
GSMA_I
7494 XBP1 TREB-5 | TREB5 | XBP-1 | XBP2 X-box binding protein 1 22q12.1|22q12 Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
23598 PATZ1 MAZR | PATZ | RIAZ | ZBTB19 | ZNF278 | ZSG | dJ400N23 POZ/BTB and AT hook containing zinc finger 1 22q12.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
27124 INPP5J INPP5 | PIB5PA | PIPP inositol polyphosphate-5-phosphatase J 22q12.2 CV:GWASdb
CV:PGCnp
PMID:cooccur
3625 INHBB - inhibin beta B 2cen-q13 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
7844 RNF103 HKF-1 | KF-1 | KF1 | ZFP-103 | ZFP103 ring finger protein 103 2p11.2 CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GO_Annotation
GSMA_I
3099 HK2 HKII | HXK2 hexokinase 2 2p13 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
6509 SLC1A4 ASCT1 | SATT | SPATCCM solute carrier family 1 member 4 2p14 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
22979 EFR3B KIAA0953 EFR3 homolog B 2p23.3 CV:PGCnp G2Cdb.humanPSD
G2Cdb.humanPSP
388 RHOB ARH6 | ARHB | MST081 | MSTP081 | RHOH6 ras homolog family member B 2p24 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
4613 MYCN MODED | N-myc | NMYC | ODED | bHLHe37 v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 2p24.3 CV:PGCnp
DMG:Jaffe_2016
3899 AFF3 LAF4 | MLLT2-like AF4/FMR2 family member 3 2q11.2-q12 CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
11320 MGAT4A GNT-IV | GNT-IVA | GnT-4a mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A 2q12 CV:PGCnp
GSMA_I
PMID:cooccur
253782 CERS6 CERS5 | LASS6 ceramide synthase 6 2q24.3 CV:PGCnp
GSMA_IIA
64284 RAB17 - RAB17, member RAS oncogene family 2q37.3 CV:GWASdb
CV:PGCnp
79083 MLPH SLAC2-A melanophilin 2q37.3 CV:PGCnp
DMG:Nishioka_2013
776 CACNA1D CACH3 | CACN4 | CACNL1A2 | CCHL1A2 | Cav1.3 | PASNA | SANDD calcium voltage-gated channel subunit alpha1 D 3p14.3 CV:PGCnp
PMID:cooccur
EXCITABILITY
SEROTONIN
CompositeSet
Potential synaptic genes
9254 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 3p21.3 CV:PGCnp
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
54681 P4HTM EGLN4 | HIFPH4 | P4H-TM | PH-4 | PH4 | PHD4 prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 3p21.31|3p21.3 CV:PGCnp
DMG:Jaffe_2016
7433 VIPR1 HVR1 | II | PACAP-R-2 | PACAP-R2 | RDC1 | V1RG | VAPC1 | VIP-R-1 | VIPR | VIRG | VPAC1 | VPAC1R | VPCAP1R vasoactive intestinal peptide receptor 1 3p22 CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
GO_Annotation
Network
23171 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1-like 3p22.3 CV:PGCnp
GSMA_I
9922 IQSEC1 ARF-GEP100 | ARFGEP100 | BRAG2 | GEP100 IQ motif and Sec7 domain 1 3 p25.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
285368 PRRT3 - proline rich transmembrane protein 3 3 p25.3 DMG:Jaffe_2016
57633 LRRN1 FIGLER3 | NLRR-1 leucine rich repeat neuronal 1 3p26.2 CV:PGCnp
DMG:Jaffe_2016
64084 CLSTN2 ALC-GAMMA | CDHR13 | CS2 | CSTN2 | alcagamma calsyntenin 2 3q23 CV:GWASdb
CV:PGCnp
GO_Annotation
26996 GPR160 GPCR1 | GPCR150 Gprotein-coupled receptor 160 3q26.2-q27 CV:PGCnp
55286 C4orf19 - 4号染色体开放阅读框19 4p14 CV:PGCnp
DMG:Jaffe_2016
Expression
5522 PPP2R2C B55-GAMMA | IMYPNO | IMYPNO1 | PR52 | PR55G protein phosphatase 2 regulatory subunit B, gamma 4p16.1 CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
7466 WFS1 CTRCT41 | WFRS | WFS | WFSL wolframin ER transmembrane glycoprotein 4p16.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
84708 LNX1 LNX | MPDZ | PDZRN2 ligand of numb-protein X 1, E3 ubiquitin protein ligase 4q12 CV:PGCnp
DMG:Wockner_2014
81579 PLA2G12A GXII | PLA2G12 | ROSSY phospholipase A2 group XIIA 4q25 CV:PGCnp
DMG:Wockner_2014
5618 PRLR HPRL | MFAB | hPRLrI prolactin receptor 5p13.2 CV:PGCnp
PMID:cooccur
1501 CTNND2 GT24 | NPRAP catenin delta 2 5p15.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9765 ZFYVE16 PPP1R69 zinc finger FYVE-type containing 16 5q14 CV:PGCnp
DMG:Jaffe_2016
7905 REEP5 C5orf18 | D5S346 | DP1 | TB2 | YOP1 | Yip2e receptor accessory protein 5 5q22.2 CV:PGCnp
DMG:Jaffe_2016
Expression
5229 PGGT1B BGGI | GGTI protein geranylgeranyltransferase type I subunit beta 5q22.3 CV:PGCnp
51523 CXXC5 CF5 | HSPC195 | RINF | WID CXXC finger protein 5 5q31.2 CV:PGCnp
GSMA_I
309 ANXA6 ANX6 | CBP68 annexin A6 5q33.1 CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Ascano FMRP targets
10318 TNIP1 ABIN-1 |NAF1 | VAN | nip40-1 TNFAIP3 interacting protein 1 5q33.1 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
57222 ERGIC1 ERGIC-32 | ERGIC32 | NET24 endoplasmic reticulum-golgi intermediate compartment 1 5q35.1 CV:PGCnp
Expression
GSMA_IIA
80736 SLC44A4 C6orf29 | CTL4 | NG22 | TPPT solute carrier family 44 member 4 6p21.3 CV:PGCnp
GSMA_I
PMID:cooccur
5863 RGL2 HKE1.5 | KE1.5 | RAB2L ral guanine nucleotide dissociation stimulator like 2 6p21.3 CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
25803 SPDEF PDEF | bA375E1.3 SAM pointed domain containing ETS transcription factor 6p21.3 CV:PGCnp
GSMA_I
GSMA_IIE
23564 DDAH2 DDAH | DDAHII | G6a | HEL-S-277 | NG30 dimethylarginine dimethylaminohydrolase 2 6p21.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
54898 ELOVL2 SSC2 ELOVL fatty acid elongase 2 6p24.2 CV:PGCnp
GSMA_I
PMID:cooccur
4646 MYO6 DFNA22 | DFNB37 myosin VI 6q13 CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5167 ENPP1 ARHR2 | COLED | M6S1 | NPP1 | NPPS | PC-1 | PCA1 | PDNP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 6q22-q23 CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
4602 MYB Cmyb | c-myb | c-myb_CDS | efg MYB proto-oncogene, transcription factor 6q22-q23 CV:PGCnp
PMID:cooccur
2099 ESR1 ER | ESR | ESRA | ESTRR | Era | NR3A1 estrogen receptor 1 6q25.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
Network
PMID:cooccur
23080 AVL9 KIAA0241 AVL9 cell migration associated 7p14.3 CV:PGCnp
DMG:Jaffe_2016
3181 HNRNPA2B1 HNRNPA2 | HNRNPB1 | HNRPA2 | HNRPA2B1 | HNRPB1 | IBMPFD2 | RNPA2 | SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 7p15 CV:PGCnp
1124 CHN2 ARHGAP3 | BCH | CHN2-3 | RHOGAP3 chimerin 2 7p15.3 Association
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
27075 TSPAN13 NET-6 | NET6 | TM4SF13 tetraspanin 13 7 p21.1 CV:PGCnp
DMG:Jaffe_2016
3382 ICA1 ICA69 | ICAp69 islet cell autoantigen 1 7p22 CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
7559 ZNF12 GIOT-3 | HZF11 | KOX3 | ZNF325 zinc finger protein 12 7p22.1 CV:PGCnp
Expression
79034 C7orf26 - chromosome 7 open reading frame 26 7p22.1 CV:PGCnp
84629 TNRC18 CAGL79 | TNRC18A trinucleotide repeat containing 18 7p22.1 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
84132 USP42 - ubiquitin specific peptidase 42 7p22.1 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
57786 RBAK ZNF769 RB associated KRAB zinc finger 7p22.1 CV:PGCnp
DMG:Wockner_2014
3955 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 7p22.2 CV:PGCnp
DMG:Wockner_2014
2768 GNA12 NNX3 | RMP | gep Gprotein subunit alpha 12 7p22.2 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G-PROTEIN RELAY
Ascano FMRP targets
8662 EIF3B EIF3-ETA | EIF3-P110 | EIF3-P116 | EIF3S9 | PRT1 eukaryotic translation initiation factor 3 subunit B 7p22.3 CV:PGCnp
DNM:Guipponi_2014
Ascano FMRP targets
83451 ABHD11 PP1226 | WBSCR21 abhydrolase domain containing 11 7q11.23 CNV:YES
CV:PGCnp
DMG:Nishioka_2013
57541 ZNF398 P51 | P71 | ZER6 zinc finger protein 398 7q36.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
155066 ATP6V0E2 ATP6V0E2L | C7orf32 ATPase H+ transporting V0 subunit e2 7q36.1 CV:PGCnp
DMG:Jaffe_2016
80139 ZNF703 NLZ1 | ZEPPO1 | ZNF503L | ZPO1 zinc finger protein 703 8p11.23 CV:PGCnp
90362 FAM110B C8orf72 family with sequence similarity 110 member B 8q12.1 CV:PGCnp
7227 TRPS1 GC79 | LGCR transcriptional repressor GATA binding 1 8q24.12 CV:PGCnp
64798 DEPTOR DEP.6 | DEPDC6 DEP domain containing MTOR-interacting protein 8q24.12 CV:PGCnp
DMG:Jaffe_2016
50626 CYHR1 CHRP cysteine/histidine-rich 1 8q24.3 CV:PGCnp
DMG:Wockner_2014
83696 TRAPPC9 IBP | IKBKBBP | MRT13 | NIBP | T1 | TRS120 trafficking protein particle complex 9 8q24.3 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
DNM:McCarthy_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
7016 TESK1 - testis-specific kinase 1 9p13 CV:PGCnp
DMG:vanEijk_2014
203197 C9orf91 - chromosome 9 open reading frame 91 9q32 CV:PGCnp
DMG:Jaffe_2016
1955 MEGF9 EGFL5 multiple EGF like domains 9 9q32-q33.3 CV:PGCnp
DMG:Jaffe_2016
23245 ASTN2 bA67K19.1 astrotactin 2 9q33.1 CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
55342 STRBP HEL162 | ILF3L | SPNR | p74 spermatid perinuclear RNA binding protein 9q33.3 CV:PGCnp
DMG:vanEijk_2014
57706 DENND1A FAM31A | KIAA1608 DENN domain containing 1A 9q33.3 CV:PGCnp
CV:PheWAS
9649 RALGPS1 RALGEF2 | RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 9q33.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
84253 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain-like 3 9q33.3 CV:PGCnp CompositeSet
Darnell FMRP targets
10585 POMT1 LGMD2K | MDDGA1 | MDDGB1 | MDDGC1 | RT protein O-mannosyltransferase 1 9q34.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
56654 NPDC1 CAB | CAB- | CAB-1 | CAB1 | NPDC-1 neural proliferation, differentiation and control, 1 9q34.3 DMG:Montano_2016
PMID:cooccur
9919 SEC16A KIAA0310 | SEC16L | p250 SEC16 homolog A, endoplasmic reticulum export factor 9q34.3 CV:PGCnp CompositeSet
Darnell FMRP targets
Ascano FMRP targets
367 AR AIS | AR8 | DHTR | HUMARA | HYSP1 | KD | NR3C4 | SBMA | SMAX1 | TFM androgen receptor Xq12 Association
CV:PGCnp
GO_Annotation
GR_Ng
Network
PMID:cooccur
1741 DLG3 MRX | MRX90 | NEDLG | PPP1R82 | SAP102 | XLMR discs large homolog 3 Xq13.1 CV:PGCnp
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
55558 PLXNA3 6.3 | HSSEXGENE | PLXN3 | PLXN4 | XAP-6 plexin A3 Xq28 CV:PGCnp
DNM:Ambalavanan_2016
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
Potential synaptic genes


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