Search results: The pahtwayp1470has 104 genes in the original annotation. Currently, there are 60 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
10660 LBX1 HPX-6 | HPX6 | LBX1H | homeobox ladybird homeobox 1 10q24 CV:PGCnp
GO_Annotation
7536 SF1 BBP | D11S636 | MBBP | ZCCHC25 | ZFM1 | ZNF162 splicing factor 1 11q13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2017 CTTN EMS1 cortactin 11q13 CV:PGCnp
DMG:Nishioka_2013
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
9986 RCE1 FACE2 | RCE1A | RCE1B Ras converting CAAX endopeptidase 1 11q13 CV:PGCnp
923 CD6 TP120 CD6 molecule 11q13 CV:PGCnp
DMG:vanEijk_2014
2286 FKBP2 FKBP-13 | PPIase FK506 binding protein 2 11q13.1 CV:PGCnp
23130 ATG2A - autophagy related 2A 11q13.1 CV:PGCnp CompositeSet
Darnell FMRP targets
Ascano FMRP targets
283131 NEAT1 LINC00084 | NCRNA00084 | TncRNA | VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) 11q13.1 CV:PGCnp
DMG:Wockner_2014
79703 C11orf80 - chromosome 11 open reading frame 80 11q13.2 CV:PGCnp
116985 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 11q13.4 CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
10443 N4BP2L2 92M18.3 | CG005 | CG016 | PFAAP5 NEDD4 binding protein 2-like 2 13q13.1 CV:PGCnp
DNM:Gulsuner_2013
Expression
55384 MEG3 FP504 | GTL2 | LINC00023 | NCRNA00023 | PRO0518 | PRO2160 | onco-lncRNA-83 | prebp1 maternally expressed 3 (non-protein coding) 14q32 CV:PGCnp
DMG:Wockner_2014
Expression
825 CAPN3 CANP3 | CANPL3 | LGMD2 | LGMD2A | nCL-1 | p94 calpain 3 15q15.1 CV:PGCnp
3073 HEXA TSD hexosaminidase subunit alpha 15q24.1 CV:PGCnp
GO_Annotation
PMID:cooccur
930 CD19 B4 | CVID3 CD19 molecule 16p11.2 GSMA_IIE
PMID:cooccur
5930 RBBP6 MY038 | P2P-R | PACT | RBQ-1 | SNAMA retinoblastoma binding protein 6 16p12.2 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIE
116285 ACSM1 BUCS1 | MACS1 acyl-CoA synthetase medium-chain family member 1 16p12.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
3931 LCAT - lecithin-cholesterol acyltransferase 16q22.1 CV:PGCnp
654780 SFPQ - splicing factor proline/glutamine-rich 16q24.1 CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
9912 ARHGAP44 NPC-A-10 | RICH2 Rho GTPase activating protein 44 17p12 CV:PGCnp
6347 CCL2 GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CF C-C motif chemokine ligand 2 17q11.2-q12 CV:PGCnp
Expression
PMID:cooccur
10614 HEXIM1 CLP1 | EDG1 | HIS1 | MAQ1 hexamethylene bis-acetamide inducible 1 17q21.31 CV:PGCnp
DMG:Jaffe_2016
25794 FSCN2 RFSN | RP30 fascin actin-bundling protein 2, retinal 17q25 CV:PGCnp
933 CD22 SIGLEC-2 | SIGLEC2 CD22 molecule 19q13.1 CV:PGCnp
DMG:Wockner_2014
Network
973 CD79A IGA | MB-1 CD79a molecule 19q13.2 DMG:vanEijk_2014
GO_Annotation
270 AMPD1 MAD | MADA | MMDD adenosine monophosphate deaminase 1 1p13 CV:PGCnp
GSMA_I
GSMA_IIA
6421 SFPQ POMP100 | PPP1R140 | PSF splicing factor proline/glutamine-rich 1p34.3 CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
6004 RGS16 A28-RGS14 | A28-RGS14P | RGS-R regulator of G-protein signaling 16 1q25-q31 CV:PGCnp
Network
PMID:cooccur
27185 DISC1 C1orf136 | SCZD9 disrupted in schizophrenia 1 1q42.1 Association
Core
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
7109 TRAPPC10 EHOC-1 | EHOC1 | GT334 | TMEM1 | TRS130 | TRS30 trafficking protein particle complex 10 21q22.3 DMG:Wockner_2014 CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23544 SEZ6L - seizure related 6 homolog (mouse)-like 22q12.1 CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
9402 GRAP2 迦得| GRAP-2 | GRB2L | GRBLG网格| | GRPL | GrbX| Grf40 | Mona | P38 GRB2-related adaptor protein 2 22q13.2 CV:GWASdb
CV:PGCnp
Network
8440 NCK2 GRB4 | NCKbeta NCK adaptor protein 2 2q12 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Network
2487 FRZB FRE | FRITZ | FRP-3 | FRZB-1 | FRZB-PEN | FRZB1 | FZRB | OS1 | SFRP3 | SRFP3 | hFIZ frizzled-related protein 2q32.1 CV:GWASdb
CV:PGCnp
Expression
316 AOX1 AO | AOH1 aldehyde oxidase 1 2q33 CV:PGCnp
DNM:Fromer_2014
CompositeSet
843 CASP10 ALPS2 | FLICE2 | MCH4 caspase 10 2q33-q34 CV:PGCnp
DMG:Wockner_2014
50853 VILL - villin-like 3p21.3 CV:PGCnp
DMG:Wockner_2014
GSMA_I
7869 SEMA3B LUCA-1 | SEMA5 | SEMAA | SemA | semaV semaphorin 3B 3p21.3 DMG:Wockner_2014
GO_Annotation
5364 PLXNB1 PLEXIN-B1 | PLXN5 | 9月 plexin B1 3p21.31 CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
57493 HEG1 HEG | MST112 | MSTP112 heart development protein with EGF like domains 1 3q21.2 CV:PGCnp
1359 CPA3 MC-CPA carboxypeptidase A3 3q24 CV:PGCnp
2257 FGF12 FGF12B | FHF1 fibroblast growth factor 12 3q28 CV:PGCnp
GO_Annotation
347 APOD - apolipoprotein D 3q29 CV:PGCnp
PMID:cooccur
CompositeSet
952 CD38 ADPRC 1 | ADPRC1 CD38 molecule 4p15 Association
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
729 C6 - complement component 6 5p13 CV:PGCnp
PMID:cooccur
730 C7 - complement component 7 5p13 CV:PGCnp
PMID:cooccur
375449 MAST4 - microtubule associated serine/threonine kinase family member 4 5q12.3 CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3304 HSPA1B HSP70-1B | HSP70-2 | HSP70.2 heat shock protein family A (Hsp70) member 1B 6p21.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
6891 TAP2 ABC18 | ABCB3 | APT2 | D6S217E | PSF-2 | PSF2 | RING11 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) 6p21.3 CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
1577 CYP3A5 CP35 | CYPIIIA5 | P450PCN3 | PCN3 cytochrome P450 family 3 subfamily A member 5 7q21.1 ADT:Sun_2012
CV:PGCnp
PMID:cooccur
1180 CLCN1 CLC1 chloride voltage-gated channel 1 7q35 CV:PGCnp
DNM:Fromer_2014
CompositeSet
7434 VIPR2 C16DUPq36.3 | DUP7q36.3 | PACAP-R-3 | PACAP-R3 | VIP-R-2 | VPAC2 | VPAC2R | VPCAP2R vasoactive intestinal peptide receptor 2 7q36.3 CNV:YES
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5368 PNOC N/OFQ | NOP | OFQ | PPNOC | ppN/OFQ prepronociceptin 8p21 CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
22898 DENND3 - DENN domain containing 3 8q24.3 CV:PGCnp
DMG:Wockner_2014
6366 CCL21 6Ckine | CKb9 | ECL | SCYA21 | SLC | TCA4 C-C motif chemokine ligand 21 9p13 CV:PGCnp
2683 B4GALT1 B4GAL-T1 | CDG2D | GGTB2 | GT1 | GTB | beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 9p13 CV:PGCnp
1029 CDKN2A ARF | CDK4I | CDKN2 | CMM2 | INK4 | INK4A | MLM | MTS-1 | MTS1 | P14 | P14ARF | P16 | P16-INK4A | P16INK4 | P16INK4A | P19 | P19ARF | TP16 cyclin-dependent kinase inhibitor 2A 9p21 CV:PGCnp
DMG:Nishioka_2013
Network
7185 TRAF1 EBI6 | MGC:10353 TNF receptor associated factor 1 9q33-q34 CV:PGCnp
PMID:cooccur
6303 SAT1 DC21 | KFSD | KFSDX | SAT | SSAT | SSAT-1 spermidine/spermine N1-acetyltransferase 1 Xp22.1 CV:PGCnp
PMID:cooccur
Potential synaptic genes
412 STS ARSC | ARSC1 | ASC | ES | SSDD | XLI steroid sulfatase (microsomal), isozyme S Xp22.32 CV:PGCnp
Expression
PMID:cooccur


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