Search results: The pahtwayp1513has 233 genes in the original annotation. Currently, there are 161 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
1316 KLF6 BCD1 | CBA1 | COPEB | CPBP | GBF | PAC1 | ST12 | ZF9 Kruppel-like factor 6 10p15 Association
CV:PGCnp
DMG:Jaffe_2016
1959 EGR2 AT591 | CMT1D | CMT4E | KROX20 early growth response 2 10q21.1 CV:PGCnp
GO_Annotation
PMID:cooccur
9126 SMC3 BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1 structural maintenance of chromosomes 3 10q25 CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
23279 NUP160 - nucleoporin 160kDa 11p11.2 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
960 CD44 CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1 CD44 molecule (Indian blood group) 11p13 CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
10480 EIF3M B5 | GA17 | PCID1 | TANGO7 | hfl-B5 eukaryotic translation initiation factor 3 subunit M 11p13 CV:PGCnp
DMG:Jaffe_2016
6181 RPLP2 D11S2243E | LP2 | P2 | RPP2 ribosomal protein lateral stalk subunit P2 11p15.5 DMG:Wockner_2014
10938 EHD1 H-PAST | HPAST1 | PAST | PAST1 EH domain containing 1 11q13 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
330 BIRC3 AIP1 | API2 | CIAP2 | HAIP1 | HIAP1 | MALT2 | MIHC | RNF49 | c-IAP2 baculoviral IAP repeat containing 3 11q22 CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
23387 SIK3 L19 | QSK | SIK-3 SIK family kinase 3 11q23.3 CV:PGCnp
DMG:Wockner_2014
GSMA_I
53340 SPA17 CT22 | SP17 | SP17-1 sperm autoantigenic protein 17 11q24.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
1111 CHEK1 CHK1 checkpoint kinase 1 11q24.2 CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
3626 INHBC IHBC inhibin beta C 12q13.1 CV:PGCnp
1280 COL2A1 ANFH | AOM | COL11A3 | SEDC | STL1 collagen type II alpha 1 12q13.11 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
552 AVPR1A AVPR V1a | AVPR1 | V1aR arginine vasopressin receptor 1A 12q14.2 CV:PGCnp
PMID:cooccur
22822 PHLDA1 DT1P1B11 | PHRIP | TDAG51 pleckstrin homology like domain family A member 1 12q15 CV:GWASdb
CV:PGCnp
PMID:cooccur
79720 VPS37B - VPS37B, ESCRT-I subunit 12q24.31 CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
DMG:Wockner_2014
6541 SLC7A1 ATRC1 | CAT-1 | ERR | HCAT1 | REC1L solute carrier family 7 member 1 13q12.3 CV:PGCnp
DMG:Wockner_2014
Expression
10253 SPRY2 IGAN3 | hSPRY2 sprouty RTK signaling antagonist 2 13q31.1 CV:PGCnp
PMID:cooccur
23250 ATP11A ATPIH | ATPIS ATPase phospholipid transporting 11A 13q34 CV:PGCnp
DMG:Wockner_2014
Expression
2155 F7 SPCA coagulation factor VII 13q34 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
4792 NFKBIA IKBA | MAD-3 | NFKBI NFKB inhibitor alpha 14q13 CV:GWASdb
CV:PGCnp
Network
10979 FERMT2 KIND2 | MIG2 | PLEKHC1 | UNC112 | UNC112B | mig-2 fermitin family member 2 14q22.1 CV:PGCnp
DMG:Wockner_2014
Expression
677 ZFP36L1 BRF1 | Berg36 | ERF-1 | ERF1 | RNF162B | TIS11B | cMG1 ZFP36 ring finger protein-like 1 14q24.1 CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
2353 FOS AP-1 | C-FOS | p55 FBJ murine osteosarcoma viral oncogene homolog 14q24.3 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
9529 BAG5 BAG-5 BCL2 associated athanogene 5 14q32.33 CV:PGCnp
DMG:Wockner_2014
2038 EPB42 PA | SPH5 erythrocyte membrane protein band 4.2 15q15-q21 CV:PGCnp
Network
2200 FBN1 ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2 fibrillin 1 15q21.1 CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
597 BCL2A1 ACC-1 | ACC-2 | ACC1 | ACC2 | BCL2L5 | BFL1 | GRS | HBPA1 BCL2 related protein A1 15q24.3 CV:GWASdb
CV:PGCnp
11214 AKAP13 AKAP-13 | AKAP-Lbc | ARHGEF13 | BRX | HA-3 | Ht31 | LBC | PRKA13 | PROTO-LB | PROTO-LBC | c-lbc | p47 A-kinase anchoring protein 13 15q25.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
2521 FUS ALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLS FUS RNA binding protein 16p11.2 CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
51327 AHSP EDRF | ERAF alpha hemoglobin stabilizing protein 16p11.2 CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
5595 MAPK3 ERK-1 | ERK1 | ERT2 | HS44KDAP | HUMKER1A | P44ERK1 | P44MAPK | PRKM3 | p44-ERK1 | p44-MAPK mitogen-activated protein kinase 3 16p11.2 CNV:YES
CV:PGCnp
GSMA_IIE
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
6296 ACSM3 SA | SAH acyl-CoA synthetase medium-chain family member 3 16p13.11 CV:PGCnp
GSMA_IIE
1984 EIF5A EIF-5A | EIF5A1 | eIF5AI eukaryotic translation initiation factor 5A 17p13-p12 CV:PGCnp
1107 CHD3 Mi-2a | Mi2-ALPHA | ZFH chromodomain helicase DNA binding protein 3 17p13.1 CV:PGCnp
DMG:Montano_2016
Network
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
9349 RPL23 L23 | rpL17 ribosomal protein L23 17q CV:PGCnp
Network
5717 PSMD11 Rpn6 | S9 | p44.5 26 s蛋白酶体亚基,non-ATPase 11所示 17q11.2 CV:PGCnp
8851 CDK5R1 CDK5P35 | CDK5R | NCK5A | p23 | p25 | p35 | p35nck5a cyclin-dependent kinase 5, regulatory subunit 1 (p35) 17q11.2 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
4763 NF1 NFNS | VRNF | WSS neurofibromin 1 17q11.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6347 CCL2 GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CF C-C motif chemokine ligand 2 17q11.2-q12 CV:PGCnp
Expression
PMID:cooccur
6351 CCL4 ACT2 | AT744.1 | G-26 | HC21 | LAG-1 | LAG1 | MIP-1-beta | MIP1B | MIP1B1 | SCYA2 | SCYA4 C-C motif chemokine ligand 4 17q12 CV:PGCnp
PMID:cooccur
5878 RAB5C L1880 | RAB5CL | RAB5L | RABL RAB5C, member RAS oncogene family 17q21.2 CV:PGCnp
DMG:vanEijk_2014
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
3837 KPNB1 IMB1 | IPO1 | IPOB | Impnb | NTF97 karyopherin subunit beta 1 17q21.32 DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
3759 KCNJ2 ATFB9 | HHBIRK1 | HHIRK1 | IRK1 | KIR2.1 | LQT7 | SQT3 potassium voltage-gated channel subfamily J member 2 17q24.3 CV:PGCnp
DEG:Zhao_2015
Network
59340 HRH4 AXOR35 | BG26 | GPCR105 | GPRv53 | H4 | H4R | HH4R histamine receptor H4 18q11.2 ADT:Sun_2012
CV:PGCnp
PMID:cooccur
6925 TCF4 E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19 transcription factor 4 18q21.1 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
5055 SERPINB2 HsT1201 | PAI | PAI-2 | PAI2 | PLANH2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 18q21.3 DMG:Wockner_2014
GO_Annotation
22850 ADNP2 ZNF508 ADNP homeobox 2 18q23 CV:PGCnp
PMID:cooccur
10365 KLF2 LKLF Kruppel-like factor 2 19p13.11 CV:PGCnp
PMID:cooccur
54815 GATAD2A p66alpha GATA zinc finger domain containing 2A 19p13.11 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Wockner_2014
LK:YES
811 CALR CRT | HEL-S-99n | RO | SSA | cC1qR calreticulin 19p13.13 CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
9592 IER2 ETR101 immediate early response 2 19p13.2 CV:PGCnp
DNM:Fromer_2014
CompositeSet
3383 ICAM1 BB2 | CD54 | P3.58 intercellular adhesion molecule 1 19p13.2 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:McCarthy_2014
3726 JUNB AP-1 jun B proto-oncogene 19p13.2 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23030 KDM4B JMJD2B | TDRD14B lysine demethylase 4B 19p13.3 CV:PGCnp
DMG:Wockner_2014
Expression
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
4616 GADD45B GADD45BETA | MYD118 growth arrest and DNA damage inducible beta 19p13.3 CV:PGCnp
PMID:cooccur
6205 RPS11 S11 ribosomal protein S11 19q13.3 CV:PGCnp
2354 FOSB AP-1 | G0S3 | GOS3 | GOSB FBJ murine osteosarcoma viral oncogene homolog B 19q13.32 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
965 CD58 LFA-3 | LFA3 | ag3 CD58 molecule 1p13 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_I
GSMA_IIA
204851 HIPK1 Myak | Nbak2 homeodomain interacting protein kinase 1 1p13.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
10768 AHCYL1 DCAL | IRBIT | PPP1R78 | PRO0233 | XPVKONA adenosylhomocysteinase like 1 1p13.2 CV:PGCnp
GSMA_I
CompositeSet
2152 F3 CD142 | TF | TFA coagulation factor III, tissue factor 1p22-p21 CV:PGCnp
PMID:cooccur
5142 PDE4B DPDE4 | PDEIVB phosphodiesterase 4B 1p31 Association
CV:GWASdb
CV:PGCnp
GR_Ng
GSMA_IIA
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
51361 HOOK1 HK1 hook microtubule-tethering protein 1 1p32.1 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
10946 SF3A3 PRP9 | PRPF9 | SAP61 | SF3a60 剪接因子3单元3 1p34.3 CV:PGCnp
79693 YRDC DRIP3 | IRIP | SUA5 yrdC N(6)-threonylcarbamoyltransferase domain containing 1p34.3 CV:PGCnp
1104 RCC1 CHC1 | RCC1-I | SNHG3-RCC1 regulator of chromosome condensation 1 1p36.1 CV:PGCnp
DMG:Jaffe_2016
10250 SRRM1 160-KD | POP101 | SRM160 serine and arginine repetitive matrix 1 1p36.11 CV:PGCnp
DMG:Jaffe_2016
2475 MTOR FRAP | FRAP1 | FRAP2 | RAFT1 | RAPT1 | SKS mechanistic target of rapamycin 1p36.2 CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
80176 SPSB1 SSB-1 | SSB1 splA/ryanodine receptor domain and SOCS box containing 1 1p36.22 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
80267 EDEM3 C1orf22 ER degradation enhancer, mannosidase alpha-like 3 1q25 CV:PGCnp
DMG:Wockner_2014
5743 PTGS2 COX-2 | COX2 | GRIPGHS | PGG/HS | PGHS-2 | PHS-2 | hCox-2 prostaglandin-endoperoxide synthase 2 1q25.2-q25.3 Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
51278 IER5 SBBI48 immediate early response 5 1q25.3 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5996 RGS1 1R20 | BL34 | HEL-S-87 | IER1 | IR20 regulator of G-protein signaling 1 1q31 CV:GWASdb
CV:PGCnp
5997 RGS2 G0S8 regulator of G-protein signaling 2 1q31 CV:PGCnp
Network
PMID:cooccur
5287 PIK3C2B C2-PI3K phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 1q32 CV:PGCnp
DNM:Fromer_2014
CompositeSet
7832 BTG2 PC3 | TIS21 BTG family member 2 1q32 CV:PGCnp
PMID:cooccur
25778 DSTYK CAKUT1 | DustyPK | HDCMD38P | RIP5 | RIPK5 dual serine/threonine and tyrosine protein kinase 1q32.1 CV:GWASdb
CV:PGCnp
Ascano FMRP targets
2494 NR5A2 B1F | B1F2 | CPF | FTF | FTZ-F1 | FTZ-F1beta | LRH-1 | LRH1 | hB1F-2 nuclear receptor subfamily 5 group A member 2 1q32.1 CV:PGCnp
DMG:Jaffe_2016
467 ATF3 - activating transcription factor 3 1q32.3 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
90806 ANGEL2 Ccr4d | KIAA0759L 天使同族体2 (Drosophila) 1q32.3 DMG:Nishioka_2013
5629 PROX1 - prospero homeobox 1 1q41 CV:GWASdb
CV:PGCnp
PMID:cooccur
2590 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 1q41-q42 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
2271 FH FMRD | HLRCC | LRCC | MCL | MCUL1 fumarate hydratase 1q42.1 CV:PGCnp
PMID:cooccur
10950 BTG3 ANA | TOB5 | TOB55 | TOFA BTG family member 3 21q21.1 CV:PGCnp
DMG:Jaffe_2016
2114 ETS2 ETS2IT1 ETS proto-oncogene 2, transcription factor 21q22.2 CV:PGCnp
DEG:Zhao_2015
861 RUNX1 AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpha runt related transcription factor 1 21q22.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
3560 IL2RB CD122 | IL15RB | P70-75 interleukin 2 receptor subunit beta 22 q13.1 CV:PGCnp
PMID:cooccur
9402 GRAP2 GADS | GRAP-2 | GRB2L | GRBLG | GRID | GRPL | GrbX | Grf40 | Mona | P38 GRB2-related adaptor protein 2 22 q13.2 CV:GWASdb
CV:PGCnp
Network
3099 HK2 HKII | HXK2 hexokinase 2 2p13 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
23198 PSME4 PA200 proteasome activator subunit 4 2p16.2 CV:PGCnp
80204 FBXO11 FBX11 | PRMT9 | UBR6 | UG063H01 | VIT1 F-box protein 11 2p16.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
23433 RHOQ ARHQ | HEL-S-42 | RASL7A | TC10 | TC10A ras homolog family member Q 2p21 CV:PGCnp
10602 CDC42EP3 BORG2 | CEP3 | UB1 CDC42 effector protein 3 2p21 CV:GWASdb
CV:PGCnp
PMID:cooccur
1545 CYP1B1 CP1B | CYPIB1 | GLC3A | P4501B1 cytochrome P450 family 1 subfamily B member 1 2p22.2 CV:PGCnp G2Cdb.humanPSD
G2Cdb.humanPSP
1844 DUSP2 PAC-1 | PAC1 dual specificity phosphatase 2 2q11 CV:PGCnp
GSMA_I
PMID:cooccur
7850 IL1R2 CD121b | CDw121b | IL-1R-2 | IL-1RT-2 | IL-1RT2 | IL1R2c | IL1RB interleukin 1 receptor type 2 2q12 CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
3552 IL1A IL-1A | IL1 | IL1-ALPHA | IL1F1 interleukin 1 alpha 2q14 Association
CV:GWAScat
CV:GWASdb
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
3553 IL1B IL-1 | IL1-BETA | IL1F2 interleukin 1 beta 2q14 Association
Core
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
Network
PMID:cooccur
3557 IL1RN DIRA | ICIL-1RA | IL-1RN | IL-1ra | IL-1ra3 | IL1F3 | IL1RA | IRAP | MVCD4 interleukin 1 receptor antagonist 2q14.2 Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
4929 NR4A2 HZF-3 | NOT | NURR1 | RNR1 | TINUR nuclear receptor subfamily 4 group A member 2 2q22-q23 Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
PMID:cooccur
7130 TNFAIP6 TSG-6 | TSG6 TNF alpha induced protein 6 2q23.3 CV:PGCnp
GSMA_IIA
8502 PKP4 p0071 plakophilin 4 2q24.1 CV:PGCnp
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
2571 GAD1 CPSQ1 | GAD | SCP glutamate decarboxylase 1 2q31 Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6741 SSB LARP3 | La | La/SSB Sjogren syndrome antigen B 2 q31.1 CV:PGCnp
PMID:cooccur
Ascano FMRP targets
23451 SF3B1 Hsh155 | MDS | PRP10 | PRPF10 | SAP155 | SF3b155 splicing factor 3b subunit 1 2q33.1 CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
Ascano FMRP targets
116987 AGAP1 AGAP-1 | CENTG2 | GGAP1 | cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 2q37 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9779 TBC1D5 - TBC1 domain family member 5 3p24.3 CV:GWASdb
CV:PGCnp
GSMA_I
8971 H1FX H1.10 | H1X H1 histone family member X 3q21.3 CV:PGCnp
DMG:Nishioka_2013
5806 PTX3 TNFAIP5 | TSG-14 pentraxin 3 3q25 PMID:cooccur
3592 IL12A CLMF | IL-12A | NFSK | NKSF1 | P35 interleukin 12A 3q25.33 PMID:cooccur
118 ADD1 ADDA adducin 1 4p16.3 CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
64854 USP46 - ubiquitin specific peptidase 46 4q12 PMID:cooccur
2919 CXCL1 FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1 C-X-C motif chemokine ligand 1 4q21 CV:PGCnp
GO_Annotation
PMID:cooccur
2920 CXCL2 CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2 C-X-C motif chemokine ligand 2 4q21 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2921 CXCL3 CINC-2b | GRO3 | GROg | MIP-2b | MIP2B | SCYB3 C-X-C motif chemokine ligand 3 4q21 CV:PGCnp
DMG:Jaffe_2016
3627 CXCL10 C7 | IFI10 | INP10 | IP-10 | SCYB10 | crg-2 | gIP-10 | mob-1 C-X-C motif chemokine ligand 10 4q21 CV:PGCnp
PMID:cooccur
9429 ABCG2 ABC15 | ABCP | BCRP | BCRP1 | BMDP | CD338 | CDw338 | EST157481 | GOUT1 | MRX | MXR | MXR-1 | MXR1 | UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) 4q22 CV:PGCnp
DMG:Jaffe_2016
5602 MAPK10 JNK3 | JNK3A | PRKM10 | SAPK1b | p493F12 | p54bSAPK mitogen-activated protein kinase 10 4q22.1-q23 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanNRC
Potential synaptic genes
51176 LEF1 LEF-1 | TCF10 | TCF1ALPHA | TCF7L3 lymphoid enhancer binding factor 1 4q25 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
6502 SKP2 FBL1 | FBXL1 | FLB1 | p45 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 5p13 CV:PGCnp
5734 PTGER4 EP4 | EP4R prostaglandin E receptor 4 5p13.1 CV:GWASdb
CV:PGCnp
PMID:cooccur
1601 DAB2 DOC-2 | DOC2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 5p13.1 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
54505 DHX29 DDX29 DEAH-box helicase 29 5q11.2 DMG:Wockner_2014
10769 PLK2 SNK | hPlk2 | hSNK polo like kinase 2 5q12.1-q13.2 CV:PGCnp
22836 RHOBTB3 - Rho related BTB domain containing 3 5q15 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
6558 SLC12A2 BSC | BSC2 | NKCC1 | PPP1R141 solute carrier family 12 member 2 5q23.3 CV:PGCnp
GSMA_I
PMID:cooccur
23176 SEPT8 SEP2 septin 8 5q31 CV:PGCnp
DEG:Maycox_2009
GSMA_I
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1958 EGR1 AT225 | G0S30 | KROX-24 | NGFI-A | TIS8 | ZIF-268 | ZNF225 early growth response 1 5q31.1 CV:PGCnp
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
23305 ACSL6 ACS2 | FACL6 | LACS 6 | LACS2 | LACS5 acyl-CoA synthetase long-chain family member 6 5q31.1 Association
CV:GWASdb
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
929 CD14 - CD14 molecule 5q31.1 CV:PGCnp
DNM:Fromer_2014
GSMA_I
PMID:cooccur
CompositeSet
373863 DND1 RBMS4 DND microRNA-mediated repression inhibitor 1 5q31.3 CV:PGCnp
GSMA_I
23367 LARP1 LARP La ribonucleoprotein domain family member 1 5q33.2 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
8992 ATP6V0E1 ATP6H | ATP6V0E | M9.2 | Vma21 | Vma21p ATPase H+ transporting V0 subunit e1 5q35.1 CV:PGCnp
GSMA_IIA
2729 GCLC GCL | GCS | GLCL | GLCLC glutamate-cysteine ligase catalytic subunit 6p12 CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
1026 CDKN1A CAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1 cyclin-dependent kinase inhibitor 1A 6p21.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
8870 IER3 DIF-2 | DIF2 | GLY96 | IEX-1 | IEX-1L | IEX1 | PRG1 immediate early response 3 6p21.3 CV:PGCnp
DMG:Wockner_2014
GSMA_I
7124 TNF DIF | TNF-alpha | TNFA | TNFSF2 | TNLG1F tumor necrosis factor 6p21.3 Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
9308 CD83 BL11 | HB15 CD83 molecule 6p23 CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
7020 TFAP2A AP-2 | AP-2alpha | AP2TF | BOFS | TFAP2 transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 6p24 CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
6446 SGK1 SGK serum/glucocorticoid regulated kinase 1 6q23 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
7128 TNFAIP3 A20 | AISBL | OTUD7C | TNFA1P2 TNF alpha induced protein 3 6q23 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
6648 SOD2 IPOB | MNSOD | MVCD6 superoxide dismutase 2, mitochondrial 6q25.3 Association
CV:PGCnp
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
3569 IL6 BSF-2 | BSF2 | CDF | HGF | HSF | IFN-beta-2 | IFNB2 | IL-6 interleukin 6 7p21 CV:GWASdb
CV:PGCnp
PMID:cooccur
10124 ARL4A ARL4 ADP ribosylation factor like GTPase 4A 7p21.3 CV:PGCnp
9678 PHF14 - PHD finger protein 14 7p21.3 CV:PGCnp Ascano FMRP targets
23089 PEG10 EDR | HB-1 | MEF3L | Mar2 | Mart2 | RGAG3 paternally expressed 10 7q21 CV:PGCnp
DMG:Nishioka_2013
3082 HGF DFNB39 | F-TCF | HGFB | HPTA | SF hepatocyte growth factor 7q21.1 CV:PGCnp
GO_Annotation
PMID:cooccur
80223 RAB11FIP1 NOEL1A | RCP | rab11-FIP1 RAB11 family interacting protein 1 (class I) 8p11.22 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
1960 EGR3 EGR-3 | PILOT early growth response 3 8p23-p21 Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4856 NOV CCN3 | IBP-9 | IGFBP-9 | IGFBP9 | NOVh nephroblastoma overexpressed 8q24.1 PMID:cooccur
10221 TRIB1 C8FW | GIG-2 | GIG2 | SKIP1 | TRB-1 | TRB1 tribbles pseudokinase 1 8q24.13 CV:PGCnp
DMG:Jaffe_2016
1936 EEF1D EF-1D | EF1D | FP1047 eukaryotic translation elongation factor 1 delta 8q24.3 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
CompositeSet
1306 COL15A1 - collagen type XV alpha 1 9q21-q22 CV:PGCnp
DNM:Fromer_2014
CompositeSet
216 ALDH1A1 ALDC | ALDH-E1 | ALDH1 | ALDH11 | HEL-9 | HEL-S-53e | HEL12 | PUMB1 | RALDH1 aldehyde dehydrogenase 1 family member A1 9q21.13 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
7091 TLE4 BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4 transducin like enhancer of split 4 9q21.31 CV:PGCnp
DMG:Jaffe_2016
9314 KLF4 EZF | GKLF Kruppel-like factor 4 (gut) 9q31 CV:PGCnp
PMID:cooccur
Ascano FMRP targets
4957 ODF2 CT134 | ODF2/1 | ODF2/2 | ODF84 outer dense fiber of sperm tails 2 9q34.11 DMG:vanEijk_2014
4129 MAOB - monoamine oxidase B Xp11.23 CV:PGCnp
GO_Annotation
PMID:cooccur
DOPAMINE
NEUROTRANSMITTER METABOLISM
SEROTONIN
CompositeSet
Potential synaptic genes
10682 EBP CDPX2 | CHO2 | CPX | CPXD | MEND emopamil binding protein (sterol isomerase) Xp11.23-p11.22 CV:PGCnp
PMID:cooccur


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