Search results: The pahtwayp1514has 275 genes in the original annotation. Currently, there are 168 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
79896 THNSL1 TSH1 threonine synthase like 1 10p12.1 CV:PGCnp
80013 FAM188A C10orf97 | CARP | DERP5 | MST126 | MSTP126 | my042 family with sequence similarity 188 member A 10p13 CV:PGCnp
DMG:Jaffe_2016
7321 UBE2D1 E2(17)KB1 | SFT | UBC4/5 | UBCH5 | UBCH5A ubiquitin conjugating enzyme E2 D1 10 q21.1 CV:PGCnp
PMID:cooccur
79009 DDX50 GU2 | GUB | RH-II/GuB | mcdrh DEAD-box helicase 50 10q22.1 CV:PGCnp
55328 RNLS C10orf59 | RENALASE renalase, FAD-dependent amine oxidase 10q23.31 CV:GWASdb
CV:PGCnp
4601 MXI1 MAD2 | MXD2 | MXI | bHLHc11 MAX interactor 1, dimerization protein 10q24-q25 CV:GWASdb
CV:PGCnp
79591 C10orf76 - chromosome 10 open reading frame 76 10q24.32 CV:PGCnp
6001 RGS10 - regulator of G-protein signaling 10 10 q25 CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
23172 FAM175B ABRO1 | KIAA0157 family with sequence similarity 175 member B 10 q26.13 CV:GWASdb
CV:PGCnp
664 BNIP3 NIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 10q26.3 CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_IIA
22800 RRAS2 TC21 RAS相关病毒致癌基因相同器官(r-ras)2 11p15.2 CV:PGCnp
DMG:Wockner_2014
10077 TSPAN32 ART1 | PHEMX | PHMX | TSSC6 tetraspanin 32 11p15.5 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
57804 POLD4 POLDS | p12 polymerase (DNA) delta 4, accessory subunit 11q13 PMID:cooccur
595 CCND1 BCL1 | D11S287E | PRAD1 | U21B31 cyclin D1 11q13 DMG:Jaffe_2016
Network
PMID:cooccur
23235 SIK2 LOH11CR1I | QIK | SIK-2 | SNF1LK2 salt inducible kinase 2 11q23.1 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
Ascano FMRP targets
399979 SNX19 CHET8 sorting nexin 19 11q25 CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
DNM:Guipponi_2014
LK:YES
PMID:cooccur
4033 LRMP JAW1 lymphoid restricted membrane protein 12p12.1 CV:PGCnp
7167 TPI1 HEL-S-49 | TIM | TPI | TPID triosephosphate isomerase 1 12p13 Expression
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6515 SLC2A3 GLUT3 solute carrier family 2 member 3 12p13.3 CV:PGCnp
PMID:cooccur
CELL METABOLISM
928 CD9 BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29 CD9 molecule 12p13.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5800 PTPRO GLEPP1 | NPHS6 | PTP-OC | PTP-U2 | PTPROT | PTPU2 | R-PTP-O protein tyrosine phosphatase, receptor type O 12p13.3-p13.2|12p13-p12 CV:GWAScat
CV:PGCnp
PMID:cooccur
5787 PTPRB HPTP-BETA | HPTPB | PTPB | R-PTP-BETA | VEPTP protein tyrosine phosphatase, receptor type B 12q15 CV:GWASdb
CV:PGCnp
217 ALDH2 ALDH-E2 | ALDHI | ALDM aldehyde dehydrogenase 2 family (mitochondrial) 12q24.2 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
CompositeSet
23389 MED13L MRFACD | PROSIT240 | THRAP2 | TRAP240L mediator complex subunit 13 like 12q24.21 CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
51433 ANAPC5 APC5 anaphase promoting complex subunit 5 12q24.31 CV:PGCnp
DNM:Fromer_2014
CompositeSet
9617 MTRF1 MRF1 | MTTRF1 | RF1 mitochondrial translational release factor 1 13q14.1-q14.3 CV:PGCnp
PMID:cooccur
112399 EGLN3 HIFP4H3 | HIFPH3 | PHD3 egl-9 family hypoxia-inducible factor 3 14q13.1 CV:GWASdb
CV:PGCnp
GSMA_I
6655 SOS2 NS9 SOS Ras/Rho guanine nucleotide exchange factor 2 14q21 CV:PGCnp
DNM:Gulsuner_2013
11183 MAP4K5 GCKR | KHS | KHS1 | MAPKKKK5 mitogen-activated protein kinase kinase kinase kinase 5 14q22.1 CV:PGCnp
22890 ZBTB1 ZNF909 zinc finger and BTB domain containing 1 14q23.3 CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
440193 CCDC88C DAPLE | HKRP2 | KIAA1509 | SCA40 coiled-coil domain containing 88C 14q32.11 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
51621 KLF13 BTEB3 | FKLF2 | NSLP1 | RFLAT-1 | RFLAT1 Kruppel-like factor 13 15q12 CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
7057 THBS1 THBS | THBS-1 | TSP | TSP-1 | TSP1 thrombospondin 1 15q15 CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
29766 TMOD3 UTMOD tropomodulin 3 15q21.2 CV:PGCnp
DMG:Jaffe_2016
23060 ZNF609 - zinc finger protein 609 15q22.31 CV:PGCnp
DMG:Wockner_2014
Expression
53346 TM6SF1 - transmembrane 6 superfamily member 1 15q24-q26 CV:PGCnp
4205 MEF2A ADCAD1 | RSRFC4 | RSRFC9 | mef2 myocyte enhancer factor 2A 15q26 CV:PGCnp
PMID:cooccur
8651 SOCS1 CIS1 | CISH1 | JAB | SOCS-1 | SSI-1 | SSI1 | TIP3 suppressor of cytokine signaling 1 16p13.13 CV:PGCnp
DMG:Nishioka_2013
1540 CYLD BRSS | CDMT | CYLD1 | CYLDI | EAC | MFT | MFT1 | SBS | TEM | USPL2 CYLD lysine 63 deubiquitinase 16q12.1 CV:PGCnp
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
4493 MT1E MT-1E | MT-IE | MT1 | MTD metallothionein 1E 16q13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4496 MT1H MT-0 | MT-1H | MT-IH | MT1 metallothionein 1H 16q13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4501 MT1X MT-1l | MT1 metallothionein 1X 16q13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4502 MT2A MT2 metallothionein 2A 16q13 CV:PGCnp
PMID:cooccur
267 AMFR GP78 | RNF45 autocrine motility factor receptor, E3 ubiquitin protein ligase 16q21 CV:PGCnp
DMG:Jaffe_2016
10204 NUTF2 NTF2 | PP15 nuclear transport factor 2 16q22.1 CV:PGCnp
54971 BANP BEND1 | SMAR1 | SMARBP1 BTG3 associated nuclear protein 16q24 CV:PGCnp
DMG:Wockner_2014
Expression
29123 ANKRD11 ANCO-1 | ANCO1 | LZ16 | T13 ankyrin repeat domain 11 16q24.3 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
230 ALDOC ALDC aldolase, fructose-bisphosphate C 17cen-q12 PMID:cooccur G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1984 EIF5A EIF-5A | EIF5A1 | eIF5AI eukaryotic translation initiation factor 5A 17p13-p12 CV:PGCnp
5176 SERPINF1 EPC-1 | OI12 | OI6 | PEDF | PIG35 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 17p13.3 CV:PGCnp
GO_Annotation
51701 NLK - nemo-like kinase 17q11.2 CV:PGCnp
2535 FZD2 Fz2 | fz-2 | fzE2 | hFz2 frizzled class receptor 2 17q21.31 CV:PGCnp
DMG:Jaffe_2016
9256 BZRAP1 PBR-IP | PRAX-1 | PRAX1 | RIM-BP1 | RIMBP1 benzodiazepine receptor (peripheral) associated protein 1 17q22 CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Fromer_2014
GPCR SIGNALLING
CompositeSet
Darnell FMRP targets
8288 EPX EPO | EPP | EPX-PEN | EPXD eosinophil peroxidase 17q23.1 CV:PGCnp
10513 APPBP2 APP-BP2 | HS.84084 | PAT1 amyloid beta precursor protein binding protein 2 17q23.2 CV:PGCnp
DMG:Jaffe_2016
9123 SLC16A3 MCT 3 | MCT 4 | MCT-3 | MCT-4 | MCT3 | MCT4 solute carrier family 16 member 3 17q25 CV:PGCnp
DMG:Wockner_2014
3959 LGALS3BP 90K | BTBD17B | CyCAP | M2BP | MAC-2-BP | TANGO10B | gp90 lectin, galactoside-binding, soluble, 3 binding protein 17q25 CV:PGCnp
DMG:vanEijk_2014
439921 MXRA7 PS1TP1 | TMAP1 matrix-remodelling associated 7 17q25.1 CV:PGCnp
DMG:Wockner_2014
124583 CANT1 DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPY calcium activated nucleotidase 1 17q25.3 CV:PGCnp
23253 ANKRD12 ANCO-2 | ANCO1 | GAC-1 | Nbla00144 ankyrin repeat domain 12 18p11.22 CV:GWASdb
CV:PGCnp
8780 RIOK3 SUDD 里约热内卢kinase 3 18q11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
10982 MAPRE2 CSCSC2 | EB1 | EB2 | RP1 microtubule associated protein RP/EB family member 2 18q12.1 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
374868 ATP9B ATPASEP | ATPIIB | HUSSY-20 | NEO1L | hMMR1 ATPase phospholipid transporting 9B (putative) 18q23 CV:PGCnp
81931 ZNF93 HPF34 | HTF34 | TF34 | ZNF505 zinc finger protein 93 19p12 CV:PGCnp
CV:PheWAS
8178 ELL C19orf17 | ELL1 | MEN | PPP1R68 elongation factor for RNA polymerase II 19p13.1 CV:PGCnp
1675 CFD ADIPSIN | ADN | DF | PFD complement factor D (adipsin) 19p13.3 CV:PGCnp
GO_Annotation
PMID:cooccur
8943 AP3D1 ADTD | hBLVR adaptor related protein complex 3 delta 1 subunit 19p13.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5329 PLAUR CD87 | U-PAR | UPAR | URKR plasminogen activator, urokinase receptor 19q13 CV:PGCnp
PMID:cooccur
558 AXL ARK | JTK11 | Tyro7 | UFO AXL receptor tyrosine kinase 19q13.1 CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
55900 ZNF302 HSD16 | MST154 | MSTP154 | ZNF135L | ZNF140L | ZNF327 zinc finger protein 302 19q13.11 CV:PGCnp
DMG:Jaffe_2016
2901 GRIK5 EAA2 | GRIK2 | GluK5 | KA2 glutamate ionotropic receptor kainate type subunit 5 19q13.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
22809 ATF5 ATFX | HMFN0395 activating transcription factor 5 19q13.3 CV:PGCnp
PMID:cooccur
57787 MARK4 MARK4L | MARK4S | MARKL1 | MARKL1L | PAR-1D microtubule affinity regulating kinase 4 19q13.3 CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
581 BAX BCL2L4 BCL2-associated X protein 19q13.3-q13.4 GO_Annotation
PMID:cooccur
6237 RRAS - RAS相关病毒致癌基因相同器官(r-ras) 19q13.33 CV:PGCnp
DMG:Wockner_2014
65982 ZSCAN18 ZNF447 zinc finger and SCAN domain containing 18 19q13.43 CV:PGCnp
DMG:Jaffe_2016
1629 DBT BCATE2 | BCKAD-E2 | BCKADE2 | BCOADC-E2 | E2 | E2B dihydrolipoamide branched chain transacylase E2 1p31 CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
10561 IFI44 MTAP44 | TLDC5 | p44 interferon induced protein 44 1p31.1 CV:PGCnp
GSMA_IIA
1647 GADD45A DDIT1 | GADD45 growth arrest and DNA damage inducible alpha 1p31.2 CV:GWASdb
CV:PGCnp
GSMA_IIA
26292 MYCBP AMY-1 MYC binding protein 1p33-p32.2 DMG:Nishioka_2013
54955 C1orf109 - chromosome 1 open reading frame 109 1p34.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5724 PTAFR PAFR platelet activating factor receptor 1p35-p34.3 CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
64766 S100PBP S100PBPR S100P binding protein 1p35.1 CV:PGCnp
23013 SPEN HIAA0929 | MINT | RBM15C | SHARP spen family transcriptional repressor 1p36 CV:PGCnp
DMG:Nishioka_2013
CompositeSet
Darnell FMRP targets
10628 TXNIP EST01027 | HHCPA78 | THIF | VDUP1 thioredoxin interacting protein 1q21.1 CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
79630 C1orf54 - chromosome 1 open reading frame 54 1q21.2 CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
3310 HSPA6 HSP70B” heat shock protein family A (Hsp70) member 6 1q23 CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CompositeSet
23215 PRRC2C BAT2-iso | BAT2D1 | BAT2L2 | XTP2 proline rich coiled-coil 2C 1q23.3 CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
8674 VAMP4 VAMP-4 | VAMP24 vesicle associated membrane protein 4 1 q24-q25 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
EXOCYTOSIS
27101 CACYBP GIG5 | PNAS-107 | S100A6BP | SIP calcyclin binding protein 1 q24-q25 CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
5451 POU2F1 OCT1 | OTF1 | oct-1B POU class 2 homeobox 1 1 q24.2 CV:PGCnp
DMG:Wockner_2014
9887 SMG7 C1orf16 | EST1C | SGA56M SMG7 nonsense mediated mRNA decay factor 1q25 CV:PGCnp
DMG:Jaffe_2016
7175 TPR - translocated promoter region, nuclear basket protein 1q25 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Ascano FMRP targets
1378 CR1 C3BR | C4BR | CD35 | KN complement component 3b/4b receptor 1 (Knops blood group) 1q32 CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
10765 KDM5B CT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1 lysine demethylase 5B 1q32.1 CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
25782 RAB3GAP2 RAB3-GAP150 | RAB3GAP150 | SPG69 | WARBM2 | p150 RAB3 GTPase activating non-catalytic protein subunit 2 1q41 CV:PGCnp
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2058 EPRS EARS | GLUPRORS | PARS | PIG32 | QARS | QPRS glutamyl-prolyl-tRNA synthetase 1q41 GO_Annotation
Network
PMID:cooccur
CompositeSet
Ascano FMRP targets
6431 SRSF6 B52 | HEL-S-91 | SFRS6 | SRP55 serine/arginine-rich splicing factor 6 20q12-q13.1 CV:PGCnp
Expression
6227 RPS21 HLDF | S21 ribosomal protein S21 20q13.3 CV:PGCnp
DMG:Nishioka_2013
2778 GNAS AHO | C20orf45 | GNAS1 | GPSA | GSA | GSP | NESP | POH | SCG6 | SgVI GNAS complex locus 20q13.3 Association
CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
DOPAMINE
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
4685 NCAM2 NCAM21 neural cell adhesion molecule 2 21q21.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
351 APP AAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN-II | PN2 amyloid beta precursor protein 21q21.3 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
54014 BRWD1 C21orf107 | DCAF19 | N143 | WDR9 bromodomain and WD repeat domain containing 1 21q22.2 CV:PGCnp
DEG:Sanders_2013
DMG:Nishioka_2013
Expression
25825 BACE2 AEPLC | ALP56 | ASP1 | ASP21 | BAE2 | CDA13 | CEAP1 | DRAP beta-site APP-cleaving enzyme 2 21q22.3 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
25828 TXN2 COXPD29 | MT-TRX | MTRX | TRX2 thioredoxin 2 22q13.1 CV:PGCnp
10521 DDX17 P72 | RH70 DEAD-box helicase 17 22q13.1 CV:PGCnp
DMG:Nishioka_2013
10097 ACTR2 ARP2 ARP2 actin-related protein 2 homolog (yeast) 2好 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
10746 MAP3K2 MEKK2 | MEKK2B mitogen-activated protein kinase kinase kinase 2 2q14.3 GSMA_I
GSMA_IIA
6335 SCN9A ETHA | FEB3B | GEFSP7 | HSAN2D | NE-NA | NENA | Nav1.7 | PN1 | SFNP sodium voltage-gated channel alpha subunit 9 2q24 CV:PGCnp
GSMA_IIA
EXCITABILITY
2591 GALNT3 GalNAc-T3 | HFTC | HHS polypeptide N-acetylgalactosaminyltransferase 3 2q24-q31 CV:PGCnp
GSMA_IIA
8502 PKP4 p0071 plakophilin 4 2q24.1 CV:PGCnp
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
9874 TLK1 PKU-beta tousled like kinase 1 2 q31.1 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
841 CASP8 ALPS2B | CAP4 | Casp-8 | FLICE | MACH | MCH5 caspase 8 2q33-q34 CV:GWASdb
CV:PGCnp
1385 CREB1 CREB | CREB-1 cAMP responsive element binding protein 1 2q34 CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
7145 TNS1 MST091 | MST122 | MST127 | MSTP091 | MSTP122 | MSTP127 | MXRA6 | PPP1R155 | TNS tensin 1 2q35-q36 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
3267 AGFG1 HRB | RAB | RIP ArfGAP with FG repeats 1 2q36.3 CV:PGCnp
11262 SP140 LYSP100 | LYSP100-A | LYSP100-B SP140 nuclear body protein 2q37.1 CV:PGCnp
9208 LRRFIP1 FLAP-1 | FLAP1 | FLIIAP1 | GCF-2 | GCF2 | HUFI-1 | TRIP leucine rich repeat (in FLII) interacting protein 1 2q37.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
1524 CX3CR1 CCRL1 | CMKBRL1 | CMKDR1 | GPR13 | GPRV28 | V28 C-X3-C motif chemokine receptor 1 3p21.3 CV:PGCnp
PMID:cooccur
729230 CCR2 CC-CKR-2 | CCR-2 | CCR2A | CCR2B | CD192 | CKR2 | CKR2A | CKR2B | CMKBR2 | MCP-1-R C-C motif chemokine receptor 2 3p21.31 CV:PGCnp
PMID:cooccur
79718 TBL1XR1 C21 | DC42 | IRA1 | TBLR1 transducin (beta)-like 1 X-linked receptor 1 3q26.32 CV:GWASdb
CV:PGCnp
5062 PAK2 PAK65 | PAKgamma p21 protein (Cdc42/Rac)-activated kinase 2 3q29 CNV:YES
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
6286 S100P MIG9 S100 calcium binding protein P 4p16 CV:PGCnp
DMG:Jaffe_2016
22915 MMRN1 ECM | EMILIN4 | GPIa* | MMRN multimerin 1 4q22 CV:PGCnp
6696 SPP1 BNSP | BSPI | ETA-1 | OPN secreted phosphoprotein 1 4q22.1 CV:PGCnp
CV:PheWAS
10144 FAM13A ARHGAP48 | FAM13A1 family with sequence similarity 13 member A 4q22.1 CV:GWAScat
CV:PGCnp
CV:PheWAS
Ascano FMRP targets
8649 LAMTOR3 MAP2K1IP1 | MAPBP | MAPKSP1 | MP1 | PRO0633 | Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 4q23 CV:PGCnp
84162 KIAA1109 FSA | Tweek KIAA1109 4q27 CV:PGCnp
DNM:Gulsuner_2013
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
54726 OTUD4 DUBA6 | HIN1 | HSHIN1 OTU deubiquitinase 4 4q31.21 CV:PGCnp
DMG:Jaffe_2016
2982 GUCY1A3 GC-SA3 | GUC1A3 | GUCA3 | GUCSA3 | GUCY1A1 | MYMY6 guanylate cyclase 1, soluble, alpha 3 4q32.1 CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
51663 ZFR SPG71 | ZFR1 zinc finger RNA binding protein 5p13.3 CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
4214 MAP3K1 MAPKKK1 | MEKK | MEKK 1 | MEKK1 | SRXY6 mitogen-activated protein kinase kinase kinase 1 5q11.2 CV:PGCnp
DMG:Montano_2016
Network
51752 ERAP1 A-LAP | ALAP | APPILS | ARTS-1 | ARTS1 | ERAAP | ERAAP1 | PILS-AP | PILSAP endoplasmic reticulum aminopeptidase 1 5q15 CV:PGCnp
DMG:Jaffe_2016
7903 ST8SIA4 PST | PST1 | SIAT8D | ST8SIA-IV ST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 4 5q21 CV:PGCnp
GO_Annotation
PMID:cooccur
9140 ATG12 APG12 | APG12L | FBR93 | HAPG12 autophagy related 12 5q21-q22 CV:PGCnp
DNM:Fromer_2014
CompositeSet
8974 P4HA2 - prolyl 4-hydroxylase subunit alpha 2 5q31 CV:PGCnp
DMG:Wockner_2014
GSMA_I
9555 H2AFY H2A.y | H2A/y | H2AF12M | MACROH2A1.1 | mH2A1 | macroH2A1.2 H2A histone family member Y 5q31.1 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8614 STC2 STC-2 | STCRP stanniocalcin 2 5q35.1 CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
192286 HIGD2A RCF1b HIG1 hypoxia inducible domain family member 2A 5q35.2 GSMA_IIA
3187 HNRNPH1 HNRPH | HNRPH1 | hnRNPH heterogeneous nuclear ribonucleoprotein H1 (H) 5q35.3 CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
55227 LRRC1 LANO | dJ523E19.1 leucine rich repeat containing 1 6p12.1 CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GSMA_IIE
4594 MUT MCM methylmalonyl-CoA mutase 6p12.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_IIE
PMID:cooccur
9753 ZSCAN12 ZFP96 | ZNF29K1 | ZNF305 | ZNF96 | dJ29K1.2 zinc finger and SCAN domain containing 12 6p21 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
23304 UBR2 C6orf133 | bA49A4.1 | dJ242G1.1 | dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 6p21.1 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
63940 GPSM3 AGS4 | C6orf9 | G18 | G18.1a | G18.1b | G18.2 | NG1 G-protein signaling modulator 3 6p21.3 CV:GWASdb
CV:PGCnp
GSMA_I
28973 MRPS18B C6orf14 | HSPC183 | HumanS18a | MRP-S18-2 | MRPS18-2 | PTD017 | S18amt mitochondrial ribosomal protein S18B 6p21.3 DMG:Jaffe_2016
GSMA_I
8364 HIST1H4C H4/g | H4FG | dJ221C16.1 histone cluster 1, H4c 6p22.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
54901 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 6p22.3 CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_I
51389 RWDD1 CGI-24 | PTD013 RWD domain containing 1 6q13-q22.33 CV:GWASdb
CV:PGCnp
5238 PGM3 AGM1 | IMD23 | PAGM | PGM 3 phosphoglucomutase 3 6q14.1-q15 CV:PGCnp
58528 RRAGD RAGD | bA11D8.2.1 Ras related GTP binding D 6q15 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
22881 ANKRD6 - ankyrin repeat domain 6 6q15 CV:PGCnp
DMG:Wockner_2014
440 ASNS ASNSD | TS11 asparagine synthetase (glutamine-hydrolyzing) 7q21.3 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
6718 AKR1D1 3o5bred | CBAS2 | SRD5B1 aldo-keto reductase family 1, member D1 7q32-q33 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
800 CALD1 CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22 caldesmon 1 7q33 CV:PGCnp
DMG:Wockner_2014
Expression
Network
835 CASP2 CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57 caspase 2 7q34-q35 CV:PGCnp
138050 HGSNAT HGNAT | MPS3C | RP73 | TMEM76 heparan-alpha-glucosaminide N-acetyltransferase 8p11.1 CV:PGCnp
5108 PCM1 PTC4 | RET/PCM-1 pericentriolar material 1 8p22-p21.3 Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
Ascano FMRP targets
55284 UBE2W UBC-16 | UBC16 ubiquitin conjugating enzyme E2 W (putative) 8q21.11 CV:PGCnp
DMG:Jaffe_2016
5375 PMP2 FABP8 | M-FABP | MP2 | P2 peripheral myelin protein 2 8q21.3-q22.1 CV:PGCnp
PMID:cooccur
9134 CCNE2 CYCE2 cyclin E2 8q22.1 DMG:Jaffe_2016
7016 TESK1 - testis-specific kinase 1 9p13 CV:PGCnp
DMG:vanEijk_2014
8434 RECK ST15 reversion inducing cysteine rich protein with kazal motifs 9p13.3 CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
80173 IFT74 CCDC2 | CMG-1 | CMG1 intraflagellar transport 74 9p21.2 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
7436 VLDLR CAMRQ1 | CARMQ1 | CHRMQ1 | VLDLRCH very low density lipoprotein receptor 9p24 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
4781 NFIB CTF | HMGIC/NFIB | NF-I/B | NF1-B | NFI-B | NFI-RED | NFIB2 | NFIB3 nuclear factor I/B 9p24.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
7357 UGCG GCS | GLCT1 UDP-glucose ceramide glucosyltransferase 9q31 CV:PGCnp
3561 IL2RG CD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1 interleukin 2 receptor subunit gamma Xq13.1 PMID:cooccur


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