Search results: The pahtwayp1558has 276 genes in the original annotation. Currently, there are 165 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
657 BMPR1A 10q23del | ACVRLK3 | ALK3 | CD292 | SKR5 bone morphogenetic protein receptor type 1A 10q22.3 CV:PGCnp
3416 IDE INSULYSIN insulin degrading enzyme 10q23-q25 CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
27069 GHITM DERP2 | HSPC282 | MICS1 | My021 | PTD010 | TMBIM5 growth hormone inducible transmembrane protein 10q23.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8038 ADAM12 ADAM12-OT1 | CAR10 | MCMP | MCMPMltna | MLTN | MLTNA ADAM metallopeptidase domain 12 10q26 CV:PGCnp
GSMA_IIA
PMID:cooccur
5654 HTRA1 ARMD7 | CADASIL2 | CARASIL | HtrA | L56 | ORF480 | PRSS11 HtrA serine peptidase 1 10q26.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
4607 MYBPC3 CMD1MM | CMH4 | FHC | LVNC10 | MYBP-C myosin binding protein C, cardiac 11p11.2 CV:PGCnp
5913 RAPSN CMS11 | CMS4C | FADS | RAPSYN | RNF205 receptor associated protein of the synapse 11p11.2 CV:PGCnp
GO_Annotation
7189 TRAF6 MGC:3310 | RNF85 TNF receptor associated factor 6 11p12 CV:PGCnp
GO_Annotation
Network
847 CAT - catalase 11p13 CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
3992 FADS1 D5D | FADS6 | FADSD5 | LLCDL1 | TU12 fatty acid desaturase 1 11q12.2-q13.1 DEG:Sanders_2013
PMID:cooccur
5331 PLCB3 - phospholipase C beta 3 11q13 CV:PGCnp
DMG:Wockner_2014
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
472 ATM AT1 | ATA | ATC | ATD | ATDC | ATE | TEL1 | TELO1 ATM serine/threonine kinase 11q22-q23 CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Ascano FMRP targets
80071 CCDC15 - coiled-coil domain containing 15 11q24.2 CV:PGCnp
65981 CAPRIN2 C1QDC1 | EEG-1 | EEG1 | RNG140 caprin family member 2 12p11 CV:PGCnp
5139 PDE3A CGI-PDE | CGI-PDE A | CGI-PDE-A | HTNB phosphodiesterase 3A 12p12 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
65125 WNK1 HSAN2 | HSN2 | KDP | PPP1R167 | PRKWNK1 | PSK | p65 WNK lysine deficient protein kinase 1 12p13.3 CV:PGCnp
DEG:Maycox_2009
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
25840 METTL7A AAM-B methyltransferase like 7A 12q13.12 CV:PGCnp
DEG:Zhao_2015
Expression
8092 ALX1 CART1 | FND3 | HEL23 ALX homeobox 1 12q21.31 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5781 PTPN11 BPTP3 | CFC | JMML | METCDS | NS1 | PTP-1D | PTP2C | SH-PTP2 | SH-PTP3 | SHP2 protein tyrosine phosphatase, non-receptor type 11 12q24 CV:PGCnp
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10993 SDS SDH serine dehydratase 12q24.13 CV:PGCnp
PMID:cooccur
79676 OGFOD2 - 2-oxoglutarate and iron dependent oxygenase domain containing 2 12q24.31 CV:PGCnp
LK:YES
10186 LHFP - lipoma HMGIC fusion partner 13q12 CV:PGCnp
DMG:Nishioka_2013
54737 MPHOSPH8 HSMPP8 | TWA3 | mpp8 M-phase phosphoprotein 8 13q12.11 CV:PGCnp
DMG:Jaffe_2016
283537 SLC46A3 FKSG16 solute carrier family 46 member 3 13q12.3 CV:PGCnp
DMG:Jaffe_2016
23047 PDS5B APRIN | AS3 | CG008 PDS5 cohesin associated factor B 13q12.3 CV:PGCnp CompositeSet
Darnell FMRP targets
10129 FRY 13CDNA73 | 214K23.2 | C13orf14 | CG003 | bA207N4.2 | bA37E23.1 FRY microtubule binding protein 13q13.1 CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
10150 MBNL2 MBLL | MBLL39 | PRO2032 muscleblind like splicing regulator 2 13q32.1 CV:GWASdb
CV:PGCnp
23348 DOCK9 ZIZ1 | ZIZIMIN1 dedicator of cytokinesis 9 13q32.3 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5911 RAP2A K-REV | KREV | RAP2 | RbBP-30 RAP2A, member of RAS oncogene family 13q34 CV:PGCnp
DMG:Jaffe_2016
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
10876 EDDM3A EP3A | FAM12A | HE3-ALPHA | HE3A | HE3ALPHA | RAM1 epididymal protein 3A 14q11.2 CV:GWASdb
CV:PGCnp
GSMA_I
64582 GPR135 HUMNPIIY20 G protein-coupled receptor 135 14q23.1 CV:PGCnp
4990 SIX6 MCOPCT2 | ODRMD | OPTX2 | Six9 SIX homeobox 6 14q23.1 CV:PGCnp
DMG:Jaffe_2016
3320 HSP90AA1 EL52 | HEL-S-65p | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP-2 | LAP2 heat shock protein 90kDa alpha family class A member 1 14q32.33 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
10116 FEM1B F1A-ALPHA | F1AA | FEM1-beta fem-1 homolog b (C. elegans) 15q22 DMG:Nishioka_2013
771 CA12 CA-XII | CAXII | HsT18816 | T18816 carbonic anhydrase XII 15q22 CV:PGCnp
DMG:Wockner_2014
54939 COMMD4 - COMM domain containing 4 15q24.2 CV:PGCnp
DMG:Wockner_2014
1133 CHRM5 HM5 cholinergic receptor muscarinic 5 15q26 ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
PMID:cooccur
4122 MAN2A2 MANA2X mannosidase alpha class 2A member 2 15q26.1 CV:PGCnp CompositeSet
Darnell FMRP targets
80213 TM2D3 BLP2 TM2 domain containing 3 15q26.3 CV:PGCnp
3835 KIF22 A-328A3.2 | KID | KNSL4 | OBP | OBP-1 | OBP-2 | SEMDJL2 kinesin family member 22 16p11.2 CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
79724 ZNF768 - zinc finger protein 768 16p11.2 CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
3687 ITGAX CD11C | SLEB6 integrin subunit alpha X 16p11.2 CV:PGCnp
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
6296 ACSM3 SA | SAH acyl-CoA synthetase medium-chain family member 3 16p13.11 CV:PGCnp
GSMA_IIE
64718 UNKL C16orf28 | ZC3H5L | ZC3HDC5L unkempt family like zinc finger 16p13.3 CV:PGCnp
DMG:Montano_2016
Ascano FMRP targets
23594 ORC6 ORC6L origin recognition complex subunit 6 16q12 CV:PGCnp
GSMA_IIE
113 ADCY7 AC7 adenylate cyclase 7 16q12.1 CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
6483 ST3GAL2 Gal-NAc6S | SIAT4B | ST3GALII | ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 16q22.1 CV:PGCnp
DMG:Wockner_2014
766 CA7 CAVII carbonic anhydrase VII 16q22.1 CV:PGCnp
DMG:Jaffe_2016
6687 SPG7 CAR | CMAR | PGN | SPG5C SPG7, paraplegin matrix AAA peptidase subunit 16q24.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
4641 MYO1C MMI-beta | MMIb | NMI | myr2 myosin IC 17p13.3 CV:PGCnp Ascano FMRP targets
8851 CDK5R1 CDK5P35 | CDK5R | NCK5A | p23 | p25 | p35 | p35nck5a cyclin-dependent kinase 5, regulatory subunit 1 (p35) 17q11.2 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3213 HOXB3 HOX2 | HOX2G | Hox-2.7 homeobox B3 17q21.3 CV:PGCnp
DMG:Wockner_2014
3219 HOXB9 HOX-2.5 | HOX2 | HOX2E homeobox B9 17q21.3 CV:PGCnp
DMG:Wockner_2014
Expression
3212 HOXB2 HOX2 | HOX2H | Hox-2.8 | K8 homeobox B2 17q21.32 CV:PGCnp
DMG:Wockner_2014
4772 NFATC1 NF-ATC | NF-ATc1.2 | NFAT2 | NFATc 核转录因子激活t细胞,细胞质,calcineurin-dependent 1 18q23 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
Network
6455 SH3GL1 CNSA1 | EEN | SH3D2B | SH3P8 SH3-domain GRB2-like 1 19p13.3 CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
23217 ZFR2 KIAA1086 zinc finger RNA binding protein 2 19p13.3 PMID:cooccur
22809 ATF5 ATFX | HMFN0395 activating transcription factor 5 19q13.3 CV:PGCnp
PMID:cooccur
6253 RTN2 NSP2 | NSPL1 | NSPLI | SPG12 reticulon 2 19q13.32 DMG:vanEijk_2014
5586 PKN2 PAK2 | PRK2 | PRKCL2 | PRO2042 | Pak-2 | STK7 protein kinase N2 1p22.2 CV:PGCnp
DMG:Nishioka_2013
51086 TNNI3K CARK | CCDD TNNI3 interacting kinase 1p31.1 CV:GWASdb
CV:PGCnp
GSMA_IIA
1491 CTH - 胱硫醚gamma-lyase 1p31.1 CV:GWAScat
CV:PGCnp
GSMA_IIA
PMID:cooccur
54741 LEPROT LEPR | OB-RGRP | OBRGRP | VPS55 leptin receptor overlapping transcript 1p31.3 CV:GWASdb
CV:PGCnp
GSMA_IIA
204 AK2 ADK2 adenylate kinase 2 1p34 CV:PGCnp
Network
5453 POU3F1 OCT6 | OTF6 | SCIP POU class 3 homeobox 1 1p34.1 CV:PGCnp
GO_Annotation
PMID:cooccur
63967 CLSPN - claspin 1p34.2 CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
27095 TRAPPC3 BET3 trafficking protein particle complex 3 1p34.3 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5511 PPP1R8 ARD-1 | ARD1 | NIPP-1 | NIPP1 | PRO2047 protein phosphatase 1 regulatory subunit 8 1p35.3 CV:PGCnp
DMG:Wockner_2014
11079 RER1 - retention in endoplasmic reticulum sorting receptor 1 1p36 CV:PGCnp
27173 SLC39A1 ZIP1 | ZIRTL solute carrier family 39 member 1 1q21 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
5298 PI4KB NPIK | PI4K-BETA | PI4K92 | PI4KBETA | PI4KIIIBETA | PIK4CB phosphatidylinositol 4-kinase beta 1q21 CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10628 TXNIP EST01027 | HHCPA78 | THIF | VDUP1 thioredoxin interacting protein 1q21.1 CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
1401 CRP PTX1 C-reactive protein, pentraxin-related 1q23.2 CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
54499 TMCO1 HP10122 | PCIA3 | PNAS-136 | TMCC4 transmembrane and coiled-coil domains 1 1 q24.1 CV:PGCnp
PMID:cooccur
140609 NEK7 - 尼玛related kinase 7 1q31.3 CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
9580 SOX13 ICA12 | Sox-13 SRY-box 13 1q32 CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
7107 GPR137B TM7SF1 G protein-coupled receptor 137B 1q42-q43 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23219 FBXO28 CENP-30 | Fbx28 F-box protein 28 1q42.11 CV:PGCnp
1114 CHGB SCG1 chromogranin B 20p12.3 Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
7150 TOP1 TOPI topoisomerase (DNA) I 20q12-q13.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
10955 SERINC3 AIGP1 | DIFF33 | SBBI99 | TDE | TDE1 | TMS-1 serine incorporator 3 20q13.12 DMG:Jaffe_2016
4685 NCAM2 NCAM21 neural cell adhesion molecule 2 21q21.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5316 PKNOX1 PREP1 | pkonx1c 交换机/knotted 1 homeobox 1 21q22.3 CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
7263 TST RDS thiosulfate sulfurtransferase 22q13.1 CV:PGCnp
PMID:cooccur
8911 CACNA1I Cav3.3 | ca(v)3.3 calcium voltage-gated channel subunit alpha1 I 22q13.1 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
2847 MCHR1 GPR24 | MCH-1R | MCH1R | SLC-1 | SLC1 melanin concentrating hormone receptor 1 22q13.2 Association
CV:PGCnp
GO_Annotation
GR_WM
PMID:cooccur
50 ACO2 ACONM | HEL-S-284 | ICRD | OCA8 | OPA9 aconitase 2 22q13.2 CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9889 ZBED4 - zinc finger BED-type containing 4 22q13.33 CV:GWASdb
CV:PGCnp
PMID:cooccur
4211 MEIS1 - Meis homeobox 1 2p14 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6432 SRSF7 9G8 | AAG3 | SFRS7 serine/arginine-rich splicing factor 7 2p22.1 CV:PGCnp
238 ALK CD246 | NBLST3 anaplastic lymphoma receptor tyrosine kinase 2p23 Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
60509 AGBL5 CCP5 ATP/GTP binding protein-like 5 2p23.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3987 LIMS1 PINCH | PINCH-1 | PINCH1 LIM zinc finger domain containing 1 2q12.3 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
5775 PTPN4 MEG | PTPMEG | PTPMEG1 protein tyrosine phosphatase, non-receptor type 4 2q14.2 CV:PGCnp
GSMA_I
GSMA_IIA
8942 KYNU KYNUU kynureninase 2q22.2 CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
10010 TANK I-TRAF | ITRAF | TRAF2 TRAF family member associated NFKB activator 2q24.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
Network
PMID:cooccur
6670 SP3 SPR2 Sp3 transcription factor 2q31 CV:PGCnp
Network
PMID:cooccur
10651 MTX2 - metaxin 2 2 q31.1 CV:PGCnp
GO_Annotation
G2Cdb.human_mitochondria
79054 TRPM8 LTRPC6 | TRPP8 transient receptor potential cation channel subfamily M member 8 2q37.1 CV:GWASdb
CV:PGCnp
23429 RYBP AAP1 | APAP-1 | DEDAF | YEAF1 RING1 and YY1 binding protein 3p13 CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
10425 ARIH2 ARI2 | TRIAD1 ariadne RBR E3 ubiquitin protein ligase 2 3p21 CV:PGCnp
Network
7474 WNT5A hWNT5A wingless-type MMTV integration site family member 5A 3p21-p14 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
51533 PHF7 HSPC045 | HSPC226 | NYD-SP6 PHD finger protein 7 3p21.1 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
LK:YES
CompositeSet
10181 RBM5 G15 | H37 | LUCA15 | RMB5 RNA binding motif protein 5 3p21.3 CV:PGCnp Ascano FMRP targets
10217 CTDSPL C3orf8 | HYA22 | PSR1 | RBSP3 | SCP3 CTD small phosphatase like 3p21.3 CV:PGCnp
GSMA_I
9807 IP6K1 IHPK1 | PiUS inositol hexakisphosphate kinase 1 3p21.31 CV:PGCnp
64925 CCDC71 - coiled-coil domain containing 71 3p21.31 CV:PGCnp
961 CD47 IAP | MER6 | OA3 CD47 molecule 3q13.1-q13.2 CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
51319 RSRC1 BM-011 | SFRS21 | SRrp53 arginine/serine-rich coiled-coil 1 3q25.32 CV:PGCnp
PMID:cooccur
29970 SCHIP1 SCHIP-1 schwannomin interacting protein 1 3q25.32-q25.33 CV:PGCnp
DMG:Wockner_2014
3840 KPNA4 IPOA3 | QIP1 | SRP3 karyopherin subunit alpha 4 3q25.33 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
131408 FAM131A C3orf40 | FLAT715 | PRO1378 family with sequence similarity 131 member A 3q27.1 DMG:Wockner_2014
3093 UBE2K E2-25K | HIP2 | HYPG | LIG | UBC1 ubiquitin conjugating enzyme E2 K 4p14 CV:PGCnp
PMID:cooccur
10891 PPARGC1A LEM6 | PGC-1(alpha) | PGC-1alpha | PGC-1v | PGC1 | PGC1A | PPARGC1 PPARG coactivator 1 alpha 4p15.1 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
23231 SEL1L3 Sel-1L3 SEL1L family member 3 4p15.2 CV:PGCnp
CV:PheWAS
6452 SH3BP2 3BP-2 | 3BP2 | CRBM | CRPM | RES4-23 SH3-domain binding protein 2 4p16.3 CV:PGCnp
DMG:Wockner_2014
23142 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 4q12 CV:PGCnp
DMG:Wockner_2014
9662 CEP135 CEP4 | KIAA0635 | MCPH8 centrosomal protein 135kDa 4q12 CV:PGCnp
DMG:Jaffe_2016
7366 UGT2B15 HLUG4 | UDPGT 2B8 | UDPGT2B15 | UDPGTH3 | UGT2B8 UDP glucuronosyltransferase family 2 member B15 4q13 DMG:Wockner_2014
1633 DCK - deoxycytidine kinase 4q13.3-q21.1 CV:PGCnp
DMG:Jaffe_2016
2798 GNRHR GNRHR1 | GRHR | HH7 | LHRHR | LRHR gonadotropin releasing hormone receptor 4q21.2 CV:PGCnp
2713 GK3P GKP3 | GKTB glycerol kinase 3 pseudogene 4q32.1 CV:PGCnp
25836 NIPBL CDLS | CDLS1 | IDN3 | IDN3-B | Scc2 Nipped-B homolog (Drosophila) 5p13.2 CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
90355 C5orf30 - chromosome 5 open reading frame 30 5q21.1 CV:GWASdb
CV:PGCnp
6414 SEPP1 SELP | SEPP | SeP selenoprotein P, plasma, 1 5q31 CV:PGCnp
GO_Annotation
PMID:cooccur
5813 PURA MRD31 | PUR-ALPHA | PUR1 | PURALPHA purine-rich element binding protein A 5q31 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
11127 KIF3A FLA10 | KLP-20 kinesin family member 3A 5q31 CV:PGCnp
GSMA_I
PMID:cooccur
4238 MFAP3 - microfibrillar associated protein 3 5q32-q33.2 CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
6586 SLIT3 MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2 slit guidance ligand 3 5q35 Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
667 DST BP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2 dystonin 6p12.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
28978 TMEM14A C6orf73 | PTD011 transmembrane protein 14A 6p12.2 CV:PGCnp
GSMA_IIE
23304 UBR2 C6orf133 | bA49A4.1 | dJ242G1.1 | dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 6p21.1 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
10475 TRIM38 RNF15 | RORET tripartite motif containing 38 6p21.3 CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
3077 HFE HFE1 | HH | HLA-H | MVCD7 | TFQTL2 hemochromatosis 6p21.3 CV:PGCnp
GSMA_I
PMID:cooccur
8357 HIST1H3H H3/k | H3F1K | H3FK histone cluster 1, H3h 6p22.1 CV:PGCnp
GSMA_I
8364 HIST1H4C H4/g | H4FG | dJ221C16.1 histone cluster 1, H4c 6p22.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
51389 RWDD1 CGI-24 | PTD013 RWD domain containing 1 6q13-q22.33 CV:GWASdb
CV:PGCnp
1268 CNR1 CANN6 | CB-R | CB1 | CB1A | CB1K5 | CB1R | CNR cannabinoid receptor 1 (brain) 6q14-q15 Association
CV:PGCnp
GR_Ng
GR_WM
Network
PMID:cooccur
CANABINOID
GPCR SIGNALLING
6885 MAP3K7 MEKK7 | TAK1 | TGF1a mitogen-activated protein kinase kinase kinase 7 6q15 CV:PGCnp
DMG:Jaffe_2016
Network
4217 MAP3K5 ASK1 | MAPKKK5 | MEKK5 mitogen-activated protein kinase kinase kinase 5 6q22.33 CV:PGCnp
DMG:Jaffe_2016
Network
Ascano FMRP targets
54806 AHI1 AHI-1 | JBTS3 | ORF1 | dJ71N10.1 Abelson helper integration site 1 6q23.3 Association
CV:GWASdb
CV:PGCnp
GR_Ng
GR_WM
PMID:cooccur
Ascano FMRP targets
348995 NUP43 bA350J20.1 | p42 nucleoporin 43kDa 6q25.1 CV:PGCnp
81552 VOPP1 ECOP | GASP vesicular, overexpressed in cancer, prosurvival protein 1 7p11.2 CV:PGCnp
DEG:Maycox_2009
64759 TNS3 TEM6 | TENS1 tensin 3 7p12.3 CV:PGCnp CompositeSet
Darnell FMRP targets
3205 HOXA9 ABD-B | HOX1 | HOX1.7 | HOX1G homeobox A9 7p15.2 DMG:Wockner_2014
3206 HOXA10 HOX1 | HOX1.8 | HOX1H | PL homeobox A10 7p15.2 DMG:Jaffe_2016
781 CACNA2D1 CACNA2 | CACNL2A | CCHL2A | LINC01112 | lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 7q21-q22 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6733 SRPK2 SFRSK2 SRSF protein kinase 2 7q22-q31.1 CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
349152 DPY19L2P2 - DPY19L2 pseudogene 2 7q22.1 CV:PGCnp
DMG:Jaffe_2016
4850 CNOT4 CLONE243 | NOT4 | NOT4H CCR4-NOT transcription complex subunit 4 7q33 CV:PGCnp
DMG:Nishioka_2013
2041 EPHA1 EPH | EPHT | EPHT1 EPH receptor A1 7q34 DMG:Wockner_2014
3638 INSIG1 CL-6 | CL6 insulin induced gene 1 7q36 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
6009 RHEB RHEB2 Ras homolog enriched in brain 7q36 CV:PGCnp
DMG:Wockner_2014
5533 PPP3CC CALNA3 | CNA3 | PP2Bgamma protein phosphatase 3 catalytic subunit gamma 8p21.3 Association
Core
CV:PGCnp
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
10395 DLC1 ARHGAP7 | HP | STARD12 | p122-RhoGAP DLC1 Rho GTPase activating protein 8p22 CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2055 CLN8 C8orf61 | EPMR ceroid-lipofuscinosis, neuronal 8 8p23 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
54512 EXOSC4 RRP41 | RRP41A | Rrp41p | SKI6 | Ski6p | hRrp41p | p12A exosome component 4 8q24.3 DMG:Wockner_2014
Expression
7415 VCP ALS14 | CMT2Y | HEL-220 | HEL-S-70 | IBMPFD | IBMPFD1 | TERA | p97 valosin containing protein 9p13.3 CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
54840 APTX AOA | AOA1 | AXA1 | EAOH | EOAHA | FHA-HIT aprataxin 9p13.3 CV:PGCnp
48 ACO1 ACONS | HEL60 | IREB1 | IREBP | IREBP1 | IRP1 aconitase 1 9p21.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
9414 TJP2 C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2 tight junction protein 2 9q13-q21 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
9568 GABBR2 GABABR2 | GPR51 | GPRC3B | HG20 | HRIHFB2099 gamma-aminobutyric acid type B receptor subunit 2 9q22.1-q22.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5090 PBX3 - pre-B-cell leukemia homeobox 3 9q33.3 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
2710 GK GK1 | GKD glycerol kinase Xp21.3 CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
CELL METABOLISM
546 ATRX ATR2 | JMS | MRX52 | MRXHF1 | RAD54 | RAD54L | SFM1 | SHS | XH2 | XNP | ZNF-HX alpha thalassemia/mental retardation syndrome X-linked Xq21.1 CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes


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