Search results: The pahtwayp1640has 316 genes in the original annotation. Currently, there are 190 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
9886 RHOBTB1 - Rho related BTB domain containing 1 10q21.2 CV:GWASdb
CV:PGCnp
3087 HHEX HEX | HMPH | HOX11L-PEN | PRH | PRHX hematopoietically expressed homeobox 10q23.33 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
159296 NKX2-3 CSX3 | NK2.3 | NKX2.3 | NKX2C | NKX4-3 NK2 homeobox 3 10q24.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6319 SCD FADS5 | MSTP008 | SCD1 | SCDOS | hSCD1 stearoyl-CoA desaturase (delta-9-desaturase) 10q24.31 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
10873 ME3 NADP-ME malic enzyme 3, NADP(+)-dependent, mitochondrial 11 cen-q22.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5954 RCN1 HEL-S-84 | PIG20 | RCAL | RCN reticulocalbin 1 11p13 CV:PGCnp
79832 QSER1 - glutamine and serine rich 1 11p13 CV:PGCnp
DNM:Guipponi_2014
114900 C1QTNF4 CTRP4 | ZACRP4 C1q and tumor necrosis factor related protein 4 11q11 CV:PGCnp
DMG:Wockner_2014
Expression
710 SERPING1 C1IN | C1INH | C1NH | HAE1 | HAE2 serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 11q12.1 CV:PGCnp
Expression
65998 C11orf95 - chromosome 11 open reading frame 95 11q13 CV:PGCnp
1374 CPT1A CPT1 | CPT1-L | L-CPT1 肉碱palmitoyltransferase 1 11q13.2 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Expression
PMID:cooccur
28970 C11orf54 PTD012 | PTOD012 chromosome 11 open reading frame 54 11q21 CV:PGCnp
DMG:Nishioka_2013
5962 RDX DFNB24 radixin 11q23 CV:PGCnp
DEG:Zhao_2015
GO_Annotation
GSMA_I
3606 IL18 IGIF | IL-18 | IL-1g | IL1F4 interleukin 18 11q23.1 Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
54477 PLEKHA5 PEPP-2 | PEPP2 pleckstrin homology domain containing A5 12p12 CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
586 BCAT1 BCATC | BCT1 | ECA39 | MECA39 | PNAS121 | PP18 branched chain amino acid transaminase 1 12p12.1 CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
2012 EMP1 CL-20 | EMP-1 | TMP epithelial membrane protein 1 12p12.3 CV:PGCnp
DMG:Wockner_2014
2120 ETV6 TEL | TEL/ABL | THC5 ETS variant 6 12p13 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
8835 SOCS2 CIS2 | Cish2 | SOCS-2 | SSI-2 | SSI2 | STATI2 suppressor of cytokine signaling 2 12q CV:PGCnp
PMID:cooccur
23468 CBX5 HEL25 | HP1 | HP1A chromobox 5 12q13.13 CV:PGCnp
DNM:Gulsuner_2013
1019 CDK4 CMM3 | PSK-J3 cyclin-dependent kinase 4 12q14 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
57460 PPM1H ARHCL1 | NERPP-2C | URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H 12q14.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8091 HMGA2 BABL | HMGI-C | HMGIC | LIPO | STQTL9 high mobility group AT-hook 2 12q15 CV:PGCnp
PMID:cooccur
7374 UNG DGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2 uracil DNA glycosylase 12q23-q24.1 CV:PGCnp
8099 CDK2AP1 DOC1 | DORC1 | ST19 | doc-1 | p12DOC-1 cyclin-dependent kinase 2 associated protein 1 12q24.31 CV:PGCnp
LK:YES
PMID:cooccur
84650 EBPL EBRP emopamil binding protein like 13q12-q13 CV:GWASdb
CV:PGCnp
79070 KDELC1 EP58 | ERp58 | KDEL1 KDEL motif containing 1 13q33 CV:PGCnp
DMG:Nishioka_2013
54841 BIVM - basic, immunoglobulin-like variable motif containing 13q33.1 CV:PGCnp
DMG:Nishioka_2013
10419 PRMT5 HRMT1L5 | IBP72 | JBP1 | SKB1 | SKB1Hs protein arginine methyltransferase 5 14q11.2 CV:PGCnp
GSMA_I
Chromatin Remodeling Genes
57820 CCNB1IP1 C14orf18 | HEI10 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 14q11.2 CV:GWASdb
CV:PGCnp
GSMA_I
5693 PSMB5 LMPX | MB1 | X proteasome subunit beta 5 14q11.2 CV:PGCnp
GSMA_I
122786 FRMD6 C14orf31 | EX1 | Willin | c14_5320 FERM domain containing 6 14q22.1 CV:PGCnp
55384 MEG3 FP504 | GTL2 | LINC00023 | NCRNA00023 | PRO0518 | PRO2160 | onco-lncRNA-83 | prebp1 maternally expressed 3 (non-protein coding) 14q32 CV:PGCnp
DMG:Wockner_2014
Expression
9834 KIAA0125 C14orf110 | FAM30A | HSPC053 KIAA0125 14q32.33 DMG:Montano_2016
4692 NDN HsT16328 | PWCR necdin, MAGE family member 15q11.2 CNV:YES
CV:PGCnp
GO_Annotation
283742 FAM98B - family with sequence similarity 98 member B 15q14 CV:PGCnp
55930 MYO5C - myosin VC 15q21 CV:PGCnp
DMG:Wockner_2014
2628 GATM AGAT | AT | CCDS3 glycine amidinotransferase 15q21.1 DMG:Wockner_2014
50810 HDGFRP3 CGI-142 | HDGF-2 | HDGF2 | HRP-3 hepatoma-derived growth factor, related protein 3 15q25.2 CV:PGCnp
DMG:Wockner_2014
6210 RPS15A S15a ribosomal protein S15a 16p CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
4363 ABCC1 ABC29 | ABCC | GS-X | MRP | MRP1 ATP binding cassette subfamily C member 1 16p13.1 CNV:YES
CV:PGCnp
GSMA_IIE
PMID:cooccur
57465 TBC1D24 DFNA65 | DFNB86 | DOORS | EIEE16 | FIME | TLDC6 TBC1 domain family member 24 16p13.3 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
84937 ZNRF1 NIN283 zinc and ring finger 1, E3 ubiquitin protein ligase 16q23.1 DMG:Wockner_2014
31 ACACA ACAC | ACACAD | ACC | ACC1 | ACCA acetyl-CoA carboxylase alpha 17q21 CNV:YES
CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
3728 JUP ARVD12 | CTNNG | DP3 | DPIII | PDGB | PKGB junction plakoglobin 17q21 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
4830 NME1 AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1 NME/NM23 nucleoside diphosphate kinase 1 17q21.3 CV:PGCnp CELL METABOLISM
CompositeSet
3213 HOXB3 HOX2 | HOX2G | Hox-2.7 homeobox B3 17q21.3 CV:PGCnp
DMG:Wockner_2014
124540 MSI2 MSI2H musashi RNA binding protein 2 17q22 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
84733 CBX2 CDCA6 | M33 | SRXY5 chromobox 2 17q25.3 CV:GWASdb
CV:PGCnp
Expression
Ascano FMRP targets
Chromatin Remodeling Genes
9331 B4GALT6 B4Gal-T6 | beta4Gal-T6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 18q11 CV:PGCnp
PMID:cooccur
25925 ZNF521 EHZF | Evi3 zinc finger protein 521 18q11.2 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Darnell FMRP targets
Ascano FMRP targets
51477 ISYNA1 INO1 | INOS | IPS | IPS 1 | IPS-1 inositol-3-phosphate synthase 1 19p13.11 CV:PGCnp
84939 MUM1 EXPAND1 | HSPC211 | MUM-1 melanoma associated antigen (mutated) 1 19p13.3 CV:PGCnp
DMG:Jaffe_2016
29128 UHRF1 ICBP90 | Np95 | RNF106 | TDRD22 | hNP95 | hUHRF1 | huNp95 ubiquitin like with PHD and ring finger domains 1 19p13.3 CV:PGCnp
DMG:Wockner_2014
55900 ZNF302 HSD16 | MST154 | MSTP154 | ZNF135L | ZNF140L | ZNF327 zinc finger protein 302 19q13.11 CV:PGCnp
DMG:Jaffe_2016
10451 VAV3 - vav guanine nucleotide exchange factor 3 1p13.3 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23576 DDAH1 DDAH | HEL-S-16 dimethylarginine dimethylaminohydrolase 1 1p22 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
NEUROTRANSMITTER METABOLISM
CompositeSet
257194 NEGR1 DMML2433 | IGLON4 | KILON | Ntra neuronal growth regulator 1 1p31.1 CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
55225 RAVER2 - ribonucleoprotein, PTB-binding 2 1p31.3 CV:GWASdb
CV:PGCnp
GSMA_IIA
85440 DOCK7 EIEE23 | ZIR2 dedicator of cytokinesis 7 1p31.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
4352 MPL C-MPL | CD110 | MPLV | THCYT2 | TPOR MPL proto-oncogene, thrombopoietin receptor 1p34 CV:PGCnp
Expression
PMID:cooccur
3925 STMN1 C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMN stathmin 1 1p36.11 CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
1953 MEGF6 EGFL3 multiple EGF like domains 6 1p36.3 CV:PGCnp
DMG:Wockner_2014
63976 PRDM16 CMD1LL | LVNC8 | MEL1 | PFM13 PR domain 16 1p36.32 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
9900 SV2A SV2 synaptic vesicle glycoprotein 2A 1q21.2 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
EXOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
23126 POGZ MRD37 | WHSUS | ZNF280E | ZNF635 | ZNF635m pogo transposable element with ZNF domain 1q21.3 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
CompositeSet
5321 PLA2G4A PLA2G4 | cPLA2 | cPLA2-alpha phospholipase A2 group IVA 1第三季1.1 Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
947 CD34 - CD34 molecule 1第三季2 CV:GWASdb
CV:PGCnp
PMID:cooccur
10765 KDM5B CT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1 lysine demethylase 5B 1第三季2.1 CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
64754 SMYD3 KMT3E | ZMYND1 | ZNFN3A1 | bA74P14.1 SET and MYND domain containing 3 1q44 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
10000 AKT3 MPPH | MPPH2 | PKB-GAMMA | PKBG | PRKBG | RAC-PK-gamma | RAC-gamma | STK-2 v-akt murine thymoma viral oncogene homolog 3 1q44 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
23236 PLCB1 EIEE12 | PI-PLC | PLC-154 | PLC-I | PLC-beta-1 | PLC154 | PLCB1A | PLCB1B phospholipase C beta 1 20p12 CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5332 PLCB4 ARCND2 | PI-PLC phospholipase C beta 4 20p12 CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
1789 DNMT3B ICF | ICF1 | M.HsaIIIB DNA (cytosine-5-)-methyltransferase 3 beta 20q11.2 CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
10079 ATP9A ATPIIA 腺苷三磷酸酶磷脂运输9(假定的) 20q13.2 CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
8204 NRIP1 RIP140 nuclear receptor interacting protein 1 21q11.2 CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
Darnell FMRP targets
2078 ERG erg-3 | p55 v-ets avian erythroblastosis virus E26 oncogene homolog 21q22.3 CV:GWASdb
CV:PGCnp
PMID:cooccur
8624 PSMG1 C21LRP | DSCR2 | LRPC21 | PAC-1 | PAC1 proteasome (prosome, macropain) assembly chaperone 1 21q22.3 CV:PGCnp
3543 IGLL1 14.1 | AGM2 | CD179b | IGL1 | IGL5 | IGLJ14.1 | IGLL | IGO | IGVPB | VPREB2 immunoglobulin lambda like polypeptide 1 22q11.23 CV:GWASdb
CV:PGCnp
CV:PheWAS
GSMA_I
55000 TUG1 LINC00080 | NCRNA00080 | TI-227H taurine up-regulated 1 (non-protein coding) 22q12.2 CV:PGCnp
85358 SHANK3 DEL22q13.3 | PROSAP2 | PSAP2 | SCZD15 | SPANK-2 SH3 and multiple ankyrin repeat domains 3 22q13.3 CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
4211 MEIS1 - Meis homeobox 1 2p14 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
53335 BCL11A BCL11A-L | BCL11A-S | BCL11A-XL | BCL11a-M | CTIP1 | EVI9 | HBFQTL5 | ZNF856 B-cell CLL/lymphoma 11A 2p16.1 CV:GWASdb
CV:PGCnp
PMID:cooccur
55120 FANCL FAAP43 | PHF9 | POG Fanconi anemia complementation group L 2p16.1 CV:PGCnp
51232 CRIM1 CRIM-1 | S52 cysteine rich transmembrane BMP regulator 1 (chordin-like) 2p21 CV:PGCnp
GO_Annotation
7837 PXDN COPOA | D2S448 | D2S448E | MG50 | PRG2 | PXN | VPO peroxidasin 2p25 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
23175 LPIN1 PAP1 lipin 1 2p25.1 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9392 TGFBRAP1 TRAP-1 | TRAP1 | VPS3 transforming growth factor beta receptor associated protein 1 2q12.1 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
6328 SCN3A NAC3 | Nav1.3 sodium voltage-gated channel alpha subunit 3 2q24 CV:PGCnp
GSMA_IIA
EXCITABILITY
6335 SCN9A ETHA | FEB3B | GEFSP7 | HSAN2D | NE-NA | NENA | Nav1.7 | PN1 | SFNP sodium voltage-gated channel alpha subunit 9 2q24 CV:PGCnp
GSMA_IIA
EXCITABILITY
85461 TANC1 ROLSB | TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 2q24.2 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
CompositeSet
Potential synaptic genes
83879 CDCA7 JPO1 cell division cycle associated 7 2q31 CV:PGCnp
DNM:Fromer_2014
CompositeSet
5136 PDE1A CAM-PDE-1A | HCAM-1 | HCAM1 | HSPDE1A phosphodiesterase 1A 2q32.1 CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
165215 FAM171B KIAA1946 family with sequence similarity 171 member B 2q32.1 CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
3329 HSPD1 CPN60 | GROEL | HLD4 | HSP-60 | HSP60 | HSP65 | HuCHA60 | SPG13 heat shock protein family D (Hsp60) member 1 2q33.1 CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
151473 SLC16A14 MCT14 solute carrier family 16 member 14 2q36.3 CV:PGCnp
DMG:Wockner_2014
81618 ITM2C BRI3 | BRICD2C | E25 | E25C | ITM3 integral membrane protein 2C 2q37 CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
23677 SH3BP4 BOG25 | TTP SH3-domain binding protein 4 2q37.1-q37.2 CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23150 FRMD4B 6030440G05Rik | GRSP1 FERM domain containing 4B 3p14.1 CV:PGCnp
Expression
64943 NT5DC2 - 5'-nucleotidase domain containing 2 3p21.1 CV:PGCnp
LK:YES
3680 ITGA9 ALPHA-RLC | ITGA4L | RLC integrin subunit alpha 9 3p21.3 CV:PGCnp
GSMA_I
152273 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 3p25.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
2624 GATA2 DCML | IMD21 | MONOMAC | NFE1B GATA binding protein 2 3q21.3 CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
PMID:cooccur
27032 ATP2C1 ATP2C1A | BCPM | HHD | PMR1 | SPCA1 | hSPCA1 ATPase secretory pathway Ca2+ transporting 1 3q22.1 CV:PGCnp
DMG:vanEijk_2014
1359 CPA3 MC-CPA carboxypeptidase A3 3q24 CV:PGCnp
29970 SCHIP1 SCHIP-1 schwannomin interacting protein 1 3q25.32-q25.33 CV:PGCnp
DMG:Wockner_2014
151790 WDR49 - WD repeat domain 49 3q26.1 CV:PGCnp
DMG:Wockner_2014
27333 GOLIM4 GIMPC | GOLPH4 | GPP130 | P138 golgi integral membrane protein 4 3q26.2 CV:PGCnp
DMG:Jaffe_2016
389206 BEND4 CCDC4 BEN domain containing 4 4p13 CV:PGCnp
22998 LIMCH1 LIMCH1A | LMO7B LIM and calponin homology domains 1 4p13 CV:GWASdb
CV:PGCnp
3490 IGFBP7 AGM | FSTL2 | IBP-7 | IGFBP-7 | IGFBP-7v | IGFBPRP1 | MAC25 | PSF | RAMSVPS | TAF insulin like growth factor binding protein 7 4q12 CV:PGCnp
DMG:Wockner_2014
3815 KIT C-Kit | CD117 | PBT | SCFR KIT proto-oncogene receptor tyrosine kinase 4q12 CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
10606 PAICS ADE2 | ADE2H1 | AIRC | PAIS phosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 4q12 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5311 PKD2 APKD2 | PC2 | PKD4 | Pc-2 | TRPP2 polycystin 2, transient receptor potential cation channel 4q22.1 CV:PGCnp
CV:PheWAS
27306 HPGDS GSTS | GSTS1 | GSTS1-1 | PGD2 | PGDS hematopoietic prostaglandin D synthase 4q22.3 CV:GWASdb
CV:PGCnp
64116 SLC39A8 BIGM103 | CDG2N | LZT-Hs6 | PP3105 | ZIP8 solute carrier family 39 member 8 4q24 CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
81579 PLA2G12A GXII | PLA2G12 | ROSSY phospholipase A2 group XIIA 4q25 CV:PGCnp
DMG:Wockner_2014
4086 SMAD1 BSP-1 | BSP1 | JV4-1 | JV41 | MADH1 | MADR1 SMAD family member 1 4q31 CV:PGCnp
GO_Annotation
51809 GALNT7 GALNAC-T7 | GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 4q31.1 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
56034 PDGFC FALLOTEIN | SCDGF platelet derived growth factor C 4q32 CV:PGCnp
DMG:Jaffe_2016
79884 MAP9 ASAP microtubule associated protein 9 4q32.1 CV:PGCnp
2982 GUCY1A3 GC-SA3 | GUC1A3 | GUCA3 | GUCSA3 | GUCY1A1 | MYMY6 guanylate cyclase 1, soluble, alpha 3 4q32.1 CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
50859 SPOCK3 HSAJ1454 | TES-3 | TICN3 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 4q32.3 CV:PGCnp
57630 SH3RF1 POSH | RNF142 | SH3MD2 SH3 domain containing ring finger 1 4q32.3 CV:GWASdb
CV:PGCnp
GO_Annotation
116966 WDR17 - WD repeat domain 17 4q34 CV:PGCnp
10605 PAIP1 - poly(A) binding protein interacting protein 1 5p12 CV:PGCnp
23037 PDZD2 AIPC | PAPIN | PDZK3 | PIN1 PDZ domain containing 2 5p13.3 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
4883 NPR3 ANP-C | ANPR-C | ANPRC | C5orf23 | GUCY2B | NPR-C | NPRC natriuretic peptide receptor 3 5p13.3 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
375449 MAST4 - microtubule associated serine/threonine kinase family member 4 5q12.3 CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
84327 ZBED3 - zinc finger BED-type containing 3 5q13.3 CV:PGCnp
DMG:Jaffe_2016
1393 CRHBP CRF-BP | CRFBP corticotropin releasing hormone binding protein 5q13.3 CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
3156 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase 5q13.3-q14 CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
5066 PAM PAL | PHM peptidylglycine alpha-amidating monooxygenase 5q14-q21 CV:GWASdb
CV:PGCnp
Expression
GR_Ng
PMID:cooccur
153364 MBLAC2 - metallo-beta-lactamase domain containing 2 5q14.3 CV:PGCnp
6414 SEPP1 SELP | SEPP | SeP selenoprotein P, plasma, 1 5q31 CV:PGCnp
GO_Annotation
PMID:cooccur
9555 H2AFY H2A.y | H2A/y | H2AF12M | MACROH2A1.1 | mH2A1 | macroH2A1.2 H2A histone family member Y 5q31.1 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
51237 MZB1 MEDA-7 | PACAP | pERp1 marginal zone B and B1 cell specific protein 5q31.2 GSMA_I
PMID:cooccur
1809 DPYSL3 CRMP-4 | CRMP4 | DRP-3 | DRP3 | LCRMP | ULIP | ULIP-1 dihydropyrimidinase like 3 5q32 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
92181 UBTD2 DCUBP ubiquitin domain containing 2 5q35.1 CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
667 DST BP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2 dystonin 6p12.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9481 SLC25A27 UCP4 solute carrier family 25 member 27 6p12.3 Association
CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
860 RUNX2 AML3 | CBF-alpha-1 | CBFA1 | CCD | CCD1 | CLCD | OSF-2 | OSF2 | PEA2aA | PEBP2aA runt related transcription factor 2 6p21 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
27242 TNFRSF21 BM-018 | CD358 | DR6 tumor necrosis factor receptor superfamily member 21 6p21.1 CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
7718 ZNF165 CT53 | LD65 | ZSCAN7 zinc finger protein 165 6p21.3 CV:PGCnp
GSMA_I
8418 CMAHP CMAH | CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene 6 p21.32 CV:PGCnp
84547 PGBD1 HUCEP-4 | SCAND4 | dJ874C20.4 piggyBac transposable element derived 1 6p22.1 CV:GWASdb
CV:PGCnp
Expression
GSMA_I
PMID:cooccur
221692 PHACTR1 RPEL | RPEL1 | dJ257A7.2 phosphatase and actin regulator 1 6p24.1 CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
135293 PM20D2 ACY1L2 | bA63L7.3 peptidase M20 domain containing 2 6q15 DMG:Jaffe_2016
22881 ANKRD6 - ankyrin repeat domain 6 6q15 CV:PGCnp
DMG:Wockner_2014
154215 NKAIN2 FAM77B | NKAIP2 | TCBA | TCBA1 Na+/K+ transporting ATPase interacting 2 6q21 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
8936 WASF1 SCAR1 | WAVE | WAVE1 WAS protein family member 1 6q21 CV:PGCnp
DEG:Maycox_2009
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
4602 MYB Cmyb | c-myb | c-myb_CDS | efg MYB proto-oncogene, transcription factor 6q22-q23 CV:PGCnp
PMID:cooccur
114801 TMEM200A KIAA1913 | TTMA | TTMC transmembrane protein 200A 6q23.1 CV:PGCnp
9053 MAP7 E-MAP-115 | EMAP115 microtubule associated protein 7 6q23.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5325 PLAGL1 LOT1 | ZAC | ZAC1 PLAG1 like zinc finger 1 6q24-q25 CV:PGCnp
DMG:Wockner_2014
154043 CNKSR3 MAGI1 CNKSR family member 3 6q25.2 CV:PGCnp
DMG:Nishioka_2013
64759 TNS3 TEM6 | TENS1 tensin 3 7p12.3 CV:PGCnp CompositeSet
Darnell FMRP targets
9805 SCRN1 SES1 secernin 1 7p14.3 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
3205 HOXA9 ABD-B | HOX1 | HOX1.7 | HOX1G homeobox A9 7p15.2 DMG:Wockner_2014
3206 HOXA10 HOX1 | HOX1.8 | HOX1H | PL homeobox A10 7p15.2 DMG:Jaffe_2016
221806 VWDE - von Willebrand factor D and EGF domains 7p21.3 CV:GWASdb
CV:PGCnp
83698 CALN1 CABP8 calneuron 1 7q11 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
51351 ZNF117 H-plk | HPF9 zinc finger protein 117 7q11.21 CV:PGCnp
DMG:Wockner_2014
3315 HSPB1 CMT2F | HEL-S-102 | HMN2B | HS.76067 | HSP27 | HSP28 | Hsp25 | SRP27 heat shock protein family B (small) member 1 7q11.23 CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2770 GNAI1 Gi G蛋白质subunit alpha i1 7q21 CV:PGCnp
Network
PMID:cooccur
CANABINOID
G-PROTEIN RELAY
SEROTONIN
Potential synaptic genes
1021 CDK6 MCPH12 | PLSTIRE cyclin-dependent kinase 6 7q21-q22 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
5445 PON2 - paraoxonase 2 7q21.3 CV:GWASdb
CV:PGCnp
7205 TRIP6 OIP-1 | OIP1 | TRIP-6 | TRIP6i2 | ZRP-1 thyroid hormone receptor interactor 6 7q22 CV:PGCnp
Network
22797 TFEC TCFEC | TFE-C | TFEC-L | TFECL | bHLHe34 | hTFEC-L transcription factor EC 7q31.2 CV:PGCnp
4232 MEST PEG1 mesoderm specific transcript 7q32 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Ambalavanan_2016
PMID:cooccur
11030 RBPMS HERMES RNA binding protein with multiple splicing 8p12 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
Network
80243 PREX2 6230420N16Rik | DEP.2 | DEPDC2 | P-REX2 | PPP1R129 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 8q13.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
2171 FABP5 E-FABP | EFABP | KFABP | PA-FABP | PAFABP fatty acid binding protein 5 8q21.13 CV:GWASdb
CV:PGCnp
Expression
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
51366 UBR5 DD5 | EDD | EDD1 | HYD ubiquitin protein ligase E3 component n-recognin 5 8q22 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
286148 DPY19L4 - dpy-19 like 4 (C. elegans) 8q22.1 CV:PGCnp
DMG:Jaffe_2016
79870 BAALC - brain and acute leukemia, cytoplasmic 8q22.3 CV:PGCnp
DMG:Wockner_2014
115908 CTHRC1 - collagen triple helix repeat containing 1 8q22.3 CV:PGCnp
284 ANGPT1 AGP1 | AGPT | ANG1 angiopoietin 1 8q23.1 CV:GWASdb
CV:PGCnp
GO_Annotation
64798 DEPTOR DEP.6 | DEPDC6 DEP domain containing MTOR-interacting protein 8q24.12 CV:PGCnp
DMG:Jaffe_2016
10656 KHDRBS3 Etle | SALP | SLM-2 | SLM2 | T-STAR | TSTAR | etoile KH domain containing, RNA binding, signal transduction associated 3 8q24.2 CV:PGCnp
DMG:Wockner_2014
286319 TUSC1 TSG-9 | TSG9 tumor suppressor candidate 1 9p21.2 CV:GWASdb
CV:PGCnp
4300 MLLT3 AF9 | YEATS3 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 9p22 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
6595 SMARCA2 BAF190 | BRM | NCBRS | SNF2 | SNF2L2 | SNF2LA | SWI2 | Sth1p | hBRM | hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9p22.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
79956 ERMP1 FXNA | KIAA1815 | bA207C16.3 endoplasmic reticulum metallopeptidase 1 9p24 CV:PGCnp
DMG:Jaffe_2016
216 ALDH1A1 ALDC | ALDH-E1 | ALDH1 | ALDH11 | HEL-9 | HEL-S-53e | HEL12 | PUMB1 | RALDH1 aldehyde dehydrogenase 1 family member A1 9q21.13 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1612 DAPK1 DAPK death-associated protein kinase 1 9q21.33 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DNM:McCarthy_2014
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
138311 FAM69B C9orf136 | pp6977 family with sequence similarity 69 member B 9q34.3 CV:PGCnp
DMG:Wockner_2014
8241 RBM10 DXS8237E | GPATC9 | GPATCH9 | S1-1 | TARPS | ZRANB5 RNA binding motif protein 10 Xp11.23 CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5358 PLS3 BMND18 | T-plastin plastin 3 Xq23 CV:PGCnp
DMG:Nishioka_2013
6594 SMARCA1 ISWI | NURF140 | SNF2L | SNF2L1 | SNF2LB | SNF2LT | SWI | SWI2 | hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 Xq25 CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes


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