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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group? | Functional group? |
|---|---|---|---|---|---|---|
| 55388 | MCM10 | CNA43 | DNA43 | PRO2249 | minichromosome maintenance 10 replication initiation factor | 10p13 | CV:PGCnp DMG:Wockner_2014 |
Ascano FMRP targets |
| 11130 | ZWINT | HZwint-1 | KNTC2AP | SIP30 | ZWINT1 | ZW10 interacting kinetochore protein | 10q21-q22 | CV:PGCnp DMG:Jaffe_2016 |
G2Cdb.humanPSD G2Cdb.humanPSP |
| 983 | CDK1 | CDC2 | CDC28A | P34CDC2 | cyclin-dependent kinase 1 | 10q21.1 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 GO_Annotation Network |
|
| 9562 | MINPP1 | HIPER1 | MINPP2 | MIPP | multiple inositol-polyphosphate phosphatase 1 | 10q23 | CV:GWASdb CV:PGCnp |
|
| 3832 | KIF11 | EG5 | HKSP | KNSL1 | MCLMR | TRIP5 | kinesin family member 11 | 10q24.1 | CV:PGCnp CV:PheWAS |
|
| 84986 | ARHGAP19 | - | Rho GTPase activating protein 19 | 10q24.1 | CV:PGCnp DEG:Zhao_2015 |
|
| 10360 | NPM3 | PORMIN | TMEM123 | nucleophosmin/nucleoplasmin 3 | 10q24.31 | CV:PGCnp | |
| 6240 | RRM1 | R1 | RIR1 | RR1 | ribonucleotide reductase catalytic subunit M1 | 11p15.5 | CV:PGCnp PMID:cooccur |
G2Cdb.humanPSD G2Cdb.humanPSP |
| 2237 | FEN1 | FEN-1 | MF1 | RAD2 | flap structure-specific endonuclease 1 | 11q12 | DMG:Nishioka_2013 DMG:Wockner_2014 PMID:cooccur |
|
| 5553 | PRG2 | BMPG | MBP | MBP1 | proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) | 11q12 | CV:PGCnp DMG:Wockner_2014 |
|
| 3014 | H2AFX | H2A.X | H2A/X | H2AX | H2A histone family member X | 11q23.3 | CV:PGCnp DMG:Wockner_2014 GSMA_I |
|
| 1111 | CHEK1 | CHK1 | checkpoint kinase 1 | 11q24.2 | CV:GWASdb CV:PGCnp Network PMID:cooccur |
|
| 9700 | ESPL1 | ESP1 | SEPA | extra spindle pole bodies like 1, separase | 12q | CV:PGCnp GO_Annotation |
Ascano FMRP targets |
| 6472 | SHMT2 | GLYA | HEL-S-51e | SHMT | serine hydroxymethyltransferase 2 | 12q12-q14 | CV:GWAScat CV:PGC128 CV:PGCnp |
|
| 29127 | RACGAP1 | CYK4 | HsCYK-4 | ID-GAP | MgcRacGAP | Rac GTPase activating protein 1 | 12q13.12 | CV:GWASdb CV:PGCnp GO_Annotation |
|
| 5983 | RFC3 | RFC38 | replication factor C subunit 3 | 13q13.2 | CV:PGCnp DMG:Jaffe_2016 |
|
| 8803 | SUCLA2 | A-BETA | MTDPS5 | SCS-betaA | succinate-CoA ligase, ADP-forming, beta subunit | 13q14.2 | CV:PGCnp DMG:Jaffe_2016 |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_mitochondria G2Cdb.human_TAP-PSD-95-CORE G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet |
| 10257 | ABCC4 | MOAT-B | MOATB | MRP4 | ATP binding cassette subfamily C member 4 | 13q32 | CV:GWASdb CV:PGCnp |
|
| 5427 | POLE2 | DPE2 | polymerase (DNA) epsilon 2, accessory subunit | 14q21-q22 | CV:PGCnp | |
| 1033 | CDKN3 | CDI1 | CIP2 | KAP | KAP1 | cyclin-dependent kinase inhibitor 3 | 14q22 | CV:GWAScat CV:GWASdb CV:PGCnp DNM:Kranz_2015 PMID:cooccur |
|
| 87 | ACTN1 | BDPLT15 | actinin alpha 1 | 14q24|14q22-q24 | CV:PGCnp CV:PheWAS DMG:Nishioka_2013 DNM:Fromer_2014 |
STRUCTURAL PLASTICITY G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet Ascano FMRP targets |
| 7443 | VRK1 | PCH1 | PCH1A | vaccinia related kinase 1 | 14q32 | CV:PGCnp | Ascano FMRP targets |
| 701 | BUB1B | BUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1 | BUB1有丝分裂检查点丝氨酸/苏氨酸激酶B | 15q15 | CV:PGCnp DMG:Jaffe_2016 |
|
| 11339 | OIP5 | 5730547N13Rik | CT86 | LINT-25 | MIS18B | MIS18beta | hMIS18beta | Opa interacting protein 5 | 15q15.1 | CV:PGCnp DNM:Fromer_2014 |
|
| 6652 | SORD | HEL-S-95n | SORD1 | sorbitol dehydrogenase | 15q15.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 1854 | DUT | dUTPase | deoxyuridine triphosphatase | 15q21.1 | CV:GWASdb DMG:vanEijk_2014 PMID:cooccur |
|
| 3067 | HDC | - | histidine decarboxylase | 15q21.2 | CV:PGCnp PMID:cooccur |
|
| 9133 | CCNB2 | HsT17299 | cyclin B2 | 15q22.2 | CV:GWASdb CV:PGCnp |
|
| 9768 | KIAA0101 | L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAF | KIAA0101 | 15q22.31 | CV:PGCnp | |
| 55215 | FANCI | KIAA1794 | Fanconi anemia complementation group I | 15q26.1 | CV:PGCnp | Ascano FMRP targets |
| 9055 | PRC1 | ASE1 | protein regulator of cytokinesis 1 | 15q26.1 | CV:PGCnp | |
| 3418 | IDH2 | D2HGA2 | ICD-M | IDH | IDHM | IDP | IDPM | mNADP-IDH | isocitrate dehydrogenase 2 (NADP+), mitochondrial | 15q26.1 | CV:PGCnp DMG:Jaffe_2016 |
G2Cdb.human_mitochondria G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet Chromatin Remodeling Genes |
| 51659 | GINS2 | HSPC037 | PSF2 | Pfs2 | GINS complex subunit 2 (Psf2 homolog) | 16q24.1 | CV:PGCnp | |
| 8140 | SLC7A5 | 4F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1 | solute carrier family 7 member 5 | 16q24.3 | CV:PGCnp DMG:Montano_2016 DMG:Wockner_2014 GO_Annotation |
CELL METABOLISM |
| 5376 | PMP22 | CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110 | peripheral myelin protein 22 | 17p12 | CV:PGCnp DEG:Zhao_2015 GO_Annotation PMID:cooccur |
|
| 6347 | CCL2 | GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CF | C-C motif chemokine ligand 2 | 17q11.2-q12 | CV:PGCnp Expression PMID:cooccur |
|
| 672 | BRCA1 | BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53 | breast cancer 1 | 17q21 | CV:PGCnp DMG:Wockner_2014 Network PMID:cooccur |
|
| 7153 | TOP2A | TOP2 | TP2A | topoisomerase (DNA) II alpha | 17q21.2 | CV:PGCnp Network PMID:cooccur |
Ascano FMRP targets |
| 4353 | MPO | - | myeloperoxidase | 17q23.1 | CV:PGCnp PMID:cooccur |
|
| 3838 | KPNA2 | IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alpha | karyopherin subunit alpha 2 | 17q24.2 | CV:PGCnp DMG:Nishioka_2013 Network |
|
| 79902 | NUP85 | FROUNT | Nup75 | nucleoporin 85kDa | 17q25.1 | CV:PGCnp DMG:Jaffe_2016 |
|
| 79959 | CEP76 | C18orf9 | HsT1705 | centrosomal protein 76kDa | 18p11.21 | CV:PGCnp | |
| 84617 | TUBB6 | HsT1601 | TUBB-5 | tubulin beta 6 class V | 18p11.21 | CV:PGCnp DMG:Wockner_2014 |
G2Cdb.human_TAP-PSD-95-CORE |
| 63895 | PIEZO2 | C18orf30 | C18orf58 | DA3 | DA5 | FAM38B | FAM38B2 | HsT748 | HsT771 | MWKS | piezo type mechanosensitive ion channel component 2 | 18p11.22 | CV:GWASdb CV:PGCnp DNM:McCarthy_2014 |
|
| 11031 | RAB31 | Rab22B | RAB31, member RAS oncogene family | 18p11.3 | CV:PGCnp DMG:vanEijk_2014 DMG:Wockner_2014 Expression |
INTRACELLULAR TRAFFICKING |
| 5055 | SERPINB2 | HsT1201 | PAI | PAI-2 | PAI2 | PLANH2 | serpin peptidase inhibitor, clade B (ovalbumin), member 2 | 18q21.3 | DMG:Wockner_2014 GO_Annotation |
|
| 7001 | PRDX2 | HEL-S-2a | NKEF-B | NKEFB | PRP | PRX2 | PRXII | PTX1 | TDPX1 | TPX1 | TSA | peroxiredoxin 2 | 19p13.2 | CV:PGCnp DMG:Jaffe_2016 |
CELL METABOLISM G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.human_clathrin G2Cdb.human_Synaptosome G2Cdb.human_TAP-PSD-95-CORE G2Cdb.humanNRC G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet |
| 898 | CCNE1 | CCNE | pCCNE1 | cyclin E1 | 19q12 | CV:PGCnp DMG:Montano_2016 Network |
|
| 1178 | CLC | GAL10 | Gal-10 | LGALS10 | LGALS10A | LPPL_HUMAN | Charcot-Leyden crystal galectin | 19q13.1 | CV:GWAScat CV:GWASdb CV:PGCnp PMID:cooccur |
|
| 5825 | ABCD3 | ABC43 | CBAS5 | PMP70 | PXMP1 | ZWS2 | ATP binding cassette subfamily D member 3 | 1p21.3 | CV:PGCnp DMG:Jaffe_2016 |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet |
| 3953 | LEPR | CD295 | LEP-R | LEPRD | OB-R | OBR | leptin receptor | 1p31 | CV:PGCnp GSMA_IIA PMID:cooccur |
|
| 991 | CDC20 | CDC20A | bA276H19.3 | p55CDC | cell division cycle 20 | 1p34.1 | CV:PGCnp Network PMID:cooccur |
|
| 11004 | KIF2C | CT139 | KNSL6 | MCAK | kinesin family member 2C | 1p34.1 | CV:PGCnp PMID:cooccur |
Ascano FMRP targets |
| 11332 | ACOT7 | ACH1 | ACT | BACH | CTE-II | LACH | LACH1 | hBACH | acyl-CoA thioesterase 7 | 1p36 | CV:PGCnp DMG:Jaffe_2016 |
|
| 3925 | STMN1 | C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMN | stathmin 1 | 1p36.11 | CV:PGCnp GO_Annotation PMID:cooccur |
STRUCTURAL PLASTICITY |
| 1163 | CKS1B | CKS1 | PNAS-16 | PNAS-18 | ckshs1 | CDC28 protein kinase regulatory subunit 1B | 1q21.2 | CV:PGCnp DMG:Nishioka_2013 GSMA_I GSMA_IIA |
|
| 4000 | LMNA | CDCD1 | CDDC | CMD1A | CMT2B1 | EMD2 | FPL | FPLD | FPLD2 | HGPS | IDC | LDP1 | LFP | LGMD1B | LMN1 | LMNC | LMNL1 | PRO1 | lamin A/C | 1q22 | CV:PGCnp Expression GSMA_I GSMA_IIA Network PMID:cooccur |
|
| 259266 | ASPM | ASP | Calmbp1 | MCPH5 | abnormal spindle microtubule assembly | 1q31 | CV:PGCnp GO_Annotation PMID:cooccur |
|
| 1434 | CSE1L | CAS | CSE1 | XPO2 | CSE1 chromosome segregation 1-like (yeast) | 20q13 | CV:PGCnp DMG:vanEijk_2014 Network |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.humanNRC CompositeSet |
| 11065 | UBE2C | UBCH10 | dJ447F3.2 | ubiquitin conjugating enzyme E2 C | 20q13.12 | CV:PGCnp DMG:Wockner_2014 |
|
| 5902 | RANBP1 | HTF9A | RAN binding protein 1 | 22q11.21 | Association CNV:YES CV:PGCnp DMG:Jaffe_2016 GR_WM GSMA_I Network PMID:cooccur |
|
| 8318 | CDC45 | CDC45L | CDC45L2 | PORC-PI-1 | cell division cycle 45 | 22q11.21 | CNV:YES CV:PGCnp GSMA_I |
|
| 7263 | TST | RDS | thiosulfate sulfurtransferase | 22q13.1 | CV:PGCnp PMID:cooccur |
|
| 9582 | APOBEC3B | A3B | APOBEC1L | ARCD3 | ARP4 | DJ742C19.2 | PHRBNL | bK150C2.2 | apolipoprotein B mRNA editing enzyme catalytic subunit 3B | 22q13.1-q13.2 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
|
| 79019 | CENPM | C22orf18 | CENP-M | PANE1 | centromere protein M | 22q13.2 | CV:PGC128 CV:PGCnp |
|
| 25813 | SAMM50 | CGI-51 | OMP85 | SAM50 | TOB55 | TRG-3 | YNL026W | SAMM50 sorting and assembly machinery component | 22q13.31 | CV:PGCnp DMG:Nishioka_2013 DMG:Wockner_2014 Expression |
RNA AND PROTEIN SYNTHESIS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS |
| 1058 | CENPA | CENP-A | CenH3 | centromere protein A | 2p23.3 | CV:PGCnp | |
| 699 | BUB1 | BUB1A | BUB1L | hBUB1 | BUB1 mitotic checkpoint serine/threonine kinase | 2q14 | CV:PGCnp DMG:Jaffe_2016 GSMA_I GSMA_IIA |
|
| 27347 | STK39 | DCHT | PASK | SPAK | serine/threonine kinase 39 | 2q24.3 | CV:PGCnp GSMA_IIA PMID:cooccur |
G2Cdb.humanNRC G2Cdb.humanPSD G2Cdb.humanPSP |
| 57405 | SPC25 | AD024 | SPBC25 | hSpc25 | SPC25, NDC80 kinetochore complex component | 2q31.1 | CV:GWASdb CV:PGCnp GSMA_IIA |
|
| 8520 | HAT1 | KAT1 | histone acetyltransferase 1 | 2q31.2-q33.1 | CV:PGCnp DMG:Jaffe_2016 |
Chromatin Remodeling Genes |
| 64943 | NT5DC2 | - | 5'-nucleotidase domain containing 2 | 3p21.1 | CV:PGCnp LK:YES |
|
| 5627 | PROS1 | PROS | PS21 | PS22 | PS23 | PS24 | PS25 | PSA | THPH5 | THPH6 | protein S (alpha) | 3q11.2 | CV:PGCnp DMG:Nishioka_2013 GSMA_IIA GSMA_IIE |
|
| 1475 | CSTA | AREI | PSS4 | STF1 | STFA | cystatin A | 3q21 | CV:PGCnp DMG:vanEijk_2014 |
|
| 1359 | CPA3 | MC-CPA | carboxypeptidase A3 | 3q24 | CV:PGCnp | |
| 1894 | ECT2 | ARHGEF31 | epithelial cell transforming 2 | 3q26.1-q26.2 | CV:PGCnp | |
| 64151 | NCAPG | CAPG | CHCG | NY-MEL-3 | YCG1 | non-SMC condensin I complex subunit G | 4p15.33 | CV:PGCnp | Ascano FMRP targets |
| 27306 | HPGDS | GSTS | GSTS1 | GSTS1-1 | PGD2 | PGDS | hematopoietic prostaglandin D synthase | 4q22.3 | CV:GWASdb CV:PGCnp |
|
| 79071 | ELOVL6 | FACE | FAE | LCE | ELOVL fatty acid elongase 6 | 4q25 | CV:GWASdb CV:PGCnp DEG:Sanders_2013 DMG:Jaffe_2016 DMG:Wockner_2014 |
|
| 4085 | MAD2L1 | HSMAD2 | MAD2 | MAD2 mitotic arrest deficient-like 1 (yeast) | 4q27 | CV:PGCnp DMG:Jaffe_2016 |
|
| 3161 | HMMR | CD168 | IHABP | RHAMM | hyaluronan mediated motility receptor | 5q34 | CV:PGCnp DMG:vanEijk_2014 GSMA_IIA GSMA_IIE |
|
| 94081 | SFXN1 | - | sideroflexin 1 | 5q35.3 | CV:GWASdb CV:PGCnp GSMA_IIA |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_clathrin G2Cdb.human_mitochondria G2Cdb.human_Synaptosome CompositeSet |
| 3006 | HIST1H1C | H1.2 | H1C | H1F2 | H1s-1 | histone cluster 1, H1c | 6p21.3 | CV:PGCnp DMG:Jaffe_2016 GSMA_I |
|
| 10492 | SYNCRIP | GRY-RBP | GRYRBP | HNRNPQ | HNRPQ1 | NSAP1 | PP68 | hnRNP-Q | synaptotagmin binding, cytoplasmic RNA interacting protein | 6q14-q15 | CV:PGCnp | |
| 7272 | TTK | CT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYT | TTK protein kinase | 6q14.1 | CV:PGCnp DNM:Fromer_2014 |
CompositeSet |
| 26271 | FBXO5 | EMI1 | FBX5 | Fbxo31 | F-box protein 5 | 6q25.2 | CV:GWASdb CV:PGCnp |
|
| 23658 | LSM5 | YER146W | LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated | 7p14.3 | CV:PGCnp Network |
|
| 4521 | NUDT1 | MTH1 | nudix hydrolase 1 | 7p22 | CV:PGCnp LK:YES |
|
| 948 | CD36 | BDPLT10 | CHDS7 | FAT | GP3B | GP4 | GPIV | PASIV | SCARB3 | CD36 molecule | 7q11.2 | CV:GWASdb CV:PGCnp PMID:cooccur |
|
| 3082 | HGF | DFNB39 | F-TCF | HGFB | HPTA | SF | hepatocyte growth factor | 7q21.1 | CV:PGCnp GO_Annotation PMID:cooccur |
|
| 7036 | TFR2 | HFE3 | TFRC2 | transferrin receptor 2 | 7q22 | CV:PGCnp DMG:Wockner_2014 |
|
| 5577 | PRKAR2B | PRKAR2 | RII-BETA | protein kinase cAMP-dependent type II regulatory subunit beta | 7q22 | CV:PGCnp PMID:cooccur |
CANABINOID DOPAMINE INTRACELLULAR SIGNAL TRANSDUCTION SEROTONIN G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.humanNRC G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet Potential synaptic genes |
| 2146 | EZH2 | ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2 | enhancer of zeste 2 polycomb repressive complex 2 subunit | 7q35-q36 | CV:PGCnp DMG:Wockner_2014 Network |
Chromatin Remodeling Genes |
| 55872 | PBK | CT84 | HEL164 | Nori-3 | SPK | TOPK | PDZ binding kinase | 8p21.2 | CV:PGCnp GSMA_I GSMA_IIA GSMA_IIE Network |
|
| 10395 | DLC1 | ARHGAP7 | HP | STARD12 | p122-RhoGAP | DLC1 Rho GTPase activating protein | 8p22 | CV:GWAScat CV:GWASdb CV:PGCnp GO_Annotation |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 8836 | GGH | GH | gamma-glutamyl hydrolase | 8q12.3 | CV:PGCnp DMG:Jaffe_2016 |
|
| 28957 | MRPS28 | HSPC007 | MRP-S28 | MRP-S35 | MRPS35 | mitochondrial ribosomal protein S28 | 8q21.1-q21.2 | CV:PGCnp DEG:Maycox_2009 |
|
| 2171 | FABP5 | E-FABP | EFABP | KFABP | PA-FABP | PAFABP | fatty acid binding protein 5 | 8q21.13 | CV:GWASdb CV:PGCnp Expression Network PMID:cooccur |
G2Cdb.humanNRC G2Cdb.humanPSD G2Cdb.humanPSP |
| 9134 | CCNE2 | CYCE2 | cyclin E2 | 8q22.1 | DMG:Jaffe_2016 | |
| 9833 | MELK | HPK38 | maternal embryonic leucine zipper kinase | 9p13.2 | CV:PGCnp | |
| 7504 | XK | KX | MCLDS | NA | NAC | X1k | XKR1 | X-linked Kx blood group | Xp21.1 | CV:PGCnp PMID:cooccur |
|