Search results: The pahtwayp1714has 142 genes in the original annotation. Currently, there are 95 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
5264 PHYH LN1 | LNAP1 | PAHX | PHYH1 | RD phytanoyl-CoA 2-hydroxylase 10p13 CV:PGCnp
GO_Annotation
PMID:cooccur
5214 PFKP ATP-PFK | PFK-C | PFK-P | PFKF phosphofructokinase, platelet 10p15.3-p15.2 CV:PGCnp
DMG:Wockner_2014
Network
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9060 PAPSS2 ATPSK2 | BCYM4 | SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 10q24 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
3983 ABLIM1 ABLIM | LIMAB1 | LIMATIN | abLIM-1 actin binding LIM protein 1 10q25 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
2869 GRK5 GPRK5 G protein-coupled receptor kinase 5 10q26.11 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
3632 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A 10q26.3 CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GSMA_IIA
CompositeSet
133 ADM AM | PAMP adrenomedullin 11p15.4 DMG:Jaffe_2016
PMID:cooccur
7106 TSPAN4 NAG-2 | NAG2 | TETRASPAN | TM4SF7 | TSPAN-4 tetraspanin 4 11p15.5 CV:PGCnp
DMG:Wockner_2014
11098 PRSS23 SIG13 | SPUVE | ZSIG13 protease, serine 23 11q14.1 CV:GWASdb
CV:PGCnp
GO_Annotation
928 CD9 BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29 CD9 molecule 12p13.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7421 VDR NR1I1 | PPP1R163 vitamin D (1,25- dihydroxyvitamin D3) receptor 12q13.11 CV:PGCnp
Network
PMID:cooccur
5939 RBMS2 SCR3 RNA binding motif, single stranded interacting protein 2 12q13.3 CV:PGCnp
55743 CHFR RNF116 | RNF196 checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase 12q24.33 CV:PGCnp
1284 COL4A2 ICH | POREN2 collagen type IV alpha 2 13q34 CV:GWAScat
CV:GWASdb
CV:PGCnp
23250 ATP11A ATPIH | ATPIS ATPase phospholipid transporting 11A 13q34 CV:PGCnp
DMG:Wockner_2014
Expression
6038 RNASE4 RAB1 | RNS4 ribonuclease A family member 4 14q11 CV:GWASdb
CV:PGCnp
GSMA_I
4860 PNP NP | PRO1837 | PUNP purine nucleoside phosphorylase 14q13.1 CV:GWAScat
GSMA_I
Network
PMID:cooccur
2353 FOS AP-1 | C-FOS | p55 FBJ murine osteosarcoma viral oncogene homolog 14q24.3 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
2200 FBN1 ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2 fibrillin 1 15q21.1 CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
4091 SMAD6 AOVD2 | HsT17432 | MADH6 | MADH7 SMAD family member 6 15q22.31 CV:PGCnp
DMG:Wockner_2014
9051 PSTPIP1 CD2BP1 | CD2BP1L | CD2BP1S | H-PIP | PAPAS | PSTPIP proline-serine-threonine phosphatase interacting protein 1 15q24.3 CV:PGCnp
GO_Annotation
28232 SLCO3A1 OATP-D | OATP3A1 | OATPD | SLC21A11 solute carrier organic anion transporter family member 3A1 15q26 CV:GWAScat
CV:PGCnp
PMID:cooccur
2013 EMP2 XMP epithelial membrane protein 2 16p13.2 CV:PGCnp
DMG:Montano_2016
10232 MSLN MPF | SMRP mesothelin 16p13.3 CV:PGCnp
DMG:Wockner_2014
65009 NDRG4 BDM1 | SMAP-8 | SMAP8 NDRG family member 4 16q21 CV:PGCnp CompositeSet
Darnell FMRP targets
11060 WWP2 AIP2 | WWp2-like WW domain containing E3 ubiquitin protein ligase 2 16q22.1 CV:PGCnp
DMG:Wockner_2014
81631 MAP1LC3B L ATG8F |C3B | MAP1A/1BLC3 | MAP1LC3B-a microtubule associated protein 1 light chain 3 beta 16q24.2 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5376 PMP22 CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110 peripheral myelin protein 22 17p12 CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
359845 FAM101B CFM1 family with sequence similarity 101 member B 17p13 CV:GWASdb
CV:PGCnp
5187 PER1 PER | RIGUI | hPER period circadian clock 1 17p13.1 CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
3927 LASP1 Lasp-1 | MLN50 LIM and SH3 protein 1 17q11-q21.3 CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
3430 IFI35 IFP35 interferon induced protein 35 17q21 CV:PGCnp
3728 JUP ARVD12 | CTNNG | DP3 | DPIII | PDGB | PKGB junction plakoglobin 17q21 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2535 FZD2 Fz2 | fz-2 | fzE2 | hFz2 frizzled class receptor 2 17q21.31 CV:PGCnp
DMG:Jaffe_2016
4836 NMT1 NMT N-myristoyltransferase 1 17q21.31 CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
Ascano FMRP targets
51226 COPZ2 zeta2-COP coatomer protein complex subunit zeta 2 17q21.32 CV:PGCnp
DMG:Jaffe_2016
3993 LLGL2 HGL | Hugl-2 | LGL2 lethal giant larvae homolog 2, scribble cell polarity complex component 17q25.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
6397 SEC14L1 PRELID4A | SEC14L SEC14 like lipid binding 1 17q25.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG: vanEijk_2014
Expression
CompositeSet
Darnell FMRP targets
9021 SOCS3 ATOD4 | CIS3 | Cish3 | SOCS-3 | SSI-3 | SSI3 抑制细胞因子信号3 17q25.3 CV:PGCnp
PMID:cooccur
9244 CRLF1 CISS | CISS1 | CLF | CLF-1 | NR6 | zcytor5 cytokine receptor-like factor 1 19p12 CV:PGCnp
DMG:Wockner_2014
10365 KLF2 LKLF Kruppel-like factor 2 19p13.11 CV:PGCnp
PMID:cooccur
4125 MAN2B1 LAMAN | MANB mannosidase alpha class 2B member 1 19p13.2 CV:PGCnp
DMG:Montano_2016
29985 SLC39A3 ZIP-3 | ZIP3 solute carrier family 39 member 3 19p13.3 CV:PGCnp
PMID:cooccur
6510 SLC1A5 AAAT | ASCT2 | ATBO | M7V1 | M7VS1 | R16 | RDRC solute carrier family 1 member 5 19q13.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2944 GSTM1 GST1 | GSTM1-1 | GSTM1a-1a | GSTM1b-1b | GTH4 | GTM1 | H-B | MU | MU-1 glutathione S-transferase mu 1 1p13.3 Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
1301 COL11A1 CO11A1 | COLL6 | STL2 collagen type XI alpha 1 1p21 CV:GWASdb
CV:PGCnp
353500 BMP8A - bone morphogenetic protein 8a 1p34.3 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
3399 ID3 HEIR-1 | bHLHb25 inhibitor of DNA binding 3, HLH protein 1p36.13-p36.12 CV:PGCnp
PMID:cooccur
2987 GUK1 GMK guanylate kinase 1 1q32-q41 CV:PGCnp
DMG:Wockner_2014
467 ATF3 - activating transcription factor 3 1q32.3 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2052 EPHX1 EPHX | EPOX | HYL1 | MEH epoxide hydrolase 1 1q42.1 CV:PGCnp
DMG:Wockner_2014
84284 NTPCR C1orf57 | HCR-NTPase nucleoside-triphosphatase, cancer-related 1q42.2 CV:PGCnp
25939 SAMHD1 CHBL2 | DCIP | HDDC1 | MOP-5 | SBBI88 SAM domain and HD domain 1 20pter-q12 CV:PGCnp
DMG:Jaffe_2016
58476 TP53INP2 C20orf110 | DOR | PINH | dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 20q11.22 CV:PGCnp
DMG: vanEijk_2014
351 APP AAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN-II | PN2 amyloid beta precursor protein 21q21.3 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9993 DGCR2 DGS-C | IDD | LAN | SEZ-12 DiGeorge syndrome critical region gene 2 22q11.21 Association
CNV:YES
CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
7078 TIMP3 HSMRK222 | K222 | K222TA2 | SFD TIMP metallopeptidase inhibitor 3 22q12.3 Association
CV:PGCnp
GSMA_I
83439 TCF7L1 TCF-3 | TCF3 transcription factor 7 like 1 2p11.2 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
26056 RAB11FIP5 GAF1 | RIP11 | pp75 RAB11 family interacting protein 5 (class I) 2p13 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
6711 SPTBN1 ELF | HEL102 | SPTB2 | betaSpII spectrin beta, non-erythrocytic 1 2p21 CV:GWASdb
CV:PGCnp
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
6508 SLC4A3 AE3 | SLC2C solute carrier family 4 member 3 2q36 CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
27086 FOXP1 12CC4 | HSPC215 | MFH | QRF1 | hFKH1B forkhead box P1 3p14.1 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
3913 LAMB2 LAMS | NPHS5 laminin subunit beta 2 3p21 CV:PGCnp
GO_Annotation
10491 CRTAP CASP | LEPREL3 | OI7 | P3H5 cartilage associated protein 3p22.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
151887 CCDC80 DRO1 | SSG1 | URB | okuribin coiled-coil domain containing 80 3q13.2 CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
51421 AMOTL2 LCCP angiomotin like 2 3q21-q22 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3693 ITGB5 - 整合素β亚基5 3q21.2 CV:PGCnp
Network
205428 C3orf58 DIA1 | GoPro49 | HASF chromosome 3 open reading frame 58 3q24 CV:PGCnp
DMG:Nishioka_2013
57619 SHROOM3 APXL3 | MSTP013 | SHRM | ShrmL shroom family member 3 4q21.1 CV:PGCnp
CV:PheWAS
Ascano FMRP targets
51316 PLAC8 C15 | DGIC | PNAS-144 | onzin placenta specific 8 4q21.22 CV:PGCnp
DMG:Jaffe_2016
152503 SH3D19 EBP | EVE1 | Kryn | SH3P19 SH3 domain containing 19 4q31.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
6793 STK10 LOK | PRO2729 serine/threonine kinase 10 5q35.1 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
CompositeSet
2030 SLC29A1 ENT1 solute carrier family 29 member 1 6p21.1 CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
780 DDR1 CAK | CD167 | DDR | EDDR1 | HGK2 | MCK10 | NEP | NTRK4 | PTK3 | PTK3A | RTK6 | TRKE discoidin domain receptor tyrosine kinase 1 6p21.3 Association
CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
7148 TNXB EDS3 | HXBL | TENX | TN-X | TNX | TNXB1 | TNXB2 | TNXBS | VUR8 | XB | XBS tenascin XB 6p21.3 Association
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
8347 HIST1H2BC H2B.1 | H2B/l | H2BFL | dJ221C16.3 histone cluster 1, H2bc 6p22.1 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
7280 TUBB2A CDCBM5 | TUBB | TUBB2 tubulin beta 2A class IIa 6p25 CV:PGCnp
GSMA_I
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
27244 SESN1 PA26 | SEST1 sestrin 1 6q21 CV:PGCnp
9590 AKAP12 AKAP250 | SSeCKS A-kinase anchoring protein 12 6q24-q25 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
2887 GRB10 GRB-IR | Grb-10 | IRBP | MEG1 | RSS growth factor receptor bound protein 10 7p12.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
358 AQP1 AQP-CHIP | CHIP28 | CO aquaporin 1 (Colton blood group) 7p14 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
2006 ELN SVAS | WBS | WS elastin 7q11.23 CNV:YES
CV:PGCnp
GO_Annotation
10512 SEMA3C SEMAE | SemE semaphorin 3C 7q21-q31 CV:PGCnp
DMG:Wockner_2014
6717 SRI CP-22 | CP22 | SCN | V19 sorcin 7q21.1 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
1278 COL1A2 OI4 collagen type I alpha 2 7q22.1 CV:GWASdb
CV:PGCnp
3638 INSIG1 CL-6 | CL6 insulin induced gene 1 7q36 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
427 ASAH1 AC | ACDase | ASAH | PHP | PHP32 | SMAPME N-acylsphingosine amidohydrolase (acid ceramidase) 1 8p22 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4023 LPL HDLCQ11 | LIPD lipoprotein lipase 8p22 CV:GWASdb
CV:PGCnp
CV:PheWAS
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
340371 NRBP2 TRG16 | pp9320 nuclear receptor binding protein 2 8q24.3 CV:PGCnp
DMG:Jaffe_2016
8434 RECK ST15 reversion inducing cysteine rich protein with kazal motifs 9p13.3 CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
216 ALDH1A1 ALDC | ALDH-E1 | ALDH1 | ALDH11 | HEL-9 | HEL-S-53e | HEL12 | PUMB1 | RALDH1 aldehyde dehydrogenase 1 family member A1 9q21.13 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
2619 GAS1 - growth arrest specific 1 9q21.3-q22 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
2934 GSN ADF | AGEL gelsolin 9q33 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
6709 SPTAN1 EIEE5 | NEAS | SPTA2 spectrin alpha, non-erythrocytic 1 9q34.11 Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
4851 NOTCH1 AOS5 | AOVD1 | TAN1 | hN1 notch 1 9q34.3 CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets


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