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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group? | Functional group? |
|---|---|---|---|---|---|---|
| 6387 | CXCL12 | IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1 | C-X-C motif chemokine ligand 12 | 10q11.1 | CV:GWAScat CV:GWASdb CV:PGCnp Expression PMID:cooccur |
|
| 22986 | SORCS3 | SORCS | sortilin related VPS10 domain containing receptor 3 | 10q23-q25 | CV:PGCnp GO_Annotation |
|
| 4038 | LRP4 | CLSS | CMS17 | LRP-4 | LRP10 | MEGF7 | SOST2 | LDL receptor related protein 4 | 11p11.2 | CV:PGCnp DMG:Wockner_2014 DNM:Fromer_2014 GO_Annotation PMID:cooccur |
CompositeSet Ascano FMRP targets |
| 55553 | SOX6 | HSSOX6 | SOXD | SRY-box 6 | 11p15.3 | CV:PGCnp PMID:cooccur |
|
| 143425 | SYT9 | - | synaptotagmin 9 | 11p15.4 | CV:PGCnp DNM:McCarthy_2014 GO_Annotation |
EXOCYTOSIS |
| 170589 | GPHA2 | A2 | GPA2 | ZSIG51 | glycoprotein hormone alpha 2 | 11q13.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 1272 | CNTN1 | F3 | GP135 | MYPCN | contactin 1 | 12q12 | CV:PGCnp Network |
CELL ADHESION AND TRANSSYNAPTIC SIGNALING G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet |
| 29951 | PDZRN4 | LNX4 | SAMCAP3L | PDZ domain containing ring finger 4 | 12q12 | CV:PGCnp CV:PheWAS |
|
| 8848 | TSC22D1 | Ptg-2 | TGFB1I4 | TSC22 | TSC22 domain family member 1 | 13q14 | CV:PGCnp DMG:Nishioka_2013 Network |
CompositeSet Darnell FMRP targets |
| 22821 | RASA3 | GAP1IP4BP | GAPIII | RAS p21 protein activator 3 | 13q34 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 |
|
| 5587 | PRKD1 | PKC-MU | PKCM | PKD | PRKCM | protein kinase D1 | 14q11 | CV:GWAScat CV:PGC128 CV:PGCnp GSMA_I |
|
| 677 | ZFP36L1 | BRF1 | Berg36 | ERF-1 | ERF1 | RNF162B | TIS11B | cMG1 | ZFP36 ring finger protein-like 1 | 14q24.1 | CV:PGCnp CV:PheWAS DMG:Jaffe_2016 |
|
| 9369 | NRXN3 | C14orf60 | neurexin 3 | 14q31 | CV:GWASdb CV:PGCnp GO_Annotation PMID:cooccur |
CELL ADHESION AND TRANSSYNAPTIC SIGNALING G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet Darnell FMRP targets |
| 4016 | LOXL1 | LOL | LOXL | lysyl oxidase like 1 | 15q22 | CV:PGCnp CV:PheWAS |
|
| 64506 | CPEB1 | CPE-BP1 | CPEB | CPEB-1 | h-CPEB | hCPEB-1 | cytoplasmic polyadenylation element binding protein 1 | 15q25.2 | CV:PGCnp GO_Annotation |
|
| 439921 | MXRA7 | PS1TP1 | TMAP1 | matrix-remodelling associated 7 | 17q25.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 4884 | NPTX1 | NP1 | neuronal pentraxin 1 | 17q25.3 | CV:PGCnp DMG:Wockner_2014 GO_Annotation PMID:cooccur |
INTRACELLULAR SIGNAL TRANSDUCTION G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_clathrin G2Cdb.human_Synaptosome Potential synaptic genes |
| 23094 | SIPA1L3 | CTRCT45 | SPAL3 | SPAR3 | signal-induced proliferation-associated 1 like 3 | 19q13.13 | CV:PGCnp DMG:Wockner_2014 |
CompositeSet Darnell FMRP targets |
| 1760 | DMPK | DM | DM1 | DM1PK | DMK | MDPK | MT-PK | dystrophia myotonica protein kinase | 19q13.3 | CV:PGCnp PMID:cooccur |
|
| 6253 | RTN2 | NSP2 | NSPL1 | NSPLI | SPG12 | reticulon 2 | 19q13.32 | DMG:vanEijk_2014 | |
| 65982 | ZSCAN18 | ZNF447 | zinc finger and SCAN domain containing 18 | 19q13.43 | CV:PGCnp DMG:Jaffe_2016 |
|
| 10451 | VAV3 | - | vav guanine nucleotide exchange factor 3 | 1p13.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
|
| 148534 | TMEM56 | - | transmembrane protein 56 | 1p21.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 91624 | NEXN | CMH20 | NELIN | nexilin (F actin binding protein) | 1p31.1 | CV:PGCnp GSMA_IIA |
|
| 9829 | DNAJC6 | DJC6 | PARK19 | DnaJ heat shock protein family (Hsp40) member C6 | 1p31.3 | CV:PGCnp DMG:Jaffe_2016 DNM:Fromer_2014 GSMA_IIA |
RNA AND PROTEIN SYNTHESIS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet Darnell FMRP targets |
| 1600 | DAB1 | - | Dab, reelin signal transducer, homolog 1 (Drosophila) | 1p32-p31 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 GO_Annotation GSMA_IIA Network PMID:cooccur |
|
| 55277 | FGGY | - | FGGY carbohydrate kinase domain containing | 1p32.1 | CV:GWAScat CV:PGCnp |
|
| 6920 | TCEA3 | TFIIS | TFIIS.H | transcription elongation factor A3 | 1p36.12 | CV:GWASdb CV:PGCnp |
|
| 64856 | VWA1 | WARP | von Willebrand factor A domain containing 1 | 1p36.33 | DEG:Zhao_2015 | |
| 5321 | PLA2G4A | PLA2G4 | cPLA2 | cPLA2-alpha | phospholipase A2 group IVA | 1q31.1 | Association CV:PGCnp GO_Annotation GR_Ng GR_WM PMID:cooccur |
G2Cdb.humanNRC G2Cdb.humanPSP |
| 51807 | TUBA8 | TUBAL2 | tubulin alpha 8 | 22q11.1 | Association CV:PGCnp GSMA_I PMID:cooccur |
|
| 25817 | FAM19A5 | QLLK5208 | TAFA-5 | TAFA5 | UNQ5208 | family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 | 22q13.32 | CV:PGCnp DMG:Wockner_2014 |
Ascano FMRP targets |
| 7840 | ALMS1 | ALSS | ALMS1, centrosome and basal body associated protein | 2p13 | CV:PGCnp DNM:Fromer_2014 Expression |
CompositeSet Ascano FMRP targets |
| 785 | CACNB4 | CAB4 | CACNLB4 | EA5 | EIG9 | EJM | EJM4 | EJM6 | calcium voltage-gated channel auxiliary subunit beta 4 | 2q23.3 | CV:PGCnp DMG:Wockner_2014 GSMA_IIA |
CANABINOID DOPAMINE EXCITABILITY METABOTROPIC GLUTAMATE RECEPTOR SEROTONIN CompositeSet |
| 5217 | PFN2 | D3S1319E | PFL | profilin 2 | 3q25.1 | Network | STRUCTURAL PLASTICITY CompositeSet |
| 22998 | LIMCH1 | LIMCH1A | LMO7B | LIM and calponin homology domains 1 | 4p13 | CV:GWASdb CV:PGCnp |
|
| 8987 | STBD1 | GENEX3414 | GENX-3414 | starch binding domain 1 | 4q21.1 | CV:PGCnp | |
| 1363 | CPE | CPH | carboxypeptidase E | 4q32.3 | CV:PGCnp GO_Annotation PMID:cooccur |
CompositeSet Darnell FMRP targets |
| 23022 | PALLD | CGI-151 | CGI151 | MYN | PNCA1 | SIH002 | palladin, cytoskeletal associated protein | 4q32.3 | CV:GWAScat CV:PGCnp Expression PMID:cooccur |
|
| 5734 | PTGER4 | EP4 | EP4R | prostaglandin E receptor 4 | 5p13.1 | CV:GWASdb CV:PGCnp PMID:cooccur |
|
| 2668 | GDNF | ATF1 | ATF2 | HFB1-GDNF | HSCR3 | glial cell derived neurotrophic factor | 5p13.1-p12 | Association CV:PGCnp DMG:Wockner_2014 GO_Annotation PMID:cooccur |
|
| 22836 | RHOBTB3 | - | Rho related BTB domain containing 3 | 5q15 | CV:GWASdb CV:PGCnp DMG:Nishioka_2013 Expression PMID:cooccur |
|
| 337876 | CHSY3 | CHSY2 | CSS3 | chondroitin sulfate synthase 3 | 5q23.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 |
Ascano FMRP targets |
| 100127206 | KIAA1024L | - | KIAA1024-like | 5q23.3 | CV:GWASdb CV:PGCnp |
|
| 717 | C2 | ARMD14 | CO2 | complement component 2 | 6p21.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 GO_Annotation GSMA_I PMID:cooccur |
|
| 3662 | IRF4 | LSIRF | MUM1 | NF-EM5 | SHEP8 | interferon regulatory factor 4 | 6p25.3 | CV:GWAScat CV:GWASdb CV:PGCnp DMG:Wockner_2014 GO_Annotation GSMA_I |
|
| 22881 | ANKRD6 | - | ankyrin repeat domain 6 | 6q15 | CV:PGCnp DMG:Wockner_2014 |
|
| 254228 | FAM26E | C6orf188 | dJ493F7.3 | family with sequence similarity 26 member E | 6q22.1 | CV:GWASdb CV:PGCnp |
|
| 84870 | RSPO3 | CRISTIN1 | PWTSR | THSD2 | R-spondin 3 | 6q22.33 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 |
|
| 23345 | SYNE1 | 8B | ARCA1 | C6orf98 | CPG2 | EDMD4 | MYNE1 | Nesp1 | SCAR8 | dJ45H2.2 | spectrin repeat containing, nuclear envelope 1 | 6q25 | CV:GWAScat CV:GWASdb CV:PGCnp DNM:Fromer_2014 DNM:Guipponi_2014 GO_Annotation Network PMID:cooccur |
G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet Darnell FMRP targets |
| 7058 | THBS2 | TSP2 | thrombospondin 2 | 6q27 | CV:PGCnp DMG:Wockner_2014 Expression |
Potential synaptic genes |
| 3486 | IGFBP3 | BP-53 | IBP3 | insulin like growth factor binding protein 3 | 7p12.3 | CV:PGCnp PMID:cooccur |
|
| 23333 | DPY19L1 | - | dpy-19 like 1 (C. elegans) | 7p14.2 | CV:PGCnp | |
| 55033 | FKBP14 | EDSKMH | FKBP22 | IPBP12 | FK506 binding protein 14 | 7p14.3 | CV:PGCnp | |
| 221895 | JAZF1 | TIP27 | ZNF802 | JAZF zinc finger 1 | 7p15.2-p15.1 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 |
|
| 56975 | FAM20C | DMP-4 | DMP4 | GEF-CK | RNS | family with sequence similarity 20 member C | 7p22.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 1278 | COL1A2 | OI4 | collagen type I alpha 2 | 7q22.1 | CV:GWASdb CV:PGCnp |
|
| 4897 | NRCAM | - | neuronal cell adhesion molecule | 7q31 | CV:GWASdb CV:PGCnp GO_Annotation PMID:cooccur |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL CompositeSet |
| 54674 | LRRN3 | FIGLER5 | NLRR-3 | NLRR3 | leucine rich repeat neuronal 3 | 7q31.1 | CV:PGCnp | |
| 5327 | PLAT | T-PA | TPA | plasminogen activator, tissue type | 8p12 | CV:PGCnp DMG:Wockner_2014 Expression GO_Annotation PMID:cooccur |
Potential synaptic genes |
| 2675 | GFRA2 | GDNFRB | NRTNR-ALPHA | NTNRA | RETL2 | TRNR2 | GDNF family receptor alpha 2 | 8p21.3 | CV:PGCnp GO_Annotation GSMA_I GSMA_IIA GSMA_IIE PMID:cooccur |
|
| 767 | CA8 | CA-VIII | CALS | CAMRQ3 | CARP | carbonic anhydrase VIII | 8q12.1 | CV:PGCnp DMG:Nishioka_2013 |
|
| 5569 | PKIA | PRKACN1 | protein kinase (cAMP-dependent, catalytic) inhibitor alpha | 8q21.12 | CV:PGCnp PMID:cooccur |
|
| 4982 | TNFRSF11B | OCIF | OPG | PDB5 | TR1 | tumor necrosis factor receptor superfamily member 11b | 8q24 | CV:PGCnp CV:PheWAS |
|
| 1993 | ELAVL2 | HEL-N1 | HELN1 | HUB | ELAV like neuron-specific RNA binding protein 2 | 9p21 | CV:GWASdb CV:PGCnp PMID:cooccur |
|
| 79817 | MOB3B | C9orf35 | MOB1D | MOBKL2B | MOB kinase activator 3B | 9p21.2 | CV:PGCnp | |
| 9630 | GNA14 | - | G protein subunit alpha 14 | 9q21 | CV:PGCnp DMG:Jaffe_2016 |
G-PROTEIN RELAY METABOTROPIC GLUTAMATE RECEPTOR |
| 1757 | SARDH | BPR-2 | DMGDHL1 | SAR | SARD | SDH | sarcosine dehydrogenase | 9q33-q34 | CV:PGCnp DMG:Wockner_2014 Expression |
|
| 30011 | SH3KBP1 | CD2BP3 | CIN85 | GIG10 | HSB-1 | HSB1 | MIG18 | SH3-domain kinase binding protein 1 | Xp22.1-p21.3 | CV:GWASdb CV:PGCnp GO_Annotation Network |
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.humanPSD G2Cdb.humanPSP Potential synaptic genes |
| 2824 | GPM6B | M6B | glycoprotein M6B | Xp22.2 | CV:PGCnp DEG:Zhao_2015 GO_Annotation |
CELL ADHESION AND TRANSSYNAPTIC SIGNALING Potential synaptic genes |
| 367 | AR | AIS | AR8 | DHTR | HUMARA | HYSP1 | KD | NR3C4 | SBMA | SMAX1 | TFM | androgen receptor | Xq12 | Association CV:PGCnp GO_Annotation GR_Ng Network PMID:cooccur |
|
| 3561 | IL2RG | CD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1 | interleukin 2 receptor subunit gamma | Xq13.1 | PMID:cooccur | |
| 6594 | SMARCA1 | ISWI | NURF140 | SNF2L | SNF2L1 | SNF2LB | SNF2LT | SWI | SWI2 | hSNF2L | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 | Xq25 | CV:PGCnp GO_Annotation PMID:cooccur |
Ascano FMRP targets Chromatin Remodeling Genes |