Search results: The pahtwayp1741has 115 genes in the original annotation. Currently, there are 78 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
2625 GATA3 HDR | HDRS GATA binding protein 3 10p15 CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
3422 IDI1 IPP1 | IPPI1 isopentenyl-diphosphate delta isomerase 1 10p15.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
6387 CXCL12 IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1 C-X-C motif chemokine ligand 12 10q11.1 CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
23234 DNAJC9 HDJC9 | JDD1 | SB73 DnaJ heat shock protein family (Hsp40) member C9 10q22.2 DMG:Wockner_2014
PMID:cooccur
9748 SLK LOSK | STK2 | bA16H23.1 | se20-9 STE20 like kinase 10q24.33 CV:PGCnp
DMG:Jaffe_2016
2620 GAS2 - growth arrest specific 2 11p14.3 CV:PGCnp
PMID:cooccur
283120 H19 ASM | ASM1 | BWS | D11S813E | LINC00008 | NCRNA00008 | WT2 H19, imprinted maternally expressed transcript (non-protein coding) 11p15.5 CV:PGCnp
PMID:cooccur
3992 FADS1 D5D | FADS6 | FADSD5 | LLCDL1 | TU12 脂肪酸desaturase 1 11q12.2-q13.1 DEG:Sanders_2013
PMID:cooccur
6484 ST3GAL4 CGS23 | NANTA3 | SAT3 | SIAT4 | SIAT4C | ST3GalIV | STZ ST3 beta-galactoside alpha-2,3-sialyltransferase 4 11q24.2 CV:PGCnp
51433 ANAPC5 APC5 anaphase promoting complex subunit 5 12q24.31 CV:PGCnp
DNM:Fromer_2014
CompositeSet
675 BRCA2 BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11 breast cancer 2 13q12.3 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
5983 RFC3 RFC38 replication factor C subunit 3 13q13.2 CV:PGCnp
DMG:Jaffe_2016
22821 RASA3 GAP1IP4BP | GAPIII RAS p21 protein activator 3 13q34 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
11169 WDHD1 AND-1 | AND1 | CHTF4 | CTF4 WD repeat and HMG-box DNA binding protein 1 14q22.2 CV:PGCnp Ascano FMRP targets
1396 CRIP1 CRHP | CRIP | CRP-1 | CRP1 cysteine rich protein 1 14q32.33 DMG:Wockner_2014
55038 CDCA4 HEPP | SEI-3/HEPP cell division cycle associated 4 14q32.33 DMG:Wockner_2014
2628 GATM AGAT | AT | CCDS3 glycine amidinotransferase 15q21.1 DMG:Wockner_2014
5371 PML MYL | PP8675 | RNF71 | TRIM19 promyelocytic leukemia 15q22 CV:PGCnp
DNM:Xu_2012
Network
PMID:cooccur
CompositeSet
1381 CRABP1 CRABP | CRABP-I | CRABPI | RBP5 cellular retinoic acid binding protein 1 15q24 CV:PGCnp
3418 IDH2 D2HGA2 | ICD-M | IDH | IDHM | IDP | IDPM | mNADP-IDH isocitrate dehydrogenase 2 (NADP+), mitochondrial 15q26.1 CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
865 CBFB PEBP2B core-binding factor, beta subunit 16q22.1 CV:PGCnp
DMG:Wockner_2014
81620 CDT1 DUP | RIS2 chromatin licensing and DNA replication factor 1 16q24.3 CV:PGCnp
7153 TOP2A TOP2 | TP2A topoisomerase (DNA) II alpha 17q21.2 CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
4591 TRIM37 MUL | POB1 | TEF3 tripartite motif containing 37 17q23.2 CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
84733 CBX2 CDCA6 | M33 | SRXY5 chromobox 2 17q25.3 CV:GWASdb
CV:PGCnp
Expression
Ascano FMRP targets
Chromatin Remodeling Genes
1786 DNMT1 ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaI DNA (cytosine-5-)-methyltransferase 1 19p13.2 CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
4784 NFIX MRSHSS | NF1A | SOTOS2 nuclear factor I/X (CCAAT-binding transcription factor) 19p13.3 CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
29128 UHRF1 ICBP90 | Np95 | RNF106 | TDRD22 | hNP95 | hUHRF1 | huNp95 ubiquitin like with PHD and ring finger domains 1 19p13.3 CV:PGCnp
DMG:Wockner_2014
7515 XRCC1 RCC X-ray repair complementing defective repair in Chinese hamster cells 1 19q13.2 Association
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
5424 POLD1 CDC2 | CRCS10 | MDPL | POLD polymerase (DNA) delta 1, catalytic subunit 19q13.3 CV:PGCnp
DMG:Wockner_2014
Expression
6510 SLC1A5 AAAT | ASCT2 | ATBO | M7V1 | M7VS1 | R16 | RDRC solute carrier family 1 member 5 19q13.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
125965 COX6B2 COXVIB2 | CT59 cytochrome c oxidase subunit 6B2 19q13.42 CV:PGCnp
DMG:Wockner_2014
9202 ZMYM4 CDIR | MYM | ZNF198L3 | ZNF262 zinc finger MYM-type containing 4 1p32-p34 CV:PGCnp
CV:PheWAS
22955 SCMH1 Scml3 sex comb on midleg homolog 1 (Drosophila) 1p34 CV:PGCnp Chromatin Remodeling Genes
3925 STMN1 C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMN stathmin 1 1p36.11 CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
5111 PCNA ATLD2 proliferating cell nuclear antigen 20 pter-p12 Network
PMID:cooccur
5933 RBL1 CP107 | PRB1 | p107 retinoblastoma-like 1 20q11.2 CV:PGCnp
DMG:Jaffe_2016
4047 LSS CTRCT44 | OSC lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 21q22.3 CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
6382 SDC1 CD138 | SDC | SYND1 | syndecan syndecan 1 2p24.1 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
23397 NCAPH BRRN1 | CAP-H non-SMC condensin I complex subunit H 2q11.2 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9173 IL1RL1 DER4 |健康-1 | IL33R | ST2 | ST2L | ST2V | T1 interleukin 1 receptor like 1 2q12 CV:GWASdb
CV:PGCnp
GSMA_I
56475 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator candidate 2q23.3 CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_IIA
83879 CDCA7 JPO1 cell division cycle associated 7 2q31 CV:PGCnp
DNM:Fromer_2014
CompositeSet
4664 NAB1 - NGFI-A binding protein 1 2q32.3-q33 CV:PGCnp
27086 FOXP1 12CC4 | HSPC215 | MFH | QRF1 | hFKH1B forkhead box P1 3p14.1 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
5627 PROS1 PROS | PS21 | PS22 | PS23 | PS24 | PS25 | PSA | THPH5 | THPH6 protein S (alpha) 3q11.2 CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
7884 SLBP HBP stem-loop binding protein 4p16.3 CV:PGCnp
DMG:Wockner_2014
5156 PDGFRA CD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRA platelet derived growth factor receptor alpha 4q12 CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
79071 ELOVL6 FACE | FAE | LCE ELOVL fatty acid elongase 6 4q25 CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
27123 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 4q25 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6423 SFRP2 FRP-2 | SARP1 | SDF-5 secreted frizzled-related protein 2 4q31.3 CV:PGCnp
9180 OSMR OSMRB | PLCA1 oncostatin M receptor 5p13.1 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
1462 VCAN CSPG2 | ERVR | GHAP | PG-M | WGN | WGN1 versican 5q14.3 CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
4124 MAN2A1 AMan II | GOLIM7 | MANA2 | MANII mannosidase alpha class 2A member 1 5q21.3 CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1958 EGR1 AT225 | G0S30 | KROX-24 | NGFI-A | TIS8 | ZIF-268 | ZNF225 early growth response 1 5q31.1 CV:PGCnp
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
6444 SGCD 35DAG | CMD1L | DAGD | SG-delta | SGCDP | SGD sarcoglycan delta 5q33.3 CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1026 CDKN1A CAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1 cyclin-dependent kinase inhibitor 1A 6p21.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
3303 HSPA1A HEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1 heat shock protein family A (Hsp70) member 1A 6p21.3 CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
2697 GJA1 AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCA gap junction protein alpha 1 6q22.31 CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
39 ACAT2 - acetyl-CoA acetyltransferase 2 6q25.3 CV:PGCnp
PMID:cooccur
3482 IGF2R CD222 | CI-M6PR | CIMPR | M6P-R | M6P/IGF2R | MPR 300 | MPR1 | MPR300 | MPRI 胰岛素样生长因子2receptor 6q26 CV:PGCnp
DMG:Montano_2016
PMID:cooccur
Ascano FMRP targets
358 AQP1 AQP-CHIP | CHIP28 | CO aquaporin 1 (Colton blood group) 7p14 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
3207 HOXA11 HOX1 | HOX1I | RUSAT1 homeobox A11 7p15.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
9265 CYTH3 ARNO3 | GRP1 | PSCD3 cytohesin 3 7p22.1 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
Potential synaptic genes
27445 PCLO ACZ | PCH3 piccolo presynaptic cytomatrix protein 7q21.11 CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
1595 CYP51A1 CP51 | CYP51 | CYPL1 | LDM | P450-14DM | P450L1 cytochrome P450 family 51 subfamily A member 1 7q21.2 DMG:Jaffe_2016
DMG:Wockner_2014
4176 MCM7 CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104 minichromosome maintenance complex component 7 7q21.3-q22.1 DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
835 CASP2 CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57 caspase 2 7q34-q35 CV:PGCnp
2146 EZH2 ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit 7q35-q36 CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
2936 GSR HEL-75 | HEL-S-122m glutathione reductase 8p21.1 CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
285 ANGPT2 AGPT2 | ANG2 angiopoietin 2 8p23.1 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2222 FDFT1 DGPT | ERG9 | SQS | SS farnesyl-diphosphate farnesyltransferase 1 8p23.1-p22 CV:PGCnp
DMG:Jaffe_2016
11075 STMN2 SCG10 | SCGN10 stathmin 2 8q21.13 CV:GWASdb
CV:PGCnp
GO_Annotation
340419 RSPO2 CRISTIN2 R-spondin 2 8q23.1 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6713 SQLE - squalene epoxidase 8q24.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
9314 KLF4 EZF | GKLF Kruppel-like factor 4 (gut) 9q31 CV:PGCnp
PMID:cooccur
Ascano FMRP targets
1759 DNM1 DNM | EIEE31 dynamin 1 9q34 CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Darnell FMRP targets
Potential synaptic genes
5277 PIGA GPI3 | MCAHS2 | PIG-A | PNH1 phosphatidylinositol glycan anchor biosynthesis class A Xp22.1 DMG:vanEijk_2014


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