Search results: The pahtwayp1771has 170 genes in the original annotation. Currently, there are 115 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
89846 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 - CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
220965 FAM13C FAM13C1 family with sequence similarity 13 member C 10q21.1 CV:GWASdb
CV:PGCnp
DNM:Xu_2012
CompositeSet
55749 CCAR1 - cell division cycle and apoptosis regulator 1 10q21.3 CV:PGCnp
55506 H2AFY2 macroH2A2 H2A histone family member Y2 10q22.1 CV:PGCnp
DMG:Jaffe_2016
9184 BUB3 BUB3L | hBUB3 BUB3 mitotic checkpoint protein 10q26 CV:GWAScat
CV:PGCnp
GSMA_IIA
8519 IFITM1 9-27 | CD225 | DSPA2a | IFI17 | LEU13 interferon induced transmembrane protein 1 11p15.5 DMG:Montano_2016
Expression
PMID:cooccur
10410 IFITM3 1-8U | DSPA2b | IP15 interferon induced transmembrane protein 3 11p15.5 CV:PGCnp
DEG:Sanders_2013
Expression
PMID:cooccur
29850 TRPM5 LTRPC5 | MTR1 transient receptor potential cation channel subfamily M member 5 11p15.5 CV:PGCnp
DMG:Wockner_2014
26229 B3GAT3 GLCATI | glcUAT-I beta-1,3-glucuronyltransferase 3 11q12.3 DMG:vanEijk_2014
8722 CTSF CATSF | CLN13 cathepsin F 11q13 CV:PGCnp
89 ACTN3 - actinin alpha 3 (gene/pseudogene) 11q13.1 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
1374 CPT1A CPT1 | CPT1-L | L-CPT1 carnitine palmitoyltransferase 1A 11q13.2 CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Expression
PMID:cooccur
51290 ERGIC2 CDA14 | Erv41 | PTX1 | cd002 ERGIC and golgi 2 12p11.22 CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
4891 SLC11A2 DCT1 | DMT1 | NRAMP2 solute carrier family 11 member 2 12q13 CV:PGCnp
PMID:cooccur
25766 PRPF40B HYPC pre-mRNA processing factor 40 homolog B 12q13.12 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
5571 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 12q13.12 CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
2583 B4GALNT1 GALGT | GALNACT | GalNAc-T | SPG26 beta-1,4-N-acetyl-galactosaminyltransferase 1 12q13.3 CV:PGCnp
DMG:Wockner_2014
55504 TNFRSF19 泰姬酒店| TAJ-alpha |贸易|特洛伊 tumor necrosis factor receptor superfamily member 19 13q12.11-q12.3 CV:PGCnp
CV:PheWAS
23143 LRCH1 CHDC1 | NP81 leucine-rich repeats and calponin homology (CH) domain containing 1 13q14.11 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
84078 KBTBD7 - kelch repeat and BTB domain containing 7 13q14.11 DMG:Nishioka_2013
144811 LACC1 C13orf31 laccase domain containing 1 13q14.11 CV:PGCnp
22862 FNDC3A FNDC3 | HUGO | bA203I16.1 | bA203I16.5 fibronectin type III domain containing 3A 13q14.2 CV:PGCnp
DMG:vanEijk_2014
11278 KLF12 AP-2rep | AP2REP | HSPC122 Kruppel-like factor 12 13q22 CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
CompositeSet
9071 CLDN10 CPETRL3 | OSP-L claudin 10 13q31-q34 CV:PGCnp
GO_Annotation
5611 DNAJC3 ACPHD | ERdj6 | HP58 | P58 | P58IPK | PRKRI DnaJ heat shock protein family (Hsp40) member C3 13q32.1 CV:PGCnp
9147 NEMF NY-CO-1 | SDCCAG1 nuclear export mediator factor 14q22 CV:PGCnp
DMG:Jaffe_2016
11183 MAP4K5 GCKR | KHS | KHS1 | MAPKKKK5 mitogen-activated protein kinase kinase kinase kinase 5 14q22.1 CV:PGCnp
1112 FOXN3 C14orf116 | CHES1 | PRO1635 forkhead box N3 14q31.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23368 PPP1R13B ASPP1 | p53BP2-like | p85 protein phosphatase 1 regulatory subunit 13B 14q32.33 CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Ambalavanan_2016
9990 SLC12A6 ACCPN | KCC3 | KCC3A | KCC3B solute carrier family 12 member 6 15q13 CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
54617 INO80 INO80A | INOC1 |嗨NO80 INO80 complex subunit 15q15.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
6095 RORA NR1F1 | ROR1 | ROR2 | ROR3 | RZR-ALPHA | RZRA RAR related orphan receptor A 15q22.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
6210 RPS15A S15a ribosomal protein S15a 16p CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
10232 MSLN MPF | SMRP mesothelin 16p13.3 CV:PGCnp
DMG:Wockner_2014
81831 NETO2 BTCL2 | NEOT2 neuropilin and tolloid like 2 16q11 CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
PMID:cooccur
Potential synaptic genes
55815 TSNAXIP1 TXI1 translin-associated factor X interacting protein 1 16q22.1 CV:PGCnp
DMG:Wockner_2014
5713 PSMD7 MOV34 | P40 | Rpn8 | S12 proteasome 26S subunit, non-ATPase 7 16q22.3 CV:PGCnp
DMG:Wockner_2014
5187 PER1 PER | RIGUI | hPER period circadian clock 1 17p13.1 CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
64359 NXN NRX | TRG-4 nucleoredoxin 17p13.3 CV:PGCnp
DMG:Wockner_2014
79893 GGNBP2 DIF-3 | DIF3 | LCRG1 | LZK1 | ZFP403 | ZNF403 gametogenetin binding protein 2 17q12 CNV:YES
CV:PGCnp
Ascano FMRP targets
27175 TUBG2 - tubulin gamma 2 17q21 CV:PGCnp
DMG:Jaffe_2016
6774 STAT3 ADMIO | APRF | HIES signal transducer and activator of transcription 3 (acute-phase response factor) 17q21.31 CV:PGCnp
CV:PheWAS
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
1353 COX11 COX11P COX11 cytochrome c oxidase copper chaperone 17q22 CV:PGCnp
54757 FAM20A AI1G | AIGFS | FP2747 family with sequence similarity 20 member A 17q24.2 CV:PGCnp
DNM:Fromer_2014
439921 MXRA7 PS1TP1 | TMAP1 matrix-remodelling associated 7 17q25.1 CV:PGCnp
DMG:Wockner_2014
6925 TCF4 E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19 transcription factor 4 18q21.1 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
100124696 TEC - transient erythroblastopenia of childhood 19q13.2 CV:PGCnp
PMID:cooccur
199857 ALG14 CMS15 ALG14, UDP-N-acetylglucosaminyltransferase subunit 1p21.3 CV:PGCnp
23576 DDAH1 DDAH | HEL-S-16 dimethylarginine dimethylaminohydrolase 1 1p22 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
NEUROTRANSMITTER METABOLISM
CompositeSet
676 BRDT BRD6 | CT9 bromodomain testis associated 1p22.1 CV:PGCnp
PMID:cooccur
7161 TP73 P73 tumor protein p73 1p36.3 CV:PGCnp
DMG:Wockner_2014
23248 RPRD2 HSPC099 | KIAA0460 regulation of nuclear pre-mRNA domain containing 2 1q21.3 CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
10763 NES Nbla00170 nestin 1q23.1 CV:PGCnp
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
140609 NEK7 - NIMA related kinase 7 1q31.3 CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
9877 ZC3H11A ZC3HDC11A zinc finger CCCH-type containing 11A 1q32.1 CV:PGCnp
DMG:Wockner_2014
3454 IFNAR1 AVP | IFN-alpha-REC | IFNAR | IFNBR | IFRC interferon alpha and beta receptor subunit 1 21q22.11 CV:PGCnp
DMG:Jaffe_2016
7078 TIMP3 HSMRK222 | K222 | K222TA2 | SFD TIMP metallopeptidase inhibitor 3 22q12.3 Association
CV:PGCnp
GSMA_I
84272 YIPF4 FinGER4 | Nbla11189 Yip1 domain family member 4 2p22.3 CV:PGCnp
DEG:Zhao_2015
1788 DNMT3A DNMT3A2 | M.HsaIIIA | TBRS DNA (cytosine-5-)-methyltransferase 3 alpha 2p23 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
6382 SDC1 CD138 | SDC | SYND1 | syndecan syndecan 1 2p24.1 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
23175 LPIN1 PAP1 lipin 1 2p25.1 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
1876 E2F6 E2F-6 E2F transcription factor 6 2p25.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
11250 GPR45 PSP24 | PSP24(ALPHA) | PSP24A G protein-coupled receptor 45 2q11.1-q12 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
84417 C2orf40 ECRG4 chromosome 2 open reading frame 40 2q12.2 CV:PGCnp
GSMA_I
GSMA_IIA
8708 B3GALT1 beta3Gal-T1 Beta-1,3-galactosyltransferase 1 2q24.3 GSMA_IIA
51661 FKBP7 FKBP23 | PPIase FK506 binding protein 7 2q31.2 DMG:Nishioka_2013
4760 NEUROD1 BETA2 | BHF-1 | MODY6 | NEUROD | bHLHa3 neuronal differentiation 1 2q32 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
10290 SPEG APEG-1 | APEG1 | BPEG | CNM5 | SPEGalpha | SPEGbeta SPEG complex locus 2q35 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
26018 LRIG1 LIG-1 | LIG1 leucine-rich repeats and immunoglobulin-like domains 1 3p14 CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
11180 WDR6 - WD repeat domain 6 3p21.31 CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Darnell FMRP targets
4690 NCK1 NCK | NCKalpha | nck-1 NCK adaptor protein 1 3q21 CV:PGCnp
GO_Annotation
Network
10274 STAG1 SA1 | SCC3A stromal antigen 1 3q22.3 CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Xu_2012
CompositeSet
253461 ZBTB38 CIBZ | PPP1R171 | ZNF921 zinc finger and BTB domain containing 38 3q23 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5290 PIK3CA CLOVE | CWS5 | MCAP | MCM | MCMTC | PI3K | p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha 3q26.3 CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
7006 TEC PSCTK4 tec protein tyrosine kinase 4p12 CV:PGCnp
PMID:cooccur
7358 UGDH GDH | UDP-GlcDH | UDPGDH | UGD UDP-glucose 6-dehydrogenase 4p15.1 DMG:Wockner_2014
PMID:cooccur
254251 LCORL MLR1 ligand dependent nuclear receptor corepressor like 4p15.31 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10336 PCGF3 DONG1 | RNF3 | RNF3A polycomb group ring finger 3 4p16.3 CV:PGCnp
DMG:Wockner_2014
3627 CXCL10 C7 | IFI10 | INP10 | IP-10 | SCYB10 | crg-2 | gIP-10 | mob-1 C-X-C motif chemokine ligand 10 4q21 CV:PGCnp
PMID:cooccur
10611 PDLIM5 ENH | ENH1 | L9 | LIM PDZ and LIM domain 5 4q22 Association
CV:PGCnp
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
7323 UBE2D3 E2(17)KB3 | UBC4/5 | UBCH5C ubiquitin conjugating enzyme E2 D3 4q24 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
27071 DAPP1 BAM32 dual adaptor of phosphotyrosine and 3-phosphoinositides 4q25-q27 CV:PGCnp
79633 FAT4 CDHF14 | CDHR11 | FAT-J | FATJ | HKLLS2 | NBLA00548 | VMLDS2 FAT atypical cadherin 4 4q28.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
256471 MFSD8 CCMD | CLN7 major facilitator superfamily domain containing 8 4q28.2 DMG:Jaffe_2016
23037 PDZD2 AIPC | PAPIN | PDZK3 | PIN1 PDZ domain containing 2 5p13.3 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
4214 MAP3K1 MAPKKK1 | MEKK | MEKK 1 | MEKK1 | SRXY6 mitogen-activated protein kinase kinase kinase 1 5 q11.2 CV:PGCnp
DMG:Montano_2016
Network
167153 PAPD4 GLD2 | TUT2 PAP associated domain containing 4 5q14.1 CV:PGCnp
DMG:vanEijk_2014
Expression
6932 TCF7 TCF-1 transcription factor 7 (T-cell specific, HMG-box) 5q31.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
153527 ZMAT2 Ptg-12 | Snu23 zinc finger matrin-type 2 5q31.3 CV:PGCnp
GSMA_I
1452 CSNK1A1 CK1 | CK1a | CKIa | HEL-S-77p | HLCDGP1 | PRO2975 casein kinase 1 alpha 1 5q32 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
4794 NFKBIE IKBE NFKB inhibitor epsilon 6p21.1 CV:PGCnp
GSMA_IIE
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
4739 NEDD9 CAS-L | CAS2 | CASL | CASS2 | HEF1 neural precursor cell expressed, developmentally down-regulated 9 6p24.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
6239 RREB1 FINB | HNT | LZ321 | RREB-1 | Zep-1 ras responsive element binding protein 1 6p25 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
8899 PRPF4B PR4H | PRP4 | PRP4H | PRP4K | dJ1013A10.1 pre-mRNA processing factor 4B 6p25.2 CV:PGCnp
GSMA_I
55023 PHIP BRWD2 | DCAF14 | WDR11 | ndrp pleckstrin homology domain interacting protein 6q14 CV:PGCnp
DMG:Wockner_2014
83699 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 6q14.1 CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
167838 TXLNB C6orf198 | LST001 | MDP77 | dJ522B19.2 taxilin beta 6q24.1 CV:PGCnp
55033 FKBP14 EDSKMH | FKBP22 | IPBP12 FK506 binding protein 14 7p14.3 CV:PGCnp
3955 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 7p22.2 CV:PGCnp
DMG:Wockner_2014
155368 WBSCR27 - Williams Beuren syndrome chromosome region 27 7q11.23 CNV:YES
CV:PGCnp
DMG:Jaffe_2016
813 CALU - calumenin 7q32.1 CV:PGCnp
DMG:Jaffe_2016
27010 TPK1 HTPK1 | PP20 | THMD5 thiamin pyrophosphokinase 1 7q34-q35 CV:PGCnp
DMG:Jaffe_2016
83595 SOX7 - SRY-box 7 8p23.1 CV:PGCnp G2Cdb.humanPSD
G2Cdb.humanPSP
7534 YWHAZ 14-3-3-zeta | HEL-S-3 | HEL-S-93 | HEL4 | KCIP-1 | YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 8q23.1 Association
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
5339 PLEC EBS1 | EBSMD | EBSND | EBSO | EBSOG | EBSPA | HD1 | LGMD2Q | PCN | PLEC1 | PLEC1b | PLTN plectin 8q24 CV:PGCnp STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
22827 PUF60 FIR | RoBPI | SIAHBP1 | VRJS poly(U) binding splicing factor 60KDa 8q24.3 CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
10497 UNC13B MUNC13 | UNC13 | Unc13h2 unc-13 homolog B (C. elegans) 9p13.3 CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Ascano FMRP targets
51510 CHMP5 C9orf83 | CGI-34 | HSPC177 | PNAS-2 | SNF7DC2 | Vps60 charged multivesicular body protein 5 9p13.3 CV:PGCnp
5789 PTPRD HPTP | HPTPD | HPTPDELTA | PTPD | RPTPDELTA protein tyrosine phosphatase, receptor type D 9p23-p24.3 CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
169792 GLIS3 ZNF515 GLIS family zinc finger 3 9p24.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
5991 RFX3 - regulatory factor X3 9p24.2 CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
CompositeSet
85301 COL27A1 STLS collagen type XXVII alpha 1 9q32 CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
389792 IER5L bA247A12.2 immediate early response 5-like 9q34.11 CV:PGCnp
89801 PPP1R3F HB2E | R3F protein phosphatase 1 regulatory subunit 3F Xp11.23 CV:PGCnp
PMID:cooccur
Potential synaptic genes
8241 RBM10 DXS8237E | GPATC9 | GPATCH9 | S1-1 | |油布ZRANB5 RNA binding motif protein 10 Xp11.23 CV:PGCnp
PMID:cooccur
Ascano FMRP targets


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