Search results: The pahtwayp1863has 180 genes in the original annotation. Currently, there are 110 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
220213 OTUD1 DUBA7 | OTDC1 OTU deubiquitinase 1 10p12.2 CV:PGCnp
56681 SAR1A SAR1 | SARA1 | Sara | masra2 secretion associated Ras related GTPase 1A 10q22.1 CV:PGCnp
DMG:Nishioka_2013
Network
59 ACTA2 AAT6 | ACTSA | MYMY5 actin, alpha 2, smooth muscle, aorta 10q23.3 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9409 PEX16 PBD8A | PBD8B peroxisomal biogenesis factor 16 11p11.2 CV:PGCnp
55626 AMBRA1 DCAF3 | WDR94 autophagy/beclin-1 regulator 1 11p11.2 CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
91252 SLC39A13 LZT-Hs9 solute carrier family 39 member 13 11p11.2 CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
10944 C11orf58 IMAGE145052 | SMAP chromosome 11 open reading frame 58 11p15.1 CV:PGCnp
9024 BRSK2 C11orf7 | PEN11B | SAD1 | SADA | STK29 BR serine/threonine kinase 2 11p15.5 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
402 ARL2 ARFL2 ADP ribosylation factor like GTPase 2 11q13 DMG:Nishioka_2013
DMG:Wockner_2014
7439 BEST1 ARB | BEST | BMD | RP50 | TU15B | VMD2 bestrophin 1 11q13 CV:PGCnp
DEG:Zhao_2015
116985 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 11q13.4 CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
7225 TRPC6 FSGS2 | TRP6 transient receptor potential cation channel subfamily C member 6 11q22.1 CV:PGCnp
PMID:cooccur
6660 SOX5 L-SOX5 | L-SOX5B | L-SOX5F | LAMSHF SRY-box 5 12p12.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
50515 CHST11 C4ST | C4ST-1 | C4ST1 | HSA269537 carbohydrate (chondroitin 4) sulfotransferase 11 12q CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
57658 CALCOCO1 Cocoa | PP13275 | calphoglin calcium binding and coiled-coil domain 1 12q13.13 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
23426 GRIP1 GRIP glutamate receptor interacting protein 1 12q14.3 CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_mGluR5
Ascano FMRP targets
Potential synaptic genes
8562 DENR DRP | DRP1 | SMAP-3 density-regulated protein 12q24.31 CV:PGCnp
DMG:Jaffe_2016
79676 OGFOD2 - 2-oxoglutarate and iron dependent oxygenase domain containing 2 12q24.31 CV:PGCnp
LK:YES
2954 GSTZ1 GSTZ1-1 | MAAI | MAI glutathione S-transferase zeta 1 14q24.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
5641 LGMN AEP | LGMN1 | PRSC1 legumain 14q32.1 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
7301 TYRO3 BYK | Dtk | Etk-2 | RSE | Rek | Sky | Tif TYRO3 protein tyrosine kinase 15q15 CV:PGCnp
GO_Annotation
PMID:cooccur
5607 MAP2K5 HsT17454 | MAPKK5 | MEK5 | PRKMK5 mitogen-activated protein kinase kinase 5 15q23 CV:PGCnp
597 BCL2A1 ACC-1 | ACC-2 | ACC1 | ACC2 | BCL2L5 | BFL1 | GRS | HBPA1 BCL2 related protein A1 15q24.3 CV:GWASdb
CV:PGCnp
4122 MAN2A2 MANA2X mannosidase alpha class 2A member 2 15q26.1 CV:PGCnp CompositeSet
Darnell FMRP targets
23475 QPRT HEL-S-90n | QPRTase quinolinate phosphoribosyltransferase 16p11.2 CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
83723 FAM57B FP1188 family with sequence similarity 57 member B 16p11.2 CNV:YES
CV:PGCnp
GSMA_IIE
23042 PDXDC1 LP8165 pyridoxal-dependent decarboxylase domain containing 1 16p13.11 CV:PGCnp
GSMA_IIE
Ascano FMRP targets
23162 MAPK8IP3 JIP-3 | JIP3 | JSAP1 | SYD2 | syd mitogen-activated protein kinase 8 interacting protein 3 16p13.3 CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
2775 GNAO1 EIEE17 | G-ALPHA-o | GNAO G protein subunit alpha o1 16q13 Association
CV:PGCnp
DMG:Nishioka_2013
DNM:Xu_2012
GO_Annotation
Network
PMID:cooccur
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9114 ATP6V0D1 ATP6D | ATP6DV | P39 | VATX | VMA6 | VPATPD ATPase H+ transporting V0 subunit d1 16q22.1 CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
57546 PDP2 PPM2B | PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 16q22.1 CV:PGCnp
1984 EIF5A EIF-5A | EIF5A1 | eIF5AI eukaryotic translation initiation factor 5A 17p13-p12 CV:PGCnp
84268 RPAIN HRIP | RIP RPA interacting protein 17p13.2 CV:PGCnp
DMG:Jaffe_2016
10693 CCT6B CCT-zeta-2 | CCTZ-2 | Cctz2 | TCP-1-zeta-2 | TSA303 chaperonin containing TCP1 subunit 6B 17q12 CV:PGCnp
DMG:Jaffe_2016
91603 ZNF830 CCDC16 | OMCG1 zinc finger protein 830 17q12 CV:PGCnp
DMG:Jaffe_2016
6426 SRSF1 ASF | SF2 | SF2p33 | SFRS1 | SRp30a serine/arginine-rich splicing factor 1 17q22 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10458 BAIAP2 BAP2 | FLAF3 | IRSP53 BAI1 associated protein 2 17q25 CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
11201 POLI RAD30B | RAD3OB polymerase (DNA) iota 18q21.1 CV:PGCnp
PMID:cooccur
83983 TSSK6 CT72 | FKSG82 | SSTK | TSSK4 testis specific serine kinase 6 19p13.11 CV:PGCnp
LK:YES
90480 GADD45GIP1 CKBBP2 | CKbetaBP2 | CRIF1 | MRP-L59 | PLINP | PLINP-1 | PRG6 | Plinp1 GADD45G interacting protein 1 19p13.2 CV:PGCnp
6324 SCN1B ATFB13 | BRGDA5 | GEFSP1 sodium voltage-gated channel beta subunit 1 19q13.1 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
EXCITABILITY
8425 LTBP4 ARCL1C | LTBP-4 | LTBP4L | LTBP4S latent transforming growth factor beta binding protein 4 19q13.1-q13.2 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5184 PEPD PROLIDASE peptidase D 19q13.11 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
348 APOE AD2 | APO-E | LDLCQ5 | LPG apolipoprotein E 19q13.2 Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
339327 ZNF546 ZNF49 zinc finger protein 546 19q13.2 CV:PGCnp
DEG:Zhao_2015
8778 SIGLEC5 CD170 | CD33L2 | OB-BP2 | OBBP2 | SIGLEC-5 sialic acid binding Ig like lectin 5 19q13.3 CV:GWASdb
CV:PGCnp
8761 PABPC4 APP-1 | APP1 | PABP4 | iPABP 保利(A)结合蛋白、胞质4(诱导form) 1p34.2 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
284654 RSPO1 CRISTIN3 | RSPO R-spondin 1 1p34.3 CV:PGCnp
DMG:Jaffe_2016
51441 YTHDF2 CAHL | HGRG8 | NY-REN-2 YTH N(6)-methyladenosine RNA binding protein 2 1p35 CV:PGCnp
10277 UBE4B E4 | HDNB1 | UBOX3 | UFD2 | UFD2A ubiquitination factor E4B 1p36.3 CV:PGCnp
DMG:Jaffe_2016
2629 GBA GBA1 | GCB | GLUC glucosidase, beta, acid 1q21 CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
7170 TPM3 CAPM1 | CFTD | HEL-189 | HEL-S-82p | NEM1 | OK/SW-cl.5 | TM-5 | TM3 | TM30 | TM30nm | TM5 | TPMsk3 | TRK | hscp30 tropomyosin 3 1q21.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
90780 PYGO2 1190004M21Rik pygopus family PHD finger 2 1q21.3 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
7371 UCK2 TSA903 | UK | UMPK uridine-cytidine kinase 2 1q23 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
58 ACTA1 ACTA | ASMA | CFTD | CFTD1 | CFTDM | MPFD | NEM1 | NEM2 | NEM3 | SHPM actin, alpha 1, skeletal muscle 1q42.13 CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
10137 RBM12 HRIHFB2091 | SWAN RNA binding motif protein 12 20q11.21 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
84557 MAP1LC3A ATG8E | LC3 | LC3A | MAP1ALC3 | MAP1BLC3 microtubule associated protein 1 light chain 3 alpha 20q11.22 CV:PGCnp CompositeSet
7529 YWHAB GW128 | HEL-S-1 | HS1 | KCIP-1 | YWHAA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 20q13.1 CV:PGCnp
DMG:Wockner_2014
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
57642 COL20A1 bA261N11.4 collagen type XX alpha 1 20q13.33 CV:PGCnp
351 APP AAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN-II | PN2 amyloid beta precursor protein 21q21.3 CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6647 SOD1 ALS | ALS1 | HEL-S-44 | IPOA | SOD | hSod1 | homodimer superoxide dismutase 1, soluble 21q22.11 CV:PGCnp
GO_Annotation
PMID:cooccur
23181 DIP2A C21orf106 | DIP2 disco interacting protein 2 homolog A 21q22.3 CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
51807 TUBA8 TUBAL2 tubulin alpha 8 22q11.1 Association
CV:PGCnp
GSMA_I
PMID:cooccur
65078 RTN4R NGR | NOGOR reticulon 4 receptor 22q11.21 Association
CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
23467 NPTXR NPR neuronal pentraxin receptor 22q13.1 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11252 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 22q13.2-q13.33 CV:PGCnp
DEG:Sanders_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
9801 MRPL19 L19mt | MRP-L15 | MRP-L19 | MRPL15 | RLX1 | RPML15 mitochondrial ribosomal protein L19 2p11.1-q11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
1639 DCTN1 DAP-150 | DP-150 | P135 dynactin subunit 1 2p13 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
150962 PUS10 CCDC139 | DOBI pseudouridylate synthase 10 2p16.1 CV:PGCnp
CV:PheWAS
805 CALM2 CAMII | LQT15 | PHKD | PHKD2 | caM calmodulin 2 (phosphorylase kinase, delta) 2p21 CV:PGCnp INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
4613 MYCN MODED | N-myc | NMYC | ODED | bHLHe37 v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 2p24.3 CV:PGCnp
DMG:Jaffe_2016
51252 FAM178B - family with sequence similarity 178 member B 2q11.2 CV:PGCnp
3899 AFF3 LAF4 | MLLT2-like AF4/FMR2 family member 3 2q11.2-q12 CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
80210 ARMC9 ARM | KU-MEL-1 | NS21 armadillo repeat containing 9 2q37.1 CV:PGCnp
DNM:McCarthy_2014
1524 CX3CR1 CCRL1 | CMKBRL1 | CMKDR1 | GPR13 | GPRV28 | V28 C-X3-C motif chemokine receptor 1 3p21.3 CV:PGCnp
PMID:cooccur
3708 ITPR1 ACV | CLA4 | INSP3R1 | IP3R | IP3R1 | PPP1R94 | SCA15 | SCA16 | SCA29 inositol 1,4,5-trisphosphate receptor type 1 3p26.1 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
116064 LRRC58 - leucine rich repeat containing 58 3q13.33 CV:PGCnp
DMG:Jaffe_2016
1356 CP CP-2 ceruloplasmin (ferroxidase) 3q23-q25 CV:PGCnp
PMID:cooccur
347 APOD - apolipoprotein D 3q29 CV:PGCnp
PMID:cooccur
CompositeSet
255758 TCTEX1D2 - Tctex1 domain containing 2 3q29 CNV:YES
CV:PGCnp
6649 SOD3 EC-SOD superoxide dismutase 3, extracellular 4p15.2 CV:PGCnp
55646 LYAR ZC2HC2 | ZLYAR Ly1 antibody reactive 4p16.3 CV:PGCnp
10983 CCNI CCNI1 | CYC1 | CYI cyclin I 4q21.1 CV:PGCnp
DMG:Wockner_2014
51316 PLAC8 C15 | DGIC | PNAS-144 | onzin placenta specific 8 4q21.22 CV:PGCnp
DMG:Jaffe_2016
6696 SPP1 BNSP | BSPI | ETA-1 | OPN secreted phosphoprotein 1 4q22.1 CV:PGCnp
CV:PheWAS
55314 TMEM144 - transmembrane protein 144 4q32.1 CV:PGCnp
DMG:Wockner_2014
Expression
55100 WDR70 - WD repeat domain 70 5p13.2 CV:GWASdb
CV:PGCnp
4208 MEF2C C5DELq14.3 | DEL5q14.3 myocyte enhancer factor 2C 5q14.3 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
5314 PKHD1 ARPKD | FCYT | TIGM1 polycystic kidney and hepatic disease 1 (autosomal recessive) 6p12.2 CV:GWASdb
CV:PGCnp
GSMA_IIE
PMID:cooccur
6722 SRF MCM1 serum response factor 6p21.1 CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
PMID:cooccur
54209 TREM2 TREM-2 | Trem2a | Trem2b | Trem2c triggering receptor expressed on myeloid cells 2 6p21.1 CV:PGCnp
DNM:Xu_2012
GSMA_I
GSMA_IIE
PMID:cooccur
CompositeSet
7917 BAG6 BAG-6 | BAT3 | D6S52E | G3 BCL2 associated athanogene 6 6p21.3 CV:PGCnp
Expression
GSMA_I
Network
6950 TCP1 CCT-alpha | CCT1 | CCTa | D6S230E | TCP-1-alpha t-complex 1 6q25.3-q26 Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2969 GTF2I BAP135 | BTKAP1 | DIWS | GTFII-I | IB291 | SPIN | TFII-I | WBS | WBSCR6 general transcription factor IIi 7q11.23 CV:PGCnp
Network
PMID:cooccur
440 ASNS ASNSD | TS11 asparagine synthetase (glutamine-hydrolyzing) 7q21.3 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
51412 ACTL6B ACTL6 | BAF53B | arpNalpha actin like 6B 7q22 CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
442721 LMOD2 C-LMOD | CLMOD leiomodin 2 7q31.32 CV:PGCnp
PMID:cooccur
93979 CPA5 - carboxypeptidase A5 7q32 CV:PGCnp
157855 KCNU1 KCNMC1 | KCa5 | KCa5.1 | Kcnma3 | Slo3 potassium calcium-activated channel subfamily U member 1 8p11.23 CV:PGCnp
DNM:Gulsuner_2013
2961 GTF2E2 FE | TF2E2 | TFIIE-B general transcription factor IIE subunit 2 8p12 CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
64641 EBF2 COE2 | EBF-2 | O/E-3 | OE-3 early B-cell factor 2 8p21.2 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
27319 BHLHE22 BHLHB5 | Beta3 | CAGL85 | TNRC20 basic helix-loop-helix family member e22 8q13 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
4683 NBN AT-V1 | AT-V2 | ATV | NBS | NBS1 | P95 nibrin 8q21 CV:PGCnp
25897 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase 8q22 CV:PGCnp
CV:PheWAS
5820 PVT1 LINC00079 | NCRNA00079 | onco-lncRNA-100 Pvt1 oncogene (non-protein coding) 8q24 CV:PGCnp
DMG:Wockner_2014
55234 SMU1 BWD | SMU-1 | fSAP57 smu -1 suppressor of mec-8 and unc-52 homolog (C. elegans) 9p12 CV:PGCnp
5253 PHF2 CENP-35 | GRC5 | JHDM1E PHD finger protein 2 9q22.31 CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
158135 TTLL11 C9orf20 | bA244O19.1 tubulin tyrosine ligase like11 9q33.2 CV:GWASdb
CV:PGCnp
DMG:Montano_2016
PMID:cooccur
393 ARHGAP4 C1 | RGC1 | RhoGAP4 | SrGAP4 | p115 Rho GTPase activating protein 4 Xq28 CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
3654 IRAK1 IRAK | pelle interleukin 1 receptor associated kinase 1 Xq28 CV:PGCnp
Expression
Network
PMID:cooccur
Potential synaptic genes


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