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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group? | Functional group? |
|---|---|---|---|---|---|---|
| 983 | CDK1 | CDC2 | CDC28A | P34CDC2 | cyclin-dependent kinase 1 | 10q21.1 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 GO_Annotation Network |
|
| 56647 | BCCIP | TOK-1 | TOK1 | BRCA2 and CDKN1A interacting protein | 10q26.1 | CV:PGCnp DMG:Jaffe_2016 GSMA_IIA |
|
| 5970 | RELA | NFKB3 | p65 | v-rel avian reticuloendotheliosis viral oncogene homolog A | 11q13 | CV:PGCnp DNM:Ambalavanan_2016 Network PMID:cooccur |
|
| 595 | CCND1 | BCL1 | D11S287E | PRAD1 | U21B31 | cyclin D1 | 11q13 | DMG:Jaffe_2016 Network PMID:cooccur |
|
| 472 | ATM | AT1 | ATA | ATC | ATD | ATDC | ATE | TEL1 | TELO1 | ATM serine/threonine kinase | 11q22-q23 | CV:PGCnp GO_Annotation GSMA_I Network PMID:cooccur |
INTRACELLULAR SIGNAL TRANSDUCTION Ascano FMRP targets |
| 3014 | H2AFX | H2A.X | H2A/X | H2AX | H2A histone family member X | 11q23.3 | CV:PGCnp DMG:Wockner_2014 GSMA_I |
|
| 1111 | CHEK1 | CHK1 | checkpoint kinase 1 | 11q24.2 | CV:GWASdb CV:PGCnp Network PMID:cooccur |
|
| 5830 | PEX5 | PBD2A | PBD2B | PTS1-BP | PTS1R | PXR1 | RCDP5 | peroxisomal biogenesis factor 5 | 12p13.31 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 DMG:Wockner_2014 GO_Annotation |
Ascano FMRP targets |
| 466 | ATF1 | EWS-ATF1 | FUS/ATF-1 | TREB36 | activating transcription factor 1 | 12q13 | CV:PGCnp | |
| 6667 | SP1 | - | Sp1 transcription factor | 12q13.1 | CV:PGCnp Network PMID:cooccur |
|
| 1019 | CDK4 | CMM3 | PSK-J3 | cyclin-dependent kinase 4 | 12q14 | CV:PGCnp DMG:Jaffe_2016 GO_Annotation Network PMID:cooccur |
|
| 4193 | MDM2 | ACTFS | HDMX | hdm2 | MDM2 proto-oncogene | 12q14.3-q15 | CV:PGCnp Network PMID:cooccur |
|
| 8315 | BRAP | BRAP2 | IMP | RNF52 | BRCA1 associated protein | 12q24 | CV:GWASdb CV:PGCnp CV:PheWAS PMID:cooccur |
|
| 675 | BRCA2 | BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11 | breast cancer 2 | 13q12.3 | CV:PGCnp GO_Annotation Network PMID:cooccur |
|
| 5925 | RB1 | OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110 | retinoblastoma 1 | 13q14.2 | CV:PGCnp Network PMID:cooccur |
|
| 4792 | NFKBIA | IKBA | MAD-3 | NFKBI | NFKB inhibitor alpha | 14q13 | CV:GWASdb CV:PGCnp Network |
|
| 207 | AKT1 | AKT | CWS6 | PKB | PKB-ALPHA | PRKBA | RAC | RAC-ALPHA | v-akt murine thymoma viral oncogene homolog 1 | 14q32.32 | Association Core CV:PGCnp DMG:vanEijk_2014 DMG:Wockner_2014 DNM:Fromer_2014 GR_COR GR_Ng GR_WM Network PMID:cooccur |
G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet |
| 701 | BUB1B | BUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1 | BUB1有丝分裂检查点丝氨酸/苏氨酸kinase B | 15q15 | CV:PGCnp DMG:Jaffe_2016 |
|
| 7158 | TP53BP1 | 53BP1 | TDRD30 | TP53 | p202 | p53BP1 | tumor protein p53 binding protein 1 | 15 q15-q21 | CV:PGCnp | G2Cdb.humanNRC G2Cdb.humanPSP Ascano FMRP targets |
| 641 | BLM | BS | RECQ2 | RECQL2 | RECQL3 | Bloom syndrome RecQ like helicase | 15q26.1 | CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
Ascano FMRP targets |
| 5347 | PLK1 | PLK | STPK13 | polo like kinase 1 | 16p12.2 | CV:PGCnp DMG:Jaffe_2016 GSMA_IIE |
|
| 1387 | CREBBP | CBP | KAT3A | RSTS | CREB binding protein | 16p13.3 | CV:PGCnp Network PMID:cooccur |
CompositeSet Darnell FMRP targets Chromatin Remodeling Genes |
| 7014 | TERF2 | TRBF2 | TRF2 | telomeric repeat binding factor 2 | 16q22.1 | CV:PGCnp | |
| 2175 | FANCA | FA | FA-H | FA1 | FAA | FACA | FAH | FANCH | Fanconi anemia complementation group A | 16q24.3 | CV:PGCnp | |
| 7157 | TP53 | BCC7 | LFS1 | P53 | TRP53 | tumor protein p53 | 17p13.1 | Association Core CV:PGCnp GO_Annotation GR_COR GR_Ng GR_WM Network PMID:cooccur |
|
| 6117 | RPA1 | HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70 | replication protein A1 | 17p13.3 | CV:PGCnp DMG:Wockner_2014 |
Ascano FMRP targets |
| 6776 | STAT5A | MGF | STAT5 | signal transducer and activator of transcription 5A | 17q11.2 | CV:PGCnp DMG:Wockner_2014 Network |
|
| 5606 | MAP2K3 | MAPKK3 | MEK3 | MKK3 | PRKMK3 | SAPKK-2 | SAPKK2 | mitogen-activated protein kinase kinase 3 | 17q11.2 | CV:PGCnp | G2Cdb.humanNRC G2Cdb.humanPSP Potential synaptic genes |
| 5469 | MED1 | CRSP1 | CRSP200 | DRIP205 | DRIP230 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2 | mediator complex subunit 1 | 17q12 | CV:PGCnp | |
| 31 | ACACA | ACAC | ACACAD | ACC | ACC1 | ACCA | acetyl-CoA carboxylase alpha | 17q21 | CNV:YES CV:PGCnp DMG:Jaffe_2016 Network |
G2Cdb.humanPSD G2Cdb.humanPSP |
| 7283 | TUBG1 | CDCBM4 | GCP-1 | TUBG | TUBGCP1 | tubulin gamma 1 | 17q21 | CV:PGCnp Network |
|
| 3838 | KPNA2 | IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alpha | karyopherin subunit alpha 2 | 17q24.2 | CV:PGCnp DMG:Nishioka_2013 Network |
|
| 5932 | RBBP8 | COM1 | CTIP | JWDS | RIM | SAE2 | SCKL2 | retinoblastoma binding protein 8 | 18q11.2 | CV:PGCnp DMG:Jaffe_2016 |
|
| 6597 | SMARCA4 | BAF190 | BAF190A | BRG1 | MRD16 | RTPS2 | SNF2 | SNF2L4 | SNF2LB | SWI2 | hSNF2b | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 19p13.2 | CV:PGCnp DMG:Nishioka_2013 DMG:vanEijk_2014 GO_Annotation Network PMID:cooccur |
CompositeSet Darnell FMRP targets Ascano FMRP targets Chromatin Remodeling Genes |
| 3726 | JUNB | AP-1 | jun B proto-oncogene | 19p13.2 | CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
|
| 10362 | HMG20B | BRAF25 | BRAF35 | HMGX2 | HMGXB2 | PP7706 | SMARCE1r | SOXL | pp8857 | high mobility group 20B | 19p13.3 | DMG:Jaffe_2016 | Chromatin Remodeling Genes |
| 898 | CCNE1 | CCNE | pCCNE1 | cyclin E1 | 19q12 | CV:PGCnp DMG:Montano_2016 Network |
|
| 8543 | LMO4 | - | LIM domain only 4 | 1p22.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 PMID:cooccur |
|
| 3716 | JAK1 | JAK1A | JAK1B | JTK3 | Janus kinase 1 | 1p32.3-p31.3 | CV:PGCnp DMG:Jaffe_2016 GSMA_IIA Network |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 3065 | HDAC1 | GON-10 | HD1 | RPD3 | RPD3L1 | histone deacetylase 1 | 1p34 | CV:PGCnp PMID:cooccur |
Ascano FMRP targets Chromatin Remodeling Genes |
| 63967 | CLSPN | - | claspin | 1p34.2 | CV:PGCnp DNM:Fromer_2014 |
CompositeSet Ascano FMRP targets |
| 6118 | RPA2 | REPA2 | RP-A p32 | RP-A p34 | RPA32 | replication protein A2 | 1p35 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 |
|
| 571 | BACH1 | BACH-1 | BTBD24 | BTB and CNC homology 1, basic leucine zipper transcription factor 1 | 21q22.11 | CV:PGCnp DMG:Jaffe_2016 |
|
| 11200 | CHEK2 | CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1 | checkpoint kinase 2 | 22q12.1 | CV:PGCnp DMG:Jaffe_2016 DNM:Gulsuner_2013 GSMA_I |
|
| 2033 | EP300 | KAT3B | RSTS2 | p300 | E1A binding protein p300 | 22q13.2 | CV:PGCnp DNM:Fromer_2014 GO_Annotation Network |
CompositeSet Darnell FMRP targets Ascano FMRP targets Chromatin Remodeling Genes |
| 2956 | MSH6 | GTBP | GTMBP | HNPCC5 | HSAP | p160 | mutS homolog 6 | 2p16 | CV:PGCnp DMG:Nishioka_2013 Network |
|
| 9111 | NMI | - | N-myc and STAT interactor | 2q23 | CV:PGCnp GSMA_IIA PMID:cooccur |
|
| 6772 | STAT1 | CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91 | signal transducer and activator of transcription 1 | 2q32.2 | CV:PGCnp Network PMID:cooccur |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.humanPSD G2Cdb.humanPSP |
| 580 | BARD1 | - | BRCA1 associated RING domain 1 | 2q35 | CV:PGCnp GSMA_IIA GSMA_IIE Network PMID:cooccur |
|
| 993 | CDC25A | CDC25A2 | cell division cycle 25A | 3p21 | CV:PGCnp | Ascano FMRP targets |
| 8314 | BAP1 | HUCEP-13 | UCHL2 | hucep-6 | BRCA1相关蛋白1 | 3p21.1 | LK:YES | CompositeSet Darnell FMRP targets Chromatin Remodeling Genes |
| 4292 | MLH1 | COCA2 | FCC2 | HNPCC | HNPCC2 | hMLH1 | mutL homolog 1 | 3p21.3 | CV:PGCnp GSMA_I |
|
| 8850 | KAT2B | CAF | P/CAF | PCAF | lysine acetyltransferase 2B | 3p24 | CV:GWAScat CV:GWASdb CV:PGCnp |
Chromatin Remodeling Genes |
| 545 | ATR | FCTCS | FRP1 | MEC1 | SCKL | SCKL1 | ATR serine/threonine kinase | 3q23 | CV:PGCnp PMID:cooccur |
Ascano FMRP targets |
| 1487 | CTBP1 | BARS | C-terminal binding protein 1 | 4p16 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 PMID:cooccur |
PROTEIN CLUSTERING CompositeSet Darnell FMRP targets |
| 995 | CDC25C | CDC25 | PPP1R60 | cell division cycle 25C | 5q31 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GSMA_I |
|
| 4869 | NPM1 | B23 | NPM | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | 5q35.1 | CV:PGCnp GSMA_IIA Network |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL |
| 4172 | MCM3 | HCC5 | P1-MCM3 | P1.h | RLFB | minichromosome maintenance complex component 3 | 6p12 | CV:PGCnp DMG:Montano_2016 DMG:Nishioka_2013 GSMA_IIE Network |
Ascano FMRP targets |
| 9656 | MDC1 | NFBD1 | mediator of DNA damage checkpoint 1 | 6p21.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GSMA_I |
|
| 3066 | HDAC2 | HD2 | RPD3 | YAF1 | histone deacetylase 2 | 6q21 | DMG:Wockner_2014 Network PMID:cooccur |
Chromatin Remodeling Genes |
| 2099 | ESR1 | ER | ESR | ESRA | ESTRR | Era | NR3A1 | estrogen receptor 1 | 6q25.1 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 Expression Network PMID:cooccur |
|
| 5982 | RFC2 | RFC40 | replication factor C subunit 2 | 7q11.23 | CNV:YES CV:PGCnp DMG:Jaffe_2016 |
|
| 7979 | SHFM1 | DSS1 | ECD | SEM1 | SHFD1 | SHSF1 | Shfdg1 | split hand/foot malformation (ectrodactyly) type 1 | 7q21.3 | CV:PGCnp PMID:cooccur |
|
| 5591 | PRKDC | DNA-PKcs | DNAPK | DNPK1 | HYRC | HYRC1 | IMD26 | XRCC7 | p350 | protein kinase, DNA-activated, catalytic polypeptide | 8q11 | CV:PGCnp DMG:vanEijk_2014 DNM:McCarthy_2014 GO_Annotation Network |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS |
| 4683 | NBN | AT-V1 | AT-V2 | ATV | NBS | NBS1 | P95 | nibrin | 8q21 | CV:PGCnp | |
| 4609 | MYC | MRTL | MYCC | bHLHe39 | c-Myc | v-myc avian myelocytomatosis viral oncogene homolog | 8q24.21 | CV:PGCnp DMG:Jaffe_2016 Expression Network PMID:cooccur |
|
| 2189 | FANCG | FAG | XRCC9 | Fanconi anemia complementation group G | 9p13 | CV:PGCnp DMG:Jaffe_2016 |
|
| 3717 | JAK2 | JTK10 | THCYT3 | Janus kinase 2 | 9p24 | CV:PGCnp GO_Annotation Network PMID:cooccur |
|
| 25 | ABL1 | ABL | JTK7 | bcr/abl | c-ABL | c-ABL1 | p150 | v-abl | ABL proto-oncogene 1, non-receptor tyrosine kinase | 9q34.1 | CV:PGCnp Network |
Ascano FMRP targets |
| 2002 | ELK1 | - | ELK1, ETS transcription factor | Xp11.2 | DEG:Sanders_2013 Expression PMID:cooccur |
|
| 8243 | SMC1A | CDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCB | structural maintenance of chromosomes 1A | Xp11.22-p11.21 | CV:PGCnp PMID:cooccur |
|
| 5931 | RBBP7 | RbAp46 | retinoblastoma binding protein 7 | Xp22.2 | CV:PGCnp | Chromatin Remodeling Genes |
| 367 | AR | AIS | AR8 | DHTR | HUMARA | HYSP1 | KD | NR3C4 | SBMA | SMAX1 | TFM | androgen receptor | Xq12 | Association CV:PGCnp GO_Annotation GR_Ng Network PMID:cooccur |
|