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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group? | Functional group? |
|---|---|---|---|---|---|---|
| 983 | CDK1 | CDC2 | CDC28A | P34CDC2 | cyclin-dependent kinase 1 | 10q21.1 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 GO_Annotation Network |
|
| 9126 | SMC3 | BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1 | structural maintenance of chromosomes 3 | 10q25 | CV:PGCnp Network PMID:cooccur |
G2Cdb.humanPSD G2Cdb.humanPSP |
| 9184 | BUB3 | BUB3L | hBUB3 | BUB3 mitotic checkpoint protein | 10q26 | CV:GWAScat CV:PGCnp GSMA_IIA |
|
| 6240 | RRM1 | R1 | RIR1 | RR1 | ribonucleotide reductase catalytic subunit M1 | 11p15.5 | CV:PGCnp PMID:cooccur |
G2Cdb.humanPSD G2Cdb.humanPSP |
| 472 | ATM | AT1 | ATA | ATC | ATD | ATDC | ATE | TEL1 | TELO1 | ATM serine/threonine kinase | 11q22-q23 | CV:PGCnp GO_Annotation GSMA_I Network PMID:cooccur |
INTRACELLULAR SIGNAL TRANSDUCTION Ascano FMRP targets |
| 5965 | RECQL | RECQL1 | RecQ1 | RecQ like helicase | 12p12 | DMG:Jaffe_2016 | |
| 9700 | ESPL1 | ESP1 | SEPA | extra spindle pole bodies like 1, separase | 12q | CV:PGCnp GO_Annotation |
Ascano FMRP targets |
| 8914 | TIMELESS | TIM | TIM1 | hTIM | timeless circadian clock | 12q13.3 | Association CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
Ascano FMRP targets |
| 7374 | UNG | DGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2 | uracil DNA glycosylase | 12q23-q24.1 | CV:PGCnp | |
| 4801 | NFYB | CBF-A | CBF-B | HAP3 | NF-YB | nuclear transcription factor Y subunit beta | 12q23.3 | CV:PGCnp DMG:Jaffe_2016 |
|
| 5501 | PPP1CC | PP-1G | PP1C | PPP1G | protein phosphatase 1 catalytic subunit gamma | 12q24.1-q24.2 | CV:PGCnp | G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.humanNRC G2Cdb.humanPSD G2Cdb.humanPSP Chromatin Remodeling Genes Potential synaptic genes |
| 5426 | POLE | CRCS12 | FILS | POLE1 | polymerase (DNA) epsilon, catalytic subunit | 12q24.3 | CV:PGCnp PMID:cooccur |
Ascano FMRP targets |
| 675 | BRCA2 | BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11 | breast cancer 2 | 13q12.3 | CV:PGCnp GO_Annotation Network PMID:cooccur |
|
| 6541 | SLC7A1 | ATRC1 | CAT-1 | ERR | HCAT1 | REC1L | solute carrier family 7 member 1 | 13q12.3 | CV:PGCnp DMG:Wockner_2014 Expression |
|
| 5983 | RFC3 | RFC38 | replication factor C subunit 3 | 13q13.2 | CV:PGCnp DMG:Jaffe_2016 |
|
| 5925 | RB1 | OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110 | retinoblastoma 1 | 13q14.2 | CV:PGCnp Network PMID:cooccur |
|
| 7027 | TFDP1 | DILC | DP1 | DRTF1 | Dp-1 | transcription factor Dp-1 | 13q34 | CV:PGCnp DMG:Wockner_2014 |
|
| 1854 | DUT | dUTPase | deoxyuridine triphosphatase | 15q21.1 | CV:GWASdb DMG:vanEijk_2014 PMID:cooccur |
|
| 641 | BLM | BS | RECQ2 | RECQL2 | RECQL3 | Bloom syndrome RecQ like helicase | 15q26.1 | CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
Ascano FMRP targets |
| 55215 | FANCI | KIAA1794 | Fanconi anemia complementation group I | 15q26.1 | CV:PGCnp | Ascano FMRP targets |
| 6627 | SNRPA1 | Lea1 | 小核核糖核蛋白多肽' | 15q26.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 8883 | NAE1 | A-116A10.1 | APPBP1 | HPP1 | ula-1 | NEDD8 activating enzyme E1 subunit 1 | 16q22 | CV:PGCnp | |
| 6117 | RPA1 | HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70 | replication protein A1 | 17p13.3 | CV:PGCnp DMG:Wockner_2014 |
Ascano FMRP targets |
| 6776 | STAT5A | MGF | STAT5 | signal transducer and activator of transcription 5A | 17q11.2 | CV:PGCnp DMG:Wockner_2014 Network |
|
| 23512 | SUZ12 | CHET9 | JJAZ1 | SUZ12 polycomb repressive complex 2 subunit | 17q11.2 | CV:PGCnp DMG:Nishioka_2013 |
Chromatin Remodeling Genes |
| 26574 | AATF | BFR2 | CHE-1 | CHE1 | DED | apoptosis antagonizing transcription factor | 17q12 | CNV:YES CV:PGCnp DMG:Jaffe_2016 |
|
| 9326 | ZNHIT3 | TRIP3 | zinc finger HIT-type containing 3 | 17q12 | CNV:YES CV:PGCnp DMG:Jaffe_2016 |
|
| 672 | BRCA1 | BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53 | breast cancer 1 | 17q21 | CV:PGCnp DMG:Wockner_2014 Network PMID:cooccur |
|
| 7153 | TOP2A | TOP2 | TP2A | topoisomerase (DNA) II alpha | 17q21.2 | CV:PGCnp Network PMID:cooccur |
Ascano FMRP targets |
| 5889 | RAD51C | BROVCA3 | FANCO | R51H3 | RAD51L2 | RAD51 paralog C | 17q22 | CV:PGCnp DMG:Wockner_2014 |
|
| 5932 | RBBP8 | COM1 | CTIP | JWDS | RIM | SAE2 | SCKL2 | retinoblastoma binding protein 8 | 18q11.2 | CV:PGCnp DMG:Jaffe_2016 |
|
| 10212 | DDX39A | BAT1 | BAT1L | DDX39 | DDXL | URH49 | DEAD-box helicase 39A | 19p13.12 | CV:PGCnp DNM:Gulsuner_2013 |
|
| 1786 | DNMT1 | ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaI | DNA (cytosine-5-)-methyltransferase 1 | 19p13.2 | CV:PGCnp DMG:Wockner_2014 DNM:Gulsuner_2013 PMID:cooccur |
Ascano FMRP targets Chromatin Remodeling Genes |
| 10036 | CHAF1A | CAF-1 | CAF1 | CAF1B | CAF1P150 | P150 | chromatin assembly factor 1 subunit A | 19p13.3 | CV:PGCnp DMG:Wockner_2014 Network |
|
| 6929 | TCF3 | E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21 | transcription factor 3 | 19p13.3 | CV:PGCnp DMG:Montano_2016 DMG:vanEijk_2014 |
|
| 6626 | SNRPA | Mud1 | U1-A | U1A | 小核核糖核蛋白多肽 | 19q13.1 | CV:PGCnp DMG:Jaffe_2016 |
|
| 4849 | CNOT3 | LENG2 | NOT3 | NOT3H | CCR4-NOT transcription complex subunit 3 | 19q13.4 | CV:PGCnp | |
| 991 | CDC20 | CDC20A | bA276H19.3 | p55CDC | cell division cycle 20 | 1p34.1 | CV:PGCnp Network PMID:cooccur |
|
| 6628 | SNRPB | CCMS | COD | SNRPB1 | Sm-B/B' | SmB/B' | SmB/SmB' | snRNP-B | small nuclear ribonucleoprotein polypeptides B and B1 | 20p13 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 |
|
| 3420 | IDH3B | H-IDHB | RP46 | isocitrate dehydrogenase 3 (NAD+) beta | 20p13 | CV:PGCnp Expression |
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.human_mitochondria G2Cdb.humanPSD G2Cdb.humanPSP |
| 5111 | PCNA | ATLD2 | proliferating cell nuclear antigen | 20pter-p12 | Network PMID:cooccur |
|
| 7150 | TOP1 | TOPI | topoisomerase (DNA) I | 20q12-q13.1 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 |
Ascano FMRP targets |
| 11065 | UBE2C | UBCH10 | dJ447F3.2 | ubiquitin conjugating enzyme E2 C | 20q13.12 | CV:PGCnp DMG:Wockner_2014 |
|
| 11200 | CHEK2 | CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1 | checkpoint kinase 2 | 22q12.1 | CV:PGCnp DMG:Jaffe_2016 DNM:Gulsuner_2013 GSMA_I |
|
| 22934 | RPIA | RPI | RPIAD | ribose 5-phosphate isomerase A | 2p11.2 | CV:PGCnp DMG:Jaffe_2016 GSMA_I |
|
| 7514 | XPO1 | CRM1 | emb | exp1 | exportin 1 | 2p15 | CV:PGCnp DMG:Jaffe_2016 |
|
| 790 | CAD | CDG1Z | carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase | 2p22-p21 | CV:PGCnp GO_Annotation Network PMID:cooccur |
Ascano FMRP targets |
| 4175 | MCM6 | MCG40308 | Mis5 | P105MCM | minichromosome maintenance complex component 6 | 2q21 | CV:PGCnp DMG:Nishioka_2013 GSMA_I GSMA_IIA |
Ascano FMRP targets |
| 4690 | NCK1 | NCK | NCKalpha | nck-1 | NCK adaptor protein 1 | 3q21 | CV:PGCnp GO_Annotation Network |
|
| 11073 | TOPBP1 | TOP2BP1 | topoisomerase (DNA) II binding protein 1 | 3q22.1 | CV:PGCnp CV:PheWAS |
|
| 10606 | PAICS | ADE2 | ADE2H1 | AIRC | PAIS | phosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase | 4q12 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 Network PMID:cooccur |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet |
| 22872 | SEC31A | ABP125 | ABP130 | HSPC275 | HSPC334 | SEC31L1 | SEC31 homolog A, COPII coat complex component | 4q21.22 | CV:PGCnp DMG:Jaffe_2016 DNM:Fromer_2014 DNM:McCarthy_2014 |
CompositeSet |
| 23173 | METAP1 | MAP1A | MetAP1A | methionyl aminopeptidase 1 | 4q23 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 |
|
| 4085 | MAD2L1 | HSMAD2 | MAD2 | MAD2 mitotic arrest deficient-like 1 (yeast) | 4q27 | CV:PGCnp DMG:Jaffe_2016 |
|
| 3148 | HMGB2 | HMG2 | high mobility group box 2 | 4q31 | CV:PGCnp DMG:Nishioka_2013 DMG:vanEijk_2014 PMID:cooccur |
|
| 6502 | SKP2 | FBL1 | FBXL1 | FLB1 | p45 | S-phase kinase-associated protein 2, E3 ubiquitin protein ligase | 5p13 | CV:PGCnp | |
| 6902 | TBCA | - | tubulin folding cofactor A | 5q14.1 | CV:PGCnp DMG:Jaffe_2016 |
|
| 4001 | LMNB1 | ADLD | LMN | LMN2 | LMNB | lamin B1 | 5q23.2 | CV:PGCnp DMG:Nishioka_2013 DMG:Wockner_2014 GSMA_I Network |
G2Cdb.humanNRC |
| 10915 | TCERG1 | CA150 | TAF2S | Urn1 | transcription elongation regulator 1 | 5q31 | CV:GWASdb CV:PGCnp DEG:Zhao_2015 GSMA_I GSMA_IIA GSMA_IIE |
|
| 3161 | HMMR | CD168 | IHABP | RHAMM | hyaluronan mediated motility receptor | 5q34 | CV:PGCnp DMG:vanEijk_2014 GSMA_IIA GSMA_IIE |
|
| 3833 | KIFC1 | HSET | KNSL2 | kinesin family member C1 | 6p21.3 | CV:PGCnp DMG:Wockner_2014 GSMA_I |
Ascano FMRP targets |
| 6882 | TAF11 | MGC:15243 | PRO2134 | TAF2I | TAFII28 | TATA-box binding protein associated factor 11 | 6p21.31 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GSMA_I GSMA_IIE |
|
| 7913 | DEK | D6S231E | DEK proto-oncogene | 6p22.3 | CV:PGCnp DMG:Wockner_2014 GSMA_I PMID:cooccur |
|
| 25842 | ASF1A | CGI-98 | CIA | HSPC146 | anti-silencing function 1A histone chaperone | 6q22.31 | CV:PGCnp | Chromatin Remodeling Genes |
| 94239 | H2AFV | H2A.Z-2 | H2AV | H2A histone family member V | 7p13 | CV:PGCnp DNM:Xu_2012 |
CompositeSet |
| 2146 | EZH2 | ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2 | enhancer of zeste 2 polycomb repressive complex 2 subunit | 7q35-q36 | CV:PGCnp DMG:Wockner_2014 Network |
Chromatin Remodeling Genes |
| 5591 | PRKDC | DNA-PKcs | DNAPK | DNPK1 | HYRC | HYRC1 | IMD26 | XRCC7 | p350 | protein kinase, DNA-activated, catalytic polypeptide | 8q11 | CV:PGCnp DMG:vanEijk_2014 DNM:McCarthy_2014 GO_Annotation Network |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS |
| 5885 | RAD21 | CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21 | RAD21 cohesin complex component | 8q24 | CV:PGCnp | |
| 8667 | EIF3H | EIF3S3 | eIF3-gamma | eIF3-p40 | eukaryotic translation initiation factor 3 subunit H | 8q24.11 | CV:PGCnp Network |
|
| 11168 | PSIP1 | DFS70 | LEDGF | PAIP | PSIP2 | p52 | p75 | PC4 and SFRS1 interacting protein 1 | 9p22.3 | CV:PGCnp | |
| 9128 | PRPF4 | HPRP4 | HPRP4P | PRP4 | Prp4p | RP70 | SNRNP60 | pre-mRNA processing factor 4 | 9q31-q33 | CV:PGCnp Network |
Ascano FMRP targets |
| 8243 | SMC1A | CDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCB | structural maintenance of chromosomes 1A | Xp11.22-p11.21 | CV:PGCnp PMID:cooccur |
|