Search results: The pahtwayp2982has 56 genes in the original annotation. Currently, there are 36 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
80201 HKDC1 - hexokinase domain containing 1 10q22.1 CV:PGCnp
DMG:Wockner_2014
79026 AHNAK AHNAKRS AHNAK nucleoprotein 11q12.2 CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
4312 MMP1 CLG | CLGN matrix metallopeptidase 1 11q22.3 PMID:cooccur
7070 THY1 CD90 | CDw90 Thy-1 cell surface antigen 11q23.3 DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
23187 PHLDB1 LL5A pleckstrin homology like domain family B member 1 11q23.3 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
3678 ITGA5 CD49e | FNRA | VLA-5 | VLA5A integrin subunit alpha 5 12q13.13 DMG:vanEijk_2014
GO_Annotation
Network
Ascano FMRP targets
4240 MFGE8 BA46 | EDIL1 | HMFG | HsT19888 | MFG-E8 | MFGM | OAcGD3S | SED1 | SPAG10 | hP47 milk fat globule-EGF factor 8 protein 15q25 CV:PGCnp
1512 CTSH ACC-4 | ACC-5 | ACC4 | ACC5 | CPSB cathepsin H 15q25.1 CV:PGCnp
11057 ABHD2 HS1-2 | LABH2 | PHPS1-2 abhydrolase domain containing 2 15q26.1 CV:PGCnp
Expression
4496 MT1H MT-0 | MT-1H | MT-IH | MT1 metallothionein 1H 16q13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6347 CCL2 GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CF C-C motif chemokine ligand 2 17q11.2-q12 CV:PGCnp
Expression
PMID:cooccur
3487 IGFBP4 BP-4 | HT29-IGFBP | IBP4 | IGFBP-4 insulin like growth factor binding protein 4 17q21.2 CV:PGCnp
PMID:cooccur
3866 KRT15 CK15 | K15 | K1CO keratin 15 17q21.2 CV:PGCnp
DNM:Fromer_2014
CompositeSet
3675 ITGA3 CD49C | FRP-2 | GAP-B3 | GAPB3 | ILNEB | MSK18 | VCA-2 | VL3A | VLA3a integrin subunit alpha 3 17q21.33 CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
6597 SMARCA4 BAF190 | BAF190A | BRG1 | MRD16 | RTPS2 | SNF2 | SNF2L4 | SNF2LB | SWI2 | hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 19p13.2 CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
81 ACTN4 ACTININ-4 | FSGS | FSGS1 actinin alpha 4 19q13 CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
100124696 TEC - transient erythroblastopenia of childhood 19q13.2 CV:PGCnp
PMID:cooccur
1647 GADD45A DDIT1 | GADD45 growth arrest and DNA damage inducible alpha 1p31.2 CV:GWASdb
CV:PGCnp
GSMA_IIA
2048 EPHB2 CAPB | DRT | EK5 | EPHT3 | ERK | Hek5 | PCBC | Tyro5 EPH receptor B2 1p36.1-p35 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Potential synaptic genes
6273 S100A2 CAN19 | S100L S100 calcium binding protein A2 1q21 DMG:Montano_2016
GSMA_I
GSMA_IIA
4000 LMNA CDCD1 | CDDC | CMD1A | CMT2B1 | EMD2 | FPL | FPLD | FPLD2 | HGPS | IDC | LDP1 | LFP | LGMD1B | LMN1 | LMNC | LMNL1 | PRO1 lamin A/C 1q22 CV:PGCnp
Expression
GSMA_I
GSMA_IIA
Network
PMID:cooccur
5778 PTPN7 BPTP-4 | HEPTP | LC-PTP | LPTP | PTPNI protein tyrosine phosphatase, non-receptor type 7 1q32.1 CV:PGCnp
PMID:cooccur
493 ATP2B4 ATP2B2 | MXRA1 | PMCA4 | PMCA4b | PMCA4x ATPase plasma membrane Ca2+ transporting 4 1q32.1 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Awadalla_2010
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
183 AGT ANHU | SERPINA8 angiotensinogen 1q42.2 CV:PGCnp
GO_Annotation
PMID:cooccur
23654 PLXNB2 MM1 | Nbla00445 | PLEXB2 | dJ402G11.3 plexin B2 22q13.33 CV:PGCnp
GO_Annotation
Ascano FMRP targets
2355 FOSL2 FRA2 FOS like antigen 2 2p23.3 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5270 SERPINE2 GDN | GDNPF | PI-7 | PI7 | PN-1 | PN1 | PNI serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 2q36.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
G2Cdb.humanPSP
2317 FLNB ABP-278 | ABP-280 | AOI | FH1 | FLN-B | FLN1L | LRS1 | SCT | TABP | TAP filamin B 3p14.3 Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
131566 DCBLD2 CLCP1 | ESDN discoidin, CUB and LCCL domain containing 2 3q12.1|3 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
7006 TEC PSCTK4 tec protein tyrosine kinase 4p12 CV:PGCnp
PMID:cooccur
4131 MAP1B FUTSCH | MAP5 | PPP1R102 microtubule associated protein 1B 5q13 CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
1026 CDKN1A CAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1 cyclin-dependent kinase inhibitor 1A 6p21.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
7328 UBE2H E2-20K | GID3 | UBC8 | UBCH | UBCH2 ubiquitin conjugating enzyme E2 H 7q32 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
1508 CTSB APPS | CPSB cathepsin B 8p22 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
54704 PDP1 PDH | PDP | PDPC | PPM2A | PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 8q22.1 CV:PGCnp
DMG:Wockner_2014
6595 SMARCA2 BAF190 | BRM | NCBRS | SNF2 | SNF2L2 | SNF2LA | SWI2 | Sth1p | hBRM | hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9p22.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes


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