Search results: The pahtwayp3225has 120 genes in the original annotation. Currently, there are 69 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
2572 GAD2 GAD65 glutamate decarboxylase 2 10p11.23 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
10660 LBX1 HPX-6 | HPX6 | LBX1H | homeobox ladybird homeobox 1 10q24 CV:PGCnp
GO_Annotation
10935 PRDX3 AOP-1 | AOP1 | HBC189 | MER5 | PRO1748 | SP-22 | prx-III peroxiredoxin 3 10q25-q26 CV:PGCnp
4722 NDUFS3 CI-30 NADH:ubiquinone oxidoreductase core subunit S3 11p11.11 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5286 PIK3C2A CPK | PI3-K-C2(ALPHA) | PI3-K-C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha 11 p15.5-p14 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
5837 PYGM - phosphorylase, glycogen, muscle 11q12-q13.2 DMG:Wockner_2014
PMID:cooccur
9099 USP2 UBP41 | USP9 ubiquitin specific peptidase 2 11q23.3 CV:PGCnp
GSMA_I
PMID:cooccur
775 CACNA1C CACH2 | CACN2 | CACNL1A1 | CCHL1A1 | CaV1.2 | LQT8 | TS calcium voltage-gated channel subunit alpha1 C 12p13.3 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
EXCITABILITY
SEROTONIN
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5367 PMCH MCH | ppMCH pro-melaninconcentrating hormone 12q23.2 GO_Annotation
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
4939 OAS2 - 2'-5'-oligoadenylate synthetase 2 12q24.2 CV:GWASdb
CV:PGCnp
50614 GALNT9 GALNAC-T9 | GALNACT9 polypeptide N-acetylgalactosaminyltransferase 9 12q24.33 CV:PGCnp
DMG:Wockner_2014
3651 PDX1 GSF | IDX-1 | IPF1 | IUF1 | MODY4 | PAGEN1 | PDX-1 | STF-1 pancreatic and duodenal homeobox 1 13q12.1 CV:PGCnp
PMID:cooccur
26512 INTS6 DBI-1 | DDX26 | DDX26A | DICE1 | HDB | INT6 | Notchl2 integrator complex subunit 6 13q14.3 CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
10253 SPRY2 IGAN3 | hSPRY2 sprouty RTK signaling antagonist 2 13q31.1 CV:PGCnp
PMID:cooccur
160897 GPR180 ITR G protein-coupled受体180 13q32.1 CV:PGCnp
DMG:Jaffe_2016
6656 SOX1 - SRY-box 1 13q34 CV:PGCnp
GO_Annotation
PMID:cooccur
7337 UBE3A ANCR | AS | E6-AP | EPVE6AP | HPVE6A ubiquitin protein ligase E3A 15q11.2 CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
84888 SPPL2A IMP3 | PSL2 signal peptide peptidase like 2A 15q21.2 CV:PGCnp
PMID:cooccur
54629 FAM63B - family with sequence similarity 63 member B 15q21.3 CV:PGCnp
PMID:cooccur
2072 ERCC4 ERCC11 | FANCQ | RAD1 | XFEPS | XPF excision repair cross-complementation group 4 16p13.12 CV:PGCnp
GSMA_IIE
7567 ZNF19 KOX12 zinc finger protein 19 16q22 CV:PGCnp
8824 CES2 CE-2 | CES2A1 | PCE-2 | iCE carboxylesterase 2 16q22.1 CV:PGCnp
10951 CBX1 CBX | HP1-BETA | HP1Hs-beta | HP1Hsbeta | M31 | MOD1 | p25beta chromobox 1 17q21.32 CV:PGCnp
3690 ITGB3 BDPLT16 | BDPLT2 | CD61 | GP3A | GPIIIa | GT integrin subunit beta 3 17q21.32 CV:PGCnp
Network
PMID:cooccur
1528 CYB5A CYB5 | MCB5 cytochrome b5 type A (microsomal) 18q23 CV:PGCnp
DMG:Jaffe_2016
90317 ZNF616 - zinc finger protein 616 19q13.41 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
1996 ELAVL4 HUD | PNEM ELAV like neuron-specific RNA binding protein 4 1p34 CV:PGCnp
PMID:cooccur
765 CA6 CA-VI | GUSTIN carbonic anhydrase VI 1p36.2 CV:PGCnp
8514 KCNAB2 AKR6A5 | HKvbeta2 | HKvbeta2.1 | HKvbeta2.2 | KCNA2B | KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 1p36.3 CV:PGCnp
DMG:Wockner_2014
EXCITABILITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
2104 ESRRG ERR3 | ERRgamma | NR3B3 estrogen related receptor gamma 1q41 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
10806 SDCCAG8 BBS16 | CCCAP | CCCAP SLSN7 | HSPC085 | NPHP10 | NY-CO-8 | SLSN7 | hCCCAP serologically defined colon cancer antigen 8 1q43 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Wockner_2014
LK:YES
PMID:cooccur
5988 RFPL1 RNF78 ret finger protein like 1 22q12.2 CV:GWASdb
CV:PGCnp
GSMA_I
9781 RNF144A RNF144 | UBCE7IP4 ring finger protein 144A 2p25.2 CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
2637 GBX2 - gastrulation brain homeobox 2 2q37.2 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
1841 DTYMK CDC8 | PP3731 | TMPK | TYMK deoxythymidylate kinase 2q37.3 CV:PGCnp
DMG:Jaffe_2016
4286 MITF CMM8 | MI | WS2 | WS2A | bHLHe32 microphthalmia-associated transcription factor 3p13 CV:PGCnp
PMID:cooccur
9497 SLC4A7 NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6 solute carrier family 4 member 7 3p22 CV:PGCnp
GO_Annotation
GSMA_I
5210 PFKFB4 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 3p22-p21 DEG:Zhao_2015
141 ADPRH ARH1 ADP-ribosylarginine hydrolase 3q13.31-q13.33 CV:PGCnp
1360 CPB1 CPB | PASP | PCPB carboxypeptidase B1 3q24 CV:PGCnp
116931 MED12L NOPAR | TNRC11L | TRALP | TRALPUSH mediator complex subunit 12 like 3q25.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8929 PHOX2B NBLST2 | NBPhox | PMX2B paired like homeobox 2b 4p12 Association
CV:PGCnp
GO_Annotation
PMID:cooccur
7466 WFS1 CTRCT41 | WFRS | WFS | WFSL wolframin ER transmembrane glycoprotein 4p16.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
5470 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 4q21.1 CV:PGCnp
PMID:cooccur
10855 HPSE HPA | HPA1 | HPR1 | HPSE1 | HSE1 heparanase 4q21.3 CV:PGCnp
DMG:Jaffe_2016
3148 HMGB2 HMG2 high mobility group box 2 4q31 CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
8470 SORBS2 ARGBP2 | PRO0618 sorbin and SH3 domain containing 2 4q35.1 CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5924 RASGRF2 GRF2 | RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 5q13 CV:GWAScat
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
202052 DNAJC18 - DnaJ heat shock protein family (Hsp40) member C18 5q31.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
29113 C6orf15 STG chromosome 6 open reading frame 15 6p21.3 CV:GWASdb
CV:PGCnp
GSMA_I
85236 HIST1H2BK H2B/S | H2BFAiii | H2BFT | H2BK histone cluster 1, H2bk 6p21.33 CV:PGCnp
GSMA_I
55937 APOM G3a | HSPC336 | NG20 | apo-M apolipoprotein M 6p21.33 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
83699 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 6q14.1 CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
9892 SNAP91 AP180 | CALM synaptosome associated protein 91kDa 6q14.2 CV:PGC128
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
6446 SGK1 SGK serum/glucocorticoid regulated kinase 1 6q23 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
50508 NOX3 GP91-3 | MOX-2 NADPH oxidase 3 6q25.3 CV:GWASdb
CV:PGCnp
6950 TCP1 CCT-alpha | CCT1 | CCTa | D6S230E | TCP-1-alpha t-complex 1 6q25.3-q26 Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5340 PLG - plasminogen 6q26 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
6671 SP4 HF1B | SPR-1 Sp4 transcription factor 7p15.3 CV:GWASdb
CV:PGCnp
PMID:cooccur
27342 RABGEF1 RABEX5 | RAP1 | rabex-5 RAB guanine nucleotide exchange factor (GEF) 1 7q11.21 CV:PGCnp
DMG:Jaffe_2016
INTRACELLULAR TRAFFICKING
10926 DBF4 ASK | CHIF | DBF4A | ZDBF1 DBF4 zinc finger 7q21.3 CV:PGCnp
Network
1278 COL1A2 OI4 collagen type I alpha 2 7q22.1 CV:GWASdb
CV:PGCnp
5506 PPP1R3A GM | PP1G | PPP1R3 protein phosphatase 1 regulatory subunit 3A 7q31.1 CV:PGCnp
22797 TFEC TCFEC | TFE-C | TFEC-L | TFECL | bHLHe34 | hTFEC-L transcription factor EC 7q31.2 CV:PGCnp
6591 SNAI2 SLUG | SLUGH1 | SNAIL2 | WS2D snail family zinc finger 2 8q11 CV:PGCnp
PMID:cooccur
152006 RNF38 - ring finger protein 38 9p13 CV:GWASdb
CV:PGCnp
81689 ISCA1 HBLD2 | ISA1 | hIscA iron-sulfur cluster assembly 1 9 q21.33 CV:PGCnp
29988 SLC2A8 GLUT8 | GLUTX1 solute carrier family 2 member 8 9q33.3 CV:PGCnp
DMG:Nishioka_2013
6594 SMARCA1 ISWI | NURF140 | SNF2L | SNF2L1 | SNF2LB | SNF2LT | SWI | SWI2 | hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 Xq25 CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes


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