Search results: The pahtwayp3243has 68 genes in the original annotation. Currently, there are 44 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
3688 ITGB1 CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLAB integrin subunit beta 1 10p11.2 CV:GWASdb
CV:PGCnp
GO_Annotation
Network
6251 RSU1 RSP-1 Ras suppressor protein 1 10p13 CV:PGCnp
DMG:Wockner_2014
132 ADK AK adenosine kinase 10q22|10q11-q24 CV:PGCnp
PMID:cooccur
6881 TAF10 TAF2A | TAF2H | TAFII30 TATA-box binding protein associated factor 10 11p15.3 CV:PGCnp
8519 IFITM1 9-27 | CD225 | DSPA2a | IFI17 | LEU13 interferon induced transmembrane protein 1 11p15.5 DMG:Montano_2016
Expression
PMID:cooccur
283120 H19 ASM | ASM1 | BWS | D11S813E | LINC00008 | NCRNA00008 | WT2 H19, imprinted maternally expressed transcript (non-protein coding) 11p15.5 CV:PGCnp
PMID:cooccur
6947 TCN1 HC | TC-1 | TC1 | TCI transcobalamin 1 11q11-q12 CV:PGCnp
DMG:vanEijk_2014
4312 MMP1 CLG | CLGN matrix metallopeptidase 1 11q22.3 PMID:cooccur
10970 CKAP4 CLIMP-63 | ERGIC-63 | p63 cytoskeleton-associated protein 4 12q23.3 CV:PGCnp
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
2098 ESD FGH esterase D 13q14.1-q14.2 Association
CV:PGCnp
PMID:cooccur
1033 CDKN3 CDI1 | CIP2 | KAP | KAP1 cyclin-dependent kinase inhibitor 3 14q22 CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
4522 MTHFD1 MTHFC | MTHFD methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 14q24 Association
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
5479 PPIB CYP-S1 | CYPB | HEL-S-39 | OI9 | SCYLP peptidylprolyl isomerase B 15q21-q22 CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
9768 KIAA0101 L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAF KIAA0101 15q22.31 CV:PGCnp
3418 IDH2 D2HGA2 | ICD-M | IDH | IDHM | IDP | IDPM | mNADP-IDH isocitrate dehydrogenase 2 (NADP+), mitochondrial 15q26.1 CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
4493 MT1E MT-1E | MT-IE | MT1 | MTD metallothionein 1E 16q13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4501 MT1X MT-1l | MT1 metallothionein 1X 16q13 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
16 AARS CMT2N | EIEE29 alanyl-tRNA synthetase 16q22 CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Ascano FMRP targets
6510 SLC1A5 AAAT | ASCT2 | ATBO | M7V1 | M7VS1 | R16 | RDRC solute carrier family 1 member 5 19q13.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
991 CDC20 CDC20A | bA276H19.3 | p55CDC cell division cycle 20 1p34.1 CV:PGCnp
Network
PMID:cooccur
8565 YARS CMTDIC | TYRRS | YRS | YTS tyrosyl-tRNA synthetase 1p35.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
3925 STMN1 C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMN stathmin 1 1p36.11 CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
5226 PGD 6PGD phosphogluconate dehydrogenase 1p36.22 CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
5321 PLA2G4A PLA2G4 | cPLA2 | cPLA2-alpha phospholipase A2 group IVA 1q31.1 Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
11065 UBE2C UBCH10 | dJ447F3.2 泛素接合酶E2 C 20q13.12 CV:PGCnp
DMG:Wockner_2014
873 CBR1 CBR | SDR21C1 | hCBR1 carbonyl reductase 1 21q22.13 DEG:Zhao_2015
Network
CompositeSet
7494 XBP1 TREB-5 | TREB5 | XBP-1 | XBP2 X-box binding protein 1 22q12.1|22q12 Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
3976 LIF CDF | DIA | HILDA | MLPLI leukemia inhibitory factor 22q12.2 CV:PGCnp
GSMA_I
PMID:cooccur
6382 SDC1 CD138 | SDC | SYND1 | syndecan syndecan 1 2p24.1 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
7447 VSNL1 HLP3 | HPCAL3 | HUVISL1 | VILIP | VILIP-1 visinin like 1 2p24.3 CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
4953 ODC1 ODC ornithine decarboxylase 1 2p25 CV:PGCnp
DMG:Nishioka_2013
3655 ITGA6 CD49f | ITGA6B | VLA-6 integrin subunit alpha 6 2 q31.1 CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
5757 PTMA TMSA prothymosin, alpha 2q37.1 CV:PGCnp
DMG:Jaffe_2016
4292 MLH1 COCA2 | FCC2 | HNPCC | HNPCC2 | hMLH1 μtL homolog 1 3p21.3 CV:PGCnp
GSMA_I
5333 PLCD1 NDNC3 | PLC-III phospholipase C delta 1 3p22-p21.3 CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
483 ATP1B3 ATPB-3 | CD298 ATPase Na+/K+ transporting subunit beta 3 3q23 CV:PGCnp
DMG:Wockner_2014
6715 SRD5A1 S5AR 1 steroid 5 alpha-reductase 1 5p15 CV:PGCnp
PMID:cooccur
5066 PAM PAL | PHM peptidylglycine alpha-amidating monooxygenase 5q14-q21 CV:GWASdb
CV:PGCnp
Expression
GR_Ng
PMID:cooccur
3181 HNRNPA2B1 HNRNPA2 | HNRNPB1 | HNRPA2 | HNRPA2B1 | HNRPB1 | IBMPFD2 | RNPA2 | SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 7p15 CV:PGCnp
440 ASNS ASNSD | TS11 asparagine synthetase (glutamine-hydrolyzing) 7q21.3 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
1052 CEBPD C/EBP-delta | CELF | CRP3 | NF-IL6-beta CCAAT/enhancer binding protein delta 8p11.2-p11.1 CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
2053 EPHX2 CEH | SEH epoxide hydrolase 2 8p21 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
2934 GSN ADF | AGEL gelsolin 9q33 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
3309 HSPA5 BIP | GRP78 | HEL-S-89n | MIF2 heat shock protein family A (Hsp70) member 5 9q33.3 CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets


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