Search results: The pahtwayp3372has 85 genes in the original annotation. Currently, there are 47 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
7189 TRAF6 MGC:3310 | RNF85 TNF receptor associated factor 6 11p12 CV:PGCnp
GO_Annotation
Network
116985 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 11q13.4 CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
23086 EXPH5 SLAC2-B | SLAC2B exophilin 5 11q22.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
220296 HEPACAM GlialCAM | MLC2A | MLC2B hepatic and glial cell adhesion molecule 11q24.2 CV:PGCnp
23085 ERC1 Cast2 | ELKS | ERC-1 | RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 12p13.3 CV:GWASdb
CV:PGCnp
GO_Annotation
PROTEIN CLUSTERING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
694 BTG1 - B-cell translocation gene 1, anti-proliferative 12q22 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
64211 LHX5 - LIM homeobox 5 12q24 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
23143 LRCH1 CHDC1 | NP81 leucine-rich repeats and calponin homology (CH) domain containing 1 13q14.11 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
7546 ZIC2 HPE5 Zic family member 2 13q32 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
5611 DNAJC3 ACPHD | ERdj6 | HP58 | P58 | P58IPK | PRKRI DnaJ heat shock protein family (Hsp40) member C3 13q32.1 CV:PGCnp
394 ARHGAP5 GFI2 | RhoGAP5 | p190-B | p190BRhoGAP Rho GTPase activating protein 5 14q12 CV:PGCnp
GSMA_I
57546 PDP2 PPM2B | PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 16q22.1 CV:PGCnp
766 CA7 CAVII carbonic anhydrase VII 16q22.1 CV:PGCnp
DMG:Jaffe_2016
794 CALB2 CAB29 | CAL2 | CR calbindin 2 16q22.2 CV:PGCnp G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
9423 NTN1 NTN1L netrin 1 17p13.1 CV:GWASdb
CV:PGCnp
GO_Annotation
Ascano FMRP targets
3975 LHX1 LIM-1 | LIM1 LIM homeobox 1 17q12 CNV:YES
CV:PGCnp
GO_Annotation
PMID:cooccur
5797 PTPRM PTPRL1 | R-PTP-MU | RPTPM | RPTPU | hR-PTPu protein tyrosine phosphatase, receptor type M 18p11.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
Potential synaptic genes
25925 ZNF521 EHZF | Evi3 zinc finger protein 521 18q11.2 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Darnell FMRP targets
Ascano FMRP targets
80148 PQLC1 - PQ loop repeat containing 1 18q23 CV:PGCnp
126006 PCP2 GPSM4 Purkinje cell protein 2 19p13.2 CV:PGCnp
5184 PEPD PROLIDASE peptidase D 19q13.11 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
845 CASQ2 PDIB2 calsequestrin 2 1p13.1 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
55223 TRIM62 DEAR1 tripartite motif containing 62 1p35.1 CV:PGCnp
DMG:Wockner_2014
4881 NPR1 ANPRA | ANPa | GUC2A | GUCY2A | NPRA natriuretic peptide receptor 1 1q21-q22 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
4807 NHLH1 HEN1 | NSCL | NSCL1 | bHLHa35 nescient helix-loop-helix 1 1q22 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
80781 COL18A1 KNO | KNO1 | KS collagen type XVIII alpha 1 21q22.3 CV:PGCnp
DMG:Wockner_2014
7263 TST RDS thiosulfate sulfurtransferase 22q13.1 CV:PGCnp
PMID:cooccur
9637 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 2p21 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
55183 RIF1 - replication timing regulatory factor 1 2q23.3 CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
Network
CompositeSet
7545 ZIC1 CRS6 | ZIC | ZNF201 Zic family member 1 3q24 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
90407 TMEM41A 2900010K02Rik transmembrane protein 41A 3q27.2 CV:PGCnp
3815 KIT C-Kit | CD117 | PBT | SCFR KIT proto-oncogene receptor tyrosine kinase 4q12 CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
6550 SLC9A3 NHE-3 | NHE3 solute carrier family 9 member A3 5p15.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55722 CEP72 - centrosomal protein 72kDa 5p15.33 CV:PGCnp
DMG:Montano_2016
Ascano FMRP targets
202333 CMYA5 C5orf10 | SPRYD2 | TRIM76 cardiomyopathy associated 5 5q14.1 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
4163 MCC MCC1 mutated in colorectal cancers 5温度系数 CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
1839 HBEGF DTR | DTS | DTSF | HEGFL heparin binding EGF like growth factor 5 q23处 CV:PGCnp
GSMA_I
2559 GABRA6 - gamma-aminobutyric acid type A receptor alpha6 subunit 5q34 Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
LIGAND GATED ION SIGNALING
221687 RNF182 - ring finger protein 182 6p23 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
81491 GPR63 PSP24(beta) | PSP24B G protein-coupled receptor 63 6q16.1-q16.3 CV:PGCnp
154043 CNKSR3 MAGI1 CNKSR family member 3 6q25.2 CV:PGCnp
DMG:Nishioka_2013
26261 FBXO24 FBX24 F-box protein 24 7q22 CV:PGCnp
2020 EN2 - engrailed homeobox 2 7q36 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
55636 CHD7 CRG | HH5 | IS3 | KAL5 chromodomain helicase DNA binding protein 7 8q12.2 CV:GWASdb
CV:PGCnp
Ascano FMRP targets
80243 精准医疗X2 6230420N16Rik | DEP.2 | DEPDC2 | P-REX2 | PPP1R129 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 8q13.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
9414 TJP2 C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2 tight junction protein 2 9q13-q21 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
1756 DMD BMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85 dystrophin Xp21.2 CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet


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