Search results: The pahtwayp3502has 170 genes in the original annotation. Currently, there are 107 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
91452 ACBD5 - acyl-CoA binding domain containing 5 10p12.1 CV:PGCnp CompositeSet
23412 COMMD3 BUP | C10orf8 COMM domain containing 3 10p12.2 CV:PGCnp
DMG:Nishioka_2013
132 ADK AK adenosine kinase 10q22|10q11-q24 CV:PGCnp
PMID:cooccur
2018 EMX2 - empty spiracles homeobox 2 10q26.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
90993 CREB3L1 OASIS cAMP responsive element binding protein 3-like 1 11p11.2 CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3939 LDHA GSD11 | HEL-S-133P | LDHM | PIG19 lactate dehydrogenase A 11p15.4 CV:PGCnp
Expression
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5091 PC PCB pyruvate carboxylase 11q13.4-q13.5 CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
283149 BCL9L BCL9-2 | DLNB11 B-cell CLL/lymphoma 9-like 11q23.3 CV:PGCnp
GSMA_I
CompositeSet
Darnell FMRP targets
6768 ST14 ARCI11 | HAI | MT-SP1 | MTSP1 | PRSS14 | SNC19 | TADG15 | TMPRSS14 suppression of tumorigenicity 14 11q24-q25 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
27087 B3GAT1 CD57 | GLCATP | GLCUATP | HNK1 | LEU7 | NK-1 | NK1 beta-1,3-glucuronyltransferase 1 11q25 CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
83700 JAM3 JAM-2 | JAM-3 | JAM-C | JAMC junctional adhesion molecule 3 11q25 CV:PGCnp
160518 DENND5B - DENN domain containing 5B 12p11.21 CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
121536 AEBP2 - AE binding protein 2 12p12.3 CV:PGCnp
DMG:Jaffe_2016
81029 WNT5B - wingless-type MMTV integration site family member 5B 12p13.3 CV:PGCnp
DMG:Montano_2016
2583 B4GALNT1 GALGT | GALNACT | GalNAc-T | SPG26 beta-1,4-N-acetyl-galactosaminyltransferase 1 12q13.3 CV:PGCnp
DMG:Wockner_2014
3479 IGF1 IGF-I | IGFI | MGF 胰岛素样生长因子1 12q23.2 CV:PGCnp
GO_Annotation
PMID:cooccur
6927 HNF1A HNF-1A | HNF1 | IDDM20 | LFB1 | MODY3 | TCF-1 | TCF1 HNF1 homeobox A 12q24.2 CV:PGCnp
DMG:Wockner_2014
Network
2155 F7 SPCA coagulation factor VII 13q34 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
55632 G2E3 KIAA1333 | PHF7B G2/M-phase specific E3 ubiquitin protein ligase 14q12 CV:PGCnp
GSMA_I
5411 PNN DRS | DRSP | SDK3 | memA pinin, desmosome associated protein 14q21.1 CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
112752 IFT43 C14orf179 | CED3 intraflagellar transport 43 14q24.3 CV:PGCnp
145482 PTGR2 HEL-S-298 | PGR2 | ZADH1 prostaglandin reductase 2 14q24.3 CV:PGCnp
DMG:Wockner_2014
9369 NRXN3 C14orf60 neurexin 3 14q31 CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
84334 APOPT1 APOP | APOP1 | C14orf153 apoptogenic 1, mitochondrial 14q32.33 CV:GWAScat
CV:PGC128
CV:PGCnp
123606 NIPA1 FSP3 | SPG6 non imprinted in Prader-Willi/Angelman syndrome 1 15q11.2 CV:PGCnp
PMID:cooccur
2562 GABRB3 ECA5 gamma-aminobutyric acid type A receptor beta3 subunit 15q12 CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
1159 CKMT1B CKMT | CKMT1 | UMTCK creatine kinase, mitochondrial 1B 15q15 CV:PGCnp G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1512 CTSH ACC-4 | ACC-5 | ACC4 | ACC5 | CPSB cathepsin H 15q25.1 CV:PGCnp
57020 C16orf62 - chromosome 16 open reading frame 62 16p12.3 CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
146279 TEKT5 CT149 tektin 5 16p13.13 CV:PGCnp
DNM:Xu_2012
CompositeSet
1387 CREBBP CBP | KAT3A | RSTS CREB binding protein 16p13.3 CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
90850 ZNF598 - zinc finger protein 598 16p13.3 CV:PGCnp
DMG:Jaffe_2016
80178 C16orf59 - chromosome 16 open reading frame 59 16p13.3 CV:PGCnp
PMID:cooccur
113 ADCY7 AC7 adenylate cyclase 7 16q12.1 CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
84937 ZNRF1 NIN283 zinc and ring finger 1, E3 ubiquitin protein ligase 16q23.1 DMG:Wockner_2014
197257 LDHD DLD lactate dehydrogenase D 16q23.1 CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
644815 FAM83G PAWS1 family with sequence similarity 83 member G 17p11.2 CV:PGCnp Ascano FMRP targets
124935 SLC43A2 LAT4 solute carrier family 43 member 2 17p13.3 CV:PGCnp
DMG:Wockner_2014
9527 GOSR1 GOLIM2 | GOS-28 | GOS28 | GOS28/P28 | GS28 | P28 golgi SNAP receptor complex member 1 17q11 CV:PGCnp
GO_Annotation
9902 MRC2 CD280 | CLEC13E | ENDO180 | UPARAP mannose receptor, C type 2 17q23.2 CV:PGCnp
DNM:Fromer_2014
CompositeSet
114757 CYGB HGB | STAP cytoglobin 17q25.1 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5886 RAD23A HHR23A | HR23A RAD23 homolog A, nucleotide excision repair protein 19p13.2 CV:PGCnp
3949 LDLR FH | FHC | LDLCQ2 low density lipoprotein receptor 19p13.2 CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
147837 ZNF563 - zinc finger protein 563 19p13.2 CV:PGCnp
DMG:Wockner_2014
5050 PAFAH1B3 PAFAHG platelet activating factor acetylhydrolase 1b catalytic subunit 3 19q13.1 GO_Annotation
PMID:cooccur
5739 PTGIR IP | PRIPR prostaglandin I2 (prostacyclin) receptor (IP) 19q13.3 CV:PGCnp
6566 SLC16A1 HHF7 | MCT | MCT1 | MCT1D solute carrier family 16 member 1 1p12 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
260425 MAGI3 MAGI-3 | dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 1p13.2 Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_WM
GSMA_I
27159 CHIA AMCASE | CHIT2 | TSA1902 chitinase, acidic 1p13.2 CV:PGCnp
GSMA_I
PMID:cooccur
476 ATP1A1 - ATPase Na+/K+ transporting subunit alpha 1 1p21 CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanARC
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
676 BRDT BRD6 | CT9 bromodomain testis associated 1p22.1 CV:PGCnp
PMID:cooccur
55283 MCOLN3 TRP-ML3 | TRPML3 mucolipin 3 1p22.3 CV:PGCnp
6342 SCP2 NLTP | NSL-TP | SCP-2 | SCP-CHI | SCP-X | SCPX sterol carrier protein 2 1p32 CV:PGCnp
DMG:Wockner_2014
55624 POMGNT1 GNTI.2 | GnT I.2 | LGMD2O | MEB | MGAT1.2 | gnT-I.2 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 1p34.1 DMG:vanEijk_2014
60313 GPBP1L1 SP192 GC-rich promoter binding protein 1 like 1 1p34.1 CV:PGCnp
DMG:Wockner_2014
8672 EIF4G3 eIF-4G 3 | eIF4G 3 | eIF4GII eukaryotic translation initiation factor 4 gamma 3 1p36.12 CV:GWAScat
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
23261 CAMTA1 CANPMR calmodulin binding transcription activator 1 1p36.31-p36.23 CV:PGCnp
DNM:McCarthy_2014
CompositeSet
Darnell FMRP targets
1163 CKS1B CKS1 | PNAS-16 | PNAS-18 | ckshs1 CDC28 protein kinase regulatory subunit 1B 1q21.2 CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
6646 SOAT1 ACACT | ACAT | ACAT-1 | ACAT1 | SOAT | STAT sterol O-acyltransferase 1 1q25 CV:PGCnp
DNM:Fromer_2014
CompositeSet
1604 CD55 CR | CROM | DAF | TC CD55 molecule (Cromer blood group) 1q32 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
59352 LGR6 GPCR | VTS20631 leucine-rich repeat containing G protein-coupled receptor 6 1q32.1 CV:PGCnp
DMG:Wockner_2014
55304 SPTLC3 C20orf38 | LCB2B | LCB3 | SPT3 | SPTLC2L | dJ718P11 | dJ718P11.1 | hLCB2b serine palmitoyltransferase long chain base subunit 3 20p12.1 CV:GWASdb
CV:PGCnp
GSMA_I
5621 PRNP ASCR | AltPrP | CD230 | CJD | GSS | KURU | PRIP | PrP | PrP27-30 | PrP33-35C | PrPc | p27-30 prion protein 20p13 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
128853 DUSP15 C20orf57 | VHY dual specificity phosphatase 15 20q11.21 CV:PGCnp
DNM:Fromer_2014
CompositeSet
1522 CTSZ CTSX cathepsin Z 20q13.32 CV:PGCnp
DMG:vanEijk_2014
3460 IFNGR2 AF-1 | IFGR2 | IFNGT1 | IMD28 interferon gamma receptor 2 (interferon gamma transducer 1) 21 q22.11 CV:PGCnp
DMG:Wockner_2014
3772 KCNJ15 IRKK | KIR1.3 | KIR4.2 potassium voltage-gated channel subfamily J member 15 21q22.2 CV:PGCnp
DMG:Wockner_2014
861 RUNX1 AML1 | AML1-EVI-1 |MLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpha runt related transcription factor 1 21q22.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
130271 PLEKHH2 PLEKHH1L pleckstrin homology, MyTH4 and FERM domain containing H2 2p21 CV:PGCnp
DNM:McCarthy_2014
9913 SUPT7L SPT7L | STAF65 | STAF65(gamma) | STAF65G | SUPT7H SPT7-like STAGA complex gamma subunit 2p23.3 CV:PGCnp
DMG:Nishioka_2013
6382 SDC1 CD138 | SDC | SYND1 | syndecan syndecan 1 2p24.1 CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
4118 MAL - mal T-cell differentiation protein 2q11.1 CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
29842 TFCP2L1 CRTR1 | LBP-9 | LBP9 transcription factor CP2-like 1 2q14 CV:PGCnp
DNM:McCarthy_2014
Expression
GSMA_I
GSMA_IIA
3176 HNMT HMT | HNMT-S1 | HNMT-S2 | MRT51 histamine N-methyltransferase 2q22.1 CV:PGCnp
DEG:Sanders_2013
GSMA_I
GSMA_IIA
PMID:cooccur
2591 GALNT3 GalNAc-T3 | HFTC | HHS polypeptide N-acetylgalactosaminyltransferase 3 2q24-q31 CV:PGCnp
GSMA_IIA
7273 TTN CMD1G | CMH9 | CMPD4 | EOMFC | HMERF | LGMD2J | MYLK5 | TMD titin 2q31 CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
Network
CompositeSet
7048 TGFBR2 AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RII transforming growth factor beta receptor II 3p22 CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
63891 RNF123 FP1477 | KPC1 ring finger protein 123 3p24.3 CV:PGCnp
DMG:Jaffe_2016
27255 CNTN6 NB3 contactin 6 3p26.3 CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
6565 SLC15A2 PEPT2 solute carrier family 15 member 2 3q13.33 CV:PGCnp
Expression
29970 SCHIP计划1 SCHIP计划-1 schwannomin interacting protein 1 3q25.32-q25.33 CV:PGCnp
DMG:Wockner_2014
6657 SOX2 ANOP3 | MCOPS3 SRY-box 2 3q26.33 Expression
PMID:cooccur
389206 BEND4 CCDC4 BEN domain containing 4 4p13 CV:PGCnp
2044 EPHA5 CEK7 | EHK-1 | EHK1 | EK7 | HEK7 | TYRO4 EPH receptor A5 4q13.1 CV:PGCnp
CV:PheWAS
150159 SLC9B1 NHA1 | NHEDC1 solute carrier family 9 member B1 4q24 CV:PGCnp
8467 SMARCA5 ISWI | SNF2H | WCRF135 | hISWI | hSNF2H SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 4q31.1-q31.2 CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
Chromatin Remodeling Genes
11341 SCRG1 SCRG-1 stimulator of chondrogenesis 1 4q34.1 CV:PGCnp
GO_Annotation
PMID:cooccur
26064 RAI14 NORPEG | RAI13 retinoic acid induced 14 5p13.3-p13.2 CV:PGCnp
DNM:McCarthy_2014
Network
133418 EMB GP70 embigin 5q11.1 CV:PGCnp
3796 KIF2A CDCBM3 | HK2 | KIF2 kinesin heavy chain member 2A 5q12-q13 Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
1452 CSNK1A1 CK1 | CK1a | CKIa | HEL-S-77p | HLCDGP1 | PRO2975 casein kinase 1 alpha 1 5q32 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
4199 ME1 HUMNDME | MES malic enzyme 1, NADP(+)-dependent, cytosolic 6q12 CV:PGCnp
2697 GJA1 AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCA gap junction protein alpha 1 6q22.31 CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
81706 PPP1R14C CPI17-like | KEPI | NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C 6q24.3-q25.3 CV:GWASdb
CV:PGCnp
222894 FERD3L N-TWIST | NATO3 | NTWIST | bHLHa31 Fer3-like bHLH transcription factor 7p21.1 CV:PGCnp
DMG:Wockner_2014
113263 GLCCI1 FAM117C | GCTR | GIG18 | TSSN1 糖皮质激素诱导1 7p21.3 CV:PGCnp
DMG:Wockner_2014
9069 CLDN12 - claudin 12 7q21 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
4897 NRCAM - neuronal cell adhesion molecule 7q31 CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
2041 EPHA1 EPH | EPHT | EPHT1 EPH receptor A1 7q34 DMG:Wockner_2014
1191 CLU AAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2 clusterin 8p21-p12 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
57509 MTUS1 ATBP | ATIP | ICIS | MP44 | MTSG1 microtubule associated tumor suppressor 1 8p22 CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
734 OSGIN2 C8orf1 | hT41 oxidative stress induced growth inhibitor family member 2 8q21 CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
22827 PUF60 FIR | RoBPI | SIAHBP1 | VRJS poly(U) binding splicing factor 60KDa 8q24.3 CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
57210 SLC45A4 - solute carrier family 45 member 4 8q24.3 CV:GWASdb
CV:PGCnp
54108 CHRAC1 CHARC1 | CHARC15 | CHRAC-1 | CHRAC-15 | CHRAC15 | YCL1 chromatin accessibility complex 1 8q24.3 CV:PGCnp
DMG:Nishioka_2013
23196 FAM120A C9orf10 | DNAPTP1 | DNAPTP5 | OSSA family with sequence similarity 120A 9q22.31 CV:PGCnp CompositeSet
Darnell FMRP targets
546 ATRX ATR2 | JMS | MRX52 | MRXHF1 | RAD54 | RAD54L | SFM1 | SHS | XH2 | XNP | ZNF-HX alpha thalassemia/mental retardation syndrome X-linked Xq21.1 CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes


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