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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group? | Functional group? |
|---|---|---|---|---|---|---|
| 55176 | SEC61A2 | - | Sec61 translocon alpha 2 subunit | 10p14 | CV:PGCnp | |
| 3257 | HPS1 | BLOC3S1 | HPS | HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 | 10q23.1-q23.3 | CV:PGCnp PMID:cooccur |
|
| 6001 | RGS10 | - | regulator of G-protein signaling 10 | 10q25 | CV:PGCnp DMG:Wockner_2014 Network PMID:cooccur |
|
| 26580 | BSCL2 | GNG3LG | HMN5 | PELD | SPG17 | Berardinelli-Seip congenital lipodystrophy 2 (seipin) | 11q13 | DMG:Jaffe_2016 DMG:Wockner_2014 |
|
| 4314 | MMP3 | CHDS6 | MMP-3 | SL-1 | STMY | STMY1 | STR1 | matrix metallopeptidase 3 | 11q22.3 | PMID:cooccur | |
| 3606 | IL18 | IGIF | IL-18 | IL-1g | IL1F4 | interleukin 18 | 11q23.1 | Association CV:PGCnp GR_WM GSMA_I PMID:cooccur |
|
| 114609 | TIRAP | BACTS1 | Mal | MyD88-2 | wyatt | toll-interleukin 1 receptor (TIR) domain containing adaptor protein | 11q24.2 | CV:PGCnp DMG:Wockner_2014 |
|
| 2 | A2M | A2MD | CPAMD5 | FWP007 | S863-7 | alpha-2-macroglobulin | 12p13.31 | CV:PGCnp DMG:Wockner_2014 Network |
|
| 84975 | MFSD5 | hsMOT2 | major facilitator superfamily domain containing 5 | 12q13.13 | CV:PGCnp | |
| 5787 | PTPRB | HPTP-BETA | HPTPB | PTPB | R-PTP-BETA | VEPTP | protein tyrosine phosphatase, receptor type B | 12q15 | CV:GWASdb CV:PGCnp |
|
| 7184 | HSP90B1 | ECGP | GP96 | GRP94 | HEL-S-125m | HEL35 | TRA1 | heat shock protein 90kDa beta family member 1 | 12q24.2-q24.3 | CV:PGCnp DMG:Jaffe_2016 |
RNA AND PROTEIN SYNTHESIS G2Cdb.humanPSD G2Cdb.humanPSP Ascano FMRP targets |
| 55884 | WSB2 | SBA2 | WD repeat and SOCS box containing 2 | 12q24.23 | CV:PGCnp DMG:Wockner_2014 |
|
| 51433 | ANAPC5 | APC5 | anaphase promoting complex subunit 5 | 12q24.31 | CV:PGCnp DNM:Fromer_2014 |
CompositeSet |
| 22862 | FNDC3A | FNDC3 | HUGO | bA203I16.1 | bA203I16.5 | fibronectin type III domain containing 3A | 13q14.2 | CV:PGCnp DMG:vanEijk_2014 |
|
| 10668 | CGRRF1 | CGR19 | RNF197 | cell growth regulator with ring finger domain 1 | 14q22.2 | CV:PGCnp DMG:Jaffe_2016 DMG:vanEijk_2014 |
|
| 145482 | PTGR2 | HEL-S-298 | PGR2 | ZADH1 | prostaglandin reductase 2 | 14q24.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 7127 | TNFAIP2 | B94 | EXOC3L3 | TNF alpha induced protein 2 | 14q32 | CV:PGCnp DEG:Zhao_2015 |
|
| 10914 | PAPOLA | PAP | poly(A) polymerase alpha | 14q32.31 | CV:PGCnp DMG:Wockner_2014 |
|
| 8482 | SEMA7A | CD108 | CDw108 | H-SEMA-K1 | H-Sema-L | JMH | SEMAK1 | SEMAL | semaphorin 7(约翰·弥尔顿Hagen血型) | 15q22.3-q23 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GO_Annotation |
|
| 9493 | KIF23 | CHO1 | KNSL5 | MKLP-1 | MKLP1 | kinesin family member 23 | 15q23 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 |
|
| 83640 | FAM103A1 | C15orf18 | HsT19360 | RAM | family with sequence similarity 103 member A1 | 15q25.2 | CV:PGCnp | |
| 5493 | PPL | - | periplakin | 16p13.3 | CV:PGCnp PMID:cooccur |
|
| 5681 | PSKH1 | - | protein serine kinase H1 | 16q22.1 | CV:PGCnp | |
| 7566 | ZNF18 | HDSG1 | KOX11 | ZKSCAN6 | ZNF535 | ZSCAN38 | Zfp535 | zinc finger protein 18 | 17p11.2 | CV:PGCnp | Ascano FMRP targets |
| 5376 | PMP22 | CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110 | peripheral myelin protein 22 | 17p12 | CV:PGCnp DEG:Zhao_2015 GO_Annotation PMID:cooccur |
|
| 63826 | SRR | ILV1 | ISO1 | serine racemase | 17p13 | Association CV:GWAScat CV:GWASdb CV:PGC128 CV:PGCnp GR_COR GR_WM PMID:cooccur |
G2Cdb.humanPSD G2Cdb.humanPSP Potential synaptic genes |
| 58191 | CXCL16 | CXCLG16 | SR-PSOX | SRPSOX | C-X-C motif chemokine ligand 16 | 17p13 | PMID:cooccur | |
| 1362 | CPD | GP180 | carboxypeptidase D | 17q11.2 | CV:PGCnp GO_Annotation PMID:cooccur |
Ascano FMRP targets |
| 10493 | VAT1 | VATI | vesicle amine transport 1 | 17q21 | CV:PGCnp | |
| 80279 | CDK5RAP3 | C53 | HSF-27 | IC53 | LZAP | MST016 | OK/SW-cl.114 | PP1553 | CDK5 regulatory subunit associated protein 3 | 17q21.32 | CV:PGCnp DMG:Jaffe_2016 GO_Annotation |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.humanPSD G2Cdb.humanPSP |
| 11248 | NXPH3 | NPH3 | neurexophilin 3 | 17q21.33 | DMG:Jaffe_2016 GO_Annotation |
|
| 3607 | FOXK2 | ILF | ILF-1 | ILF1 | forkhead box K2 | 17q25 | CV:PGCnp DMG:Wockner_2014 |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 1453 | CSNK1D | ASPS | CKIdelta | FASPS2 | HCKID | casein kinase 1 delta | 17q25 | DMG:Wockner_2014 Network PMID:cooccur |
|
| 396 | ARHGDIA | GDIA1 | HEL-S-47e | NPHS8 | RHOGDI | RHOGDI-1 | Rho GDP dissociation inhibitor (GDI) alpha | 17q25.3 | PMID:cooccur | EXOCYTOSIS CompositeSet |
| 9021 | SOCS3 | ATOD4 | CIS3 | Cish3 | SOCS-3 | SSI-3 | SSI3 | 抑制细胞因子信号3 | 17q25.3 | CV:PGCnp PMID:cooccur |
|
| 10892 | MALT1 | IMD12 | MLT | MLT1 | PCASP1 | MALT1 paracaspase | 18q21 | CV:PGCnp DMG:Jaffe_2016 |
|
| 55748 | CNDP2 | CN2 | CPGL | HEL-S-13 | HsT2298 | PEPA | CNDP dipeptidase 2 (metallopeptidase M20 family) | 18q22.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 DNM:Gulsuner_2013 |
|
| 115098 | CCDC124 | - | coiled-coil domain containing 124 | 19p13.11 | CV:PGCnp DMG:vanEijk_2014 |
|
| 55620 | STAP2 | BKS | signal transducing adaptor family member 2 | 19p13.3 | CV:PGCnp DNM:Xu_2012 |
CompositeSet |
| 57616 | TSHZ3 | TSH3 | ZNF537 | teashirt zinc finger homeobox 3 | 19q12 | CV:GWASdb CV:PGCnp |
Ascano FMRP targets |
| 10848 | PPP1R13L | IASPP | NKIP1 | RAI | RAI4 | protein phosphatase 1 regulatory subunit 13 like | 19q13.32 | CV:PGCnp DMG:Wockner_2014 |
|
| 26227 | PHGDH | 3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERA | phosphoglycerate dehydrogenase | 1p12 | CV:PGCnp GO_Annotation GSMA_I GSMA_IIA PMID:cooccur |
CELL METABOLISM G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet |
| 1435 | CSF1 | CSF-1 | MCSF | colony stimulating factor 1 | 1p13.3 | CV:PGCnp DMG:Wockner_2014 GSMA_I |
|
| 57685 | CACHD1 | - | cache domain containing 1 | 1p31.3 | CV:GWASdb CV:PGCnp GSMA_IIA |
Ascano FMRP targets |
| 2140 | EYA3 | - | EYA transcriptional coactivator and phosphatase 3 | 1p36 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 |
|
| 51107 | APH1A | 6530402N02Rik | APH-1 | APH-1A | CGI-78 | aph-1 homolog A, gamma secretase subunit | 1p36.13-q31.3 | CV:PGCnp DMG:Wockner_2014 GSMA_I GSMA_IIA PMID:cooccur |
NEUROTROPHIN SIGNALING |
| 5293 | PIK3CD | APDS | IMD14 | P110DELTA | PI3K | p110D | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta | 1p36.2 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
|
| 10262 | SF3B4 | AFD1 | Hsh49 | SAP49 | SF3b49 | splicing factor 3b subunit 4 | 1q21.2 | CV:PGCnp DMG:Jaffe_2016 GSMA_I GSMA_IIA |
|
| 10903 | MTMR11 | CRA | myotubularin related protein 11 | 1q21.2 | CV:PGCnp GSMA_I GSMA_IIA |
|
| 126638 | RPTN | - | repetin | 1q21.3 | CV:PGCnp GSMA_IIA PMID:cooccur |
|
| 4921 | DDR2 | MIG20a | NTRKR3 | TKT | TYRO10 | discoidin domain receptor tyrosine kinase 2 | 1q23.3 | CV:PGCnp GO_Annotation GSMA_IIA PMID:cooccur |
|
| 55827 | DCAF6 | 1200006M05Rik | ARCAP | IQWD1 | MSTP055 | NRIP | PC326 | DDB1 and CUL4 associated factor 6 | 1q24.2 | CV:PGCnp DMG:Jaffe_2016 |
CompositeSet Darnell FMRP targets |
| 9877 | ZC3H11A | ZC3HDC11A | zinc finger CCCH-type containing 11A | 1q32.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 3055 | HCK | JTK9 | p59Hck | p61Hck | HCK proto-oncogene, Src family tyrosine kinase | 20q11-q12 | CV:PGCnp Network |
CompositeSet |
| 26133 | TRPC4AP | C20orf188 | PPP1R158 | TRRP4AP | TRUSS | transient receptor potential cation channel subfamily C member 4 associated protein | 20q11.22 | CV:PGCnp | CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 3911 | LAMA5 | - | laminin subunit alpha 5 | 20q13.2-q13.3 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
|
| 9946 | CRYZL1 | 4P11 | QOH-1 | crystallin zeta like 1 | 21q21.3 | CV:PGCnp | |
| 7267 | TTC3 | DCRR1 | RNF105 | TPRDIII | tetratricopeptide repeat domain 3 | 21q22.2 | CV:PGCnp DMG:Wockner_2014 |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 8867 | SYNJ1 | INPP5G | PARK20 | synaptojanin 1 | 21q22.2 | CV:PGCnp GO_Annotation Network PMID:cooccur |
ENDOCYTOSIS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.human_clathrin G2Cdb.human_mGluR5 G2Cdb.human_Synaptosome CompositeSet Darnell FMRP targets Potential synaptic genes |
| 5902 | RANBP1 | HTF9A | RAN binding protein 1 | 22q11.21 | Association CNV:YES CV:PGCnp DMG:Jaffe_2016 GR_WM GSMA_I Network PMID:cooccur |
|
| 6663 | SOX10 | DOM | PCWH | WS2E | WS4 | WS4C | SRY-box 10 | 22q13.1 | Association DEG:Zhao_2015 DMG:Wockner_2014 GO_Annotation GR_COR GR_Ng GR_WM PMID:cooccur |
|
| 29781 | NCAPH2 | CAPH2 | non-SMC condensin II complex subunit H2 | 22q13.33 | CV:PGCnp | Ascano FMRP targets |
| 9448 | MAP4K4 | FLH21957 | HEL-S-31 | HGK | MEKKK4 | NIK | mitogen-activated protein kinase kinase kinase kinase 4 | 2q11.2-q12 | CV:PGCnp DMG:Nishioka_2013 DNM:Guipponi_2014 GSMA_I |
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.humanPSD G2Cdb.humanPSP CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 317649 | EIF4E3 | eIF-4E3 | eIF4E-3 | eukaryotic translation initiation factor 4E family member 3 | 3p14 | CV:PGCnp GSMA_IIA GSMA_IIE |
|
| 2317 | FLNB | ABP-278 | ABP-280 | AOI | FH1 | FLN-B | FLN1L | LRS1 | SCT | TABP | TAP | filamin B | 3p14.3 | Association CV:PGCnp DMG:Wockner_2014 GO_Annotation |
Ascano FMRP targets |
| 1605 | DAG1 | 156DAG | A3a | AGRNR | DAG | MDDGA9 | MDDGC7 | MDDGC9 | dystroglycan 1 | 3p21 | CV:PGCnp DMG:Jaffe_2016 |
|
| 10181 | RBM5 | G15 | H37 | LUCA15 | RMB5 | RNA binding motif protein 5 | 3p21.3 | CV:PGCnp | Ascano FMRP targets |
| 5580 | PRKCD | ALPS3 | CVID9 | MAY1 | PKCD | nPKC-delta | protein kinase C delta | 3p21.31 | CV:PGCnp DEG:Sanders_2013 Network |
CANABINOID INTRACELLULAR SIGNAL TRANSDUCTION METABOTROPIC GLUTAMATE RECEPTOR SEROTONIN |
| 5210 | PFKFB4 | - | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 | 3p22-p21 | DEG:Zhao_2015 | |
| 79885 | HDAC11 | HD11 | histone deacetylase 11 | 3p25.1 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 GSMA_I PMID:cooccur |
Chromatin Remodeling Genes |
| 5504 | PPP1R2 | IPP-2 | IPP2 | protein phosphatase 1 regulatory inhibitor subunit 2 | 3q29 | CV:PGCnp PMID:cooccur |
|
| 254251 | LCORL | MLR1 | ligand dependent nuclear receptor corepressor like | 4p15.31 | CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
|
| 10608 | MXD4 | MAD4 | MST149 | MSTP149 | bHLHc12 | MAX dimerization protein 4 | 4p16.3 | CV:PGCnp | |
| 166378 | SPATA5 | AFG2 | EHLMRS | SPAF | spermatogenesis associated 5 | 4q28.1 | CV:PGCnp DMG:Jaffe_2016 DNM:Xu_2012 |
CompositeSet |
| 831 | CAST | BS-17 | PLACK | calpastatin | 5q15 | CV:PGCnp PMID:cooccur |
Ascano FMRP targets |
| 4001 | LMNB1 | ADLD | LMN | LMN2 | LMNB | lamin B1 | 5q23.2 | CV:PGCnp DMG:Nishioka_2013 DMG:Wockner_2014 GSMA_I Network |
G2Cdb.humanNRC |
| 81848 | SPRY4 | HH17 | sprouty RTK signaling antagonist 4 | 5q31.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GO_Annotation GSMA_I PMID:cooccur |
|
| 1436 | CSF1R | C-FMS | CD115 | CSF-1R | CSFR | FIM2 | FMS | HDLS | M-CSF-R | colony stimulating factor 1 receptor | 5q32 | CV:PGCnp GSMA_I GSMA_IIA GSMA_IIE PMID:cooccur |
|
| 9945 | GFPT2 | GFAT | GFAT 2 | GFAT2 | glutamine-fructose-6-phosphate transaminase 2 | 5q34-q35 | CV:PGCnp DMG:Wockner_2014 GO_Annotation GSMA_IIA PMID:cooccur |
|
| 6892 | TAPBP | NGS17 | TAPA | TPN | TPSN | TAP binding protein (tapasin) | 6p21.3 | CV:PGCnp DMG:Jaffe_2016 GSMA_I |
|
| 670 | BPHL | BPH-RP | MCNAA | VACVASE | biphenyl hydrolase-like (serine hydrolase) | 6p25 | CV:PGCnp GSMA_I |
|
| 113263 | GLCCI1 | FAM117C | GCTR | GIG18 | TSSN1 | 糖皮质激素induced 1 | 7p21.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 6863 | TAC1 | Hs.2563 | NK2 | NKNA | NPK | TAC2 | tachykinin precursor 1 | 7q21-q22 | CV:PGCnp GO_Annotation PMID:cooccur |
|
| 222255 | ATXN7L1 | ATXN7L4 | ataxin 7 like 1 | 7的时候.3 | CV:PGCnp | |
| 29969 | MDFIC | HIC | MyoD family inhibitor domain containing | 7q31.1-q31.2 | CV:PGCnp PMID:cooccur |
|
| 57541 | ZNF398 | P51 | P71 | ZER6 | zinc finger protein 398 | 7q36.1 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 |
|
| 115294 | PCMTD1 | - | protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 | 8q11.23 | CV:PGCnp | |
| 1875 | E2F5 | E2F-5 | E2F transcription factor 5 | 8q21.2 | CV:PGCnp DMG:Nishioka_2013 DMG:Wockner_2014 |
|
| 28991 | COMMD5 | HCARG | HT002 | COMM domain containing 5 | 8q24.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 |
|
| 7091 | TLE4 | BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4 | transducin like enhancer of split 4 | 9q21.31 | CV:PGCnp DMG:Jaffe_2016 |
|
| 7357 | UGCG | GCS | GLCT1 | UDP-glucose ceramide glucosyltransferase | 9q31 | CV:PGCnp | |
| 92714 | ARRDC1 | - | arrestin domain containing 1 | 9q34.3 | DNM:Fromer_2014 | CompositeSet |
| 10134 | BCAP31 | 6C6-AG | BAP31 | CDM | DDCH | DXS1357E | B-cell receptor-associated protein 31 | Xq28 | CV:GWASdb GO_Annotation PMID:cooccur |
RNA AND PROTEIN SYNTHESIS Potential synaptic genes |