Search results: The pahtwayp3627has 58 genes in the original annotation. Currently, there are 39 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
8495 PPFIBP2 Cclp1 PPFIA binding protein 2 11p15.4 CV:GWASdb
CV:PGCnp
PROTEIN CLUSTERING
6653 SORL1 C11orf32 | LR11 | LRP9 | SORLA | SorLA-1 | gp250 sortilin-related receptor, L(DLR class) A repeats containing 11q23.2-q24.2 CV:PGCnp
DMG:Montano_2016
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
7070 THY1 CD90 | CDw90 Thy-1 cell surface antigen 11q23.3 DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
2012 EMP1 CL-20 | EMP-1 | TMP epithelial membrane protein 1 12p12.3 CV:PGCnp
DMG:Wockner_2014
3678 ITGA5 CD49e | FNRA | VLA-5 | VLA5A integrin subunit alpha 5 12q13.13 DMG:vanEijk_2014
GO_Annotation
Network
Ascano FMRP targets
8848 TSC22D1 Ptg-2 | TGFB1I4 | TSC22 TSC22 domain family member 1 13q14 CV:PGCnp
DMG:Nishioka_2013
Network
CompositeSet
Darnell FMRP targets
22873 DZIP1 DZIP | DZIPt1 DAZ interacting zinc finger protein 1 13q32.1 CV:PGCnp
1282 COL4A1 BSVD | RATOR collagen type IV alpha 1 13q34 CV:GWASdb
CV:PGCnp
57447 NDRG2 SYLD NDRG family member 2 14q11.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
10278 EFS CAS3 | CASS3 | EFS1 | EFS2 | HEFS | SIN embryonal Fyn-associated substrate 14q11.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
80821 DDHD1 PA-PLA1 | PAPLA1 | SPG28 DDHD domain containing 1 14q21 CV:PGCnp Ascano FMRP targets
1464 CSPG4 HMW-MAA | MCSP | MCSPG | MEL-CSPG | MSK16 | NG2 chondroitin sulfate proteoglycan 4 15q24.2 CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GO_Annotation
CompositeSet
4137 MAPT DDPAC | FTDP-17 | MAPTL | MSTD | MTBT1 | MTBT2 | PPND | PPP1R103 | TAU microtubule associated protein tau 17q21.1 CV:PGCnp
CV:PheWAS
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
2354 FOSB AP-1 | G0S3 | GOS3 | GOSB FBJ murine osteosarcoma viral oncogene homolog B 19q13.32 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
11240 PADI2 PAD-H19 | PAD2 | PDI2 peptidyl arginine deiminase, type II 1p36.13 CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
1292 COL6A2 BTHLM1 | PP3610 | UCMD1 collagen type VI alpha 2 21q22.3 CV:PGCnp
DNM:Fromer_2014
CompositeSet
421 ARVCF - armadillo repeat gene deleted in velocardiofacial syndrome 22q11.21 Association
CNV:YES
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7078 TIMP3 HSMRK222 | K222 | K222TA2 | SFD TIMP metallopeptidase inhibitor 3 22q12.3 Association
CV:PGCnp
GSMA_I
7263 TST RDS thiosulfate sulfurtransferase 22q13.1 CV:PGCnp
PMID:cooccur
5816 PVALB D22S749 parvalbumin 22q13.1 CV:PGCnp
GO_Annotation
PMID:cooccur
2355 FOSL2 FRA2 FOS like antigen 2 2p23.3 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
11117 EMILIN1 EMI | EMILIN | gp115 elastin microfibril interfacer 1 2p23.3-p23.2 CV:PGCnp
10018 BCL2L11 BAM | BIM | BOD BCL2 like 11 2q13 CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
10461 MERTK MER | RP38 | Tyro12 | c-Eyk | c-mer MER proto-oncogene, tyrosine kinase 2q14.1 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
10267 RAMP1 - 受体(G protein-coupled)修改的公关活动otein 1 2q36-q37.1 CV:PGCnp
DMG:Jaffe_2016
8618 CADPS CADPS1 | CAPS | CAPS1 | UNC-31 Ca2+ dependent secretion activator 3p14.2 CV:GWASdb
CV:PGCnp
Network
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
11188 NISCH I-1 | IR1 | IRAS | hIRAS nischarin 3p21.1 CV:PGCnp
LK:YES
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6854 SYN2 SYNII synapsin II 3p25 Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
4045 LSAMP IGLON3 | LAMP limbic system-associated membrane protein 3q13.31 CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
26577 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 3q21-q24 CV:GWASdb
CV:PGCnp
2047 EPHB1 ELK | EPHT2 | Hek6 | NET EPH receptor B1 3q22.2 CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
10608 MXD4 MAD4 | MST149 | MSTP149 | bHLHc12 MAX dimerization protein 4 4p16.3 CV:PGCnp
84249 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 5q31.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
GSMA_I
1836 SLC26A2 D5S1708 | DTD | DTDST | EDM4 | MST153 | MSTP157 solute carrier family 26 member 2 5q32 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
5325 PLAGL1 LOT1 | ZAC | ZAC1 PLAG1 like zinc finger 1 6q24-q25 CV:PGCnp
DMG:Wockner_2014
79683 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 6q25.3 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
857 CAV1 BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21 caveolin 1 7q31.1 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
1191 CLU AAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2 clusterin 8p21-p12 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5730 PTGDS L-PGDS | LPGDS | PDS | PGD2 | PGDS | PGDS2 prostaglandin D2 synthase 9q34.2-q34.3 PMID:cooccur


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