Search results: The pahtwayp3830has 131 genes in the original annotation. Currently, there are 79 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

Because the gene page contains a lot of information, it takes on average 3-5 seconds to load. So when you click a gene ID, please be patient for the page to load.

Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
1592 CYP26A1 CP26 | CYP26 | P450RAI | P450RAI1 cytochrome P450 family 26 subfamily A member 1 10q23-q24 CV:PGCnp
GO_Annotation
PMID:cooccur
6319 SCD FADS5 | MSTP008 | SCD1 | SCDOS | hSCD1 stearoyl-CoA desaturase (delta-9-desaturase) 10q24.31 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
7106 TSPAN4 NAG-2 | NAG2 | TETRASPAN | TM4SF7 | TSPAN-4 tetraspanin 4 11p15.5 CV:PGCnp
DMG:Wockner_2014
3263 HPX HX hemopexin 11p15.5-p15.4 PMID:cooccur
10068 IL18BP IL18BPa interleukin 18 binding protein 11q13 CV:PGCnp
PMID:cooccur
4321 MMP12 HME | ME | MME | MMP-12 matrix metallopeptidase 12 11q22.3 CV:GWASdb
CV:PGCnp
834 CASP1 ICE | IL1BC | P45 caspase 1 11q23 DEG:Sanders_2013
GSMA_I
Network
4837 NNMT - nicotinamide N-methyltransferase 11q23.1 CV:PGCnp
GSMA_I
PMID:cooccur
10445 MCRS1 ICP22BP | INO80Q | MCRS2 | MSP58 | P78 microspherule protein 1 12q13.12 CV:PGCnp
DMG:Jaffe_2016
6404 SELPLG CD162 | CLA | PSGL-1 | PSGL1 selectin P ligand 12q24 CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
51228 GLTP - glycolipid transfer protein 12q24.11 CV:PGCnp
9517 SPTLC2 HSN1C | LCB2 | LCB2A | NSAN1C | SPT2 | hLCB2a serine palmitoyltransferase long chain base subunit 2 14q24.3 CV:PGCnp
Expression
PMID:cooccur
Ascano FMRP targets
5641 LGMN AEP | LGMN1 | PRSC1 legumain 14q32.1 CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
7453 WARS GAMMA-2 | IFI53 | IFP53 tryptophanyl-tRNA synthetase 14q32.31 DNM:Fromer_2014
PMID:cooccur
CompositeSet
5347 PLK1 PLK | STPK13 polo like kinase 1 16p12.2 CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
4489 MT1A MT1 | MT1S | MTC metallothionein 1A 16q13 CV:PGCnp
DMG:Wockner_2014
4502 MT2A MT2 metallothionein 2A 16q13 CV:PGCnp
PMID:cooccur
968 CD68 GP110 | LAMP4 | SCARD1 CD68 molecule 17p13 DEG:Sanders_2013
DMG:vanEijk_2014
PMID:cooccur
6347 CCL2 GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CF C-C motif chemokine ligand 2 17q11.2-q12 CV:PGCnp
Expression
PMID:cooccur
6351 CCL4 ACT2 | AT744.1 | G-26 | HC21 | LAG-1 | LAG1 | MIP-1-beta | MIP1B | MIP1B1 | SCYA2 | SCYA4 C-C motif chemokine ligand 4 17q12 CV:PGCnp
PMID:cooccur
6352 CCL5 D17S136E | RANTES | SCYA5 | SIS-delta | SISd | TCP228 | eoCP C-C motif chemokine ligand 5 17q12 DMG:vanEijk_2014
PMID:cooccur
8153 RND2 ARHN | RHO7 | RhoN Rho family GTPase 2 17q21 CV:PGCnp
2896 GRN CLN11 | GEP | GP88 | PCDGF | PEPI | PGRN granulin 17q21.32 CV:PGCnp
PMID:cooccur
1534 CYB561 CYB561A1 | FRRS2 cytochrome b561 17q23.3 CV:PGCnp
DMG:Wockner_2014
924 CD7 GP40 | LEU-9 | TP41 | Tp40 CD7 molecule 17q25.2-q25.3 DMG:vanEijk_2014
PMID:cooccur
6455 SH3GL1 CNSA1 | EEN | SH3D2B | SH3P8 SH3-domain GRB2-like 1 19p13.3 CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5657 PRTN3 ACPA | AGP7 | C-ANCA | CANCA | MBN | MBT | NP-4 | NP4 | P29 | PR-3 | PR3 proteinase 3 19p13.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
7305 TYROBP DAP12 | KARAP | PLOSL TYRO protein tyrosine kinase binding protein 19q13.12 PMID:cooccur
6237 RRAS - related RAS viral (r-ras) oncogene homolog 19q13.33 CV:PGCnp
DMG:Wockner_2014
963 CD53 MOX44 | TSPAN25 CD53molecule 1p13 CV:GWASdb
CV:PGCnp
GSMA_I
2633 GBP1 - guanylate binding protein 1 1p22.2 CV:PGCnp
PMID:cooccur
115361 GBP4 Mpa2 guanylate binding protein 4 1p22.2 DEG:Sanders_2013
7805 LAPTM5 CLAST6 lysosomal protein transmembrane 5 1p34 CV:PGCnp
22955 SCMH1 Scml3 sex comb on midleg homolog 1 (Drosophila) 1p34 CV:PGCnp Chromatin Remodeling Genes
3932 LCK IMD22 | LSK | YT16 | p56lck | pp58lck LCK proto-oncogene, Src family tyrosine kinase 1p34.3 CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
712 C1QA - complement component 1, q subcomponent, A chain 1p36.12 CV:PGCnp
PMID:cooccur
713 C1QB - complement component 1, q subcomponent, B chain 1p36.12 CV:PGCnp
PMID:cooccur
6277 S100A6 2A9 | 5B10 | CABP | CACY | PRA S100 calcium binding protein A6 1q21 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
6279 S100A8 60B8AG | CAGA | CFAG | CGLA | CP-10 | L1Ag | MA387 | MIF | MRP8 | NIF | P8 S100 calcium binding protein A8 1q21 GSMA_I
GSMA_IIA
PMID:cooccur
6280 S100A9 60B8AG | CAGB | CFAG | CGLB | L1AG | LIAG | MAC387 | MIF | MRP14 | NIF | P14 S100 calcium binding protein A9 1q21 CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
6282 S100A11 HEL-S-43 | MLN70 | S100C S100 calcium binding protein A11 1q21 CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
7832 BTG2 PC3 | TIS21 BTG family member 2 1q32 CV:PGCnp
PMID:cooccur
140885 SIRPA BIT | CD172A | MFR | MYD-1 | P84 | PTPNS1 | SHPS1 | SIRP signal regulatory protein alpha 20p13 CV:PGCnp
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
25939 SAMHD1 CHBL2 | DCIP | HDDC1 | MOP-5 | SBBI88 SAM domain and HD domain 1 20pter-q12 CV:PGCnp
DMG:Jaffe_2016
3055 HCK JTK9 | p59Hck | p61Hck HCK proto-oncogene, Src family tyrosine kinase 20q11-q12 CV:PGCnp
Network
CompositeSet
10544 PROCR CCCA | CCD41 | EPCR protein C receptor 20q11.2 CV:PGCnp
3929 LBP BPIFD2 lipopolysaccharide binding protein 20q11.23 CV:PGCnp
GO_Annotation
PMID:cooccur
5770 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 20q13.1-q13.2 CV:PGCnp
Network
PMID:cooccur
7033 TFF3 ITF | P1B | TFI trefoil factor 3 21q22.3 CV:PGCnp
PMID:cooccur
3689 ITGB2 CD18 | LAD | LCAMB | LFA-1 | MAC-1 | MF17 | MFI7 integrin subunit beta 2 21q22.3 CV:PGCnp
DMG:vanEijk_2014
Network
4689 NCF4 NCF | P40PHOX | SH3PXD4 neutrophil cytosolic factor 4 22q13.1 CV:PGCnp
6772 STAT1 CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91 signal transducer and activator of transcription 1 2q32.2 CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
1230 CCR1 CD191 | CKR-1 | CKR1 | CMKBR1 | HM145 | MIP1aR | SCYAR1 C-C motif chemokine receptor 1 3p21 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
820 CAMP CAP-18 | CAP18 | CRAMP | FALL-39 | FALL39 | HSD26 | LL37 cathelicidin antimicrobial peptide 3p21.3 CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
483 ATP1B3 ATPB-3 | CD298 ATPase Na+/K+ transporting subunit beta 3 3q23 CV:PGCnp
DMG:Wockner_2014
10333 TLR6 CD286 toll like receptor 6 4p14 CV:PGCnp
PMID:cooccur
2919 CXCL1 FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1 C-X-C motif chemokine ligand 1 4q21 CV:PGCnp
GO_Annotation
PMID:cooccur
4283 CXCL9 CMK | Humig | MIG | SCYB9 | crg-10 C-X-C motif chemokine ligand 9 4q21 PMID:cooccur
51316 PLAC8 C15 | DGIC | PNAS-144 | onzin placenta specific 8 4q21.22 CV:PGCnp
DMG:Jaffe_2016
929 CD14 - CD14 molecule 5q31.1 CV:PGCnp
DNM:Fromer_2014
GSMA_I
PMID:cooccur
CompositeSet
972 CD74 DHLAG | HLADG | II | Ia-GAMMA CD74 molecule 5q32 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
1436 CSF1R C-FMS | CD115 | CSF-1R | CSFR | FIM2 | FMS | HDLS | M-CSF-R colony stimulating factor 1 receptor 5q32 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
2878 GPX3 GPx-P | GSHPx-3 | GSHPx-P glutathione peroxidase 3 5q33.1 CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
3108 HLA-DMA D6S222E | DMA | HLADM | RING6 major histocompatibility complex, class II, DM alpha 6p21.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
3109 HLA-DMB D6S221E | RING7 major histocompatibility complex, class II, DM beta 6p21.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3117 HLA-DQA1 CD | CELIAC1 | DQ-A1 | GSE | HLA-DQA major histocompatibility complex, class II, DQ alpha 1 6p21.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3119 HLA-DQB1 CELIAC1 | HLA-DQB | IDDM1 major histocompatibility complex, class II, DQ beta 1 6p21.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3123 HLA-DRB1 DRB1 | DRw10 | HLA-DR1B | HLA-DRB | SS1 主要组织相容性复合体II级,博士打赌a 1 6p21.3 CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
199 AIF1 AIF-1 | IBA1 | IRT-1 | IRT1 allograft inflammatory factor 1 6p21.3 CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
10537 UBD FAT10 | GABBR1 | UBD-3 ubiquitin D 6p21.3 CV:PGCnp
PMID:cooccur
6890 TAP1 ABC17 | ABCB2 | APT1 | D6S114E | PSF-1 | PSF1 | RING4 | TAP1*0102N | TAP1N transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) 6p21.3 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
6892 TAPBP NGS17 | TAPA | TPN | TPSN TAP binding protein (tapasin) 6p21.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
5698 PSMB9 LMP2 | PSMB6i | RING12 | beta1i proteasome subunit beta 9 6p21.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
10758 TRAF3IP2 ACT1 | C6orf2 | C6orf4 | C6orf5 | C6orf6 | CANDF8 | CIKS | PSORS13 TRAF3 interacting protein 2 6q21 CV:PGCnp
DMG:Wockner_2014
10875 FGL2 T49 | pT49 fibrinogen like 2 7q11.23 GO_Annotation
10135 NAMPT 1110035O14Rik | PBEF | PBEF1 | VF | VISFATIN nicotinamide phosphoribosyltransferase 7q22.3 CV:GWASdb
CV:PGCnp
4481 MSR1 CD204 | SCARA1 | SR-A | SRA | phSR1 | phSR2 macrophage scavenger receptor 1 8p22 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
4023 LPL HDLCQ11 | LIPD lipoprotein lipase 8p22 CV:GWASdb
CV:PGCnp
CV:PheWAS
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
1536 CYBB AMCBX2 | CGD | GP91-1 | GP91-PHOX | GP91PHOX | IMD34 | NOX2 | p91-PHOX cytochrome b-245, beta polypeptide Xp21.1 CV:PGCnp
DEG:Sanders_2013


Baidu