Search results: The pahtwayp3878has 74 genes in the original annotation. Currently, there are 50 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
338596 ST8SIA6 SIA8F | SIAT8F | ST8SIA-VI ST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 6 10p12.33 CV:PGCnp
143458 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 11p13 CV:PGCnp
DNM:McCarthy_2014
84866 TMEM25 - transmembrane protein 25 11q23.3 CV:PGCnp
GSMA_I
9638 FEZ1 UNC-76 fasciculation and elongation protein zeta 1 11q24.2 Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
894 CCND2 KIAK0002 | MPPH3 cyclin D2 12p13 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
928 CD9 BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29 CD9 molecule 12p13.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
10154 PLXNC1 CD232 | PLXN-C1 | VESPR plexin C1 12q23.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
10198 MPHOSPH9 MPP-9 | MPP9 M-phase phosphoprotein 9 12q24.31 CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
4734 NEDD4 NEDD4-1 | RPF1 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 15q CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
23191 CYFIP1 P140SRA-1 | SHYC | SRA-1 | SRA1 cytoplasmic FMR1 interacting protein 1 15q11 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
80237 ELL3 - elongation factor for RNA polymerase II 3 15q15.3 CV:PGCnp
DMG:Jaffe_2016
4363 ABCC1 ABC29 | ABCC | GS-X | MRP | MRP1 ATP binding cassette subfamily C member 1 16p13.1 CNV:YES
CV:PGCnp
GSMA_IIE
PMID:cooccur
283847 CCDC79 - coiled-coil domain containing 79 16q22.1 CV:PGCnp
DMG:Wockner_2014
3980 LIG3 LIG2 ligase III, DNA, ATP-dependent 17q11.2-q12 CV:PGCnp Ascano FMRP targets
27175 TUBG2 - tubulin gamma 2 17q21 CV:PGCnp
DMG:Jaffe_2016
4353 MPO - myeloperoxidase 17q23.1 CV:PGCnp
PMID:cooccur
9097 USP14 TGT 泛素特定肽酶14 18p11.32 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
596 BCL2 Bcl-2 | PPP1R50 B-cell CLL/lymphoma 2 18q21.3 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
10870 HCST DAP10 | KAP10 | PIK3AP hematopoietic cell signal transducer 19q13.1 DMG:vanEijk_2014
PMID:cooccur
84807 NFKBID IkappaBNS | TA-NFKBH NFKB inhibitor delta 19q13.12 PMID:cooccur
8993 PGLYRP1 PGLYRP | PGRP | PGRP-S | PGRPS | TAG7 | TNFSF3L peptidoglycan recognition protein 1 19q13.32 DMG:Wockner_2014
79961 DENND2D - DENN domain containing 2D 1p13.3 CV:PGCnp
DMG:vanEijk_2014
GSMA_I
51611 DPH5 AD-018 | CGI-30 | HSPC143 | NPD015 diphthamide biosynthesis 5 1p21.2 CV:PGCnp
DMG:Nishioka_2013
55283 MCOLN3 TRP-ML3 | TRPML3 mucolipin 3 1p22.3 CV:PGCnp
10741 RBBP9 BOG | RBBP10 视网膜母细胞瘤结合蛋白9 20p11.2 CV:PGCnp
GSMA_I
25939 SAMHD1 CHBL2 | DCIP | HDDC1 | MOP-5 | SBBI88 SAM domain and HD domain 1 20pter-q12 CV:PGCnp
DMG:Jaffe_2016
637 BID FP497 BH3 interacting domain death agonist 22q11.1 Expression
GO_Annotation
GSMA_I
PMID:cooccur
307 ANXA4 ANX4 | HEL-S-274 | P32.5 | PAP-II | PIG28 | PP4-X | ZAP36 annexin A4 2p13 CV:PGCnp
9448 MAP4K4 FLH21957 | HEL-S-31 | HGK | MEKKK4 | NIK mitogen-activated protein kinase kinase kinase kinase 4 2q11.2-q12 CV:PGCnp
DMG:Nishioka_2013
DNM:Guipponi_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2335 FN1 CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSF fibronectin 1 2q34 CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
1230 CCR1 CD191 | CKR-1 | CKR1 | CMKBR1 | HM145 | MIP1aR | SCYAR1 C-C motif chemokine receptor 1 3p21 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
30849 PIK3R4 VPS15 | p150 phosphoinositide-3-kinase regulatory subunit 4 3q22.1 CV:PGCnp Ascano FMRP targets
55763 EXOC1 BM-102 | SEC3 | SEC3L1 | SEC3P exocyst complex component 1 4q12 CV:PGCnp
PMID:cooccur
EXOCYTOSIS
CompositeSet
153020 RASGEF1B GPIG4 RasGEF domain family member 1B 4q21.21 CV:PGCnp
55008 HERC6 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 4q22.1 CV:GWASdb
CV:PGCnp
6932 TCF7 TCF-1 transcription factor 7 (T-cell specific, HMG-box) 5q31.1 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
2878 GPX3 GPx-P | GSHPx-3 | GSHPx-P glutathione peroxidase 3 5q33.1 CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4594 MUT MCM methylmalonyl-CoA mutase 6p12.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_IIE
PMID:cooccur
7941 PLA2G7 LDL-PLA2 | LP-PLA2 | PAFAD | PAFAH phospholipase A2 group VII 6p21.2-p12 CV:PGCnp
GSMA_IIE
PMID:cooccur
4049 LTA LT | TNFB | TNFSF1 | TNLG1E lymphotoxin alpha 6p21.3 Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
55604 LRRC16A CARMIL | CARMIL1 | CARMIL1a | LRRC16 | dJ501N12.1 | dJ501N12.5 leucine rich repeat containing 16A 6p22.2 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2162 F13A1 F13A coagulation factor XIII A chain 6p25.3-p24.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
4602 MYB Cmyb | c-myb | c-myb_CDS | efg MYB proto-oncogene, transcription factor 6q22-q23 CV:PGCnp
PMID:cooccur
4082 MARCKS 80K-L | MACS | PKCSL | PRKCSL myristoylated alanine rich protein kinase C substrate 6q22.2 CV:PGCnp
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Potential synaptic genes
23382 AHCYL2 ADOHCYASE3 | IRBIT2 adenosylhomocysteinase like 2 7q32.1 CV:PGCnp
DMG:Wockner_2014
9258 MFHAS1 LRRC65 | MASL1 malignant fibrous histiocytoma amplified sequence 1 8p23.1 CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7227 TRPS1 GC79 | LGCR transcriptional repressor GATA binding 1 8q24.12 CV:PGCnp
4609 MYC MRTL | MYCC | bHLHe39 | c-Myc v-myc avian myelocytomatosis viral oncogene homolog 8q24.21 CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
7185 TRAF1 EBI6 | MGC:10353 TNF receptor associated factor 1 9q33-q34 CV:PGCnp
PMID:cooccur
3581 IL9R CD129 | IL-9R interleukin 9 receptor Xq28 and Yq12 PMID:cooccur


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